cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AK075410 | .a | 30 to 2575 | 1 to 2547 | E206V | 2547/2547 (100 %) | 8 diff (99.7 %id) | |||
AK315427 | brain | .a | 85 to 971 | 1 to 887 | exact | 887/887 (100 %) | 3 diff (99.7 %id) | ||
AW371302 | breast | .a | 1736 to 2083 | 349 to 2 | 348/359 (96 %) | 0 diff (100 %id) | |||
AW753439 | colon | .a | 1091 to 1596 | 527 to 23 | 505/527 (95 %) | 0 diff (100 %id) | |||
BC025966 | Brain, neuroblastoma | .a | 44 to 1408 | 1 to 1365 | exact | tiling clone, available from MGC, AAA | 1365/1365 (100 %) | 1 diff (100.0 %id) | |
BG951794 | colon | .a | 1648 to 2129 | 9 to 487 | 479/490 (97 %) | 26 diff (94.7 %id) | |||
CN419181 | embryonic stem cells, cell lines H1, H7, andH9 | .a | 42 to 571 | 23 to 552 | 530/552 (96 %) | 7 diff (98.8 %id) | |||
CN419182 | embryonic stem cells, cell lines H1, H7, andH9 | .a | 112 to 222 | 1 to 111 | 111/111 (100 %) | 0 diff (100 %id) | |||
CN419183 | embryonic stem cells, cell lines H1, H7, andH9 | .a | 1029 to 1351 | 12 to 334 | 323/334 (96 %) | 6 diff (98.3 %id) | |||
CN419184 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .a | 2059 to 2257 | 1 to 199 | AAA | 199/199 (100 %) | 1 diff (99.5 %id) | ||
CN419185 | embryonic stem cells, cell lines H1, H7, andH9 | .a | 120 to 525 | 1 to 406 | 406/406 (100 %) | 0 diff (100 %id) | |||
CN419186 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .a | 694 to 1349 | 15 to 670 | 656/672 (97 %) | 4 diff (99.5 %id) | |||
CN419187 | embryonic stem cells, cell lines H1, H7, andH9 | .a | 1289 to 1848 | 12 to 571 | tiling clone, | 560/571 (98 %) | 6 diff (99.0 %id) | ||
CN419188 | embryonic stem cells, cell lines H1, H7, andH9 | .a | 88 to 376 | 1 to 289 | 289/289 (100 %) | 2 diff (99.4 %id) | |||
CN419189 | embryonic stem cells, cell lines H1, H7, andH9 | .a | 1196 to 1349 | 1 to 154 | 154/154 (100 %) | 1 diff (99.4 %id) | |||
BX440580 | brain, fetal brain | .a | 1223 to 1366 | 145 to 1 | fully sequenced, | 349/349 (100 %) | 57 diff (83.7 %id) | ||
BX440581 | brain, fetal brain | .a | 29 to 708 | 1 to 677 | fully sequenced, | 677/677 (100 %) | 10 diff (98.6 %id) | ||
BX409759 | brain, fetal brain | .a | 873 to 1127 | 1 to 255 | 255/262 (97 %) | 16 diff (93.9 %id) | |||
BX441189 | brain, fetal brain | .a | 50 to 984 | 1 to 933 | P39R V40S T44L G45A G46A ... | 933/933 (100 %) | 11 diff (98.9 %id) | ||
DQ503576 | .a | 192 to 971 | 1 to 780 | exact | 780/780 (100 %) | 0 diff (100 %id) | |||
DA483756 | brain | .a | 14 to 490 | 2 to 478 | capped | 477/477 (100 %) | 1 diff (99.8 %id) | ||
DA485333 | brain | .a | 15 to 262 | 2 to 249 | capped | 248/248 (100 %) | 2 diff (99.2 %id) | ||
DA492006 | brain | .a | 86 to 491 | 2 to 407 | capped | 406/406 (100 %) | 2 diff (99.6 %id) | ||
DA519638 | brain | .a | 25 to 211 | 2 to 188 | capped | 187/187 (100 %) | 1 diff (99.5 %id) | ||
DA525461 | brain | .a | 13 to 564 | 2 to 553 | capped | 552/552 (100 %) | 1 diff (99.9 %id) | ||
BY796380 | eye | .a | 1133 to 1674 | 1 to 542 | 542/542 (100 %) | 1 diff (99.9 %id) | |||
R61683 | whole brain | .a | 1299 to 1758 | 1 to 466 | 466/467 (99 %) | 7 diff (98.6 %id) | |||
AA193544 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .a | 1854 to 2250 | 1 to 397 | 397/397 (100 %) | 0 diff (100 %id) | |||
AI381313 | .a | 2023 to 2260 | 241 to 4 | 238/241 (98 %) | 0 diff (100 %id) | ||||
AI628573 | Kidney | .a | 2199 to 2578 | 386 to 7 | tiling clone, | 380/386 (98 %) | 0 diff (100 %id) | ||
AW129219 | Kidney, renal cell tumor | .a | 1922 to 2260 | 340 to 2 | 339/340 (99 %) | 0 diff (100 %id) | |||
BF515321 | .a | 1811 to 2263 | 3 to 455 | AAA | Submitted on the opposite strand | 453/488 (92 %) | 4 diff (99.2 %id) | ||
BE326521 | carcinoid, lung | .a | 1628 to 2180 | 1 to 553 | tiling clone, | Submitted on the opposite strand | 553/553 (100 %) | 0 diff (100 %id) | |
BE677566 | dorsal root ganglia | .a | 1857 to 2257 | 411 to 12 | AAA | 400/400 (100 %) | 1 diff (99.8 %id) | ||
BE395432 | endometrium, adenocarcinoma cell line, uterus | .a | 308 to 930 | 1 to 620 | 620/690 (89 %) | 14 diff (98.0 %id) | |||
BE889461 | leiomyosarcoma, uterus | .a | 313 to 1016 | 1 to 708 | 708/1131 (62 %) | 21 diff (98.2 %id) | |||
BI199012 | brain, neuroblastoma | .a | 43 to 974 | 1 to 932 | R133P C135V A136R K138Q K139E ... | 932/932 (100 %) | 24 diff (97.5 %id) | ||
BI198798 | brain, neuroblastoma | .a | 43 to 757 | 1 to 722 | 722/766 (94 %) | 52 diff (93.3 %id) | |||
BI913654 | brain | .a | 43 to 805 | 1 to 755 | 755/755 (100 %) | 13 diff (98.3 %id) | |||
BI919084 | brain | .a | 50 to 786 | 1 to 735 | 735/738 (99 %) | 16 diff (97.9 %id) | |||
BI861803 | breast, mammary adenocarcinoma, cell line | .a | 288 to 980 | 1 to 690 | 690/690 (100 %) | 3 diff (99.6 %id) | |||
BM927966 | brain | .a | 34 to 844 | 1 to 817 | 817/1136 (71 %) | 28 diff (97.6 %id) | |||
BU552733 | ovary, teratocarcinoma, cell line | .a | 49 to 604 | 1 to 564 | 564/1061 (53 %) | 30 diff (97.2 %id) | |||
BU845089 | ovary, teratocarcinoma, cell line | .a | 42 to 557 | 32 to 550 | 519/1211 (42 %) | 21 diff (98.3 %id) | |||
BU845963 | ovary, teratocarcinoma, cell line | .a | 48 to 848 | 1 to 814 | 814/956 (85 %) | 24 diff (97.5 %id) | |||
BU854965 | ovary, teratocarcinoma, cell line | .a | 50 to 833 | 8 to 796 | 789/967 (81 %) | 20 diff (98.0 %id) | |||
BU859249 | ovary, teratocarcinoma, cell line | .a | 49 to 661 | 1 to 616 | 616/1132 (54 %) | 13 diff (98.9 %id) | |||
CX866740 | embryonic stem | .a | 2213 to 2575 | 392 to 30 | AAA | 363/363 (100 %) | 10 diff (97.3 %id) | ||
CX866820 | embryonic stem | .a | 1026 to 1687 | 1 to 661 | 661/661 (100 %) | 4 diff (99.4 %id) | |||
CX868542 | embryonic stem | .a | 839 to 1402 | 589 to 26 | fully sequenced, AAA | 564/564 (100 %) | 1 diff (99.9 %id) | ||
CX868610 | embryonic stem | .a | 59 to 869 | 1 to 811 | fully sequenced, | 811/811 (100 %) | 2 diff (99.8 %id) | ||
CX869943 | embryonic stem | .a | 45 to 705 | 1 to 661 | 661/661 (100 %) | 2 diff (99.7 %id) | |||
CX873311 | embryonic stem | .a | 57 to 525 | 1 to 469 | 469/469 (100 %) | 0 diff (100 %id) | |||
CX873491 | embryonic stem | .a | 45 to 842 | 1 to 798 | 798/798 (100 %) | 3 diff (99.7 %id) | |||
CX756685 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 44 to 470 | 1 to 427 | Submitted on the opposite strand | 427/702 (60 %) | 9 diff (98.8 %id) | ||
CX756346 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 43 to 756 | 1 to 713 | Submitted on the opposite strand | 713/716 (99 %) | 9 diff (98.8 %id) | ||
DR759872 | embryonic stem | .a | 1 to 726 | 1 to 725 | tiling clone, | 725/725 (100 %) | 1 diff (99.9 %id) | ||
DR761270 | embryonic stem | .a | 70 to 719 | 1 to 650 | 650/650 (100 %) | 0 diff (100 %id) | |||
DR762269 | embryonic stem | .a | 57 to 861 | 1 to 805 | 805/805 (100 %) | 1 diff (99.9 %id) | |||
CX865440 | embryonic stem | .a | 1010 to 1648 | 1 to 638 | 638/638 (100 %) | 3 diff (99.6 %id) | |||
TI_57241417 | .a | 43 to 805 | 38 to 792 | 755/792 (95 %) | 19 diff (97.7 %id) | ||||
TI_57241999 | .a | 50 to 786 | 1 to 735 | 735/738 (99 %) | 16 diff (97.9 %id) | ||||
TI_57191306 | .a | 286 to 980 | 48 to 739 | 692/692 (100 %) | 3 diff (99.6 %id) | ||||
DA678786 | .a | 29 to 331 | 2 to 301 | capped | 300/300 (100 %) | 2 diff (99.4 %id) | |||
NM_152429.4 | .a | 13 to 2576 | 1 to 2564 | exact | RefSeq, | 2564/2564 (100 %) | 0 diff (100 %id) | ||
DA698325 | .a | 14 to 540 | 2 to 528 | capped | 527/527 (100 %) | 0 diff (100 %id) | |||
DA719739 | .a | 33 to 581 | 2 to 551 | capped | 550/550 (100 %) | 1 diff (99.9 %id) | |||
DA733514 | .a | 30 to 414 | 2 to 386 | capped | 385/387 (99 %) | 3 diff (99.3 %id) | |||
DB365434 | .a | 1988 to 2575 | 586 to 1 | 586/587 (99 %) | 20 diff (96.6 %id) | ||||
DA735519 | .a | 28 to 716 | 2 to 694 | capped | 693/844 (82 %) | 8 diff (99.1 %id) | |||
DB367808 | .a | 1695 to 2257 | 560 to 1 | 560/562 (99 %) | 10 diff (98.3 %id) | ||||
DA785496 | brain | .a | 45 to 416 | 2 to 373 | capped | 372/372 (100 %) | 0 diff (100 %id) | ||
CT000062 | T-Lymphocytes | .a | 370 to 714 | 1 to 345 | 345/345 (100 %) | 0 diff (100 %id) | |||
DB056580 | testis | .a | 249 to 623 | 2 to 379 | capped | 378/378 (100 %) | 3 diff (99.3 %id) | ||
TI_154130787 | .a | 1772 to 2575 | 878 to 84 | tiling clone, AAA | 795/910 (87 %) | 17 diff (98.2 %id) | |||
CA419224 | Chondrosarcoma Grade II, Left Pelvis | .a | 1918 to 2575 | 676 to 19 | AAA | 658/658 (100 %) | 0 diff (100 %id) | ||
BP383652 | .a | 29 to 413 | 1 to 385 | 385/390 (98 %) | 2 diff (99.5 %id) | ||||
DR762269 | embryonic stem | .a | 57 to 861 | 1 to 805 | 805/805 (100 %) | 1 diff (99.9 %id) | |||
CX865440 | embryonic stem | .a | 1010 to 1648 | 1 to 638 | 638/638 (100 %) | 3 diff (99.6 %id) | |||
TI_57241417 | INCYTE_603180252 | FGFBP3.aAug10 | 805 | 792 | INCYTE_603180252 | 755 | 19 | ||
TI_57241999 | INCYTE_603181014 | FGFBP3.aAug10 | 786 | 735 | INCYTE_603181014 | 735 | 16 | ||
TI_57191306 | INCYTE_603388823 | FGFBP3.aAug10 | 980 | 739 | INCYTE_603388823 | 692 | 3 | ||
DA678786 | NHNPC2000819 | FGFBP3.aAug10 | 331 | 301 | NHNPC2000819 | 300 | 2 | ||
NM_152429.4 | NM_152429 | FGFBP3.aAug10 | 2576 | 2564 | NM_152429 | 2564 | 0 | ||
DA698325 | NT2RI2000138 | FGFBP3.aAug10 | 540 | 528 | NT2RI2000138 | 527 | 0 | ||
DA719739 | NT2RI2028407 | FGFBP3.aAug10 | 581 | 551 | NT2RI2028407 | 550 | 1 | ||
DA733514 | NT2RP2003115 | FGFBP3.aAug10 | 414 | 386 | NT2RP2003115 | 385 | 3 | ||
DB365434 | NT2RP2003115 | FGFBP3.aAug10 | 2575 | 1 | NT2RP2003115 | 586 | 20 | ||
DA735519 | NT2RP3001183 | FGFBP3.aAug10 | 716 | 694 | NT2RP3001183 | 693 | 8 | ||
DB367808 | NT2RP3001183 | FGFBP3.aAug10 | 2257 | 1 | NT2RP3001183 | 560 | 10 | ||
DA785496 | OCBBF2022206 | FGFBP3.aAug10 | 416 | 373 | OCBBF2022206 | 372 | 0 | ||
CT000062 | RZPDp9016D1925 | FGFBP3.aAug10 | 714 | 345 | RZPDp9016D1925 | 345 | 0 | ||
DB056580 | TESTI2048316 | FGFBP3.aAug10 | 623 | 379 | TESTI2048316 | 378 | 3 | ||
TI_154130787 | TI_154130787 | FGFBP3.aAug10 | 2575 | 84 | TI_154130787 | 795 | 17 | ||
CA419224 | UI-H-EZ1-bcb-j-24-0-UI | FGFBP3.aAug10 | 2575 | 19 | UI-H-EZ1-bcb-j-24-0-UI | 658 | 0 | ||
CA419224 | UI-H-EZ1-bcb-j-24-0-UI | FGFBP3.aAug10 | 2575 | 19 | UI-H-EZ1-bcb-j-24-0-UI | 658 | 0 | ||
BP383652 | w873 | FGFBP3.aAug10 | 413 | 385 | w873 | 385 | 2 |