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Gene BTF3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
535 supporting clones for gene BTF3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001037637.1   .a 1 to 1249 1 to 1249 exact RefSeq, AAA   1249/1249
(100 %)
0 diff
(100 %id)
BJ992497 hepatoblastoma .a 7 to 460 1 to 454   tiling clone,   454/454
(100 %)
0 diff
(100 %id)
BI600672 brain, hypothalamus .a 14 to 817 1 to 818       818/820
(99 %)
31 diff
(96.3 %id)
FN140021 breast carcinoma .a 15 to 97 1 to 81       81/81
(100 %)
7 diff
(91.4 %id)
FN154474 breast carcinoma .a 15 to 93 1 to 81       81/81
(100 %)
6 diff
(92.6 %id)
FN170360 breast carcinoma .a 16 to 82 1 to 66       66/68
(97 %)
4 diff
(94.2 %id)
AL036614 brain .a 18 to 374 1 to 360       360/388
(92 %)
11 diff
(97.2 %id)
FN056313 breast carcinoma .a 18 to 104 87 to 1     Submitted on the opposite strand 87/88
(98 %)
0 diff
(100 %id)
BI199552 brain, neuroblastoma .a 18 to 705 1 to 700       700/915
(76 %)
29 diff
(96.9 %id)
BP317488 pericardium .a 18 to 600 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
TI_45212847   .a 19 to 817 126 to 938       813/940
(86 %)
28 diff
(97.1 %id)
BM759155 lymph node, stomach .a 21 to 224 7 to 210       204/210
(97 %)
7 diff
(96.7 %id)
BM761725 lymph node, stomach .a 21 to 373 7 to 359       353/359
(98 %)
6 diff
(98.4 %id)
BM844368 lymph node, stomach .a 21 to 297 8 to 283       276/283
(97 %)
9 diff
(96.9 %id)
DA897626 skeletal muscle .a 21 to 568 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
BM791196 stomach .a 25 to 723 1 to 699       699/699
(100 %)
0 diff
(100 %id)
DB498476 hypothalamus .a 27 to 538 1 to 511       511/511
(100 %)
1 diff
(99.9 %id)
CN419771 embryonic stem cells, cell lines H1, H7, andH9 .a 28 to 791 1 to 764       764/764
(100 %)
1 diff
(99.9 %id)
CR992369 T-Lymphocytes .a 28 to 652 1 to 628       628/628
(100 %)
3 diff
(99.6 %id)
BG574273 breast, mammary adenocarcinoma, cell line .a 29 to 593 1 to 564       564/564
(100 %)
2 diff
(99.7 %id)
BE272094 adenocarcinoma cell line, ovary .a 30 to 646 24 to 641       618/641
(96 %)
8 diff
(98.8 %id)
BF669205 brain, primitive neuroectoderm .a 30 to 542 11 to 288       273/288
(94 %)
7 diff
(97.6 %id)
AA356951   .a 31 to 241 1 to 211       211/211
(100 %)
0 diff
(100 %id)
BX404426 neuroblastoma .a 31 to 980 1 to 949 P23X S30F Q44H D84E G102C ...     949/949
(100 %)
14 diff
(98.6 %id)
BX428726 neuroblastoma .a 31 to 1102 1 to 1058 D175G G176W A178S P179T L180T ...     1058/1068
(99 %)
27 diff
(97.5 %id)
BM547029 brain, hippocampus .a 31 to 1028 11 to 1013 K171Q P191S K202Q A205G     1003/1070
(93 %)
43 diff
(96.0 %id)
BG685263 B-cells, primary B-cells from tonsils (cell line) .a 32 to 643 1 to 638       519/638
(81 %)
19 diff
(97.1 %id)
BI259946 cervical carcinoma cell line, cervix .a 32 to 897 1 to 868 G20A G21A C22A P23L G25A ...     868/869
(99 %)
31 diff
(96.5 %id)
AA343658 gall bladder .a 33 to 194 1 to 162       162/162
(100 %)
0 diff
(100 %id)
CN419766 embryonic stem cells, cell lines H1, H7, andH9 .a 33 to 700 12 to 679       668/679
(98 %)
6 diff
(99.2 %id)
BM553950 amelanotic melanoma, cell line, skin .a 33 to 948 27 to 959 N152X D175G G176W A178S P179T ...     931/1048
(88 %)
34 diff
(96.8 %id)
CX788127 human embryonic stem cells .a 33 to 871 1 to 839 exact     839/839
(100 %)
0 diff
(100 %id)
DN989948 brain, whole brain .a 33 to 630 8 to 605       598/605
(98 %)
7 diff
(98.9 %id)
AW965068   .a 34 to 250 1 to 217       217/345
(62 %)
5 diff
(98.6 %id)
BI086411 cervix .a 34 to 763 1 to 748       748/846
(88 %)
40 diff
(95.3 %id)
BM562704 astrocytoma grade IV, cell line, brain .a 34 to 1010 1 to 987 E184R K202R N203M E204X A205Q ...     987/1051
(93 %)
26 diff
(97.6 %id)
BU187245 eye, retinoblastoma .a 34 to 810 1 to 792       792/884
(89 %)
14 diff
(98.5 %id)
TI_57175464   .a 34 to 800 106 to 876       771/876
(88 %)
14 diff
(98.5 %id)
BI831859 brain, medulla .a 35 to 800 1 to 770       770/770
(100 %)
9 diff
(98.9 %id)
BM809088 amelanotic melanoma, cell line, skin .a 35 to 813 1 to 784       784/997
(78 %)
14 diff
(98.6 %id)
CN419769 embryonic stem cells, cell lines H1, H7, andH9 .a 36 to 738 1 to 703       703/703
(100 %)
2 diff
(99.8 %id)
CB043903 colon, juvenile granulosa tumor .a 36 to 639 29 to 632   fully sequenced,   604/632
(95 %)
6 diff
(99.1 %id)
TI_151773959   .a 36 to 719 107 to 795       689/689
(100 %)
23 diff
(96.7 %id)
CN419767 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 37 to 788 1 to 751       751/751
(100 %)
5 diff
(99.4 %id)
AA121325 brain, neuroepithelial cells .a 38 to 615 1 to 579       577/582
(99 %)
17 diff
(97.1 %id)
BU949668 Pancreas, Purified pancreatic islet .a 38 to 654 1 to 617     Submitted on the opposite strand 617/617
(100 %)
1 diff
(99.9 %id)
BU161256 melanotic melanoma, skin .a 38 to 909 1 to 884 K171Q D175G G176W A178N P179T ...     885/884
(100 %)
21 diff
(97.7 %id)
BQ924140 brain, neuroblastoma, cell line .a 38 to 813 13 to 791       779/943
(82 %)
14 diff
(98.6 %id)
CD240127   .a 40 to 989 55 to 781       669/1001
(66 %)
46 diff
(95.5 %id)
BX332577 Neuroblastoma Cot 25-normalized .a 43 to 1026 1 to 983 T28X P32X P43X E53R L55T ... fully sequenced,   983/983
(100 %)
4 diff
(99.6 %id)
AA159879 Pancreas .a 44 to 310 1 to 266       266/277
(96 %)
12 diff
(95.7 %id)
AA243003 brain, neuroepithelial cells .a 44 to 448 1 to 404       404/419
(96 %)
40 diff
(90.5 %id)
BU859932 adenocarcinoma, cell line, breast .a 44 to 962 1 to 938 V77G L162F R163K R164G L165D ...     936/941
(99 %)
28 diff
(97.1 %id)
BX359146.
matches multiple genes
Placenta Cot 25-normalized .a 45 to 1110 1064 to 1 exact   also hits gene BTF3P4 1064/1064
(100 %)
12 diff
(98.9 %id)
AA115714 colon, tumor .a 45 to 467 1 to 425       425/438
(97 %)
12 diff
(97.3 %id)
BQ954132 eye, normal pigmented retinal epithelium .a 45 to 919 1 to 884 K93X T114N V115S I116D H117P ...     884/886
(99 %)
24 diff
(97.3 %id)
AA143623 Pancreas .a 46 to 339 1 to 294       294/294
(100 %)
9 diff
(97.0 %id)
TI_59382148   .a 48 to 552 110 to 620       511/746
(68 %)
22 diff
(97.1 %id)
BE905515 epithelioid carcinoma, Pancreas .a 49 to 768 1 to 711       711/922
(77 %)
14 diff
(98.5 %id)
BX428725 neuroblastoma .a 50 to 1081 1042 to 12 T4X D11Y G40E K87T     1031/1048
(98 %)
22 diff
(98.0 %id)
BQ638806 eye, retina .a 50 to 557 1 to 508       508/508
(100 %)
6 diff
(98.9 %id)
DR007144 Spleen .a 52 to 805 11 to 762       752/762
(98 %)
7 diff
(99.1 %id)
CN419759 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 53 to 504 1 to 452       452/452
(100 %)
4 diff
(99.2 %id)
BE872805 adenocarcinoma, colon .a 53 to 763 1 to 707       707/917
(77 %)
19 diff
(98.0 %id)
BX326078 Neuroblastoma Cot 25-normalized .a 54 to 758 704 to 1       704/704
(100 %)
7 diff
(99.1 %id)
BX343502 Neuroblastoma Cot 25-normalized .a 54 to 516 1 to 452       457/484
(94 %)
18 diff
(96.3 %id)
BX346630 Neuroblastoma Cot 25-normalized .a 54 to 594 1 to 541       541/541
(100 %)
0 diff
(100 %id)
BG910184 anaplastic oligodendroglioma with 1p/19qloss, brain .a 54 to 926 1 to 868 R2L R3T T4D G5R A6R ...     870/868
(100 %)
19 diff
(97.9 %id)
BU603357 mixed (pool of 40 RNAs) .a 55 to 813 1 to 764       764/830
(92 %)
16 diff
(98.1 %id)
CN419752 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 56 to 607 1 to 553       553/553
(100 %)
4 diff
(99.3 %id)
CA407334 adipose .a 58 to 648 1 to 591       591/591
(100 %)
9 diff
(98.5 %id)
CT002104 T-Lymphocytes .a 58 to 1003 1 to 943 exact     943/947
(99 %)
7 diff
(99.3 %id)
BG750012 eye, normal pigmented retinal epithelium .a 60 to 1007 1 to 946 G20A G21A C22A P23L G25A ...     946/1055
(89 %)
33 diff
(96.9 %id)
BI198556 brain, neuroblastoma .a 60 to 653 1 to 594       594/594
(100 %)
2 diff
(99.7 %id)
BM796914 Ascites, stomach .a 61 to 450 1 to 390       390/390
(100 %)
4 diff
(99.0 %id)
BX394787 Neuroblastoma Cot 25-normalized .a 62 to 1049 985 to 1 D11H G21S G40E D85X F109X ...     985/988
(99 %)
30 diff
(97.0 %id)
BG027463 Bone, osteosarcoma, cell line .a 62 to 760 1 to 693       693/832
(83 %)
21 diff
(97.5 %id)
BQ220398 melanotic melanoma, skin .a 62 to 630 1 to 574       574/1000
(57 %)
14 diff
(98.6 %id)
CB132591 Liver .a 63 to 723 1 to 661       661/661
(100 %)
4 diff
(99.4 %id)
CN419736 embryonic stem cells, cell lines H1, H7, andH9 .a 75 to 698 1 to 624       624/624
(100 %)
1 diff
(99.9 %id)
BE799636 lung, small cell carcinoma .a 75 to 848 56 to 838       783/975
(80 %)
35 diff
(96.5 %id)
BE394511 endometrium, adenocarcinoma cell line, uterus .a 80 to 616 1 to 543       539/543
(99 %)
22 diff
(96.0 %id)
BU176970 melanotic melanoma, skin .a 83 to 929 1 to 853 E184K E195G N196E D198*     853/857
(99 %)
14 diff
(98.4 %id)
AW239507 lung, cell line .a 89 to 710 1 to 622       622/622
(100 %)
1 diff
(99.9 %id)
BF337413 brain, glioblastoma with EGFR amplification .a 107 to 814 39 to 744       706/751
(94 %)
13 diff
(98.3 %id)
X53280   .a 111 to 1075 1 to 966 exact     966/979
(98 %)
4 diff
(99.6 %id)
BP259326 heart .a 120 to 703 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BX279963 embryonal carcinoma, cell line, testis .a 150 to 630 1 to 481       481/481
(100 %)
0 diff
(100 %id)
BX429192 neuroblastoma .a 150 to 1019 1 to 861 P179H A181L T182L G183E E184R ...     861/861
(100 %)
21 diff
(97.6 %id)
BQ433988 embryonal carcinoma, cell line, testis .a 152 to 1045 1 to 902 D192N K202R N203M E204R A205Q ...     902/902
(100 %)
20 diff
(97.8 %id)
TI_227713502   .a 158 to 1122 1011 to 61 R3T T4R G5S P7D A8S ... AAA   951/1005
(94 %)
25 diff
(97.6 %id)
BG033421 breast, mammary adenocarcinoma, cell line .a 162 to 942 1 to 792 K46N E47R T48N I49N M50H ...     792/1105
(71 %)
36 diff
(96.8 %id)
CN419741 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 169 to 810 20 to 661       642/661
(97 %)
6 diff
(99.1 %id)
BX329630 Neuroblastoma Cot 25-normalized .a 212 to 1118 904 to 1 D11A A18G P23L G25A E26R ...     904/907
(99 %)
16 diff
(98.3 %id)
BM686842 eye, eye anterior segment .a 213 to 718 1 to 506   fully sequenced,   506/506
(100 %)
5 diff
(99.1 %id)
BQ431169 melanotic melanoma, skin .a 240 to 993 38 to 803 E204X     766/886
(86 %)
19 diff
(97.9 %id)
BP418198 small intestine .a 244 to 738 1 to 495     Submitted on the opposite strand 495/495
(100 %)
3 diff
(99.4 %id)
CN419738 embryonic stem cells, DMSO-treated H9 cellline .a 334 to 758 230 to 654       425/654
(64 %)
7 diff
(99.0 %id)
TI_149294028   .a 366 to 1120 842 to 88   tiling clone, AAA   755/964
(78 %)
8 diff
(99.2 %id)
TI_149303622   .a 366 to 1120 833 to 79   AAA   755/1001
(75 %)
33 diff
(96.8 %id)
TI_227712670   .a 366 to 1120 832 to 78   AAA   755/966
(78 %)
10 diff
(99.0 %id)
BE768896 prostate_tumor .a 374 to 760 11 to 400       390/413
(94 %)
39 diff
(90.6 %id)
BE906262 epithelioid carcinoma, Pancreas .a 374 to 1114 743 to 1     Submitted on the opposite strand 743/831
(89 %)
29 diff
(96.6 %id)
TI_149299244   .a 374 to 1120 837 to 94   AAA   744/797
(93 %)
18 diff
(97.8 %id)
TI_227712401   .a 374 to 1120 822 to 80   AAA   743/974
(76 %)
11 diff
(98.9 %id)
TI_154062768   .a 375 to 1120 840 to 100   AAA   741/1036
(71 %)
5 diff
(99.6 %id)
BT007120   .a 376 to 862 1 to 487       487/489
(99 %)
1 diff
(99.8 %id)
BU156092 melanotic melanoma, skin .a 376 to 1120 775 to 28   AAA Submitted on the opposite strand 748/866
(86 %)
3 diff
(99.7 %id)
TI_1948143906   .a 376 to 863 128 to 615       488/1475
(33 %)
13 diff
(99.2 %id)
BM970003 lung .a 376 to 1120 762 to 19   AAA   744/744
(100 %)
1 diff
(99.9 %id)
CB528908 Aveolar Macrophage, lung .a 376 to 1120 763 to 19   AAA   745/745
(100 %)
1 diff
(99.9 %id)
BE622867 melanotic melanoma, skin .a 378 to 1067 705 to 2       704/801
(87 %)
23 diff
(97.2 %id)
TI_154101442   .a 384 to 1120 820 to 88   AAA   728/799
(91 %)
13 diff
(98.4 %id)
TI_227715113   .a 388 to 1120 816 to 92   AAA   725/929
(78 %)
8 diff
(99.2 %id)
BM975932 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 395 to 1120 743 to 19   AAA   725/725
(100 %)
1 diff
(99.9 %id)
BU627968 Bone, Enchondroma cell line .a 395 to 1120 744 to 19   AAA   726/726
(100 %)
0 diff
(100 %id)
CB528987 Aveolar Macrophage, lung .a 395 to 1120 743 to 19   AAA   725/725
(100 %)
1 diff
(99.9 %id)
BM975790 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 397 to 1120 742 to 19   AAA   724/724
(100 %)
0 diff
(100 %id)
TI_154091187   .a 399 to 1120 808 to 88   AAA   721/889
(81 %)
4 diff
(99.6 %id)
BU682851 lung .a 399 to 1120 740 to 19   AAA   722/722
(100 %)
0 diff
(100 %id)
BF928573 nervous_tumor .a 400 to 786 394 to 1     Submitted on the opposite strand 400/394
(101 %)
11 diff
(97.3 %id)
BI015323 lung_tumor .a 400 to 763 402 to 39       364/402
(90 %)
2 diff
(99.6 %id)
BI031024 marrow .a 400 to 796 400 to 5       396/400
(99 %)
3 diff
(99.3 %id)
BI056034 placenta_normal .a 400 to 763 380 to 21       363/380
(95 %)
0 diff
(100 %id)
CB529262 Aveolar Macrophage, lung .a 401 to 1120 737 to 19   AAA   719/719
(100 %)
3 diff
(99.6 %id)
BM854778 Ascites, stomach .a 405 to 1066 1 to 662       662/662
(100 %)
0 diff
(100 %id)
BU627225 Bone, Enchondroma cell line .a 406 to 1120 732 to 19   AAA   714/714
(100 %)
1 diff
(99.9 %id)
CA421267 Bone, Enchondroma cell line .a 406 to 1120 730 to 19   AAA   712/712
(100 %)
2 diff
(99.8 %id)
CA420727 Bone, Enchondroma cell line .a 407 to 1120 731 to 19   AAA   713/713
(100 %)
1 diff
(99.9 %id)
CA422383 cell lines, Chondrosarcoma .a 407 to 1120 726 to 19   AAA   708/708
(100 %)
6 diff
(99.2 %id)
CD364481 Alveolar Macrophage, lung .a 407 to 1122 731 to 16   AAA   716/716
(100 %)
1 diff
(99.9 %id)
AW805052 uterus .a 408 to 615 216 to 4       211/216
(97 %)
4 diff
(98.2 %id)
BQ000604 Fibrosarcoma .a 408 to 1120 728 to 19   AAA   710/710
(100 %)
4 diff
(99.5 %id)
CD365529 Alveolar Macrophage, lung .a 408 to 1120 728 to 19   AAA   710/710
(100 %)
3 diff
(99.6 %id)
CD365608 Alveolar Macrophage, lung .a 408 to 1120 725 to 19   AAA   707/707
(100 %)
6 diff
(99.2 %id)
CA946292 eye, lacrimal gland .a 409 to 680 272 to 1     Submitted on the opposite strand 272/272
(100 %)
1 diff
(99.7 %id)
CA412435 Chondrosarcoma Grade II, Left Pelvis .a 409 to 1120 730 to 19   AAA   712/712
(100 %)
0 diff
(100 %id)
BU631547 cell lines, Chondrosarcoma .a 409 to 1120 729 to 19   AAA   711/711
(100 %)
1 diff
(99.9 %id)
CD367357 Alveolar Macrophage, lung .a 409 to 1120 730 to 19   AAA   712/712
(100 %)
0 diff
(100 %id)
TI_149277542   .a 410 to 1120 804 to 94   AAA   711/711
(100 %)
2 diff
(99.8 %id)
CD366391 Alveolar Macrophage, lung .a 410 to 1120 723 to 19   AAA   705/705
(100 %)
5 diff
(99.3 %id)
BQ018047 Fibrosarcoma .a 415 to 1120 722 to 19   AAA   704/704
(100 %)
2 diff
(99.8 %id)
BE090642 breast .a 416 to 938 527 to 10     Submitted on the opposite strand 518/527
(98 %)
6 diff
(98.9 %id)
BE090657 breast .a 416 to 1001 609 to 25     Submitted on the opposite strand 585/609
(96 %)
6 diff
(99.1 %id)
BE090672 breast .a 416 to 1001 596 to 13     Submitted on the opposite strand 584/596
(97 %)
1 diff
(99.9 %id)
TI_149292797   .a 417 to 1120 788 to 86   AAA   703/703
(100 %)
2 diff
(99.8 %id)
TI_149294400   .a 421 to 1120 779 to 83   AAA   697/701
(99 %)
2 diff
(99.8 %id)
BG184235   .a 438 to 1113 45 to 721       673/848
(79 %)
53 diff
(93.8 %id)
BG210692   .a 438 to 1123 38 to 720       679/849
(79 %)
30 diff
(96.5 %id)
BG212776   .a 439 to 1116 3 to 681       675/689
(97 %)
26 diff
(96.3 %id)
AW904685 nervous_normal .a 442 to 600 158 to 2       157/158
(99 %)
0 diff
(100 %id)
TI_154131982   .a 443 to 1120 795 to 119   AAA   677/727
(93 %)
9 diff
(98.8 %id)
TI_154132840   .a 443 to 1120 776 to 99   AAA   678/824
(82 %)
4 diff
(99.6 %id)
TI_154133761   .a 443 to 1120 775 to 101   AAA   675/1151
(58 %)
27 diff
(97.7 %id)
CB150930 cervix, Uterine .a 445 to 1034 590 to 1     Submitted on the opposite strand 590/590
(100 %)
4 diff
(99.4 %id)
CV355979 marrow .a 445 to 668 236 to 11     Submitted on the opposite strand 226/236
(95 %)
11 diff
(95.4 %id)
TI_57244604   .a 445 to 1125 37 to 719       679/837
(81 %)
17 diff
(98.0 %id)
TI_154018822   .a 445 to 1120 760 to 86   AAA   675/705
(95 %)
13 diff
(98.2 %id)
TI_154133437   .a 445 to 1120 780 to 106   AAA   675/834
(80 %)
7 diff
(99.2 %id)
BM976183 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 445 to 1120 694 to 19   AAA   676/677
(99 %)
0 diff
(100 %id)
BQ574029 Chondrosarcoma Grade II, Left Pelvis .a 445 to 1120 693 to 19   AAA   675/712
(94 %)
2 diff
(99.8 %id)
BU628844 cell lines, Chondrosarcoma .a 445 to 1120 692 to 19   AAA   674/693
(97 %)
2 diff
(99.8 %id)
TI_149281814   .a 446 to 1120 772 to 99   AAA   674/691
(97 %)
2 diff
(99.8 %id)
BU683177 lung .a 449 to 1120 689 to 18   AAA   672/672
(100 %)
0 diff
(100 %id)
BQ045341 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 449 to 1120 690 to 19   AAA   672/672
(100 %)
0 diff
(100 %id)
CA413736 Chondrosarcoma Grade II, Left Pelvis .a 449 to 1120 689 to 19   AAA   671/671
(100 %)
1 diff
(99.9 %id)
CA415506 Chondrosarcoma Grade II, Left Pelvis .a 449 to 1120 690 to 19   AAA   672/672
(100 %)
0 diff
(100 %id)
BQ773000 Chondrosarcoma Cell line .a 449 to 1120 689 to 19   AAA   671/671
(100 %)
1 diff
(99.9 %id)
CA421623 Bone, Enchondroma cell line .a 449 to 1124 693 to 19   AAA   675/675
(100 %)
1 diff
(99.9 %id)
BQ772725 Chondrosarcoma Cell line .a 450 to 1120 688 to 19   AAA   670/670
(100 %)
1 diff
(99.9 %id)
BU629561 cell lines, Chondrosarcoma .a 450 to 1120 687 to 19   AAA   669/669
(100 %)
2 diff
(99.8 %id)
BU678360 lung .a 452 to 1120 684 to 19   AAA   666/666
(100 %)
2 diff
(99.7 %id)
BM974177 lung .a 452 to 1120 687 to 19   AAA   669/669
(100 %)
0 diff
(100 %id)
BY994900   .a 453 to 1120 706 to 39   AAA Submitted on the opposite strand 668/668
(100 %)
0 diff
(100 %id)
CD367112 Alveolar Macrophage, lung .a 453 to 1120 686 to 19   AAA   668/668
(100 %)
2 diff
(99.8 %id)
BU631609 cell lines, Chondrosarcoma .a 456 to 1120 682 to 19   AAA   664/664
(100 %)
1 diff
(99.9 %id)
TI_57193087   .a 465 to 1114 58 to 710       653/760
(85 %)
8 diff
(99.0 %id)
BE090645 breast .a 470 to 1001 544 to 17     Submitted on the opposite strand 528/544
(97 %)
4 diff
(99.3 %id)
EC465684 Prostate .a 470 to 581 1 to 107       107/108
(99 %)
6 diff
(94.5 %id)
BU627195 Bone, Enchondroma cell line .a 475 to 1120 664 to 19   AAA   646/646
(100 %)
0 diff
(100 %id)
BU581233 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .a 481 to 1121 641 to 1       641/641
(100 %)
0 diff
(100 %id)
BQ359908 head_normal .a 482 to 653 1 to 173       173/176
(98 %)
7 diff
(96.1 %id)
BF885564 testis_normal .a 483 to 983 507 to 5     Submitted on the opposite strand 503/511
(98 %)
7 diff
(98.7 %id)
AA010850 heart .a 490 to 977 1 to 511       511/512
(99 %)
29 diff
(94.4 %id)
TI_154122501   .a 490 to 1120 730 to 100   AAA   631/969
(65 %)
0 diff
(100 %id)
BQ000433 Fibrosarcoma .a 508 to 1120 631 to 19   AAA   613/614
(99 %)
5 diff
(99.2 %id)
BX346629 Neuroblastoma Cot 25-normalized .a 509 to 1109 601 to 1       601/601
(100 %)
7 diff
(98.9 %id)
BU186353 embryonal carcinoma, cell line, testis .a 516 to 1121 38 to 646       605/648
(93 %)
7 diff
(99.0 %id)
CN479891 Knee, Osteoarthritic Cartilage .a 518 to 1120 621 to 19   AAA   603/603
(100 %)
0 diff
(100 %id)
BE932248 head_neck .a 521 to 993 485 to 13       473/485
(97 %)
0 diff
(100 %id)
AW891552 nervous_tumor .a 536 to 809 289 to 17       273/297
(91 %)
0 diff
(100 %id)
BE765102 nervous_tumor .a 536 to 809 274 to 1       274/291
(94 %)
0 diff
(100 %id)
AA582728 colon, tumor .a 536 to 1115 580 to 1       580/580
(100 %)
0 diff
(100 %id)
TI_157594320   .a 539 to 1120 666 to 81   AAA   586/596
(98 %)
16 diff
(97.4 %id)
BE709934 head_neck .a 544 to 1062 518 to 1       518/518
(100 %)
2 diff
(99.7 %id)
TI_149283175   .a 546 to 1120 597 to 26   AAA   572/814
(70 %)
25 diff
(97.0 %id)
TI_154133770   .a 546 to 1120 680 to 104   AAA   577/1105
(52 %)
15 diff
(98.7 %id)
TI_149276860   .a 549 to 1120 666 to 99   AAA   568/569
(99 %)
4 diff
(99.3 %id)
TI_149275607   .a 552 to 1120 653 to 85   AAA   569/1015
(56 %)
0 diff
(100 %id)
BM968793 lung, Primary Lung Epithelial Cells .a 552 to 1120 587 to 19   AAA   569/577
(98 %)
0 diff
(100 %id)
BE963944 large cell carcinoma, lung .a 554 to 1120 586 to 16   AAA   571/749
(76 %)
22 diff
(97.1 %id)
BP340058 Spleen .a 555 to 1120 1 to 566   AAA   566/566
(100 %)
0 diff
(100 %id)
TI_57191694   .a 556 to 1120 54 to 618   AAA   565/565
(100 %)
1 diff
(99.9 %id)
BF313727 brain, neuroblastoma .a 558 to 1120 613 to 33   AAA Submitted on the opposite strand 580/582
(99 %)
48 diff
(91.8 %id)
TI_154132000   .a 558 to 1120 707 to 144   AAA   564/759
(74 %)
35 diff
(95.4 %id)
BM314061 insulinoma, Pancreas .a 559 to 1120 588 to 27   AAA Submitted on the opposite strand 562/562
(100 %)
2 diff
(99.7 %id)
BM702728 eye, Retina Foveal and Macular .a 566 to 1120 1 to 555   fully sequenced, AAA   555/555
(100 %)
0 diff
(100 %id)
TI_154192519   .a 571 to 1120 63 to 612   AAA   550/550
(100 %)
1 diff
(99.9 %id)
CK820742 Pancreas, Purified pancreatic islet .a 572 to 1120 566 to 18   AAA Submitted on the opposite strand 549/550
(99 %)
0 diff
(100 %id)
BE927876 colon .a 575 to 820 246 to 1       246/246
(100 %)
1 diff
(99.6 %id)
BJ992498 hepatoblastoma .a 577 to 1085 509 to 1       509/509
(100 %)
0 diff
(100 %id)
BG655808 Pancreas, Purified pancreatic islet .a 583 to 1120 572 to 35   AAA Submitted on the opposite strand 538/538
(100 %)
0 diff
(100 %id)
AA054780 uterus .a 591 to 804 1 to 214   fully sequenced,   214/214
(100 %)
0 diff
(100 %id)
AA152050 uterus .a 591 to 1121 1 to 529   fully sequenced,   529/529
(100 %)
3 diff
(99.5 %id)
AA838507 colon, colon tumor .a 596 to 1120 521 to 1       521/521
(100 %)
6 diff
(98.9 %id)
GD137292   .a 597 to 655 59 to 1     Submitted on the opposite strand 59/59
(100 %)
2 diff
(96.7 %id)
T40256 ovary .a 599 to 848 1 to 250   fully sequenced,   250/250
(100 %)
0 diff
(100 %id)
BE812346 amnion_normal .a 601 to 734 145 to 11       135/145
(93 %)
0 diff
(100 %id)
BE812397 amnion_normal .a 601 to 742 141 to 1       141/141
(100 %)
1 diff
(99.3 %id)
TI_57190218   .a 603 to 1120 52 to 569   AAA   518/518
(100 %)
0 diff
(100 %id)
TI_149270868   .a 603 to 1120 601 to 84   AAA   518/992
(52 %)
0 diff
(100 %id)
BE768935 prostate_tumor .a 604 to 755 9 to 153       145/153
(94 %)
6 diff
(96.1 %id)
BG655483 Pancreas, Purified pancreatic islet .a 604 to 1120 530 to 14   AAA Submitted on the opposite strand 517/517
(100 %)
0 diff
(100 %id)
CB043902 colon, juvenile granulosa tumor .a 609 to 1120 536 to 25   fully sequenced, AAA   512/512
(100 %)
0 diff
(100 %id)
TI_57150440   .a 612 to 1120 31 to 536   AAA   506/536
(94 %)
9 diff
(98.4 %id)
AA570580 invasive prostate tumor, Prostate .a 617 to 1033 418 to 1       418/418
(100 %)
2 diff
(99.6 %id)
EC572896 Prostate .a 626 to 716 1 to 90       90/90
(100 %)
1 diff
(98.9 %id)
TI_57191901   .a 629 to 1120 32 to 527   AAA   496/496
(100 %)
5 diff
(99.0 %id)
BE140142 head_neck .a 632 to 914 296 to 13     Submitted on the opposite strand 284/297
(95 %)
0 diff
(100 %id)
BE714618 head_neck .a 652 to 1058 406 to 2       405/406
(99 %)
1 diff
(99.8 %id)
GD155283   .a 652 to 978 1 to 326   AAA   326/326
(100 %)
3 diff
(99.1 %id)
AA115715 colon, tumor .a 654 to 1120 468 to 1       468/471
(99 %)
2 diff
(99.6 %id)
AA808865   .a 659 to 1121 467 to 5       463/467
(99 %)
2 diff
(99.6 %id)
DB549295 hippocampus .a 668 to 1120 1 to 453     Submitted on the opposite strand 453/453
(100 %)
0 diff
(100 %id)
AA601920   .a 669 to 1121 453 to 7       447/457
(97 %)
10 diff
(97.9 %id)
BQ477844 insulinoma, Pancreas .a 673 to 1091 426 to 8     Submitted on the opposite strand 419/426
(98 %)
0 diff
(100 %id)
N94545 senescent fibroblast .a 679 to 1120 454 to 12   AAA   442/443
(99 %)
5 diff
(98.9 %id)
AA160878 Pancreas .a 685 to 1120 436 to 1       436/436
(100 %)
0 diff
(100 %id)
BM673687 eye, eye anterior segment .a 688 to 1120 451 to 19   fully sequenced, AAA   433/433
(100 %)
0 diff
(100 %id)
BF083197 colon .a 692 to 931 248 to 11       238/256
(92 %)
0 diff
(100 %id)
BF086081 placenta_normal .a 692 to 898 212 to 6       207/220
(94 %)
0 diff
(100 %id)
BG977707 colon_ins .a 692 to 931 248 to 11       238/256
(92 %)
0 diff
(100 %id)
AA244212   .a 695 to 1121 427 to 1       427/427
(100 %)
7 diff
(98.4 %id)
BM818479 Ascites, stomach .a 699 to 830 1 to 132       132/132
(100 %)
3 diff
(97.8 %id)
W60171.
matches multiple genes
Pancreas, pancreatic islet .a 706 to 1120 415 to 1     also hits gene BTF3L3 415/415
(100 %)
0 diff
(100 %id)
AA665113 alveolar rhabdomyosarcoma .a 717 to 926 210 to 1       210/210
(100 %)
2 diff
(99.1 %id)
BX392226 Neuroblastoma Cot 25-normalized .a 730 to 1027 335 to 39   fully sequenced,   297/335
(88 %)
0 diff
(100 %id)
BU729782 eye, Retina Foveal and Macular .a 730 to 1120 409 to 19   fully sequenced, AAA   391/391
(100 %)
0 diff
(100 %id)
AA243129 brain, neuroepithelial cells .a 736 to 1121 386 to 2       385/386
(99 %)
1 diff
(99.8 %id)
EB361584 eye, lens .a 755 to 912 158 to 1       158/158
(100 %)
0 diff
(100 %id)
BF379049 uterus .a 758 to 1087 340 to 11       330/340
(97 %)
0 diff
(100 %id)
R91006 liver and spleen .a 761 to 1120 376 to 15   AAA Submitted on the opposite strand 362/443
(81 %)
2 diff
(99.6 %id)
CB147731 Liver .a 761 to 1120 400 to 41   AAA Submitted on the opposite strand 360/370
(97 %)
9 diff
(97.6 %id)
AA054592 uterus .a 774 to 1120 362 to 16   fully sequenced, AAA   347/347
(100 %)
0 diff
(100 %id)
AA149821 uterus .a 774 to 1120 361 to 16   fully sequenced, AAA   346/346
(100 %)
0 diff
(100 %id)
BX450573 neuroblastoma .a 781 to 1121 1 to 341   AAA   341/341
(100 %)
0 diff
(100 %id)
DB569556 hypothalamus .a 784 to 1249 1 to 466   tiling clone, Submitted on the opposite strand 466/466
(100 %)
0 diff
(100 %id)
T41118 ovary .a 787 to 1121 335 to 1   fully sequenced,   335/335
(100 %)
2 diff
(99.5 %id)
ES310220 scalp interfollicular dermis, skin .a 788 to 1120 351 to 19   AAA Submitted on the opposite strand 333/335
(99 %)
0 diff
(100 %id)
TI_149304312   .a 803 to 1120 400 to 83   AAA   318/936
(33 %)
2 diff
(99.8 %id)
BU679485 lung, Primary Lung Epithelial Cells .a 803 to 1120 336 to 19   AAA   318/622
(51 %)
2 diff
(99.7 %id)
BE937701 testis_normal .a 805 to 1001 194 to 1       194/196
(98 %)
3 diff
(98.5 %id)
BI495945.
matches multiple genes
cochlea, ear .a 808 to 1120 7 to 319   AAA Suspected internal deletion, this clone was ignored, also hits gene LOC652964 313/319
(98 %)
0 diff
(100 %id)
TI_149280942   .a 811 to 1121 469 to 160   AAA   310/875
(35 %)
0 diff
(100 %id)
AI370257 follicular lymphoma, lymph node .a 812 to 1106 290 to 1       290/306
(94 %)
12 diff
(96.1 %id)
AA114237 brain, neuroepithelial cells .a 825 to 1119 296 to 1       296/296
(100 %)
1 diff
(99.7 %id)
AI744971 ovary, tumor, 5 pooled (see description) .a 828 to 1120 293 to 1       293/294
(99 %)
20 diff
(93.2 %id)
AA659655 alveolar rhabdomyosarcoma .a 854 to 1002 149 to 1       149/156
(95 %)
0 diff
(100 %id)
BE927543 colon .a 859 to 1042 186 to 2       185/187
(98 %)
0 diff
(100 %id)
BF758676 colon .a 859 to 1043 185 to 1     Submitted on the opposite strand 185/186
(99 %)
0 diff
(100 %id)
G42974   .a 888 to 1091 1 to 204       204/204
(100 %)
0 diff
(100 %id)
BF170545 blood .a 890 to 1087 216 to 21     Submitted on the opposite strand 196/216
(90 %)
0 diff
(100 %id)
CU447466 epidermis .a 896 to 1121 233 to 8     Submitted on the opposite strand 226/243
(93 %)
0 diff
(100 %id)
CU449566 epidermis .a 896 to 1121 233 to 8     Submitted on the opposite strand 226/243
(93 %)
0 diff
(100 %id)
BX450365 brain, fetal brain .a 897 to 1121 1 to 226   AAA   226/226
(100 %)
1 diff
(99.6 %id)
AA886042 metastatic prostate bone lesion .a 942 to 1120 216 to 38   AAA   179/179
(100 %)
0 diff
(100 %id)
CB242457 Human Lung Epithelial cells, lung .a 944 to 1123 8 to 187   AAA Submitted on the opposite strand 180/198
(90 %)
2 diff
(99.0 %id)
CA449461 Chondrosarcoma, Left Pelvis .a 944 to 1116 8 to 181     Submitted on the opposite strand 174/188
(92 %)
3 diff
(98.5 %id)
BY999661   .a 972 to 1121 1 to 150     Submitted on the opposite strand 150/152
(98 %)
1 diff
(99.4 %id)
GD138306   .a 993 to 1120 1 to 128   AAA   128/128
(100 %)
8 diff
(93.8 %id)
EC500152 Prostate .a 1006 to 1114 108 to 1       108/108
(100 %)
1 diff
(99.1 %id)
EC528456 Prostate .a 1013 to 1114 110 to 10       101/110
(91 %)
0 diff
(100 %id)
EC581939 Prostate .a 1013 to 1118 121 to 12       110/121
(90 %)
0 diff
(100 %id)
EC575528 Prostate .a 1018 to 1114 108 to 10       99/108
(91 %)
0 diff
(100 %id)
EC527351 Prostate .a 1019 to 1112 107 to 14       94/107
(87 %)
0 diff
(100 %id)
GD138646   .a 1140 to 1197 58 to 1     Submitted on the opposite strand 58/69
(84 %)
1 diff
(98.6 %id)
BU661989 blood .b 1 to 606 1 to 606   tiling clone,   606/606
(100 %)
0 diff
(100 %id)
NM_001207.4   .b 18 to 1025 1 to 1008 exact RefSeq, AAA   1008/1008
(100 %)
0 diff
(100 %id)
BP225756   .b 21 to 607 1 to 587       587/587
(100 %)
0 diff
(100 %id)
TI_182940297   .b 23 to 896 948 to 85 I5X N7X G22X I59X AAA   864/1003
(86 %)
12 diff
(98.9 %id)
TI_45215909   .b 24 to 630 92 to 703       612/703
(87 %)
11 diff
(98.5 %id)
BQ778060 Pancreas, Purified pancreatic islet .b 29 to 567 3 to 541   fully sequenced,   539/541
(99 %)
5 diff
(99.1 %id)
CD698279 normal nasopharynx .b 30 to 565 13 to 547       535/547
(97 %)
8 diff
(98.6 %id)
BP225874   .b 33 to 613 1 to 581       581/581
(100 %)
0 diff
(100 %id)
AK225964 dermoid cancer .b 35 to 896 1 to 862 exact AAA   862/862
(100 %)
0 diff
(100 %id)
BP226978   .b 35 to 616 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP227152   .b 35 to 616 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP227628   .b 35 to 593 1 to 559       559/567
(98 %)
0 diff
(100 %id)
BJ996826 hepatoblastoma .b 35 to 531 1 to 497       497/497
(100 %)
1 diff
(99.8 %id)
BG493129 lung, mucoepidermoid carcinoma .b 35 to 666 1 to 644 M6D N7E Q8P E9G L11T ...     607/644
(94 %)
34 diff
(94.8 %id)
BU170933 eye, retinoblastoma .b 35 to 897 1 to 870 exact     870/871
(99 %)
14 diff
(98.4 %id)
BM760984 Ascites, stomach .b 35 to 691 1 to 657 N162X     657/657
(100 %)
0 diff
(100 %id)
BG613936 embryonal carcinoma, testis .b 36 to 875 1 to 860 K2N Q8H E9G L11T A12R ...     824/861
(95 %)
32 diff
(96.3 %id)
BM541785 leiomyosarcoma, uterus .b 36 to 896 1 to 861 exact AAA   861/861
(100 %)
7 diff
(99.2 %id)
BQ225901 melanotic melanoma, skin .b 36 to 892 1 to 866 exact     866/870
(99 %)
11 diff
(98.8 %id)
TI_57216481   .b 36 to 857 30 to 849 S114N     820/850
(96 %)
12 diff
(98.6 %id)
CB111045 Liver .b 36 to 614 1 to 579       579/579
(100 %)
0 diff
(100 %id)
CB111839 Liver .b 36 to 604 1 to 569       569/569
(100 %)
0 diff
(100 %id)
BM763698 Ascites, stomach .b 36 to 691 1 to 656 exact     656/656
(100 %)
0 diff
(100 %id)
BP376563 uterus .b 36 to 568 1 to 533   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 533/550
(96 %)
3 diff
(99.5 %id)
BP196197 adrenal gland .b 37 to 617 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA113637 cerebellum .b 37 to 595 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BP226249   .b 37 to 617 1 to 581       581/581
(100 %)
0 diff
(100 %id)
CB134733 Liver .b 37 to 714 1 to 678 exact     678/678
(100 %)
0 diff
(100 %id)
DA714544   .b 37 to 604 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
CV570923 cornea, eye .b 37 to 666 1 to 630 exact     630/630
(100 %)
0 diff
(100 %id)
BM788250 Ascites, stomach .b 37 to 661 1 to 625 exact     625/625
(100 %)
0 diff
(100 %id)
DA897910 skeletal muscle .b 37 to 599 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA899319 skeletal muscle .b 37 to 600 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB480538 hippocampus .b 38 to 540 1 to 502       502/502
(100 %)
1 diff
(99.9 %id)
TI_44348141   .b 38 to 730 130 to 832 K2*     704/969
(72 %)
31 diff
(96.9 %id)
DA934234 Spleen .b 38 to 616 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
AA243980   .b 39 to 495 1 to 453       453/453
(100 %)
16 diff
(96.5 %id)
BP196646 adrenal gland .b 41 to 628 1 to 588       588/588
(100 %)
0 diff
(100 %id)
AK291125   .b 41 to 657 1 to 617 exact     617/617
(100 %)
0 diff
(100 %id)
BP228409   .b 41 to 621 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP314981 mammary gland .b 41 to 624 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DA101007 cerebellum .b 42 to 630 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
BI195840 brain, neuroblastoma .b 42 to 717 719 to 47 K43N L44F Q45S F46S S47P ...   Submitted on the opposite strand 673/811
(82 %)
8 diff
(99.1 %id)
BQ269911 Pancreas, Purified pancreatic islet .b 42 to 567 4 to 529   fully sequenced,   526/529
(99 %)
6 diff
(98.9 %id)
DA734620   .b 42 to 580 2 to 539   fully sequenced, capped   538/538
(100 %)
1 diff
(99.9 %id)
DA734629   .b 42 to 580 2 to 540   fully sequenced, capped   539/539
(100 %)
0 diff
(100 %id)
DA932261 Spleen .b 42 to 599 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
TI_227714931   .b 42 to 896 932 to 88 I5X M6R N7X Q8R E9K ... AAA   845/979
(86 %)
15 diff
(98.5 %id)
AB062126   .b 45 to 896 1 to 852 exact AAA   852/852
(100 %)
0 diff
(100 %id)
BG488889 large cell carcinoma, lung .b 45 to 795 1 to 749 exact     749/867
(86 %)
9 diff
(99.0 %id)
TI_57228643   .b 45 to 897 63 to 914 exact     852/914
(93 %)
12 diff
(98.7 %id)
TI_149300019   .b 45 to 896 926 to 78 I5X N7T AAA   849/963
(88 %)
9 diff
(99.1 %id)
EL948840 eyeball .b 46 to 585 1 to 540       540/540
(100 %)
4 diff
(99.3 %id)
BI862510 breast, mammary adenocarcinoma, cell line .b 47 to 895 1 to 848 exact     848/864
(98 %)
7 diff
(99.2 %id)
BU181364 eye, retinoblastoma .b 47 to 897 1 to 854 exact     854/861
(99 %)
7 diff
(99.2 %id)
TI_57192689   .b 47 to 895 54 to 901 exact     848/931
(91 %)
7 diff
(99.3 %id)
TI_149287881   .b 47 to 896 938 to 93 I5X AAA   846/1012
(83 %)
14 diff
(98.7 %id)
TI_149299461   .b 47 to 896 936 to 94 I5S M6L N7X G22X AAA   843/949
(88 %)
14 diff
(98.6 %id)
TI_154061638   .b 47 to 896 935 to 92 K2X T4X I5X N7X G22X ... AAA   844/978
(86 %)
10 diff
(99.0 %id)
BX362918   .b 48 to 897 1 to 850 A137X fully sequenced,   850/850
(100 %)
0 diff
(100 %id)
EL953326 eyeball .b 48 to 608 1 to 561       561/561
(100 %)
2 diff
(99.7 %id)
BC021057 Colon, adenocarcinoma .b 48 to 896 1697 to 2545 exact tiling clone, AAA   849/2545
(33 %)
6 diff
(99.8 %id)
BG287588 bladder, transitional cell papilloma, cell line .b 48 to 853 1 to 792 exact     792/928
(85 %)
17 diff
(98.2 %id)
BM453372 melanotic melanoma, skin .b 48 to 896 1 to 857 exact     857/926
(92 %)
15 diff
(98.4 %id)
TI_57219522   .b 48 to 815 34 to 801 exact     768/801
(95 %)
10 diff
(98.8 %id)
TI_57149526   .b 48 to 896 59 to 904 exact AAA   846/904
(93 %)
13 diff
(98.6 %id)
TI_57152024   .b 48 to 877 39 to 879 R119T R120E L121T A122G E123R ...     841/883
(95 %)
24 diff
(97.3 %id)
TI_57179247   .b 48 to 877 30 to 859 exact     830/860
(96 %)
9 diff
(99.0 %id)
TI_57232780   .b 48 to 895 26 to 872 exact     847/879
(96 %)
29 diff
(96.8 %id)
TI_227715315   .b 48 to 896 938 to 95 I5S M6* AAA   841/976
(86 %)
16 diff
(98.4 %id)
BE618108 eye, retinoblastoma .b 49 to 593 606 to 65     Submitted on the opposite strand 542/687
(78 %)
4 diff
(99.5 %id)
BF970191 adrenal cortex carcinoma, cell line, adrenal gland .b 49 to 642 1 to 594 exact     594/594
(100 %)
0 diff
(100 %id)
BQ221992 large cell carcinoma, lung .b 49 to 895 1 to 850 exact AAA   850/853
(99 %)
10 diff
(98.9 %id)
TI_57232225   .b 49 to 776 35 to 762 exact     728/762
(95 %)
11 diff
(98.6 %id)
BC008062 Skin, melanotic melanoma. .b 50 to 896 1 to 847 exact available from MGC, AAA   847/847
(100 %)
0 diff
(100 %id)
F05946 brain, total brain .b 50 to 359 1 to 310       310/310
(100 %)
0 diff
(100 %id)
CN419740 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 50 to 722 1 to 673 exact     673/673
(100 %)
0 diff
(100 %id)
CN419757 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 50 to 737 1 to 688 exact     688/688
(100 %)
1 diff
(99.9 %id)
CN419768 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 50 to 707 1 to 659 exact     659/659
(100 %)
1 diff
(99.9 %id)
CN419775 embryonic stem cells, DMSO-treated H9 cellline .b 50 to 692 1 to 644 exact     644/644
(100 %)
1 diff
(99.9 %id)
BX456298 thymus .b 50 to 897 1 to 851 T100X L107X fully sequenced,   851/851
(100 %)
5 diff
(99.5 %id)
CA390834 eye, RPE/choroid .b 50 to 607 1 to 558       558/558
(100 %)
0 diff
(100 %id)
ES312252 frontal balding hair, skin .b 50 to 257 1 to 207       207/207
(100 %)
2 diff
(99.1 %id)
BI759520 pooled colon, kidney, stomach .b 50 to 896 1 to 844 exact AAA   844/844
(100 %)
7 diff
(99.2 %id)
BI906492 leukocyte .b 50 to 895 1 to 845 exact     845/852
(99 %)
23 diff
(97.4 %id)
BM474145 leiomyosarcoma, uterus .b 50 to 896 1 to 849 exact     849/1017
(83 %)
13 diff
(98.8 %id)
BM475675 embryonal carcinoma, cell line, testis .b 50 to 896 1 to 849 exact     849/1059
(80 %)
6 diff
(99.5 %id)
BM466065 embryonal carcinoma, cell line, testis .b 50 to 896 1 to 859 exact AAA   859/859
(100 %)
12 diff
(98.7 %id)
BM457531 embryonal carcinoma, cell line, testis .b 50 to 895 1 to 855 exact AAA   855/858
(99 %)
14 diff
(98.4 %id)
BU521249 leiomyosarcoma, uterus .b 50 to 895 1 to 851 exact AAA   851/854
(99 %)
10 diff
(98.9 %id)
CX870519 embryonic stem .b 50 to 848 1 to 799 exact     799/799
(100 %)
0 diff
(100 %id)
TI_57229776   .b 50 to 742 76 to 767 exact     692/692
(100 %)
1 diff
(99.9 %id)
TI_59393651   .b 50 to 773 86 to 806 exact     721/721
(100 %)
6 diff
(99.2 %id)
CV569975 cornea, eye .b 50 to 616 1 to 567       567/567
(100 %)
0 diff
(100 %id)
BM769007 stomach .b 50 to 615 1 to 566       566/566
(100 %)
0 diff
(100 %id)
X74070   .b 50 to 896 1 to 857 exact     857/857
(100 %)
6 diff
(99.3 %id)
AL560820 B cells from Burkitt lymphoma .b 51 to 860 809 to 1 K10T     809/809
(100 %)
4 diff
(99.6 %id)
AL560858 B cells from Burkitt lymphoma .b 51 to 897 1 to 847 exact     847/847
(100 %)
1 diff
(99.9 %id)
BX328902   .b 51 to 864 814 to 1 K10T K13T R35X S82F P135Q     814/814
(100 %)
11 diff
(98.7 %id)
BX328903   .b 51 to 897 1 to 848 exact     848/848
(100 %)
2 diff
(99.8 %id)
BM802074 eye, retinoblastoma .b 51 to 896 1 to 847 exact AAA   847/847
(100 %)
3 diff
(99.7 %id)
BQ219046 large cell carcinoma, lung .b 51 to 896 1 to 853 exact AAA   853/853
(100 %)
12 diff
(98.6 %id)
BQ441005 leiomyosarcoma, uterus .b 51 to 896 1 to 848 exact AAA   848/848
(100 %)
7 diff
(99.2 %id)
TI_57219542   .b 51 to 901 20 to 865 exact     846/908
(93 %)
17 diff
(98.2 %id)
BX380148 Placenta Cot 25-normalized .b 52 to 814 1 to 763 exact     763/763
(100 %)
0 diff
(100 %id)
BG036586 adenocarcinoma, cell line, Prostate .b 53 to 867 1 to 827 exact     827/857
(96 %)
22 diff
(97.5 %id)
TI_57219545   .b 54 to 777 24 to 745 F153L     723/745
(97 %)
11 diff
(98.6 %id)
TI_59392370   .b 54 to 857 70 to 868 I20M G21V G24E T25L A26L ...     796/868
(91 %)
17 diff
(98.1 %id)
BQ421918 embryonal carcinoma, cell line, testis .b 55 to 896 1 to 843 exact AAA   843/843
(100 %)
4 diff
(99.6 %id)
BY997165   .b 55 to 757 10 to 712 exact     703/712
(98 %)
6 diff
(99.2 %id)
BM912807 amelanotic melanoma, cell line, skin .b 56 to 794 1 to 741 exact     741/1080
(68 %)
16 diff
(98.6 %id)
BQ071970 brain, neuroblastoma, cell line .b 56 to 896 1 to 840 exact AAA   840/840
(100 %)
3 diff
(99.7 %id)
BQ956612 epidermoid carcinoma, cell line, lung .b 56 to 822 1 to 774 exact     774/974
(79 %)
8 diff
(99.2 %id)
N83321   .b 58 to 224 1 to 167       167/169
(98 %)
11 diff
(93.5 %id)
D78922 placenta .b 58 to 288 1 to 241       241/246
(97 %)
13 diff
(94.8 %id)
BQ051408 large cell carcinoma, lung .b 58 to 896 1 to 844 exact     844/1043
(80 %)
12 diff
(98.9 %id)
BX413820 brain, fetal brain .b 59 to 894 839 to 1 T4P K13E T25P     839/839
(100 %)
14 diff
(98.4 %id)
EC452097 Prostate .b 59 to 172 1 to 111       111/111
(100 %)
4 diff
(96.4 %id)
AW405717 lymph .b 59 to 480 1 to 422       422/422
(100 %)
5 diff
(98.9 %id)
BM461777 leiomyosarcoma, uterus .b 59 to 896 1 to 838 exact AAA   838/838
(100 %)
4 diff
(99.6 %id)
CB119324 Liver .b 59 to 614 1 to 556       556/556
(100 %)
0 diff
(100 %id)
TI_149278276   .b 59 to 896 926 to 97 T4X I5X N7X K10N L11S ... AAA   830/1084
(76 %)
19 diff
(98.3 %id)
BX407831 brain, fetal brain .b 60 to 866 809 to 1 E3D A16X R35X I56X N152B     809/809
(100 %)
6 diff
(99.3 %id)
BX407832 brain, fetal brain .b 60 to 897 1 to 838 exact     838/838
(100 %)
0 diff
(100 %id)
BX442791 brain, fetal brain .b 60 to 897 1 to 838 E3F I5X Q45*     838/838
(100 %)
4 diff
(99.6 %id)
AA082127   .b 60 to 459 1 to 401   fully sequenced,   401/401
(100 %)
2 diff
(99.6 %id)
BG288900 bladder, transitional cell papilloma, cell line .b 60 to 853 1 to 789 exact     789/903
(87 %)
19 diff
(97.9 %id)
BG697270 skin .b 60 to 896 1 to 844 exact     844/972
(86 %)
15 diff
(98.5 %id)
BM454524 embryonal carcinoma, cell line, testis .b 60 to 888 1 to 833 exact     833/1025
(81 %)
11 diff
(99.0 %id)
TI_59391634   .b 60 to 850 91 to 880 F153L D154M E155R A156L S157P ...     790/790
(100 %)
2 diff
(99.8 %id)
DN998699 bone marrow .b 60 to 852 1 to 792 exact     792/792
(100 %)
1 diff
(99.9 %id)
TI_149315457   .b 60 to 896 916 to 86 N7X I20X G22X AAA   831/971
(85 %)
12 diff
(98.8 %id)
BX401387   .b 61 to 897 1 to 837 T100X E101X     837/837
(100 %)
0 diff
(100 %id)
BM800753 melanotic melanoma, skin .b 61 to 841 1 to 787 exact     787/1084
(72 %)
7 diff
(99.4 %id)
BU177283 melanotic melanoma, skin .b 61 to 897 1 to 837 exact AAA   837/837
(100 %)
17 diff
(98.0 %id)
BU156522 eye, retinoblastoma .b 61 to 897 1 to 840 exact AAA   840/840
(100 %)
8 diff
(99.1 %id)
CD105375 brain, Pituitary .b 61 to 863 1 to 805 exact     805/816
(98 %)
4 diff
(99.6 %id)
TI_57230402   .b 61 to 897 86 to 924 exact     839/896
(93 %)
13 diff
(98.6 %id)
TI_149299624   .b 61 to 896 916 to 87 G22X V33F H34I R35E T36Q ... AAA   830/967
(85 %)
10 diff
(99.0 %id)
TI_227716959   .b 61 to 896 925 to 95 K10N L11F G22X AAA   831/984
(84 %)
9 diff
(99.1 %id)
ES308694 beard hair, skin .b 62 to 274 1 to 213       213/213
(100 %)
0 diff
(100 %id)
BI871186 adenocarcinoma, cell line, Liver .b 62 to 897 1 to 838 exact     838/855
(98 %)
13 diff
(98.5 %id)
BQ647850 hepatocellular carcinoma, cell line, Liver .b 62 to 883 1 to 838 exact     838/965
(86 %)
27 diff
(97.3 %id)
TI_227713866   .b 62 to 896 949 to 120 T4P I5X N7X AAA   830/947
(87 %)
14 diff
(98.6 %id)
BQ229278 embryonal carcinoma, cell line, testis .b 63 to 888 1 to 833 exact     833/845
(98 %)
11 diff
(98.7 %id)
BQ417345 Pancreas, Purified pancreatic islet .b 65 to 567 1 to 503   fully sequenced,   503/503
(100 %)
1 diff
(99.9 %id)
BU790317 Pancreas, Purified pancreatic islet .b 65 to 567 1 to 503   fully sequenced,   503/503
(100 %)
0 diff
(100 %id)
TI_154143134   .b 65 to 639 77 to 652       576/576
(100 %)
14 diff
(97.6 %id)
BQ073127 leukocyte .b 66 to 900 1 to 836 exact     836/1045
(80 %)
15 diff
(98.6 %id)
TI_227713002   .b 66 to 896 903 to 79 I5X N7X AAA   822/975
(84 %)
14 diff
(98.6 %id)
BE618879 eye, retinoblastoma .b 70 to 875 814 to 8 L11T A12R K13H L14T Q15A     804/814
(98 %)
13 diff
(98.5 %id)
BF792452 adrenal cortex carcinoma, cell line, adrenal gland .b 70 to 844 1 to 772 exact     772/961
(80 %)
12 diff
(98.8 %id)
BM789460 Ascites, stomach .b 70 to 670 1 to 601 exact     601/601
(100 %)
0 diff
(100 %id)
BU179546 large cell carcinoma, lung .b 71 to 896 1 to 831 exact AAA   831/831
(100 %)
11 diff
(98.7 %id)
TI_149291567   .b 71 to 896 899 to 77 I5F N7T G21V G24E T25L ... AAA   823/931
(88 %)
9 diff
(99.1 %id)
TI_154062238   .b 71 to 896 870 to 61 E3X I5S N7T K10N L11S ... AAA   810/930
(87 %)
37 diff
(96.1 %id)
TI_154126309   .b 71 to 896 899 to 87 T4Q I5S M6* AAA   810/925
(87 %)
14 diff
(98.5 %id)
TI_154143691   .b 71 to 615 79 to 623       545/546
(99 %)
2 diff
(99.7 %id)
BM807989 amelanotic melanoma, cell line, skin .b 72 to 896 1 to 831 exact AAA   831/831
(100 %)
8 diff
(99.1 %id)
CX783819 human embryonic stem cells .b 72 to 834 1 to 763 exact     763/763
(100 %)
0 diff
(100 %id)
BY995678   .b 73 to 756 29 to 711 exact     683/711
(96 %)
6 diff
(99.2 %id)
EC532151 Prostate .b 77 to 191 1 to 111       111/111
(100 %)
6 diff
(94.6 %id)
AW836255 leiomios .b 78 to 427 363 to 16       348/363
(95 %)
0 diff
(100 %id)
CN419744 embryonic stem cells, DMSO-treated H9 cellline .b 78 to 799 1 to 722 exact     722/722
(100 %)
2 diff
(99.8 %id)
EC478408 Prostate .b 78 to 191 1 to 112       112/112
(100 %)
2 diff
(98.3 %id)
CB162375 Liver .b 79 to 706 1 to 628 exact     628/628
(100 %)
0 diff
(100 %id)
CB164288 Liver .b 79 to 691 1 to 613 exact     613/613
(100 %)
0 diff
(100 %id)
EC574928 Prostate .b 80 to 193 1 to 112       112/114
(98 %)
3 diff
(97.4 %id)
BE907177 epithelioid carcinoma, Pancreas .b 80 to 850 1 to 770 exact     770/779
(98 %)
7 diff
(99.2 %id)
BM910786 astrocytoma grade IV, cell line, brain .b 80 to 895 1 to 819 exact     819/1100
(74 %)
14 diff
(98.8 %id)
TI_149287809   .b 81 to 896 895 to 84 N7X K10N L11S A12P K13N ... AAA   812/970
(83 %)
8 diff
(99.2 %id)
EC547093 Prostate .b 87 to 189 18 to 118       101/118
(85 %)
6 diff
(95.0 %id)
TI_57190283   .b 89 to 897 57 to 863 exact     807/876
(92 %)
10 diff
(98.9 %id)
TI_154141477   .b 89 to 575 82 to 568       487/487
(100 %)
13 diff
(97.4 %id)
AA092423   .b 91 to 226 1 to 130       130/139
(93 %)
13 diff
(90.7 %id)
AW405622 lymph .b 92 to 438 18 to 364       347/366
(94 %)
7 diff
(98.1 %id)
TI_154142931   .b 92 to 678 92 to 678 K97N L103R E145*     587/599
(97 %)
19 diff
(96.9 %id)
AA433866 ovarian tumor, ovary .b 93 to 580 1 to 489   fully sequenced,   489/489
(100 %)
1 diff
(99.8 %id)
TI_154143933   .b 94 to 825 84 to 813 L83P S117N D131G G132W A134S ...     730/731
(99 %)
60 diff
(91.8 %id)
TI_154148230   .b 94 to 676 107 to 690 S117*     584/665
(87 %)
25 diff
(96.3 %id)
N42592 melanocyte .b 98 to 331 1 to 234       234/234
(100 %)
0 diff
(100 %id)
BE766030 nervous_tumor .b 100 to 562 474 to 2       483/476
(101 %)
42 diff
(91.2 %id)
BQ433914 embryonal carcinoma, cell line, testis .b 102 to 896 1 to 795 exact AAA   795/795
(100 %)
6 diff
(99.3 %id)
TI_154144733   .b 104 to 638 78 to 610       533/537
(99 %)
4 diff
(99.3 %id)
BF094075 uterus_tumor .b 105 to 352 250 to 3       250/250
(100 %)
2 diff
(99.2 %id)
CA772090 Pancreas, Purified pancreatic islet .b 107 to 897 791 to 1 exact     791/791
(100 %)
0 diff
(100 %id)
TI_154100565   .b 107 to 896 887 to 109 T4P I5S M6* AAA   779/782
(99 %)
15 diff
(98.1 %id)
TI_154132812   .b 107 to 896 889 to 98 K2E E3R T4N I5H M6S ... AAA   789/797
(98 %)
19 diff
(97.7 %id)
BQ269310 Pancreas, Purified pancreatic islet .b 108 to 567 1 to 460   fully sequenced,   460/460
(100 %)
0 diff
(100 %id)
BQ631727 Pancreas, Purified pancreatic islet .b 108 to 567 1 to 460   fully sequenced,   460/460
(100 %)
0 diff
(100 %id)
BU785124 Pancreas, Purified pancreatic islet .b 108 to 567 1 to 460   fully sequenced,   460/460
(100 %)
0 diff
(100 %id)
CB177242 Pancreas, Purified pancreatic islet .b 108 to 580 1 to 473   fully sequenced,   473/473
(100 %)
0 diff
(100 %id)
CB069869 Pancreas, Purified pancreatic islet .b 108 to 567 1 to 460   fully sequenced,   460/460
(100 %)
0 diff
(100 %id)
TI_59387777   .b 112 to 580 1 to 478       478/505
(94 %)
19 diff
(96.3 %id)
CN419787 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 118 to 674 1 to 557 exact     557/557
(100 %)
0 diff
(100 %id)
BE831033 marrow .b 124 to 418 295 to 1       295/302
(97 %)
6 diff
(98.1 %id)
X53281   .b 124 to 851 212 to 939 exact     728/952
(76 %)
9 diff
(99.1 %id)
CN419761 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 125 to 744 1 to 620 exact     620/620
(100 %)
0 diff
(100 %id)
R88749 liver and spleen .b 128 to 539 10 to 432     Submitted on the opposite strand 423/472
(89 %)
25 diff
(94.8 %id)
BU629428 cell lines, Chondrosarcoma .b 138 to 896 777 to 19 N7X AAA   759/759
(100 %)
0 diff
(100 %id)
CD364318 Alveolar Macrophage, lung .b 138 to 896 777 to 19 K10N L11F G22X AAA   759/759
(100 %)
2 diff
(99.8 %id)
CA772108.
matches multiple genes
Pancreas, Purified pancreatic islet .b 140 to 897 760 to 3 exact   also hits gene BTF3P7 758/760
(99 %)
0 diff
(100 %id)
BF899226 marrow .b 141 to 548 412 to 5     Submitted on the opposite strand 408/412
(99 %)
0 diff
(100 %id)
BI093993 cervix .b 149 to 896 1 to 750 exact AAA   750/750
(100 %)
4 diff
(99.5 %id)
BX362917   .b 190 to 842 677 to 25   fully sequenced,   653/677
(96 %)
3 diff
(99.6 %id)
AA102560   .b 429 to 896 496 to 30   fully sequenced, AAA   467/467
(100 %)
0 diff
(100 %id)
TI_154132015   .b 441 to 1035 719 to 120   AAA   600/810
(74 %)
9 diff
(98.9 %id)
N31579 melanocyte .b 468 to 896 423 to 1       423/423
(100 %)
3 diff
(99.3 %id)
BX436307 thymus .b 506 to 896 407 to 17   fully sequenced, AAA   391/391
(100 %)
0 diff
(100 %id)
BQ285952 Pancreas, Purified pancreatic islet .b 506 to 896 402 to 12   fully sequenced, AAA   391/391
(100 %)
0 diff
(100 %id)
BQ286568 Pancreas, Purified pancreatic islet .b 506 to 895 390 to 1   fully sequenced,   390/390
(100 %)
0 diff
(100 %id)
BQ287887 Pancreas, Purified pancreatic islet .b 506 to 895 390 to 1   fully sequenced,   390/390
(100 %)
0 diff
(100 %id)
BQ632024 Pancreas, Purified pancreatic islet .b 506 to 896 391 to 1   fully sequenced,   391/391
(100 %)
0 diff
(100 %id)
BQ777754 Pancreas, Purified pancreatic islet .b 506 to 895 390 to 1   fully sequenced,   390/390
(100 %)
0 diff
(100 %id)
BU784870 Pancreas, Purified pancreatic islet .b 506 to 897 392 to 1   fully sequenced,   392/392
(100 %)
0 diff
(100 %id)
BU790018 Pancreas, Purified pancreatic islet .b 506 to 897 396 to 5   fully sequenced,   392/396
(98 %)
0 diff
(100 %id)
CB068599 Pancreas, Purified pancreatic islet .b 506 to 895 390 to 1   fully sequenced,   390/390
(100 %)
0 diff
(100 %id)
AW574645 lymph .b 520 to 1035 532 to 18   AAA   515/515
(100 %)
1 diff
(99.9 %id)
AA434379 ovarian tumor, ovary .b 550 to 896 347 to 1   fully sequenced,   347/347
(100 %)
0 diff
(100 %id)
CB068346 Pancreas, Purified pancreatic islet .b 550 to 895 346 to 1   fully sequenced,   346/346
(100 %)
0 diff
(100 %id)
DB366738   .b 550 to 896 347 to 1   fully sequenced,   347/347
(100 %)
0 diff
(100 %id)
DB366749   .b 550 to 896 347 to 1   fully sequenced,   347/347
(100 %)
0 diff
(100 %id)
F02194 brain, total brain .b 599 to 896 298 to 1       298/298
(100 %)
0 diff
(100 %id)
BM921301 pooled brain, lung, testis .c 1 to 874 11 to 888 exact tiling clone,   878/1039
(84 %)
23 diff
(97.8 %id)
CB104735 stomach .c 577 to 1053 1 to 477   tiling clone,   477/477
(100 %)
6 diff
(98.8 %id)
AK310919 trachea .d 1 to 886 2 to 887 exact tiling clone,   887/887
(100 %)
1 diff
(99.9 %id)
DB229884 trachea .d 1 to 594 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
AA356922   .d 630 to 786 1 to 157   tiling clone,   157/157
(100 %)
0 diff
(100 %id)
CV572767 cornea, eye .e 1 to 610 1 to 610 exact tiling clone,   610/610
(100 %)
0 diff
(100 %id)
CR619863 neuroblastoma .f 1 to 1094 1 to 1094 exact tiling clone,   1094/1094
(100 %)
0 diff
(100 %id)
CN419779 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f 6 to 536 1 to 531       531/531
(100 %)
9 diff
(98.4 %id)
CR601105 Neuroblastoma Cot 25-normalized .f 13 to 1045 1 to 1033 exact     1033/1033
(100 %)
0 diff
(100 %id)
CR612512 Placenta Cot 25-normalized .f 13 to 1084 1 to 1072 exact     1072/1072
(100 %)
0 diff
(100 %id)
AI291152 carcinoid, lung .f 18 to 536 1 to 518     Submitted on the opposite strand 518/519
(99 %)
25 diff
(95.2 %id)
CU443907 epidermis .g 1 to 303 1 to 303   tiling clone,   303/313
(96 %)
8 diff
(97.5 %id)
CU450432 epidermis .g 1 to 303 1 to 303       303/313
(96 %)
8 diff
(97.5 %id)
AA740559 2 pooled tumors (clear cell type), Kidney .g 23 to 410 388 to 1       388/388
(100 %)
2 diff
(99.5 %id)
BI766448 pooled lung and spleen .g 91 to 575 1 to 501   tiling clone,   501/782
(64 %)
33 diff
(95.8 %id)
BI711641 insulinoma, Pancreas .g 558 to 941 8 to 391       384/391
(98 %)
6 diff
(98.5 %id)
BQ581904 insulinoma, Pancreas .g 558 to 1110 8 to 558   tiling clone,   551/558
(98 %)
6 diff
(99.0 %id)
CN267704 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .g 648 to 1172 1 to 523       523/523
(100 %)
1 diff
(99.9 %id)
BI711239 insulinoma, Pancreas .g 1108 to 1721 629 to 16 exact tiling clone, AAA   614/614
(100 %)
2 diff
(99.7 %id)
BQ581578 insulinoma, Pancreas .g 1135 to 1721 602 to 16 exact tiling clone, AAA   587/587
(100 %)
0 diff
(100 %id)
BC061913 Brain, glioblastoma with EGFR amplification .h 1 to 1168 1 to 1167 exact tiling clone, available from MGC, AAA   1167/1167
(100 %)
1 diff
(100.0 %id)
BF338421 brain, glioblastoma with EGFR amplification .h 2 to 760 1 to 755   available from MGC,   755/869
(86 %)
23 diff
(97.4 %id)
DW418409 Liver .h 565 to 985 8 to 428 exact     421/428
(98 %)
7 diff
(98.4 %id)
DW462520 Liver .h 565 to 927 8 to 368 F90S K95R N96M E97R A98Q ...     361/368
(98 %)
12 diff
(96.8 %id)
CR621732 Placenta Cot 25-normalized .i 1 to 875 1 to 875 exact tiling clone,   875/875
(100 %)
0 diff
(100 %id)
CR612642 Placenta Cot 25-normalized .i 2 to 875 1 to 874 exact     874/874
(100 %)
0 diff
(100 %id)
CD708508 normal nasopharynx .i 9 to 315 17 to 324       308/324
(95 %)
12 diff
(96.3 %id)
CR590631 Neuroblastoma Cot 10-normalized .i 18 to 875 1 to 858 exact     858/858
(100 %)
0 diff
(100 %id)
CR602182 Placenta Cot 25-normalized .i 20 to 868 1 to 849 exact     849/849
(100 %)
0 diff
(100 %id)
CR604932 placenta .i 22 to 875 1 to 854 exact     854/854
(100 %)
0 diff
(100 %id)
CR605983 B cells (Ramos cell line) Cot 25-normalized .i 22 to 873 1 to 852 exact     852/852
(100 %)
0 diff
(100 %id)
CR607270 HeLa cells Cot 25-normalized .i 22 to 875 1 to 854 exact     854/854
(100 %)
0 diff
(100 %id)
CR609041 placenta .i 22 to 875 1 to 854 exact     854/854
(100 %)
0 diff
(100 %id)
CR620679 neuroblastoma .i 22 to 875 1 to 854 exact     854/854
(100 %)
0 diff
(100 %id)
CR622146 adult brain .i 22 to 875 1 to 854 exact     854/854
(100 %)
0 diff
(100 %id)
CR602819 fetal brain .i 23 to 875 1 to 853 exact     853/853
(100 %)
0 diff
(100 %id)
AA338133   .i 24 to 306 1 to 291       291/331
(87 %)
12 diff
(96.4 %id)
CR626478 thymus .i 24 to 875 1 to 852 exact     852/852
(100 %)
0 diff
(100 %id)
CR599581 B cells (Ramos cell line) Cot 25-normalized .i 25 to 875 1 to 851 exact     851/851
(100 %)
0 diff
(100 %id)
CR605220 T cells (Jurkat cell line) .i 25 to 866 1 to 842 exact     842/842
(100 %)
0 diff
(100 %id)
CR603059 Placenta Cot 25-normalized .i 26 to 860 1 to 835 exact     835/835
(100 %)
0 diff
(100 %id)
AA295313 Pancreas .i 33 to 309 1 to 279       279/284
(98 %)
5 diff
(98.3 %id)
CR596528 fetal brain .i 33 to 875 1 to 843 exact     843/843
(100 %)
0 diff
(100 %id)
BE746538 adenocarcinoma cell line, ovary .i 46 to 845 1 to 804 Q5A G6R T7N V8S I9*     803/814
(98 %)
32 diff
(96.1 %id)
BF174147 blood .i 48 to 316 1 to 270       270/312
(86 %)
14 diff
(95.6 %id)
AI460287 colon .i 144 to 875 732 to 6       532/737
(72 %)
30 diff
(96.0 %id)
BE965954 leiomyosarcoma, uterus .i 155 to 874 738 to 16 F2P T3S N4P Q5R G6T ... AAA   723/789
(91 %)
41 diff
(94.9 %id)
CR608812 neuroblastoma .i 195 to 879 1 to 685 exact tiling clone,   685/685
(100 %)
0 diff
(100 %id)
TI_57188885   .i 218 to 875 62 to 712 F90L D91M E92R A93L S94P ...     651/880
(73 %)
11 diff
(98.8 %id)
CD696386 normal nasopharynx .j 1 to 501 39 to 533 exact tiling clone,   496/533
(93 %)
12 diff
(97.8 %id)
FN172645 breast carcinoma .k-u 1 to 71 1 to 70   tiling clone,   70/70
(100 %)
4 diff
(94.3 %id)
BF744766 breast .k-u 15 to 167 16 to 167       152/167
(91 %)
6 diff
(96.5 %id)
BE081693 breast .k-u 18 to 176 165 to 7   tiling clone, Submitted on the opposite strand 159/165
(96 %)
0 diff
(100 %id)
BF744750 breast .k-u 18 to 176 16 to 173       158/179
(88 %)
5 diff
(97.3 %id)
W52039.
matches multiple genes
Pancreas, pancreatic islet L3.a-u 1 to 464 1 to 467 F9V V15A A26T V29L V36I ... tiling clone, also hits gene BTF3L3 467/467
(100 %)
44 diff
(90.6 %id)
BX359147.
matches multiple genes
Placenta Cot 25-normalized P4.a-u 60 to 770 332 to 1036 L2A A3T S4Q V5H N7K ... tiling clone, also hits gene BTF3P4 705/1036
(68 %)
6 diff
(99.5 %id)
CA772403.
matches multiple genes
Pancreas, Purified pancreatic islet P7.a-u 1 to 762 1 to 759 E6G H12N L14P T31A A33T ... tiling clone, also hits gene BTF3P7 759/759
(100 %)
69 diff
(91.0 %id)
AV684476 hepatocellular carcinoma Gene BTF3, variant not shown         Submitted on the opposite strand    
AV697022 hepatocellular carcinoma Gene BTF3, variant not shown       AAA Submitted on the opposite strand    
AV697024 hepatocellular carcinoma Gene BTF3, variant not shown       AAA Submitted on the opposite strand    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI