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Gene BRMS1LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
133 supporting clones for gene BRMS1L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB176549 kidney, tumor tissue BRMS1L.a 1 to 541 2 to 542   tiling clone, capped   541/541
(100 %)
0 diff
(100 %id)
DB470202 hippocampus BRMS1L.a 20 to 475 1 to 455       455/455
(100 %)
2 diff
(99.6 %id)
BU507838 leiomyosarcoma, uterus BRMS1L.a 29 to 917 1 to 890       890/890
(100 %)
7 diff
(99.3 %id)
BX482648   BRMS1L.a 72 to 761 1 to 690       690/690
(100 %)
3 diff
(99.6 %id)
CD109506 Human Placenta, placenta BRMS1L.a 73 to 732 29 to 691       661/778
(84 %)
10 diff
(98.8 %id)
CD109495 Human Placenta, placenta BRMS1L.a 73 to 643 29 to 608       580/785
(73 %)
19 diff
(97.6 %id)
NM_032352.3   BRMS1L.a 73 to 2655 1 to 2583 exact RefSeq, AAA   2583/2583
(100 %)
0 diff
(100 %id)
DB263081 uterus BRMS1L.a 77 to 666 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA167168 amygdala BRMS1L.a 82 to 655 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
AY827074   BRMS1L.a 87 to 1361 1 to 1275 V206G     1275/1283
(99 %)
4 diff
(99.7 %id)
BE741838 adenocarcinoma cell line, ovary BRMS1L.a 89 to 812 1 to 727       727/728
(99 %)
18 diff
(97.6 %id)
TI_57242859   BRMS1L.a 89 to 890 28 to 830       803/831
(96 %)
15 diff
(98.2 %id)
DN994371 brain, whole brain BRMS1L.a 90 to 639 1 to 550       550/561
(98 %)
11 diff
(98.1 %id)
BC006250 Ovary, adenocarcinoma BRMS1L.a 93 to 1360 1 to 1268 exact available from MGC, AAA   1268/1268
(100 %)
0 diff
(100 %id)
BX280658 brain BRMS1L.a 94 to 587 1 to 494       494/494
(100 %)
1 diff
(99.8 %id)
BI914436 brain BRMS1L.a 94 to 890 1 to 798       798/799
(99 %)
4 diff
(99.5 %id)
DA146105 amygdala BRMS1L.a 103 to 651 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
CR595618 fetal brain BRMS1L.a 113 to 2627 1 to 2515 exact tiling clone,   2515/2515
(100 %)
0 diff
(100 %id)
CR612796 fetal brain BRMS1L.a 113 to 2592 1 to 2480 exact     2480/2480
(100 %)
0 diff
(100 %id)
BX419113 brain, fetal brain BRMS1L.a 113 to 1164 1 to 1033       1033/1051
(98 %)
22 diff
(98.0 %id)
BX407751 brain, fetal brain BRMS1L.a 113 to 1050 1 to 941       939/941
(99 %)
5 diff
(99.5 %id)
BX440994 brain, fetal brain BRMS1L.a 113 to 1118 1 to 994       996/999
(99 %)
21 diff
(97.9 %id)
BG912369 anaplastic oligodendroglioma with 1p/19qloss, brain BRMS1L.a 116 to 632 1 to 530       528/594
(88 %)
17 diff
(97.2 %id)
CN273197 embryonic stem cells, DMSO-treated H9 cellline BRMS1L.a 126 to 261 1 to 136       136/136
(100 %)
0 diff
(100 %id)
DA475188   BRMS1L.a 139 to 711 2 to 574   capped   573/573
(100 %)
3 diff
(99.5 %id)
BF026108 melanotic melanoma, skin BRMS1L.a 140 to 923 1 to 780       780/933
(83 %)
23 diff
(97.6 %id)
DA666155   BRMS1L.a 140 to 682 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA753547   BRMS1L.a 140 to 694 2 to 556   capped   555/556
(99 %)
3 diff
(99.5 %id)
DB063446 testis BRMS1L.a 140 to 688 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
AK315424   BRMS1L.a 142 to 1170 1 to 1029 exact     1029/1029
(100 %)
0 diff
(100 %id)
DA477024   BRMS1L.a 143 to 706 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA745534   BRMS1L.a 143 to 709 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
Z99356 amygdala, ovary BRMS1L.a 145 to 766 1 to 621       621/621
(100 %)
1 diff
(99.9 %id)
TI_1948121343   BRMS1L.a 193 to 1178 1116 to 119 S5F R6P G7K D8G K9D ...     998/1262
(79 %)
35 diff
(97.3 %id)
CV026808 mixed BRMS1L.a 199 to 831 1 to 632       632/632
(100 %)
1 diff
(99.9 %id)
TI_1948105334   BRMS1L.a 199 to 1118 132 to 1057       926/1107
(83 %)
24 diff
(97.9 %id)
TI_1948105516   BRMS1L.a 199 to 670 135 to 606   fully sequenced,   472/606
(77 %)
6 diff
(99.1 %id)
TI_1948105693   BRMS1L.a 199 to 670 125 to 596   fully sequenced,   472/596
(79 %)
6 diff
(99.0 %id)
AK096496 brain BRMS1L.a 350 to 2655 1 to 2306   available from FLJ,   2306/2306
(100 %)
1 diff
(100.0 %id)
DA771024 brain BRMS1L.a 351 to 925 2 to 577   capped   576/585
(98 %)
1 diff
(99.9 %id)
BE538919 cervix BRMS1L.a 375 to 925 1 to 572       572/821
(69 %)
34 diff
(95.9 %id)
DA369624 subthalamic nucleus BRMS1L.a 422 to 1007 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
TI_1948105517   BRMS1L.a 609 to 1178 690 to 121   fully sequenced,   570/690
(82 %)
5 diff
(99.3 %id)
TI_1948105694   BRMS1L.a 609 to 1178 689 to 120   fully sequenced,   570/689
(82 %)
5 diff
(99.3 %id)
DA129663 alzheimer cortex BRMS1L.a 662 to 1195 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
BI764978 pooled colon, kidney, stomach BRMS1L.a 704 to 1417 1 to 713       713/713
(100 %)
2 diff
(99.8 %id)
TI_57152880   BRMS1L.a 704 to 1417 63 to 775       713/775
(92 %)
8 diff
(99.0 %id)
BM714148 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid BRMS1L.a 767 to 1362 1 to 596   fully sequenced, AAA   596/596
(100 %)
1 diff
(99.9 %id)
CD671232 eye, Iris BRMS1L.a 771 to 1363 610 to 18   AAA   593/593
(100 %)
3 diff
(99.5 %id)
BX408231 brain, fetal brain BRMS1L.a 815 to 1386 33 to 607       575/871
(66 %)
22 diff
(97.5 %id)
BX450685 brain, fetal brain BRMS1L.a 815 to 1596 1 to 791       791/897
(88 %)
19 diff
(97.9 %id)
BX452070 brain, fetal brain BRMS1L.a 826 to 1803 1 to 974       974/976
(99 %)
44 diff
(95.5 %id)
AA906427 pooled BRMS1L.a 854 to 1361 508 to 1       508/508
(100 %)
2 diff
(99.7 %id)
AL693862   BRMS1L.a 870 to 1449 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
BU738855 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid BRMS1L.a 895 to 1360 484 to 19   fully sequenced, AAA   466/466
(100 %)
1 diff
(99.8 %id)
CN261669 embryonic stem cells, DMSO-treated H9 cellline BRMS1L.a 1080 to 1786 9 to 715       707/715
(98 %)
6 diff
(99.2 %id)
BQ723517 sympathetic trunk BRMS1L.a 1109 to 1808 1 to 700       700/984
(71 %)
17 diff
(98.3 %id)
BX433094 brain, fetal brain BRMS1L.a 1116 to 1943 837 to 16       822/837
(98 %)
0 diff
(100 %id)
BX433095 brain, fetal brain BRMS1L.a 1132 to 2027 898 to 1       898/898
(100 %)
17 diff
(98.2 %id)
AA649779 alveolar rhabdomyosarcoma BRMS1L.a 1145 to 1360 1 to 216   AAA   216/216
(100 %)
1 diff
(99.6 %id)
AA652143 alveolar rhabdomyosarcoma BRMS1L.a 1145 to 1360 1 to 216   AAA   216/216
(100 %)
1 diff
(99.6 %id)
AA662061 alveolar rhabdomyosarcoma BRMS1L.a 1146 to 1361 8 to 223       216/227
(95 %)
2 diff
(99.2 %id)
BX408452 brain, fetal brain BRMS1L.a 1207 to 2102 899 to 5       895/900
(99 %)
0 diff
(100 %id)
BE073130 breast BRMS1L.a 1218 to 1662 21 to 464       444/476
(93 %)
6 diff
(98.8 %id)
T31793 colon, embryo BRMS1L.a 1241 to 1577 1 to 341       341/341
(100 %)
4 diff
(98.9 %id)
AW965487   BRMS1L.a 1242 to 1787 1 to 549       549/556
(98 %)
14 diff
(97.5 %id)
Z44923 brain, total brain BRMS1L.a 1301 to 1554 1 to 254       254/254
(100 %)
0 diff
(100 %id)
BX090529   BRMS1L.a 1363 to 1662 1 to 299       299/299
(100 %)
5 diff
(98.4 %id)
AA461126   BRMS1L.a 1368 to 1826 1 to 459       459/459
(100 %)
0 diff
(100 %id)
BU958740 mixed (pool of 40 RNAs) BRMS1L.a 1474 to 2224 1 to 765       765/765
(100 %)
25 diff
(96.8 %id)
Z45595 brain, total brain BRMS1L.a 1479 to 1745 1 to 267       267/267
(100 %)
0 diff
(100 %id)
BE865983 bladder, carcinoma, cell line BRMS1L.a 1481 to 2164 1 to 667       667/852
(78 %)
32 diff
(96.3 %id)
BM712928 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid BRMS1L.a 1570 to 2063 1 to 494   fully sequenced,   494/494
(100 %)
0 diff
(100 %id)
FN165848 breast carcinoma BRMS1L.a 1576 to 1678 107 to 1     Submitted on the opposite strand 107/107
(100 %)
4 diff
(96.3 %id)
CN261670 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells BRMS1L.a 1607 to 1794 1 to 188       188/188
(100 %)
3 diff
(98.5 %id)
W05402 lung BRMS1L.a 1612 to 2101 1 to 483       483/508
(95 %)
8 diff
(98.5 %id)
CF144603 CNCAP(3)T-225 cell line, Prostate BRMS1L.a 1640 to 2080 1 to 440       440/440
(100 %)
3 diff
(99.4 %id)
TI_154176686   BRMS1L.a 1648 to 2197 97 to 651       555/1227
(45 %)
11 diff
(99.2 %id)
AW803834 uterus BRMS1L.a 1736 to 2164 430 to 1       430/430
(100 %)
4 diff
(99.1 %id)
CB151697 cervix, Uterine BRMS1L.a 1760 to 2323 1 to 564       564/564
(100 %)
0 diff
(100 %id)
TI_159714394   BRMS1L.a 1781 to 2655 957 to 86   AAA   872/1023
(85 %)
6 diff
(99.5 %id)
FN093000 breast carcinoma BRMS1L.a 1784 to 1899 1 to 116       116/116
(100 %)
0 diff
(100 %id)
AA448775   BRMS1L.a 1785 to 2168 1 to 384       384/384
(100 %)
1 diff
(99.8 %id)
AI680807 carcinoid, lung BRMS1L.a 1786 to 2242 1 to 457     Submitted on the opposite strand 457/457
(100 %)
0 diff
(100 %id)
M78897   BRMS1L.a 1808 to 2218 1 to 411       411/415
(99 %)
2 diff
(99.6 %id)
W21100 lung BRMS1L.a 1838 to 2007 1 to 170       170/170
(100 %)
1 diff
(99.5 %id)
BX434941 brain, fetal brain BRMS1L.a 1873 to 2630 758 to 2       757/844
(89 %)
0 diff
(100 %id)
CB306908 Human Lung Epithelial cells, lung BRMS1L.a 1885 to 2655 789 to 19   AAA   771/771
(100 %)
3 diff
(99.7 %id)
TI_57215356   BRMS1L.a 1947 to 2656 32 to 741       710/826
(85 %)
7 diff
(99.2 %id)
BI754452 brain BRMS1L.a 1948 to 2656 1 to 709       709/794
(89 %)
7 diff
(99.2 %id)
BX407750 brain, fetal brain BRMS1L.a 1968 to 2627 660 to 1       660/664
(99 %)
8 diff
(98.8 %id)
BM673774 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid BRMS1L.a 2033 to 2655 641 to 19   fully sequenced, AAA   623/623
(100 %)
0 diff
(100 %id)
CD677611 eye, Trabecular meshwork BRMS1L.a 2049 to 2650 1 to 602       602/602
(100 %)
0 diff
(100 %id)
AA779684   BRMS1L.a 2062 to 2656 598 to 3       596/598
(99 %)
0 diff
(100 %id)
DB325733 brain BRMS1L.a 2082 to 2655 575 to 1       575/575
(100 %)
1 diff
(99.9 %id)
CN283069 embryonic stem cells, cell lines H1, H7, andH9 BRMS1L.a 2092 to 2656 38 to 602   tiling clone,   565/606
(93 %)
1 diff
(99.9 %id)
AI990126 pooled germ cell tumors BRMS1L.a 2104 to 2596 1 to 493     Submitted on the opposite strand 493/493
(100 %)
0 diff
(100 %id)
AI393307 B-cell, chronic lymphotic leukemia BRMS1L.a 2116 to 2655 552 to 13   AAA   540/540
(100 %)
1 diff
(99.9 %id)
Z99357 amygdala, ovary BRMS1L.a 2122 to 2656 540 to 6       535/540
(99 %)
0 diff
(100 %id)
AI375921 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BRMS1L.a 2148 to 2655 508 to 1       508/508
(100 %)
0 diff
(100 %id)
AI972840 Prostate BRMS1L.a 2149 to 2655 507 to 1       507/507
(100 %)
2 diff
(99.7 %id)
AA663405   BRMS1L.a 2173 to 2653 491 to 10       482/491
(98 %)
0 diff
(100 %id)
AA308885 brain, cerebellum BRMS1L.a 2190 to 2504 1 to 315       315/315
(100 %)
0 diff
(100 %id)
BF941357 dorsal root ganglia BRMS1L.a 2190 to 2656 468 to 1       468/468
(100 %)
2 diff
(99.6 %id)
AW952286   BRMS1L.a 2191 to 2569 1 to 380       380/380
(100 %)
7 diff
(98.2 %id)
AW304325 lung, two pooled squamous cell carcinomas BRMS1L.a 2199 to 2655 457 to 1       457/457
(100 %)
0 diff
(100 %id)
AA974270 pooled germ cell tumors BRMS1L.a 2220 to 2655 436 to 1       436/436
(100 %)
0 diff
(100 %id)
AW136476   BRMS1L.a 2225 to 2655 448 to 18   AAA   431/431
(100 %)
1 diff
(99.8 %id)
DB538240 hippocampus BRMS1L.a 2227 to 2655 1 to 431     Submitted on the opposite strand 431/431
(100 %)
4 diff
(99.1 %id)
N70540 lung BRMS1L.a 2227 to 2655 443 to 1       443/444
(99 %)
21 diff
(95.3 %id)
H40712 brain BRMS1L.a 2233 to 2622 1 to 392       392/393
(99 %)
5 diff
(98.8 %id)
AA460824   BRMS1L.a 2234 to 2656 429 to 7       423/429
(98 %)
0 diff
(100 %id)
AI126358 uterus BRMS1L.a 2234 to 2656 431 to 9       423/431
(98 %)
0 diff
(100 %id)
DB510121 testis BRMS1L.a 2241 to 2655 1 to 414     Submitted on the opposite strand 414/414
(100 %)
5 diff
(98.8 %id)
BM986833 mixed BRMS1L.a 2251 to 2655 423 to 19   AAA   405/405
(100 %)
0 diff
(100 %id)
AA745745 germinal center B cell BRMS1L.a 2253 to 2405 153 to 1       153/153
(100 %)
0 diff
(100 %id)
AA448679   BRMS1L.a 2265 to 2655 391 to 1       391/391
(100 %)
0 diff
(100 %id)
TI_153987644   BRMS1L.a 2266 to 2317 477 to 426       52/52
(100 %)
0 diff
(100 %id)
AI141365 parathyroid gland, parathyroid tumor BRMS1L.a 2268 to 2655 403 to 16   AAA   388/389
(99 %)
0 diff
(100 %id)
BX419112 brain, fetal brain BRMS1L.a 2276 to 2592 317 to 1       846/923
(91 %)
85 diff
(90.8 %id)
DB529490 hippocampus BRMS1L.a 2286 to 2656 1 to 386     Submitted on the opposite strand 386/391
(98 %)
9 diff
(97.7 %id)
AW203996   BRMS1L.a 2286 to 2655 387 to 18   AAA   370/370
(100 %)
0 diff
(100 %id)
AI140937 heart BRMS1L.a 2299 to 2656 363 to 6       358/363
(98 %)
0 diff
(100 %id)
AA836514 germinal center B cell BRMS1L.a 2315 to 2655 362 to 22   AAA   341/341
(100 %)
0 diff
(100 %id)
AA909052 pooled BRMS1L.a 2335 to 2656 326 to 5       322/326
(98 %)
0 diff
(100 %id)
N93713 lung BRMS1L.a 2406 to 2655 251 to 1       251/251
(100 %)
1 diff
(99.7 %id)
Z41283 brain, total brain BRMS1L.a 2423 to 2655 233 to 1       233/233
(100 %)
0 diff
(100 %id)
F03886 brain, total brain BRMS1L.a 2443 to 2655 213 to 1       213/213
(100 %)
1 diff
(99.6 %id)
AI889479 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors BRMS1L.a 2481 to 2656 176 to 1       176/176
(100 %)
0 diff
(100 %id)
AK297106   BRMS1L.b 1 to 1543 2 to 1544 R252G tiling clone,   1544/1544
(100 %)
1 diff
(100.0 %id)
DA474769   BRMS1L.b 1 to 567 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
BQ071431 brain, neuroblastoma, cell line BRMS1L.b 18 to 829 1 to 817       817/1104
(74 %)
24 diff
(97.9 %id)
AK310359 testis BRMS1L.c 1 to 1077 1 to 1077 exact tiling clone,   1077/1077
(100 %)
0 diff
(100 %id)
AK309431 brain BRMS1L.d 1 to 1201 1 to 1201 exact tiling clone,   1201/1201
(100 %)
2 diff
(99.9 %id)
DA527945 brain BRMS1L.d 2 to 575 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
BX495277 Liver BRMS1L.e 1 to 610 1 to 612   tiling clone,   612/612
(100 %)
10 diff
(98.4 %id)
AA773226 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BRMS1L.e 523 to 812 1 to 290   tiling clone,   290/290
(100 %)
1 diff
(99.7 %id)
AI371066 lung BRMS1L.e 654 to 1087 442 to 9 exact tiling clone,   434/442
(98 %)
0 diff
(100 %id)
AI332867 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BRMS1L.e 744 to 1089 346 to 1 exact tiling clone,   346/346
(100 %)
2 diff
(99.5 %id)
DB463573 hippocampus BRMS1L.f-u 1 to 427 1 to 428 G53W S54K L55S S57I L58T ... tiling clone,   428/428
(100 %)
1 diff
(99.8 %id)
DB476754 hippocampus BRMS1L.f-u 1 to 496 1 to 497 G53W S54K L55S S57I L58T ...     497/497
(100 %)
2 diff
(99.6 %id)
AI086392 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BRMS1L.f-u 220 to 648 440 to 12   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 429/429
(100 %)
0 diff
(100 %id)
AI093014 heart BRMS1L.f-u 323 to 653 331 to 1   tiling clone,   331/331
(100 %)
2 diff
(99.4 %id)
CN261671 embryonic stem cells, cell lines H1, H7, andH9 BRMS1L.g 1 to 650 1 to 650 exact tiling clone,   650/650
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI