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Gene BRD9TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
425 supporting clones for gene BRD9 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AL536596 brain, fetal brain BRD9.a 1 to 973 3 to 965   tiling clone,   965/965
(100 %)
12 diff
(98.8 %id)
DA908236   BRD9.a 335 to 882 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
BP383415 ilea mucosa BRD9.a 395 to 963 1 to 572   tiling clone,   572/580
(98 %)
8 diff
(98.7 %id)
BG829569 epithelioid carcinoma cell line, Pancreas BRD9.a 925 to 1791 1 to 866   tiling clone,   868/866
(100 %)
22 diff
(97.5 %id)
AL566401 brain, fetal brain BRD9.a 1761 to 2686 935 to 9   tiling clone,   927/935
(99 %)
5 diff
(99.5 %id)
AK299157   BRD9.b 1 to 2156 1 to 2156 exact tiling clone,   2156/2156
(100 %)
1 diff
(100.0 %id)
NM_023924.4   BRD9.b 1 to 2699 1 to 2699 exact RefSeq,   2699/2699
(100 %)
4 diff
(99.9 %id)
DC424360   BRD9.b 1 to 694 1 to 692       692/692
(100 %)
5 diff
(99.3 %id)
BF967385 brain, hypothalamus BRD9.b 19 to 774 1 to 753       753/769
(97 %)
27 diff
(96.5 %id)
AL520354 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized BRD9.b 32 to 1108 1 to 1073       1031/1080
(95 %)
75 diff
(93.1 %id)
TI_57234706   BRD9.b 32 to 680 28 to 680       651/680
(95 %)
15 diff
(97.8 %id)
BI908860 leukocyte BRD9.b 38 to 680 1 to 647       645/647
(99 %)
14 diff
(97.9 %id)
TI_57187597   BRD9.b 39 to 894 104 to 982       877/893
(98 %)
49 diff
(94.6 %id)
AY211916   BRD9.b 41 to 881 8 to 843       836/855
(97 %)
26 diff
(97.0 %id)
DB117150 thymus BRD9.b 44 to 587 2 to 545   capped   544/545
(99 %)
2 diff
(99.7 %id)
BQ948088 eye, normal pigmented retinal epithelium BRD9.b 55 to 885 23 to 856       832/986
(84 %)
20 diff
(98.0 %id)
BX333142 Neuroblastoma Cot 25-normalized BRD9.b 57 to 998 1 to 934       934/934
(100 %)
12 diff
(98.8 %id)
BQ884055 Spleen BRD9.b 81 to 989 1 to 913       913/915
(99 %)
9 diff
(99.1 %id)
CN311109 embryonic stem cells, cell lines H1, H7, andH9 BRD9.b 99 to 791 1 to 693       693/693
(100 %)
3 diff
(99.6 %id)
BP330290 rectum BRD9.b 181 to 762 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA383283 thalamus BRD9.b 221 to 770 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA572152 whole embryo, mainly body BRD9.b 354 to 716 421 to 786   capped   366/809
(45 %)
12 diff
(98.6 %id)
DA732599   BRD9.b 372 to 831 2 to 460   capped   459/459
(100 %)
1 diff
(99.8 %id)
BQ070826 brain, neuroblastoma, cell line BRD9.b 397 to 1132 1 to 740       740/1066
(69 %)
11 diff
(99.0 %id)
TI_57187916   BRD9.b 518 to 1209 50 to 741       692/701
(98 %)
3 diff
(99.6 %id)
BI857669 breast, mammary adenocarcinoma, cell line BRD9.b 519 to 1209 1 to 691       691/700
(98 %)
3 diff
(99.6 %id)
BF333145 breast BRD9.b 586 to 931 348 to 1       348/353
(98 %)
12 diff
(96.7 %id)
BF333174 breast BRD9.b 586 to 921 345 to 5       341/350
(97 %)
17 diff
(95.2 %id)
DQ248311 embryonal rhabdomyosarcoma BRD9.b 676 to 2688 1 to 2013   tiling clone,   2013/2013
(100 %)
0 diff
(100 %id)
BF333138 breast BRD9.b 701 to 1146 457 to 14       444/459
(96 %)
0 diff
(100 %id)
BF333136 breast BRD9.b 706 to 1131 425 to 1       425/425
(100 %)
5 diff
(98.9 %id)
BF333119 breast BRD9.b 712 to 1130 426 to 4       423/426
(99 %)
17 diff
(96.1 %id)
BF155001 breast BRD9.b 719 to 1229 516 to 6       511/516
(99 %)
0 diff
(100 %id)
DA477992   BRD9.b 736 to 1317 2 to 583   capped   582/584
(99 %)
1 diff
(99.9 %id)
BF333168 breast BRD9.b 763 to 1193 455 to 27       429/455
(94 %)
3 diff
(99.4 %id)
BF333160 breast BRD9.b 779 to 1209 430 to 3       428/430
(99 %)
2 diff
(99.6 %id)
BF947143 nervous_normal BRD9.b 812 to 1130 324 to 8       317/635
(49 %)
8 diff
(98.8 %id)
BF082823 breast BRD9.b 814 to 1209 421 to 28       394/421
(93 %)
10 diff
(97.7 %id)
AK026830 Human lung BRD9.b 870 to 2688 1 to 1820   available from FLJ, AAA   1820/1820
(100 %)
2 diff
(99.9 %id)
BP293112 lung BRD9.b 870 to 1438 1 to 571       571/583
(97 %)
14 diff
(97.6 %id)
DA836682 placenta BRD9.b 872 to 1437 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BX333141 Neuroblastoma Cot 25-normalized BRD9.b 1594 to 2637 1040 to 1       1040/1040
(100 %)
19 diff
(98.2 %id)
AL520353 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized BRD9.b 1786 to 2655 877 to 1       877/877
(100 %)
22 diff
(97.5 %id)
BF967815 brain, hypothalamus BRD9.b 1860 to 2638 789 to 1       789/791
(99 %)
43 diff
(94.6 %id)
DC427194   BRD9.b 2138 to 2688 546 to 1       546/551
(99 %)
25 diff
(95.5 %id)
AU146480 whole embryo, mainly body BRD9.b 2145 to 2688 545 to 1       545/549
(99 %)
8 diff
(98.6 %id)
DB364160   BRD9.b 2429 to 2688 262 to 2       261/262
(99 %)
0 diff
(100 %id)
NM_001009877.2   BRD9.c 1 to 2525 2 to 2526 exact RefSeq,   2526/2526
(100 %)
4 diff
(99.9 %id)
AK297573 brain BRD9.c 13 to 2132 1 to 2120 exact tiling clone,   2120/2120
(100 %)
1 diff
(100.0 %id)
DC353248 brain BRD9.c 13 to 587 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DW448366 Liver BRD9.c 16 to 207 16 to 207       192/208
(92 %)
11 diff
(94.8 %id)
NR_027633.1   BRD9.d 1 to 2878 1 to 2878 exact RefSeq, tiling clone,   2878/2878
(100 %)
4 diff
(99.9 %id)
TI_57200618   BRD9.d 4 to 751 58 to 806       749/904
(82 %)
21 diff
(97.7 %id)
BI821467 pooled brain, lung, testis BRD9.d 12 to 751 1 to 741       741/839
(88 %)
19 diff
(97.8 %id)
AK023503 placenta BRD9.d 23 to 2867 1 to 2845 exact available from FLJ,   2845/2845
(100 %)
2 diff
(100.0 %id)
DB199560 trachea BRD9.d 23 to 410 2 to 389   capped   388/388
(100 %)
1 diff
(99.8 %id)
DB232772 trachea BRD9.d 23 to 573 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA357045 subthalamic nucleus BRD9.d 24 to 562 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
AU135734 placenta BRD9.d 24 to 539 2 to 519   capped   518/518
(100 %)
4 diff
(99.3 %id)
DA015253 adrenal gland BRD9.d 25 to 533 2 to 510   capped   509/509
(100 %)
0 diff
(100 %id)
DA996424   BRD9.d 25 to 427 2 to 404   capped   403/403
(100 %)
1 diff
(99.8 %id)
BX282371 leukocyte BRD9.d 37 to 556 1 to 520       520/520
(100 %)
0 diff
(100 %id)
DN997720 breast cancer, Mammary gland (cancer tissue) BRD9.d 37 to 654 1 to 618       618/618
(100 %)
5 diff
(99.2 %id)
DA711453   BRD9.d 41 to 511 2 to 473   capped   472/472
(100 %)
1 diff
(99.8 %id)
DA924688 small intestine BRD9.d 41 to 335 2 to 296   capped   295/295
(100 %)
0 diff
(100 %id)
DB461346 testis BRD9.d 43 to 522 1 to 480       480/480
(100 %)
0 diff
(100 %id)
DA690029   BRD9.d 44 to 515 2 to 474   capped   473/473
(100 %)
2 diff
(99.6 %id)
BU070745 insulinoma, Pancreas BRD9.d 59 to 359 310 to 10     Submitted on the opposite strand 301/310
(97 %)
0 diff
(100 %id)
CN311107 embryonic stem cells, cell lines H1, H7, andH9 BRD9.d 110 to 288 1 to 180       180/180
(100 %)
2 diff
(98.9 %id)
AW026762 pooled germ cell tumors BRD9.d 140 to 365 237 to 12   AAA   226/226
(100 %)
0 diff
(100 %id)
AI969749 pooled germ cell tumors BRD9.d 142 to 365 224 to 1       224/224
(100 %)
0 diff
(100 %id)
AI990617 pooled germ cell tumors BRD9.d 142 to 365 224 to 1       224/224
(100 %)
0 diff
(100 %id)
BF592781 pooled germ cell tumors BRD9.d 142 to 365 224 to 1       224/224
(100 %)
0 diff
(100 %id)
DW421473 Liver BRD9.d 148 to 433 10 to 294       285/297
(95 %)
13 diff
(95.7 %id)
AA877893 colon, colon tumor RER+ BRD9.d 157 to 356 211 to 12   AAA   200/298
(67 %)
0 diff
(100 %id)
EC455587 Prostate BRD9.d 163 to 261 1 to 99       99/99
(100 %)
0 diff
(100 %id)
AI653209 pooled germ cell tumors BRD9.d 175 to 365 191 to 1       191/191
(100 %)
0 diff
(100 %id)
DY655092 pooled BRD9.d 189 to 550 362 to 1       362/488
(74 %)
0 diff
(100 %id)
DW448302 Liver BRD9.d 219 to 354 23 to 158   AAA   136/158
(86 %)
15 diff
(90.6 %id)
DW455793 Liver BRD9.d 219 to 370 23 to 172       150/172
(87 %)
6 diff
(96.6 %id)
DW457967 Liver BRD9.d 219 to 354 23 to 158       136/158
(86 %)
6 diff
(96.3 %id)
DW455014 Liver BRD9.d 233 to 399 11 to 177       167/177
(94 %)
6 diff
(96.7 %id)
DW456198 Liver BRD9.d 263 to 416 17 to 170       154/170
(90 %)
6 diff
(96.5 %id)
DW456582 Liver BRD9.d 263 to 414 17 to 168       152/168
(90 %)
6 diff
(96.5 %id)
BE336690 Kidney, renal cell adenocarcinoma BRD9.d 278 to 892 1 to 615   available from MGC,   615/615
(100 %)
0 diff
(100 %id)
AL567063 brain, fetal brain BRD9.d 691 to 1293 365 to 965       601/707
(85 %)
30 diff
(95.8 %id)
BM049784 carcinoma, cell line, Prostate BRD9.d 816 to 1388 1 to 574       574/730
(78 %)
10 diff
(98.7 %id)
BQ719415 sympathetic trunk BRD9.d 906 to 1769 1 to 867       867/889
(97 %)
9 diff
(99.0 %id)
BG679563 skin, squamous cell carcinoma BRD9.d 1088 to 2003 1 to 917       917/917
(100 %)
20 diff
(97.9 %id)
TI_57183339   BRD9.d 1098 to 1880 24 to 806       783/806
(97 %)
6 diff
(99.3 %id)
BI769916 pooled lung and spleen BRD9.d 1107 to 1880 1 to 774       774/774
(100 %)
0 diff
(100 %id)
BU600368 mixed (pool of 40 RNAs) BRD9.d 1108 to 1861 1 to 767       763/812
(93 %)
27 diff
(96.7 %id)
BQ643966 hepatocellular carcinoma, cell line, Liver BRD9.d 1119 to 1954 1 to 846       846/885
(95 %)
19 diff
(97.9 %id)
BE902241 choriocarcinoma, placenta BRD9.d 1123 to 1854 1 to 744       742/966
(76 %)
18 diff
(98.2 %id)
BP269915 thyroid BRD9.d 1152 to 1729 1 to 580       580/583
(99 %)
4 diff
(99.4 %id)
H11701 whole brain BRD9.d 1153 to 1680 1 to 533       533/534
(99 %)
18 diff
(96.7 %id)
BG683044 brain, neuroblastoma, cell line BRD9.d 1171 to 2040 1 to 864       864/868
(99 %)
12 diff
(98.7 %id)
BU188161 leiomyosarcoma, uterus BRD9.d 1171 to 1822 1 to 653       653/653
(100 %)
1 diff
(99.9 %id)
BQ956955 brain, neuroblastoma, cell line BRD9.d 1173 to 2040 1 to 868       868/926
(93 %)
4 diff
(99.6 %id)
BG385848 adenocarcinoma cell line, colon BRD9.d 1174 to 1883 1 to 706       706/708
(99 %)
13 diff
(98.2 %id)
CU456192 epidermis BRD9.d 1230 to 1918 22 to 710       689/724
(95 %)
9 diff
(98.8 %id)
BF734321 amnion_normal BRD9.d 1235 to 1753 1 to 519       519/519
(100 %)
5 diff
(99.1 %id)
BE786699 large cell carcinoma, lung BRD9.d 1278 to 1951 1 to 676       676/676
(100 %)
4 diff
(99.5 %id)
BF082851 breast BRD9.d 1294 to 1406 113 to 1       113/113
(100 %)
1 diff
(99.2 %id)
CX754725 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass BRD9.d 1326 to 2026 1 to 700       700/701
(99 %)
2 diff
(99.8 %id)
R15984 whole brain BRD9.d 1329 to 1815 1 to 495       495/499
(99 %)
18 diff
(96.4 %id)
BM726570 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid BRD9.d 1348 to 1960 1 to 613       613/613
(100 %)
3 diff
(99.6 %id)
AA309774   BRD9.d 1350 to 1768 1 to 422       422/422
(100 %)
2 diff
(99.6 %id)
BI113757 muscle, rhabdomyosarcoma BRD9.d 1377 to 2040 1 to 669       669/671
(99 %)
11 diff
(98.4 %id)
R94244 liver and spleen BRD9.d 1395 to 1740 1 to 353       353/359
(98 %)
12 diff
(96.7 %id)
BG287494 bladder, transitional cell papilloma, cell line BRD9.d 1428 to 2163 1 to 734       734/951
(77 %)
16 diff
(98.4 %id)
BE167358 head_neck BRD9.d 1465 to 1732 275 to 8     Submitted on the opposite strand 268/275
(97 %)
1 diff
(99.7 %id)
BM018392 astrocytoma grade IV, cell line, brain BRD9.d 1473 to 2282 2 to 811       810/812
(99 %)
14 diff
(98.3 %id)
TI_59388980   BRD9.d 1473 to 2282 102 to 911       810/811
(99 %)
14 diff
(98.3 %id)
BG112414 Bone, osteosarcoma, cell line BRD9.d 1474 to 2167 1 to 695       692/957
(72 %)
47 diff
(95.1 %id)
AV658740 corresponding non cancerous liver tissue BRD9.d 1495 to 2122 1 to 628     Submitted on the opposite strand 628/628
(100 %)
8 diff
(98.8 %id)
CN311108 embryonic stem cells, DMSO-treated H9 cellline BRD9.d 1501 to 1947 1 to 447       447/447
(100 %)
0 diff
(100 %id)
BM751195 Ascites, stomach BRD9.d 1514 to 1985 1 to 481       480/481
(99 %)
21 diff
(95.7 %id)
CB117909 brain BRD9.d 1525 to 1782 1 to 258       258/258
(100 %)
0 diff
(100 %id)
BU598707 mixed (pool of 40 RNAs) BRD9.d 1530 to 2335 1 to 824       824/857
(96 %)
33 diff
(96.2 %id)
W26248 eye, retina BRD9.d 1547 to 2013 26 to 498       473/590
(80 %)
18 diff
(97.0 %id)
BF872075 lung_tumor BRD9.d 1558 to 1949 392 to 1     Submitted on the opposite strand 392/392
(100 %)
0 diff
(100 %id)
BE728267 melanotic melanoma, skin BRD9.d 1579 to 2361 1 to 785       785/789
(99 %)
22 diff
(97.3 %id)
AA305706 colon BRD9.d 1585 to 1965 8 to 388       381/388
(98 %)
7 diff
(98.2 %id)
R35702 whole brain BRD9.d 1585 to 1965 1 to 392       392/394
(99 %)
15 diff
(96.2 %id)
BI114143 muscle, rhabdomyosarcoma BRD9.d 1597 to 2312 1 to 716       716/726
(98 %)
5 diff
(99.4 %id)
W28327 eye, retina BRD9.d 1611 to 2099 495 to 9       487/576
(84 %)
20 diff
(96.6 %id)
BF768872 epid_tumor BRD9.d 1616 to 1872 298 to 42     Submitted on the opposite strand 256/313
(81 %)
3 diff
(99.1 %id)
CX870795 embryonic stem BRD9.d 1616 to 2365 1 to 750       750/750
(100 %)
0 diff
(100 %id)
AA350907 brain BRD9.d 1622 to 1965 1 to 344       344/344
(100 %)
1 diff
(99.8 %id)
BF840595 head_neck BRD9.d 1623 to 1854 17 to 246       230/246
(93 %)
9 diff
(96.4 %id)
AA353811   BRD9.d 1636 to 1857 1 to 222       222/222
(100 %)
0 diff
(100 %id)
T83560 liver and spleen BRD9.d 1638 to 1961 1 to 332       332/403
(82 %)
16 diff
(96.1 %id)
CB116761 Liver BRD9.d 1722 to 2290 67 to 635       572/635
(90 %)
10 diff
(98.5 %id)
CD631781   BRD9.d 1732 to 2459 1 to 726       726/726
(100 %)
6 diff
(99.2 %id)
H87098 eye, retina BRD9.d 1748 to 2119 1 to 381       381/382
(99 %)
15 diff
(96.1 %id)
BF869847 lung_tumor BRD9.d 1750 to 1949 200 to 1     Submitted on the opposite strand 200/200
(100 %)
3 diff
(98.5 %id)
AW968310   BRD9.d 1757 to 2462 1 to 706       706/706
(100 %)
17 diff
(97.6 %id)
AA258913 germinal center B cell BRD9.d 1757 to 2250 1 to 494       494/494
(100 %)
3 diff
(99.4 %id)
DT219707 brain BRD9.d 1765 to 2399 1 to 635       635/635
(100 %)
2 diff
(99.7 %id)
AW405890 lymph BRD9.d 1766 to 2212 1 to 447       447/447
(100 %)
5 diff
(98.9 %id)
TI_154143294   BRD9.d 1772 to 2339 78 to 647       570/574
(99 %)
9 diff
(98.5 %id)
CN311110 embryonic stem cells, DMSO-treated H9 cellline BRD9.d 1817 to 2217 1 to 401       401/401
(100 %)
1 diff
(99.8 %id)
BE933975 head_neck BRD9.d 1829 to 2188 363 to 1       363/365
(99 %)
5 diff
(98.7 %id)
BX401981   BRD9.d 1872 to 2812 943 to 1       943/1012
(93 %)
33 diff
(96.8 %id)
AL567062 brain, fetal brain BRD9.d 1880 to 2593 957 to 246       712/723
(98 %)
69 diff
(90.5 %id)
BX445072 brain, fetal brain BRD9.d 1881 to 2831 953 to 1       953/961
(99 %)
35 diff
(96.4 %id)
TI_149312724   BRD9.d 1892 to 2867 1044 to 84   AAA   961/1006
(95 %)
20 diff
(98.1 %id)
TI_149302927   BRD9.d 1914 to 2866 998 to 63   AAA   936/1001
(93 %)
25 diff
(97.6 %id)
BM795333 Ascites, stomach BRD9.d 1932 to 2362 1 to 431       431/431
(100 %)
0 diff
(100 %id)
BE891348 melanotic melanoma, skin BRD9.d 1944 to 2655 1 to 717       717/904
(79 %)
13 diff
(98.6 %id)
TI_149291542   BRD9.d 1968 to 2866 947 to 60   AAA   888/913
(97 %)
17 diff
(98.2 %id)
TI_149273489   BRD9.d 1981 to 2865 960 to 84   AAA   877/1034
(84 %)
17 diff
(98.4 %id)
BE831343 marrow BRD9.d 2008 to 2330 9 to 331       323/331
(97 %)
0 diff
(100 %id)
BG683700 brain, neuroblastoma, cell line BRD9.d 2039 to 2803 784 to 1       784/993
(78 %)
18 diff
(98.2 %id)
BM681228 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid BRD9.d 2271 to 2867 615 to 19   AAA   597/597
(100 %)
0 diff
(100 %id)
R49338 whole brain BRD9.d 2492 to 2866 391 to 10       382/393
(97 %)
0 diff
(100 %id)
H11613 whole brain BRD9.d 2566 to 2866 312 to 10       303/312
(97 %)
0 diff
(100 %id)
R15983 whole brain BRD9.d 2589 to 2866 294 to 15   AAA   280/280
(100 %)
3 diff
(99.0 %id)
AA258151 germinal center B cell BRD9.d 2634 to 2869 236 to 1       236/236
(100 %)
2 diff
(99.2 %id)
BC041590 Brain, astrocytoma, grade IV BRD9.e 1 to 2373 1 to 2374 exact tiling clone, available from MGC, AAA   2374/2374
(100 %)
1 diff
(100.0 %id)
TI_1948225785   BRD9.e 201 to 925 127 to 850   fully sequenced,   724/850
(85 %)
8 diff
(99.1 %id)
TI_1948225929   BRD9.e 201 to 990 124 to 911   fully sequenced,   788/911
(86 %)
8 diff
(99.2 %id)
TI_1948226074   BRD9.e 201 to 892 125 to 816       692/1419
(48 %)
10 diff
(99.3 %id)
TI_1948226223   BRD9.e 201 to 956 125 to 882   fully sequenced,   758/882
(85 %)
10 diff
(98.9 %id)
TI_1948226075   BRD9.e 888 to 1645 879 to 122       758/1251
(60 %)
10 diff
(99.3 %id)
TI_1948225786   BRD9.e 890 to 1645 881 to 125   fully sequenced,   757/881
(85 %)
6 diff
(99.4 %id)
TI_1948226224   BRD9.e 926 to 1645 847 to 124   fully sequenced,   724/847
(85 %)
4 diff
(99.6 %id)
TI_1948225930   BRD9.e 960 to 1645 813 to 127   fully sequenced,   687/813
(84 %)
1 diff
(99.9 %id)
BE831306 marrow BRD9.e 1545 to 1881 37 to 373       337/373
(90 %)
6 diff
(98.4 %id)
BG115157 duodenal adenocarcinoma, cell line, small intestine BRD9.e 1545 to 2333 15 to 818       804/848
(94 %)
28 diff
(96.7 %id)
TI_149289009   BRD9.e 1554 to 2373 897 to 83   AAA   815/816
(99 %)
14 diff
(98.3 %id)
TI_154103598   BRD9.e 1588 to 2373 857 to 83   AAA   775/818
(94 %)
32 diff
(96.1 %id)
CD631780   BRD9.e 1591 to 2161 576 to 5       572/576
(99 %)
7 diff
(98.8 %id)
BE831300 marrow BRD9.e 1592 to 1848 1 to 259       259/259
(100 %)
6 diff
(97.7 %id)
W94034 heart BRD9.e 1609 to 1951 1 to 348   fully sequenced,   348/348
(100 %)
6 diff
(98.3 %id)
BF921448 nervous_tumor BRD9.e 1631 to 2209 18 to 594       577/594
(97 %)
6 diff
(99.0 %id)
BM981033 lung, Primary Lung Cystic Fibrosis EpithelialCells BRD9.e 1651 to 2374 742 to 19   AAA   724/724
(100 %)
1 diff
(99.9 %id)
TI_149289978   BRD9.e 1660 to 2373 790 to 79   AAA   712/713
(99 %)
5 diff
(99.3 %id)
BM974156 lung BRD9.e 1661 to 2372 728 to 19   AAA   710/710
(100 %)
5 diff
(99.3 %id)
TI_149285804   BRD9.e 1673 to 2373 787 to 88   AAA   700/701
(99 %)
4 diff
(99.5 %id)
AI871487 anaplastic oligodendroglioma, brain BRD9.e 1684 to 2218 1 to 536     Submitted on the opposite strand 536/536
(100 %)
2 diff
(99.7 %id)
BM978275 lung BRD9.e 1690 to 2373 701 to 19   AAA   683/683
(100 %)
2 diff
(99.8 %id)
BU624616 cell lines, Enchondroma BRD9.e 1690 to 2373 702 to 19   AAA   684/684
(100 %)
0 diff
(100 %id)
BM970710 lung BRD9.e 1691 to 2373 700 to 19   AAA   682/689
(98 %)
4 diff
(99.5 %id)
AA989044 carcinoid, lung BRD9.e 1695 to 2071 1 to 375     Submitted on the opposite strand 375/375
(100 %)
5 diff
(98.7 %id)
BE504102 carcinoid, lung BRD9.e 1695 to 2063 1 to 368     Submitted on the opposite strand 368/370
(99 %)
10 diff
(97.3 %id)
BU675854 lung, Primary Lung Epithelial Cells BRD9.e 1695 to 2373 696 to 19   AAA   678/678
(100 %)
1 diff
(99.9 %id)
BM973117 lung BRD9.e 1697 to 2373 694 to 19   AAA   676/676
(100 %)
1 diff
(99.9 %id)
CA428024 Bone, Subchondral Bone BRD9.e 1698 to 2373 694 to 19   AAA   676/676
(100 %)
2 diff
(99.8 %id)
AI696485 carcinoid, lung BRD9.e 1700 to 2172 1 to 474     Submitted on the opposite strand 474/474
(100 %)
1 diff
(99.8 %id)
CA439603 lung, Lung Focal Fibrosis BRD9.e 1707 to 2373 685 to 19   AAA   667/667
(100 %)
2 diff
(99.8 %id)
BM714879 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid BRD9.e 1723 to 2373 1 to 651       651/653
(99 %)
3 diff
(99.6 %id)
BG574571 breast, mammary adenocarcinoma, cell line BRD9.e 1728 to 2372 1 to 645       645/670
(96 %)
1 diff
(99.9 %id)
AA363969 pineal body BRD9.e 1742 to 2065 1 to 326       326/326
(100 %)
3 diff
(99.1 %id)
EC485948 Prostate BRD9.e 1746 to 1844 1 to 98       98/98
(100 %)
2 diff
(98.0 %id)
CA439865 lung, Lung Focal Fibrosis BRD9.e 1748 to 2373 643 to 19   AAA   625/625
(100 %)
3 diff
(99.6 %id)
BM719714 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid BRD9.e 1751 to 2211 1 to 461       461/461
(100 %)
0 diff
(100 %id)
BF768447 epid_tumor BRD9.e 1754 to 2330 585 to 11     Submitted on the opposite strand 575/586
(98 %)
0 diff
(100 %id)
BM971678 lung BRD9.e 1757 to 2373 635 to 19   AAA   617/617
(100 %)
1 diff
(99.9 %id)
BG830050 epithelioid carcinoma cell line, Pancreas BRD9.e 1760 to 2373 1 to 613   AAA   613/613
(100 %)
2 diff
(99.7 %id)
BQ430163 epithelioid carcinoma, Pancreas BRD9.e 1770 to 2373 1 to 604   AAA   604/604
(100 %)
0 diff
(100 %id)
AW006670 colon BRD9.e 1772 to 2373 607 to 6       602/607
(99 %)
0 diff
(100 %id)
AI949782 2 pooled tumors (clear cell type), Kidney BRD9.e 1780 to 2373 599 to 6       594/599
(99 %)
0 diff
(100 %id)
BM994878 lung, Lung Focal Fibrosis BRD9.e 1803 to 2373 590 to 19   AAA   572/572
(100 %)
6 diff
(99.0 %id)
BQ016761 lung, Lung Focal Fibrosis BRD9.e 1803 to 2373 589 to 19   AAA   571/571
(100 %)
2 diff
(99.7 %id)
BE810889 amnion_normal BRD9.e 1814 to 2251 1 to 438       438/438
(100 %)
6 diff
(98.7 %id)
TI_151755484   BRD9.e 1814 to 2373 687 to 122   AAA   566/1285
(44 %)
21 diff
(98.4 %id)
AW024662 Kidney BRD9.e 1818 to 2373 558 to 3       556/558
(99 %)
0 diff
(100 %id)
BE831898 marrow BRD9.e 1825 to 2182 15 to 378       364/378
(96 %)
6 diff
(98.5 %id)
AI193629 lung BRD9.e 1826 to 2372 547 to 1       547/547
(100 %)
0 diff
(100 %id)
BG149702 carcinoid, lung BRD9.e 1826 to 2373 552 to 5       548/552
(99 %)
0 diff
(100 %id)
BE855949 Prostate BRD9.e 1827 to 2373 558 to 11   AAA   548/548
(100 %)
3 diff
(99.5 %id)
BE552324 pooled germ cell tumors BRD9.e 1828 to 2373 546 to 1       546/546
(100 %)
0 diff
(100 %id)
DB295793   BRD9.e 1836 to 2373 538 to 1       538/538
(100 %)
0 diff
(100 %id)
AA535347 colon BRD9.e 1843 to 2373 533 to 2       532/533
(99 %)
0 diff
(100 %id)
BE810984 amnion_normal BRD9.e 1845 to 2221 9 to 385       377/385
(97 %)
6 diff
(98.5 %id)
BE810940 amnion_normal BRD9.e 1847 to 1946 1 to 101       101/114
(88 %)
3 diff
(97.4 %id)
AI971127 Prostate BRD9.e 1852 to 2373 522 to 1       522/522
(100 %)
1 diff
(99.9 %id)
BE810919 amnion_normal BRD9.e 1853 to 2250 401 to 5       397/401
(99 %)
0 diff
(100 %id)
AI333357 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BRD9.e 1860 to 2373 515 to 2       514/515
(99 %)
0 diff
(100 %id)
AI767648 Kidney BRD9.e 1860 to 2372 518 to 6       513/518
(99 %)
0 diff
(100 %id)
BQ959857 epidermoid carcinoma, cell line, lung BRD9.e 1865 to 2373 1 to 509       509/1052
(48 %)
12 diff
(98.9 %id)
AI147863 uterus BRD9.e 1870 to 2373 505 to 2       504/505
(99 %)
0 diff
(100 %id)
AI583192 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) BRD9.e 1870 to 2373 516 to 13   AAA   504/504
(100 %)
0 diff
(100 %id)
BE810971 amnion_normal BRD9.e 1880 to 2218 340 to 1       340/340
(100 %)
6 diff
(98.3 %id)
AA644595 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BRD9.e 1882 to 2270 1 to 385       385/385
(100 %)
6 diff
(98.5 %id)
DB371954 ovary, tumor tissue BRD9.e 1882 to 2373 493 to 1       493/570
(86 %)
25 diff
(95.7 %id)
BE810895 amnion_normal BRD9.e 1887 to 2251 365 to 1       365/365
(100 %)
1 diff
(99.8 %id)
DB523375 testis BRD9.e 1891 to 2373 1 to 483     Submitted on the opposite strand 483/483
(100 %)
0 diff
(100 %id)
BG424771 Kidney, renal cell adenocarcinoma BRD9.e 1891 to 2669 1 to 767   tiling clone,   767/767
(100 %)
18 diff
(97.7 %id)
BE810890 amnion_normal BRD9.e 1893 to 2251 1 to 359       359/359
(100 %)
4 diff
(98.9 %id)
BE810954 amnion_normal BRD9.e 1893 to 2251 1 to 360       360/360
(100 %)
3 diff
(99.2 %id)
BE811018 amnion_normal BRD9.e 1893 to 2251 12 to 371       360/371
(97 %)
6 diff
(98.4 %id)
AI638183 pooled germ cell tumors BRD9.e 1895 to 2373 479 to 1       479/479
(100 %)
0 diff
(100 %id)
AI565991 Kidney BRD9.e 1896 to 2373 481 to 4       478/481
(99 %)
0 diff
(100 %id)
AI588854 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors BRD9.e 1896 to 2373 488 to 13   AAA   476/476
(100 %)
2 diff
(99.6 %id)
AW151055 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors BRD9.e 1896 to 2379 489 to 6       484/489
(98 %)
0 diff
(100 %id)
BF447082 Prostate BRD9.e 1896 to 2373 483 to 6       478/483
(98 %)
0 diff
(100 %id)
BE810881 amnion_normal BRD9.e 1900 to 2218 323 to 4       320/323
(99 %)
0 diff
(100 %id)
AI093968 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BRD9.e 1900 to 2373 474 to 2       473/474
(99 %)
0 diff
(100 %id)
AI951463 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary BRD9.e 1900 to 2379 488 to 9       480/488
(98 %)
0 diff
(100 %id)
BE810910 amnion_normal BRD9.e 1902 to 2251 1 to 349       349/349
(100 %)
1 diff
(99.8 %id)
BE810944 amnion_normal BRD9.e 1902 to 2247 1 to 344       344/344
(100 %)
3 diff
(99.2 %id)
W60710 heart BRD9.e 1902 to 2373 481 to 1       481/515
(93 %)
12 diff
(97.7 %id)
BE810922 amnion_normal BRD9.e 1903 to 2024 14 to 134       121/148
(81 %)
14 diff
(90.6 %id)
BF057865 pooled germ cell tumors BRD9.e 1903 to 2373 471 to 1       471/471
(100 %)
0 diff
(100 %id)
AI125927 uterus BRD9.e 1904 to 2373 470 to 1       470/470
(100 %)
0 diff
(100 %id)
AW196979 pooled germ cell tumors BRD9.e 1905 to 2373 470 to 2       469/470
(99 %)
0 diff
(100 %id)
BE550459 pooled germ cell tumors BRD9.e 1906 to 2372 467 to 1       467/467
(100 %)
3 diff
(99.4 %id)
BE810891 amnion_normal BRD9.e 1908 to 2251 1 to 344       344/344
(100 %)
1 diff
(99.8 %id)
BE810915 amnion_normal BRD9.e 1908 to 2255 346 to 2       345/346
(99 %)
0 diff
(100 %id)
BE810926 amnion_normal BRD9.e 1908 to 2255 351 to 3       349/351
(99 %)
0 diff
(100 %id)
BE810931 amnion_normal BRD9.e 1908 to 2094 1 to 187       187/187
(100 %)
2 diff
(99.0 %id)
BE810941 amnion_normal BRD9.e 1908 to 2255 354 to 7       348/354
(98 %)
0 diff
(100 %id)
BE810946 amnion_normal BRD9.e 1908 to 2255 356 to 9       348/356
(97 %)
0 diff
(100 %id)
BE810947 amnion_normal BRD9.e 1908 to 2250 350 to 11       340/350
(97 %)
0 diff
(100 %id)
BE810948 amnion_normal BRD9.e 1908 to 2071 1 to 164       164/164
(100 %)
0 diff
(100 %id)
BE810952 amnion_normal BRD9.e 1908 to 2052 1 to 145       145/145
(100 %)
0 diff
(100 %id)
BE810956 amnion_normal BRD9.e 1908 to 2250 351 to 10       342/351
(97 %)
0 diff
(100 %id)
BE810964 amnion_normal BRD9.e 1908 to 2204 308 to 6       303/308
(98 %)
0 diff
(100 %id)
BE810965 amnion_normal BRD9.e 1908 to 2192 288 to 2       287/288
(99 %)
0 diff
(100 %id)
BE810970 amnion_normal BRD9.e 1908 to 2231 331 to 11       321/331
(96 %)
0 diff
(100 %id)
BE810982 amnion_normal BRD9.e 1908 to 2240 339 to 6       334/339
(98 %)
0 diff
(100 %id)
BE810986 amnion_normal BRD9.e 1908 to 2135 1 to 229       229/229
(100 %)
6 diff
(97.4 %id)
BE810994 amnion_normal BRD9.e 1908 to 2250 1 to 343       343/344
(99 %)
4 diff
(98.9 %id)
BE810996 amnion_normal BRD9.e 1908 to 2246 1 to 339       339/339
(100 %)
1 diff
(99.8 %id)
BE811000 amnion_normal BRD9.e 1908 to 2255 354 to 8       347/354
(98 %)
0 diff
(100 %id)
BE811017 amnion_normal BRD9.e 1908 to 2250 351 to 8       344/351
(98 %)
0 diff
(100 %id)
BE811021 amnion_normal BRD9.e 1908 to 2059 1 to 155       155/155
(100 %)
9 diff
(94.2 %id)
BE831947 marrow BRD9.e 1908 to 2249 374 to 29       346/374
(92 %)
0 diff
(100 %id)
BF325598 amnion_normal BRD9.e 1908 to 2255 348 to 4       345/348
(99 %)
0 diff
(100 %id)
BF325599 amnion_normal BRD9.e 1908 to 2071 166 to 2       165/166
(99 %)
0 diff
(100 %id)
CA445835 Chondrosarcoma, Left Pelvis BRD9.e 1908 to 2373 484 to 19   AAA   466/466
(100 %)
1 diff
(99.8 %id)
BU161664 eye, retinoblastoma BRD9.e 1910 to 2373 1 to 464   AAA   464/464
(100 %)
0 diff
(100 %id)
DB526758 testis BRD9.e 1911 to 2373 1 to 463     Submitted on the opposite strand 463/463
(100 %)
0 diff
(100 %id)
DB527126 testis BRD9.e 1914 to 2373 1 to 460     Submitted on the opposite strand 460/460
(100 %)
0 diff
(100 %id)
AI991530 Kidney BRD9.e 1914 to 2371 458 to 1       458/458
(100 %)
0 diff
(100 %id)
BE810938 amnion_normal BRD9.e 1916 to 2250 339 to 6       334/339
(98 %)
0 diff
(100 %id)
DB558971 hypothalamus BRD9.e 1919 to 2373 1 to 455     Submitted on the opposite strand 455/455
(100 %)
2 diff
(99.6 %id)
BQ291786 amnion_normal BRD9.e 1921 to 2139 39 to 263       225/263
(85 %)
6 diff
(97.8 %id)
W94035 heart BRD9.e 1921 to 2374 458 to 1   fully sequenced,   458/458
(100 %)
6 diff
(98.7 %id)
BE810991 amnion_normal BRD9.e 1930 to 2231 1 to 302       302/302
(100 %)
3 diff
(99.1 %id)
AI190463 heart BRD9.e 1930 to 2373 444 to 1       444/444
(100 %)
2 diff
(99.6 %id)
BE810955 amnion_normal BRD9.e 1936 to 2251 1 to 317       317/317
(100 %)
3 diff
(99.1 %id)
AA719144   BRD9.e 1939 to 2373 445 to 12   AAA   434/434
(100 %)
1 diff
(99.8 %id)
AI074051 senescent fibroblast BRD9.e 1939 to 2373 440 to 6       435/440
(98 %)
0 diff
(100 %id)
BE810961 amnion_normal BRD9.e 1944 to 2207 265 to 1       265/265
(100 %)
7 diff
(97.4 %id)
EL948089 eyeball BRD9.e 1945 to 2374 43 to 467   AAA   425/467
(91 %)
6 diff
(98.8 %id)
BG926620 cartilage BRD9.e 1946 to 2373 561 to 134   AAA   428/428
(100 %)
0 diff
(100 %id)
AA775644 heart BRD9.e 1946 to 2373 430 to 4       427/430
(99 %)
0 diff
(100 %id)
BE811019 amnion_normal BRD9.e 1949 to 2258 1 to 310       310/318
(97 %)
7 diff
(97.8 %id)
AW027763 Kidney BRD9.e 1956 to 2373 423 to 6       418/423
(98 %)
0 diff
(100 %id)
AA838798 parathyroid gland, parathyroid tumor BRD9.e 1961 to 2373 419 to 8       412/419
(98 %)
0 diff
(100 %id)
BE243378 leukopheresis BRD9.e 1961 to 2377 418 to 2       417/418
(99 %)
0 diff
(100 %id)
AJ714571 bone marrow BRD9.e 1962 to 2272 1 to 311       311/311
(100 %)
2 diff
(99.4 %id)
AW005337 anaplastic oligodendroglioma, brain BRD9.e 1963 to 2364 426 to 25   AAA   402/411
(97 %)
0 diff
(100 %id)
BQ218037 epithelioid carcinoma, Pancreas BRD9.e 1968 to 2373 1 to 406   AAA   406/406
(100 %)
1 diff
(99.8 %id)
BF591207 colon, colon tumor, RER+ BRD9.e 1978 to 2373 398 to 3       396/398
(99 %)
0 diff
(100 %id)
AI263397 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BRD9.e 1986 to 2373 399 to 12   AAA   388/388
(100 %)
0 diff
(100 %id)
BE810899 amnion_normal BRD9.e 1987 to 2255 278 to 10       269/278
(96 %)
0 diff
(100 %id)
BE810957 amnion_normal BRD9.e 1987 to 2226 240 to 3       238/240
(99 %)
0 diff
(100 %id)
BE810990 amnion_normal BRD9.e 1987 to 2251 265 to 1       265/265
(100 %)
2 diff
(99.3 %id)
BQ291568 amnion_normal BRD9.e 1987 to 2251 1 to 271       271/271
(100 %)
16 diff
(94.1 %id)
AI142794 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BRD9.e 1993 to 2373 380 to 1       380/380
(100 %)
1 diff
(99.8 %id)
AA988470 carcinoid, lung BRD9.e 1996 to 2372 377 to 2       376/377
(99 %)
0 diff
(100 %id)
AA760757 germinal center B cell BRD9.e 2003 to 2373 409 to 39   AAA   371/371
(100 %)
0 diff
(100 %id)
DB314408 tongue, tumor tissue BRD9.e 2005 to 2373 369 to 1       369/369
(100 %)
0 diff
(100 %id)
AW105263 ovary, tumor, 5 pooled (see description) BRD9.e 2006 to 2373 369 to 2       368/369
(99 %)
0 diff
(100 %id)
BE810912 amnion_normal BRD9.e 2011 to 2239 1 to 229       229/229
(100 %)
0 diff
(100 %id)
AI911730 pooled BRD9.e 2017 to 2373 374 to 17   AAA   358/358
(100 %)
2 diff
(99.5 %id)
AI675071 Prostate BRD9.e 2019 to 2373 354 to 1       354/354
(100 %)
3 diff
(99.2 %id)
BE810942 amnion_normal BRD9.e 2020 to 2188 1 to 169       169/169
(100 %)
2 diff
(98.9 %id)
AI263814 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BRD9.e 2022 to 2372 352 to 1       352/352
(100 %)
1 diff
(99.8 %id)
BE811002 amnion_normal BRD9.e 2023 to 2198 184 to 6       179/184
(97 %)
0 diff
(100 %id)
AA425943   BRD9.e 2025 to 2369 350 to 6       345/351
(98 %)
0 diff
(100 %id)
BE810932 amnion_normal BRD9.e 2027 to 2251 11 to 233       223/233
(95 %)
6 diff
(97.5 %id)
BM271966 Pancreas, Purified pancreatic islet BRD9.e 2027 to 2373 11 to 357   AAA   347/357
(97 %)
6 diff
(98.4 %id)
CK824888 Pancreas, Purified pancreatic islet BRD9.e 2027 to 2373 358 to 12   AAA Submitted on the opposite strand 347/359
(96 %)
0 diff
(100 %id)
AA480639 colon BRD9.e 2028 to 2373 368 to 23   AAA   346/346
(100 %)
0 diff
(100 %id)
AI991668 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) BRD9.e 2028 to 2373 354 to 9       346/354
(97 %)
0 diff
(100 %id)
BF062597 colon, colon tumor, RER+ BRD9.e 2030 to 2373 361 to 17   AAA   345/345
(100 %)
3 diff
(99.2 %id)
AI080301 senescent fibroblast BRD9.e 2031 to 2373 348 to 6       343/348
(98 %)
0 diff
(100 %id)
AA350906 brain BRD9.e 2033 to 2374 342 to 1       342/342
(100 %)
2 diff
(99.5 %id)
BE810894 amnion_normal BRD9.e 2035 to 2258 232 to 10       223/232
(96 %)
0 diff
(100 %id)
H87745.
matches multiple genes
eye, retina BRD9.e 2037 to 2370 336 to 1     also hits gene FAM76A 336/340
(98 %)
4 diff
(98.9 %id)
AI090843   BRD9.e 2043 to 2375 341 to 9       333/341
(97 %)
0 diff
(100 %id)
BM929827 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid BRD9.e 2047 to 2373 1 to 327   AAA   327/327
(100 %)
0 diff
(100 %id)
BE810989 amnion_normal BRD9.e 2061 to 2251 1 to 190       190/190
(100 %)
1 diff
(99.5 %id)
AI474642 Kidney BRD9.e 2063 to 2373 312 to 1       312/312
(100 %)
1 diff
(99.7 %id)
AI991672 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) BRD9.e 2063 to 2373 320 to 9       312/320
(97 %)
0 diff
(100 %id)
AA805729 germinal center B cell BRD9.e 2064 to 2373 332 to 23   AAA   310/310
(100 %)
0 diff
(100 %id)
AA952912 pooled BRD9.e 2064 to 2369 306 to 1       306/306
(100 %)
0 diff
(100 %id)
AI538422 B-cell, chronic lymphotic leukemia BRD9.e 2064 to 2364 344 to 44   AAA   301/310
(97 %)
0 diff
(100 %id)
AW008421 poorly differentiated adenocarcinoma withsignet ring cell features, stomach BRD9.e 2064 to 2364 344 to 43   AAA   302/311
(97 %)
0 diff
(100 %id)
AA721192 germinal center B cell BRD9.e 2065 to 2373 334 to 26   AAA   309/309
(100 %)
0 diff
(100 %id)
AW015708   BRD9.e 2066 to 2373 325 to 18   AAA   308/318
(96 %)
0 diff
(100 %id)
CV309278 amnion_normal BRD9.e 2067 to 2223 204 to 43     Submitted on the opposite strand 325/397
(81 %)
21 diff
(94.8 %id)
AA765428 germinal center B cell BRD9.e 2075 to 2373 324 to 26   AAA   299/299
(100 %)
0 diff
(100 %id)
BM264595 Pancreas, Purified pancreatic islet BRD9.e 2089 to 2373 288 to 4       285/288
(98 %)
0 diff
(100 %id)
CK824887 Pancreas, Purified pancreatic islet BRD9.e 2093 to 2373 1 to 281     Submitted on the opposite strand 281/281
(100 %)
0 diff
(100 %id)
BE810916 amnion_normal BRD9.e 2102 to 2250 159 to 15       145/159
(91 %)
0 diff
(100 %id)
BE810968 amnion_normal BRD9.e 2102 to 2251 150 to 1       150/150
(100 %)
2 diff
(98.7 %id)
BE810953 amnion_normal BRD9.e 2115 to 2250 144 to 10       135/144
(93 %)
0 diff
(100 %id)
BX374542 Neuroblastoma Cot 10-normalized BRD9.e 2117 to 2373 1 to 257       257/257
(100 %)
0 diff
(100 %id)
BE810886 amnion_normal BRD9.e 2130 to 2258 134 to 6       129/134
(96 %)
0 diff
(100 %id)
AI611247 Prostate BRD9.e 2131 to 2373 243 to 1       243/243
(100 %)
0 diff
(100 %id)
BQ291787 amnion_normal BRD9.e 2154 to 2258 1 to 106       106/119
(89 %)
6 diff
(95.0 %id)
AI675710 Prostate BRD9.e 2166 to 2373 208 to 1       208/208
(100 %)
0 diff
(100 %id)
AW001724 Kidney BRD9.e 2167 to 2364 235 to 38   AAA   198/207
(95 %)
0 diff
(100 %id)
BI820273 pooled brain, lung, testis BRD9.e 2209 to 2373 1 to 166       166/218
(76 %)
5 diff
(97.8 %id)
AA730440 Ewing's sarcoma BRD9.e 2211 to 2373 174 to 13   AAA   162/162
(100 %)
1 diff
(99.4 %id)
AA996364 carcinoid, lung BRD9.e 2217 to 2372 157 to 2       156/157
(99 %)
0 diff
(100 %id)
AI206738   BRD9.e 2231 to 2373 165 to 23   AAA   143/143
(100 %)
1 diff
(99.4 %id)
BF062423 colon, colon tumor, RER+ BRD9.e 2270 to 2373 120 to 17   AAA   104/104
(100 %)
0 diff
(100 %id)
BG423205 Kidney, renal cell adenocarcinoma BRD9.e 2476 to 2672 607 to 803   tiling clone,   733/858
(85 %)
60 diff
(93.1 %id)
BX648703 human testis BRD9.f 1 to 3172 1 to 3172 exact tiling clone, available from DKFZ, AAA   3172/3174
(99 %)
4 diff
(99.9 %id)
BM020966 astrocytoma grade IV, cell line, brain BRD9.f 652 to 1496 1 to 843       843/843
(100 %)
6 diff
(99.3 %id)
TI_59389082   BRD9.f 652 to 1496 103 to 945       843/843
(100 %)
6 diff
(99.3 %id)
DB259581 uterus BRD9.f 842 to 1423 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
EL736064 mixed BRD9.f 854 to 1471 1 to 618       618/622
(99 %)
6 diff
(99.1 %id)
BX348166   BRD9.f 882 to 1776 1 to 894       894/905
(98 %)
8 diff
(99.2 %id)
BX348165   BRD9.f 890 to 1768 8 to 886       879/879
(100 %)
9 diff
(99.0 %id)
AW379624 head_neck BRD9.f 1780 to 2148 28 to 399       370/409
(90 %)
15 diff
(96.4 %id)
BG979077 colon_normal BRD9.g 1 to 353 370 to 18   tiling clone,   353/370
(95 %)
0 diff
(100 %id)
BG981795 colon_normal BRD9.g 39 to 333 302 to 3       300/305
(98 %)
0 diff
(100 %id)
AK024392 placenta BRD9.g 45 to 4912 1 to 4868 exact tiling clone, available from FLJ, AAA   4868/4868
(100 %)
7 diff
(99.9 %id)
AU140800 placenta BRD9.g 46 to 857 2 to 809   capped   808/815
(99 %)
16 diff
(98.1 %id)
AW860457 colon BRD9.g 121 to 324 213 to 11       203/213
(95 %)
0 diff
(100 %id)
DA546735   BRD9.g 240 to 726 2 to 490   tiling clone, capped   489/489
(100 %)
4 diff
(99.2 %id)
BG987046 head_neck BRD9.g 1498 to 1889 41 to 432       392/432
(90 %)
6 diff
(98.7 %id)
BG987051 head_neck BRD9.g 1499 to 1848 15 to 368       354/371
(95 %)
19 diff
(94.9 %id)
BQ375853 testis_normal BRD9.g 1538 to 1849 19 to 330       312/330
(94 %)
6 diff
(98.2 %id)
BF994861 placenta_normal BRD9.g 1658 to 1790 1 to 135       135/136
(99 %)
4 diff
(97.1 %id)
AA346913 heart BRD9.g 2246 to 2461 1 to 216   tiling clone,   216/216
(100 %)
0 diff
(100 %id)
BE244137 leukopheresis BRD9.g 2521 to 2926 1 to 406       406/406
(100 %)
10 diff
(97.6 %id)
DA947592 Spleen BRD9.g 2550 to 3128 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BM833782 stomach BRD9.g 2560 to 2974 1 to 415       415/415
(100 %)
1 diff
(99.8 %id)
AU158689 placenta BRD9.g 4361 to 4912 571 to 22   AAA   550/550
(100 %)
14 diff
(97.5 %id)
DB457880 testis BRD9.h 1 to 502 1 to 502   tiling clone,   502/502
(100 %)
2 diff
(99.7 %id)
DB446555 testis BRD9.h 5 to 432 1 to 429   tiling clone,   429/429
(100 %)
1 diff
(99.8 %id)
BX445073 brain, fetal brain BRD9.h 157 to 1139 1 to 976   tiling clone,   976/976
(100 %)
14 diff
(98.6 %id)
AK301987 testis BRD9.i 1 to 1416 2 to 1417 exact tiling clone,   1417/1417
(100 %)
3 diff
(99.8 %id)
DB034943 testis BRD9.i 1 to 578 2 to 580   capped   579/580
(99 %)
2 diff
(99.7 %id)
DA501098 brain BRD9.i 21 to 583 2 to 564   tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
CD579830 brain BRD9.i 30 to 692 1 to 664       664/664
(100 %)
20 diff
(97.0 %id)
BP367531 thymus BRD9.i 1322 to 1901 1 to 579   tiling clone,   579/579
(100 %)
1 diff
(99.9 %id)
BU633973 cell lines, Chondrosarcoma BRD9.i 1810 to 2418 630 to 22   tiling clone, AAA   609/609
(100 %)
0 diff
(100 %id)
BU939845 mixed (pool of 40 RNAs) BRD9.i 2084 to 2414 1 to 331       331/1005
(32 %)
11 diff
(99.0 %id)
BE152806 head_neck BRD9.i 2155 to 2469 1 to 316   tiling clone,   316/316
(100 %)
4 diff
(98.8 %id)
DB136180 thymus BRD9.i 2447 to 2992 2 to 547   tiling clone, capped   546/546
(100 %)
0 diff
(100 %id)
AL046596 testis BRD9.i 2838 to 3453 1 to 618   tiling clone,   618/618
(100 %)
2 diff
(99.7 %id)
AY358630   BRD9.j 1 to 2211 1 to 2211 exact tiling clone,   2211/2213
(99 %)
2 diff
(100.0 %id)
BU552792 ovary, teratocarcinoma, cell line BRD9.k-u 1 to 778 1 to 784 W189X L191S E193* tiling clone,   784/923
(84 %)
16 diff
(98.3 %id)
AV685468 hepatocellular carcinoma BRD9.l 1 to 380 1 to 380       380/390
(97 %)
1 diff
(99.8 %id)
AV685475 hepatocellular carcinoma BRD9.l 1 to 380 1 to 380   tiling clone,   380/391
(97 %)
1 diff
(99.8 %id)
DB024425 testis BRD9.l 258 to 803 2 to 548   tiling clone, capped   547/547
(100 %)
3 diff
(99.5 %id)
DA736769   BRD9.m 1 to 770 2 to 768   tiling clone, capped   767/849
(90 %)
10 diff
(98.9 %id)
DA929443 small intestine BRD9.m 330 to 902 2 to 574   tiling clone, capped   573/573
(100 %)
0 diff
(100 %id)
AL833925 testis BRD9.n 1 to 743 1 to 743 exact tiling clone, available from DKFZ, AAA   743/743
(100 %)
0 diff
(100 %id)
CR741116   BRD9.o 1 to 473 1 to 473   tiling clone,   473/473
(100 %)
0 diff
(100 %id)
BX326712   BRD9.o 310 to 1173 865 to 4 N3K L10S D13A E14Q L17A ... tiling clone,   862/865
(99 %)
32 diff
(96.4 %id)
BI561999 testis BRD9.p 1 to 754 1 to 778 V18G G19R G20R S21K E22*     776/783
(99 %)
45 diff
(94.3 %id)
DB461706 testis BRD9.p 6 to 498 1 to 493 exact tiling clone,   493/493
(100 %)
1 diff
(99.8 %id)
TI_44349908   BRD9.p 6 to 754 126 to 898 V18G G19R G20R S21K E22*     771/903
(85 %)
46 diff
(95.0 %id)
DR002288 fetal brain BRD9.p 147 to 912 1 to 766   tiling clone,   766/766
(100 %)
4 diff
(99.5 %id)
AI002412 carcinoid, lung BRD9.p 664 to 812 1 to 149     Submitted on the opposite strand 149/149
(100 %)
0 diff
(100 %id)
BE043006 carcinoid, lung BRD9.p 664 to 812 1 to 149     Submitted on the opposite strand 149/149
(100 %)
0 diff
(100 %id)
DA457020 tongue, tumor tissue BRD9.q-u 1 to 580 2 to 581   tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
AA707269   BRD9.q-u 342 to 551 213 to 3       211/213
(99 %)
0 diff
(100 %id)
DA812547 ovary, tumor tissue BRD9.q-u 425 to 1131 2 to 708 exact tiling clone, capped   707/707
(100 %)
0 diff
(100 %id)
DY655091 pooled BRD9.r 1 to 335 1 to 335 S25R tiling clone,   335/335
(100 %)
3 diff
(99.2 %id)
BF943861 nervous_normal BRD9.r 234 to 336 1 to 103       103/103
(100 %)
1 diff
(99.1 %id)
DA031083   BRD9.s 1 to 557 2 to 558   tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
AK125518 placenta BRD9.s 362 to 2277 1 to 1916 exact tiling clone, available from FLJ,   1916/1916
(100 %)
1 diff
(100.0 %id)
DA850525 placenta BRD9.s 363 to 916 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA561732 heart BRD9.s 378 to 916 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
CN412654 embryonic stem cells, cell lines H1, H7, andH9 BRD9.s 698 to 1360 1 to 663       663/663
(100 %)
0 diff
(100 %id)
BQ331147 lung_tumor BRD9.s 1025 to 1450 487 to 60       428/487
(87 %)
0 diff
(100 %id)
DB328721 placenta BRD9.s 1817 to 2277 461 to 1       461/461
(100 %)
2 diff
(99.6 %id)
BU657097 blood BRD9.t-u 1 to 663 1 to 663 exact tiling clone,   663/663
(100 %)
0 diff
(100 %id)
DB149107 thymus BRD9.u-u 1 to 571 2 to 572 exact tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
BQ446526 Knee, Osteoarthritic Cartilage Gene BRD9, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BQ082244 Ascites, stomach Gene BRD9, variant not shown              
BF985458 placenta_normal Gene BRD9, variant not shown              
AU147075 whole embryo, mainly body Gene BRD9, variant not shown         Suspected internal deletion, this clone was ignored    
DA573045 whole embryo, mainly body Gene BRD9, variant not shown       capped Suspected internal deletion, this clone was ignored    
DA028032   Gene BRD9, variant not shown       capped      
TI_1210517977   Gene BRD9, variant not shown              
TI_1210517978   Gene BRD9, variant not shown              
DB108474 thymus Gene BRD9, variant not shown       capped      
DB343139 thymus Gene BRD9, variant not shown              
DB268963 uterus Gene BRD9, variant not shown       capped      
DB282795 uterus Gene BRD9, variant not shown       capped This clone was ignored    
DB352605 uterus Gene BRD9, variant not shown         This clone was ignored    
AW895189 nervous_normal Gene BRD9, variant not shown              
DW410482 Liver Gene BRD9, variant not shown              
DA205104 brain Gene BRD9, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB302138 amygdala Gene BRD9, variant not shown              
DA160891 amygdala Gene BRD9, variant not shown       capped      
BX101415 pooled Gene BRD9, variant not shown              
AI660880 colon, colonic mucosa from 3 patients with Crohn'sdisease Gene BRD9, variant not shown         Suspected internal deletion, this clone was ignored    
AI741404 pooled Gene BRD9, variant not shown       AAA      
AI741414 pooled Gene BRD9, variant not shown       AAA      
AI742012 pooled Gene BRD9, variant not shown         Suspected internal deletion, this clone was ignored    
BC007217 Kidney, renal cell adenocarcinoma Gene BRD9, variant not shown       available from MGC, AAA This clone was ignored    
BF003121 Prostate Gene BRD9, variant not shown       AAA This clone was ignored    
BE899435 adenocarcinoma cell line, ovary Gene BRD9, variant not shown         This clone was ignored    
BE898949 adenocarcinoma cell line, ovary Gene BRD9, variant not shown         This clone was ignored    
BG248960 hypernephroma, cell line, Kidney Gene BRD9, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l, .m, .n, .o, .p, .q-u, .r, .s, .t-u, .u-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C