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Gene BNIP3LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
397 supporting clones for gene BNIP3L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF370457 ovarian carcinoma .a-u 1 to 4717 1 to 4718 exact tiling clone, AAA   4718/4718
(100 %)
3 diff
(100.0 %id)
AK315870 brain .b 1 to 915 1 to 915 exact tiling clone,   915/915
(100 %)
0 diff
(100 %id)
CD519121 White Matter .c 1 to 702 1 to 704   tiling clone,   704/892
(78 %)
11 diff
(98.8 %id)
CD558918 White Matter .c 1 to 819 1 to 830       830/870
(95 %)
21 diff
(97.6 %id)
TI_44169380   .c 110 to 765 93 to 762       666/762
(87 %)
30 diff
(96.1 %id)
NM_004331.2   .c 110 to 3614 1 to 3505 exact RefSeq,   3505/3505
(100 %)
5 diff
(99.9 %id)
AL132665 Kidney .c 136 to 3601 1 to 3461 E122* tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 3461/3461
(100 %)
18 diff
(99.5 %id)
DB456491 testis .c 136 to 642 1 to 507       507/507
(100 %)
1 diff
(99.9 %id)
DB460924 testis .c 136 to 523 1 to 388       388/388
(100 %)
1 diff
(99.8 %id)
DC377972 brain .c 136 to 589 1 to 454       454/454
(100 %)
0 diff
(100 %id)
AF452712   .c 137 to 1472 1 to 1336 exact AAA   1336/1336
(100 %)
1 diff
(100.0 %id)
FN109243 breast carcinoma .c 137 to 210 1 to 74       74/74
(100 %)
1 diff
(98.7 %id)
TI_44348550   .c 137 to 677 152 to 713       563/806
(69 %)
34 diff
(95.8 %id)
TI_44348565   .c 137 to 733 98 to 704       605/712
(84 %)
29 diff
(96.0 %id)
DA117305 cerebellum .c 138 to 683 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BY795398 eye .c 138 to 907 1 to 770 exact     770/770
(100 %)
0 diff
(100 %id)
DC317616 amygdala .c 140 to 582 1 to 443       443/443
(100 %)
1 diff
(99.8 %id)
DC321181 brain .c 140 to 596 1 to 457       457/457
(100 %)
0 diff
(100 %id)
DC321354 brain .c 140 to 593 1 to 454       454/454
(100 %)
1 diff
(99.8 %id)
TI_1540413094   .c 142 to 555 413 to 2       412/446
(92 %)
8 diff
(98.3 %id)
DC320865 brain .c 143 to 573 1 to 431       431/432
(99 %)
5 diff
(98.9 %id)
DA297657 hippocampus .c 143 to 716 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB453536 testis .c 143 to 654 1 to 512       512/512
(100 %)
4 diff
(99.3 %id)
BE243991 leukopheresis .c 143 to 360 1 to 218       218/218
(100 %)
4 diff
(98.2 %id)
DC422563 uterus .c 143 to 570 1 to 428       428/428
(100 %)
2 diff
(99.6 %id)
DA388156 thalamus .c 144 to 742 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA391654 thalamus .c 144 to 725 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
TI_1540412998   .c 144 to 550 409 to 3       407/445
(91 %)
3 diff
(99.4 %id)
TI_1540413022   .c 144 to 539 398 to 3       396/607
(65 %)
2 diff
(99.7 %id)
TI_1540413046   .c 144 to 550 409 to 3       407/444
(91 %)
3 diff
(99.4 %id)
DC317608 amygdala .c 145 to 608 1 to 464       464/464
(100 %)
1 diff
(99.8 %id)
DA247153 brain .c 145 to 731 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA353263 substantia nigra .c 145 to 694 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB482571 hippocampus .c 145 to 653 1 to 506       506/506
(100 %)
2 diff
(99.7 %id)
CX783574 human embryonic stem cells .c 145 to 885 1 to 741       741/741
(100 %)
0 diff
(100 %id)
DC369238   .c 145 to 587 1 to 443       443/452
(98 %)
2 diff
(99.6 %id)
TI_57177163   .c 149 to 937 63 to 851 K177N G178R I180Y S182L A183R ...     789/852
(92 %)
10 diff
(98.9 %id)
AF067396   .c 152 to 1472 1 to 1321 exact AAA   1321/1321
(100 %)
4 diff
(99.7 %id)
AF079221   .c 152 to 1394 1 to 1242 exact AAA   1242/1292
(96 %)
9 diff
(99.4 %id)
FN132828 breast carcinoma .c 152 to 221 1 to 70       70/70
(100 %)
2 diff
(97.2 %id)
BQ639034 eye, retina .c 152 to 663 1 to 512       512/512
(100 %)
0 diff
(100 %id)
TI_57221313   .c 153 to 1037 64 to 954 D101N F106L D107M V108W E109K ...     891/1087
(81 %)
50 diff
(95.5 %id)
CX756127 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 155 to 904 1 to 750 exact   Submitted on the opposite strand 750/752
(99 %)
1 diff
(99.9 %id)
AF060922 brain .c 156 to 1392 1 to 1238 S215F A216C S217Q T218H Y219L     1238/1239
(99 %)
5 diff
(99.6 %id)
DB454607 testis .c 156 to 632 1 to 477       477/477
(100 %)
3 diff
(99.4 %id)
CV573850 cornea, eye .c 156 to 246 1 to 91       91/91
(100 %)
0 diff
(100 %id)
DC342173 thalamus .c 157 to 608 1 to 453       453/453
(100 %)
2 diff
(99.6 %id)
BU661147 blood .c 157 to 684 1 to 528       528/528
(100 %)
0 diff
(100 %id)
TI_44349814   .c 157 to 923 123 to 888 K171N S172K G173W A174S M175H ...     766/888
(86 %)
19 diff
(97.9 %id)
DA025861   .c 158 to 736 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA122065 cerebellum .c 160 to 699 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB479401 hippocampus .c 163 to 630 1 to 468       468/468
(100 %)
1 diff
(99.8 %id)
DA318494 hippocampus .c 164 to 720 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA410697 thalamus .c 164 to 777 2 to 615   capped   614/614
(100 %)
0 diff
(100 %id)
TI_44172222   .c 164 to 903 120 to 859 N68H P96H L199*     740/859
(86 %)
12 diff
(98.7 %id)
TI_1540413070   .c 164 to 549 390 to 5       386/417
(92 %)
6 diff
(98.6 %id)
BX471458   .c 165 to 479 1 to 315       315/315
(100 %)
0 diff
(100 %id)
DB463916 hippocampus .c 166 to 573 1 to 408       408/408
(100 %)
2 diff
(99.6 %id)
DB483374 hippocampus .c 166 to 623 1 to 458       458/458
(100 %)
2 diff
(99.6 %id)
DB481480 hippocampus .c 171 to 649 1 to 479       479/479
(100 %)
1 diff
(99.8 %id)
DB482103 hippocampus .c 171 to 652 1 to 482       482/482
(100 %)
2 diff
(99.6 %id)
DB495648 hypothalamus .c 171 to 672 1 to 502       502/505
(99 %)
3 diff
(99.5 %id)
DB502451 hypothalamus .c 171 to 642 1 to 472       472/472
(100 %)
1 diff
(99.8 %id)
TI_45215161   .c 171 to 756 89 to 677       589/677
(87 %)
10 diff
(98.6 %id)
DA248534 brain .c 172 to 757 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA393141 thalamus .c 172 to 757 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
AF536326   .c 174 to 1691 1 to 1513 D107E AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 1513/1513
(100 %)
9 diff
(99.5 %id)
BX423655 brain, fetal brain .c 178 to 1171 1 to 986 N45H     986/1018
(96 %)
18 diff
(98.3 %id)
BE693649 breast .c 179 to 446 260 to 1       260/262
(99 %)
10 diff
(96.2 %id)
TI_44342667   .c 183 to 995 77 to 891 S25Y     815/894
(91 %)
10 diff
(98.9 %id)
BX403585 placenta .c 185 to 1232 1 to 1043 S82X     1043/1062
(98 %)
15 diff
(98.6 %id)
CN300094 embryonic stem cells, DMSO-treated H9 cellline .c 185 to 792 1 to 608       608/608
(100 %)
0 diff
(100 %id)
CR624662 Placenta Cot 25-normalized .c 188 to 1439 1 to 1252 exact     1252/1252
(100 %)
0 diff
(100 %id)
AB004788 placenta .c 189 to 1453 1 to 1265 exact tiling clone,   1265/1265
(100 %)
0 diff
(100 %id)
CR607895 fetal liver .c 189 to 1452 1 to 1264 exact     1264/1264
(100 %)
0 diff
(100 %id)
BX359030 Placenta Cot 25-normalized .c 189 to 1209 1 to 1016 exact     1016/1020
(99 %)
16 diff
(98.5 %id)
BI093245 cervix .c 191 to 933 1 to 743 exact     743/743
(100 %)
0 diff
(100 %id)
TI_154160061   .c 193 to 751 84 to 642       559/560
(99 %)
6 diff
(99.0 %id)
AK290213 thalamus .c 194 to 1091 1 to 898 exact     898/898
(100 %)
2 diff
(99.8 %id)
DA192722 amygdala .c 194 to 794 2 to 602   capped   601/601
(100 %)
0 diff
(100 %id)
CR624736 Neuroblastoma Cot 25-normalized .c 198 to 1440 1 to 1243 exact     1243/1243
(100 %)
0 diff
(100 %id)
AW957681   .c 200 to 842 1 to 643       643/644
(99 %)
1 diff
(99.9 %id)
BM724916 eye, fetal eye .c 200 to 876 1 to 674   fully sequenced,   674/674
(100 %)
2 diff
(99.8 %id)
BU657044 blood .c 201 to 825 1 to 625       625/625
(100 %)
0 diff
(100 %id)
ES307993 beard hair, skin .c 208 to 346 45 to 183       139/183
(75 %)
6 diff
(96.8 %id)
BC001559 Cervix, carcinoma .c 210 to 1394 1 to 1185 exact available from MGC, AAA Possibly primed on the genome, locally A rich (23/26 A in genome downstream of last aligned base) 1185/1185
(100 %)
1 diff
(100.0 %id)
CN300097 embryonic stem cells, DMSO-treated H9 cellline .c 211 to 761 1 to 551       551/551
(100 %)
0 diff
(100 %id)
BT019500   .c 234 to 891 1 to 658       658/660
(99 %)
1 diff
(99.9 %id)
BT019501   .c 234 to 891 1 to 658       658/660
(99 %)
1 diff
(99.9 %id)
CN300099 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 234 to 912 1 to 679 exact     679/679
(100 %)
0 diff
(100 %id)
CN300107 embryonic stem cells, DMSO-treated H9 cellline .c 234 to 605 1 to 372       372/372
(100 %)
0 diff
(100 %id)
CR456701   .c 234 to 889 1 to 656       656/660
(99 %)
1 diff
(99.9 %id)
CV024903 mixed .c 234 to 886 1 to 654       654/655
(99 %)
2 diff
(99.7 %id)
TI_1948100326   .c 234 to 621 139 to 526   fully sequenced,   388/417
(93 %)
5 diff
(98.9 %id)
TI_1948100476   .c 234 to 621 131 to 518   fully sequenced,   388/416
(93 %)
6 diff
(98.6 %id)
TI_1948100651   .c 234 to 673 123 to 562       440/469
(93 %)
6 diff
(98.8 %id)
TI_1948100814   .c 235 to 621 126 to 512   fully sequenced,   387/416
(93 %)
6 diff
(98.6 %id)
BX954403   .c 250 to 744 1 to 495       495/495
(100 %)
0 diff
(100 %id)
CU454621 epidermis .c 259 to 911 1 to 653       653/653
(100 %)
9 diff
(98.7 %id)
BU664578 blood .c 267 to 636 1 to 370       370/370
(100 %)
0 diff
(100 %id)
BU664569 blood .c 268 to 792 1 to 525       525/525
(100 %)
0 diff
(100 %id)
AW374306 colon .c 273 to 876 605 to 4       602/605
(99 %)
3 diff
(99.6 %id)
CD679246 eye, Trabecular meshwork .c 276 to 826 1 to 551       551/551
(100 %)
0 diff
(100 %id)
AW374317 colon .c 278 to 887 623 to 13       611/623
(98 %)
2 diff
(99.7 %id)
CN300092 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 290 to 474 1 to 185       185/185
(100 %)
0 diff
(100 %id)
AW176445 colon .c 306 to 705 399 to 1       399/399
(100 %)
8 diff
(98.0 %id)
TI_44168930   .c 340 to 1002 62 to 726       665/726
(91 %)
17 diff
(97.7 %id)
TI_44169182   .c 340 to 911 86 to 657       572/657
(87 %)
6 diff
(99.1 %id)
BX507095 Liver .c 375 to 1116 1 to 742       742/742
(100 %)
4 diff
(99.5 %id)
CN300105 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 381 to 1117 1 to 737       737/737
(100 %)
1 diff
(99.9 %id)
BU655963 blood .c 394 to 866 1 to 473       473/473
(100 %)
0 diff
(100 %id)
TI_57189994   .c 411 to 1173 58 to 820       763/763
(100 %)
1 diff
(99.9 %id)
AW176444 colon .c 430 to 887 467 to 10       458/467
(98 %)
4 diff
(99.2 %id)
BQ581289 insulinoma, Pancreas .c 458 to 986 1 to 529       529/529
(100 %)
5 diff
(99.1 %id)
CK902074 insulinoma, Pancreas .c 458 to 1045 1 to 588       588/588
(100 %)
5 diff
(99.2 %id)
BU664096 blood .c 491 to 1084 1 to 594       594/594
(100 %)
0 diff
(100 %id)
BM766848 Ascites, stomach .c 532 to 1029 1 to 498       498/498
(100 %)
0 diff
(100 %id)
N34735 melanocyte .c 545 to 854 1 to 310       310/310
(100 %)
0 diff
(100 %id)
BE816886 breast_normal .c 549 to 1183 636 to 3       634/637
(99 %)
3 diff
(99.6 %id)
TI_1948100327   .c 560 to 892 461 to 129   fully sequenced,   333/361
(92 %)
0 diff
(100 %id)
TI_1948100477   .c 560 to 892 460 to 128   fully sequenced,   333/460
(72 %)
0 diff
(100 %id)
TI_1948100815   .c 560 to 892 476 to 144   fully sequenced,   333/476
(69 %)
0 diff
(100 %id)
AA460512   .c 606 to 1067 1 to 462   fully sequenced,   462/462
(100 %)
1 diff
(99.8 %id)
TI_154090888   .c 615 to 1410 875 to 90   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 786/870
(90 %)
16 diff
(98.2 %id)
CA425822 cell lines, Chondrosarcoma .c 630 to 1412 783 to 1       783/783
(100 %)
3 diff
(99.7 %id)
TI_154126168   .c 640 to 1472 898 to 83   AAA   820/915
(89 %)
31 diff
(96.7 %id)
TI_154131840   .c 692 to 1466 867 to 98       770/1040
(74 %)
17 diff
(98.4 %id)
AA837401 germinal center B cell .c 694 to 1461 758 to 2       757/910
(83 %)
32 diff
(96.5 %id)
TI_154052126   .c 695 to 1469 857 to 88       770/1021
(75 %)
12 diff
(98.9 %id)
CA434213 lung, Metastatic Chondrosarcoma .c 731 to 1412 680 to 1       680/680
(100 %)
2 diff
(99.8 %id)
AA330456   .c 760 to 1112 1 to 353       353/353
(100 %)
0 diff
(100 %id)
BQ549438 insulinoma, Pancreas .c 765 to 1422 654 to 1       654/654
(100 %)
10 diff
(98.5 %id)
BJ993692.
matches multiple genes
hepatoblastoma .c 773 to 1186 1 to 414     also hits gene C1orf151andNBL1 414/414
(100 %)
0 diff
(100 %id)
TI_149283991   .c 776 to 1472 781 to 86   AAA   696/697
(99 %)
3 diff
(99.6 %id)
CA421171 Bone, Enchondroma cell line .c 791 to 1472 700 to 19   AAA   682/682
(100 %)
0 diff
(100 %id)
BM680150 eye, fetal eye .c 814 to 1472 677 to 19   fully sequenced, AAA   659/659
(100 %)
0 diff
(100 %id)
CD368881 Alveolar Macrophage, lung .c 837 to 1400 576 to 13   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 564/564
(100 %)
0 diff
(100 %id)
BU736737 eye, Retina Foveal and Macular .c 842 to 1400 571 to 13   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 559/559
(100 %)
0 diff
(100 %id)
GD156088   .c 846 to 984 139 to 1     Submitted on the opposite strand 139/165
(84 %)
2 diff
(98.8 %id)
TI_149308638   .c 866 to 1400 616 to 83   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 534/1008
(52 %)
1 diff
(100.0 %id)
AW992196 breast_normal .c 881 to 1179 338 to 37     Submitted on the opposite strand 302/338
(89 %)
0 diff
(100 %id)
FN127539 breast carcinoma .c 898 to 976 1 to 79       79/83
(95 %)
1 diff
(98.8 %id)
DA154779 amygdala .c 900 to 1425 2 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
FN096656 breast carcinoma .c 901 to 955 55 to 1     Submitted on the opposite strand 55/66
(83 %)
0 diff
(100 %id)
BU184622 leiomyosarcoma, uterus .c 902 to 1802 1 to 911       911/911
(100 %)
15 diff
(98.4 %id)
AI754662 bone marrow stroma .c 903 to 1405 520 to 19   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 502/502
(100 %)
1 diff
(99.9 %id)
BE439400 Trabecular meshwork .c 912 to 1450 570 to 33   AAA   538/538
(100 %)
2 diff
(99.7 %id)
AI720353 colon .c 915 to 1387 473 to 1       473/473
(100 %)
0 diff
(100 %id)
AI829453 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 916 to 1394 489 to 11   AAA Possibly primed on the genome, locally A rich (23/26 A in genome downstream of last aligned base) 479/479
(100 %)
0 diff
(100 %id)
AI126040   .c 921 to 1397 477 to 1       477/477
(100 %)
0 diff
(100 %id)
DB519003 testis .c 933 to 1410 1 to 478     Submitted on the opposite strand 478/478
(100 %)
0 diff
(100 %id)
AA812318 epithelium (cell line), Prostate .c 946 to 1409 464 to 1       464/464
(100 %)
0 diff
(100 %id)
AA777085 heart .c 960 to 1397 438 to 1       438/438
(100 %)
0 diff
(100 %id)
FN108267 breast carcinoma .c 964 to 1044 87 to 8     Submitted on the opposite strand 80/88
(90 %)
0 diff
(100 %id)
AI032998 liver and spleen .c 970 to 1394 425 to 1       425/425
(100 %)
0 diff
(100 %id)
DB566708 hypothalamus .c 991 to 1450 1 to 460     Submitted on the opposite strand 460/460
(100 %)
0 diff
(100 %id)
AI223849 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 994 to 1402 409 to 1       409/409
(100 %)
0 diff
(100 %id)
DB521905 testis .c 997 to 1472 1 to 476     Submitted on the opposite strand 476/476
(100 %)
0 diff
(100 %id)
DB573669 hypothalamus .c 998 to 1450 1 to 453     Submitted on the opposite strand 453/453
(100 %)
0 diff
(100 %id)
FN171233 breast carcinoma .c 1014 to 1139 126 to 1     Submitted on the opposite strand 126/126
(100 %)
0 diff
(100 %id)
DA712176   .c 1015 to 1568 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
AA459869   .c 1037 to 1413 377 to 1   fully sequenced,   377/377
(100 %)
0 diff
(100 %id)
CN394674 embryonic stem cells, DMSO-treated H9 cellline .c 1041 to 1465 1 to 426       426/426
(100 %)
3 diff
(99.3 %id)
D60502   .c 1043 to 1420 378 to 1     Submitted on the opposite strand 378/381
(99 %)
5 diff
(98.7 %id)
DB526322 testis .c 1046 to 1472 1 to 427     Submitted on the opposite strand 427/427
(100 %)
0 diff
(100 %id)
N46987 multiple sclerosis lesions .c 1046 to 1472 427 to 1       427/427
(100 %)
0 diff
(100 %id)
DA753199   .c 1049 to 1617 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
AW168180 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 1053 to 1467 415 to 1       415/415
(100 %)
0 diff
(100 %id)
AI074631 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1063 to 1402 340 to 1       340/340
(100 %)
0 diff
(100 %id)
FN163780 breast carcinoma .c 1075 to 1158 85 to 1     Submitted on the opposite strand 85/86
(98 %)
1 diff
(98.9 %id)
FN159623 breast carcinoma .c 1101 to 1208 1 to 111       111/111
(100 %)
3 diff
(97.3 %id)
FN165748 breast carcinoma .c 1102 to 1207 110 to 2     Submitted on the opposite strand 109/111
(98 %)
0 diff
(100 %id)
AI373903 Kidney .c 1104 to 1401 298 to 1       298/298
(100 %)
0 diff
(100 %id)
AI242878 liver and spleen .c 1106 to 1400 295 to 1       295/295
(100 %)
0 diff
(100 %id)
AW194165 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 1115 to 1472 358 to 1       358/358
(100 %)
0 diff
(100 %id)
AA479406 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1121 to 1395 1 to 275   fully sequenced,   275/275
(100 %)
0 diff
(100 %id)
AI469631 colon, moderately-differentiated adenocarcinoma .c 1128 to 1402 275 to 1       275/275
(100 %)
0 diff
(100 %id)
FN072879 breast carcinoma .c 1134 to 1207 72 to 1     Submitted on the opposite strand 72/73
(98 %)
2 diff
(97.3 %id)
DA157644 amygdala .c 1147 to 1718 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
AA988969 carcinoid, lung .c 1158 to 1471 314 to 1       314/314
(100 %)
0 diff
(100 %id)
DW422296 Liver .c 1219 to 1447 17 to 245   AAA   229/245
(93 %)
6 diff
(97.6 %id)
DW422297 Liver .c 1219 to 1447 17 to 245   AAA   229/245
(93 %)
7 diff
(97.2 %id)
DW431744 Liver .c 1219 to 1447 17 to 245   AAA   229/245
(93 %)
6 diff
(97.6 %id)
DA162025 amygdala .c 1242 to 1828 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
D79952 aorta .c 1252 to 1472 1 to 221       221/221
(100 %)
0 diff
(100 %id)
CD678260 eye, Trabecular meshwork .c 1266 to 1405 1 to 140   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 140/140
(100 %)
0 diff
(100 %id)
AA479305 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1266 to 1396 131 to 1   fully sequenced,   131/131
(100 %)
0 diff
(100 %id)
F07700 brain, total brain .c 1301 to 1642 1 to 342       342/342
(100 %)
0 diff
(100 %id)
FN156438 breast carcinoma .c 1316 to 1394 1 to 78       78/78
(100 %)
1 diff
(98.8 %id)
FN074652 breast carcinoma .c 1332 to 1403 1 to 70       70/71
(98 %)
2 diff
(97.2 %id)
AA418334 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1347 to 1400 74 to 21   AAA Submitted on the opposite strand 54/54
(100 %)
0 diff
(100 %id)
CF135607 lymph .c 1383 to 1996 14 to 628   tiling clone,   615/628
(97 %)
6 diff
(99.1 %id)
TI_154164058   .c 1383 to 2203 83 to 892       810/906
(89 %)
26 diff
(97.2 %id)
BP423099 small intestine .c 1405 to 1907 1 to 503     Submitted on the opposite strand 503/503
(100 %)
0 diff
(100 %id)
AA342187 Spleen .c 1416 to 1617 1 to 202       202/202
(100 %)
0 diff
(100 %id)
AW956507   .c 1422 to 1907 1 to 486       486/486
(100 %)
0 diff
(100 %id)
AA405157.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1426 to 1778 1 to 353     also hits gene IFRD1andC7orf53 353/353
(100 %)
0 diff
(100 %id)
DA129298 alzheimer cortex .c 1476 to 1963 2 to 489   capped   488/488
(100 %)
0 diff
(100 %id)
DA548338   .c 1604 to 2068 2 to 466   capped   465/465
(100 %)
0 diff
(100 %id)
BQ694632 adipose .c 1646 to 2243 1 to 598   tiling clone,   598/598
(100 %)
0 diff
(100 %id)
BM147472 leukopheresis .c 1651 to 2140 1 to 491       491/491
(100 %)
3 diff
(99.4 %id)
BM149312 leukopheresis .c 1651 to 2160 1 to 511       511/511
(100 %)
3 diff
(99.5 %id)
BM693064 eye, Retina Foveal and Macular .c 1655 to 2181 1 to 527     Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 527/527
(100 %)
3 diff
(99.5 %id)
BX423654 brain, fetal brain .c 2504 to 3564 1058 to 8   tiling clone,   1051/1064
(98 %)
0 diff
(100 %id)
BX453860 placenta .c 2690 to 3600 928 to 1       928/943
(98 %)
39 diff
(95.9 %id)
BU730190 eye, Retina Foveal and Macular .c 2920 to 3609 708 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 690/698
(98 %)
0 diff
(100 %id)
Z40756 brain, total brain .c 3322 to 3601 280 to 1       280/280
(100 %)
0 diff
(100 %id)
CN394675 embryonic stem cells, DMSO-treated H9 cellline .d 1 to 558 1 to 558   tiling clone,   558/558
(100 %)
0 diff
(100 %id)
BI462283 testis .d 13 to 593 1 to 583       859/1035
(82 %)
44 diff
(95.8 %id)
BQ429548 testis .d 26 to 593 1 to 570   tiling clone,   838/843
(99 %)
33 diff
(96.1 %id)
BM722325 eye, fetal eye .e 1 to 726 1 to 726 exact tiling clone,   726/726
(100 %)
1 diff
(99.9 %id)
BU656373 blood .e 90 to 222 1 to 133       133/133
(100 %)
0 diff
(100 %id)
FN086859 breast carcinoma .e 92 to 157 65 to 1     Submitted on the opposite strand 65/74
(87 %)
1 diff
(98.7 %id)
AA934942 metastatic prostate bone lesion .e 110 to 184 78 to 4       75/79
(94 %)
0 diff
(100 %id)
FN120593 breast carcinoma .e 111 to 202 93 to 1     Submitted on the opposite strand 93/93
(100 %)
3 diff
(96.8 %id)
D54550   .e 120 to 442 1 to 323       323/323
(100 %)
0 diff
(100 %id)
FN086971 breast carcinoma .e 138 to 218 90 to 12     Submitted on the opposite strand 79/90
(87 %)
2 diff
(97.8 %id)
BU664562 blood .e 158 to 392 1 to 235       235/235
(100 %)
0 diff
(100 %id)
FN078490 breast carcinoma .e 158 to 247 1 to 90       90/90
(100 %)
0 diff
(100 %id)
FN171255 breast carcinoma .e 174 to 263 90 to 1     Submitted on the opposite strand 90/90
(100 %)
0 diff
(100 %id)
AA382068   .e 195 to 345 1 to 151       151/151
(100 %)
0 diff
(100 %id)
BU656087 blood .e 217 to 426 1 to 210       210/210
(100 %)
0 diff
(100 %id)
FN140736 breast carcinoma .e 327 to 439 1 to 116       116/116
(100 %)
7 diff
(94.0 %id)
AW374296 colon .e 407 to 549 182 to 41       142/182
(78 %)
3 diff
(98.4 %id)
BU660211 blood .f 1 to 483 1 to 483   tiling clone,   483/483
(100 %)
7 diff
(98.6 %id)
BU665366 blood .f 29 to 706 15 to 692       678/692
(97 %)
8 diff
(98.9 %id)
BU657515 blood .f 30 to 640 1 to 611       611/611
(100 %)
6 diff
(99.1 %id)
AK316315   .f 33 to 1356 1 to 1323 exact tiling clone,   1323/1323
(100 %)
1 diff
(100.0 %id)
DA904118   .f 34 to 601 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BU665137 blood .f 35 to 751 1 to 717 exact     717/717
(100 %)
2 diff
(99.8 %id)
BU663690 blood .f 36 to 693 13 to 670       658/670
(98 %)
7 diff
(99.0 %id)
BP289533 lung .f 39 to 533 1 to 493       493/579
(85 %)
10 diff
(98.3 %id)
BU659810 blood .f 46 to 519 11 to 484       474/484
(97 %)
6 diff
(98.8 %id)
BU661337 blood .f 46 to 702 11 to 667       657/667
(98 %)
6 diff
(99.2 %id)
BU662344 blood .f 46 to 693 24 to 672       649/672
(96 %)
7 diff
(99.0 %id)
BU655790 blood .f 56 to 608 9 to 561       553/561
(98 %)
6 diff
(99.0 %id)
BU656846 blood .f 56 to 462 12 to 417       406/417
(97 %)
6 diff
(98.6 %id)
BU656893 blood .f 56 to 542 13 to 499       487/499
(97 %)
6 diff
(98.8 %id)
BU657116 blood .f 56 to 460 11 to 415       405/415
(97 %)
6 diff
(98.6 %id)
BU657457 blood .f 56 to 526 1 to 471       471/471
(100 %)
1 diff
(99.8 %id)
BU659949 blood .f 56 to 768 10 to 722 exact     713/722
(98 %)
7 diff
(99.1 %id)
BU661308 blood .f 56 to 702 12 to 658       647/658
(98 %)
6 diff
(99.1 %id)
BU661517 blood .f 56 to 651 12 to 606       595/606
(98 %)
8 diff
(98.7 %id)
BU661590 blood .f 56 to 719 12 to 674       663/674
(98 %)
6 diff
(99.2 %id)
BU663500 blood .f 56 to 666 12 to 620       609/620
(98 %)
6 diff
(99.1 %id)
BU664451 blood .f 56 to 718 19 to 680       662/680
(97 %)
6 diff
(99.2 %id)
BU664646 blood .f 56 to 727 10 to 680 exact     671/680
(98 %)
6 diff
(99.2 %id)
BU657774 blood .f 59 to 618 1 to 560       560/560
(100 %)
2 diff
(99.7 %id)
H59144 liver and spleen .f 59 to 359 1 to 302       302/302
(100 %)
1 diff
(99.7 %id)
BU656785 blood .f 60 to 483 1 to 424       424/424
(100 %)
5 diff
(98.9 %id)
BX470330 Liver .f 61 to 586 1 to 526       526/526
(100 %)
5 diff
(99.1 %id)
BU656937 blood .f 62 to 603 12 to 553       542/553
(98 %)
7 diff
(98.8 %id)
BU660746 blood .f 62 to 437 11 to 386       376/386
(97 %)
6 diff
(98.5 %id)
BU661024 blood .f 62 to 560 1 to 499       499/499
(100 %)
3 diff
(99.4 %id)
BU663237 blood .f 62 to 587 12 to 536       525/544
(96 %)
7 diff
(98.8 %id)
BU656657 blood .f 65 to 407 12 to 354       343/354
(96 %)
6 diff
(98.4 %id)
CD522389 pooled .f 65 to 754 1 to 697 L161F L163A G164R I165H Y166L ...     697/721
(96 %)
13 diff
(98.2 %id)
BU656041 blood .f 67 to 583 1 to 517       517/517
(100 %)
1 diff
(99.9 %id)
BU656696 blood .f 67 to 586 12 to 531       520/531
(97 %)
6 diff
(98.9 %id)
BU656883 blood .f 67 to 485 1 to 419       419/419
(100 %)
1 diff
(99.8 %id)
BU658722 blood .f 67 to 519 12 to 464       453/464
(97 %)
7 diff
(98.5 %id)
BU659466 blood .f 67 to 511 11 to 455       445/455
(97 %)
6 diff
(98.7 %id)
BU663244 blood .f 67 to 663 12 to 605       594/605
(98 %)
6 diff
(99.1 %id)
BU663714 blood .f 67 to 756 24 to 712 exact     689/712
(96 %)
6 diff
(99.2 %id)
BU665211 blood .f 67 to 659 12 to 603       592/603
(98 %)
7 diff
(98.9 %id)
CR598147 Placenta Cot 25-normalized .f 69 to 1288 1 to 1220 exact tiling clone,   1220/1220
(100 %)
0 diff
(100 %id)
AL546426 placenta, Placenta Cot 25-normalized .f 69 to 448 1 to 380   fully sequenced,   380/380
(100 %)
0 diff
(100 %id)
BU664933 blood .f 71 to 659 1 to 588       588/588
(100 %)
3 diff
(99.5 %id)
BU656592 blood .f 79 to 566 12 to 499       488/499
(97 %)
6 diff
(98.8 %id)
H93649 liver and spleen .f 84 to 415 1 to 335       335/335
(100 %)
4 diff
(98.9 %id)
W01672 liver and spleen .f 85 to 555 1 to 474       474/474
(100 %)
3 diff
(99.4 %id)
BU665151 blood .f 90 to 560 1 to 471       471/471
(100 %)
2 diff
(99.6 %id)
BU663611 blood .f 92 to 719 1 to 628       628/628
(100 %)
0 diff
(100 %id)
BU665308 blood .f 92 to 720 1 to 626 E83V V85E E86G G87E E88K ...     626/626
(100 %)
4 diff
(99.4 %id)
BU662278 blood .f 93 to 759 19 to 683 exact     665/683
(97 %)
6 diff
(99.2 %id)
BU656600 blood .f 97 to 554 1 to 458       458/458
(100 %)
7 diff
(98.5 %id)
BU665427 blood .f 101 to 747 1 to 644 E83V V85E E86G G87E E88K ...     644/644
(100 %)
3 diff
(99.6 %id)
H62431 liver and spleen .f 104 to 460 1 to 360       360/360
(100 %)
4 diff
(98.9 %id)
N77648 liver and spleen .f 104 to 469 1 to 379       379/462
(82 %)
16 diff
(96.6 %id)
BU656601 blood .f 149 to 560 1 to 412       412/412
(100 %)
3 diff
(99.3 %id)
AL546561 placenta, Placenta Cot 25-normalized .f 387 to 1288 902 to 4   fully sequenced,   899/902
(99 %)
4 diff
(99.6 %id)
N58277 liver and spleen .f 798 to 1222 431 to 1       431/450
(95 %)
10 diff
(97.8 %id)
H61430 liver and spleen .f 891 to 1218 331 to 1       331/331
(100 %)
6 diff
(98.2 %id)
H93650 liver and spleen .f 908 to 1294 389 to 1       389/389
(100 %)
2 diff
(99.5 %id)
H59105 liver and spleen .f 941 to 1305 373 to 6       368/373
(98 %)
8 diff
(97.9 %id)
N71645 liver and spleen .f 990 to 1222 233 to 1       233/240
(97 %)
0 diff
(100 %id)
AK307195   .g 1 to 921 2 to 922 exact tiling clone,   922/922
(100 %)
1 diff
(99.9 %id)
DC349044   .g 1 to 561 2 to 562 exact     562/562
(100 %)
1 diff
(99.9 %id)
DB082862 testis .h 1 to 552 2 to 553   tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
DB089572 testis .h 99 to 666 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
BG899730 cartilage .h 389 to 701 84 to 396   tiling clone,   313/326
(96 %)
6 diff
(98.2 %id)
BG899757 cartilage .h 389 to 698 82 to 391   tiling clone,   310/325
(95 %)
4 diff
(98.8 %id)
CD522140 pooled .h 700 to 774 1 to 75   tiling clone,   400/1178
(33 %)
10 diff
(99.2 %id)
FN084393 breast carcinoma .i-u 1 to 67 75 to -7     Submitted on the opposite strand 75/75
(100 %)
1 diff
(98.7 %id)
DA160470 amygdala .i-u 1 to 568 2 to 569   tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
DN914855   .i-u 10 to 585 575 to 1       575/586
(98 %)
0 diff
(100 %id)
DB505959 hypothalamus .i-u 62 to 564 1 to 503       503/503
(100 %)
0 diff
(100 %id)
AI625651 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .i-u 80 to 498 5 to 423     Submitted on the opposite strand 419/423
(99 %)
6 diff
(98.6 %id)
N88204   .i-u 154 to 361 1 to 208       208/208
(100 %)
0 diff
(100 %id)
FN053821 breast carcinoma .i-u 165 to 263 1 to 95       95/96
(98 %)
5 diff
(94.8 %id)
BE092544 breast .i-u 189 to 584 396 to 1     Submitted on the opposite strand 396/396
(100 %)
11 diff
(97.3 %id)
FN048564 breast carcinoma .i-u 295 to 391 1 to 99       99/99
(100 %)
2 diff
(98.0 %id)
TI_57191088   .i-u 333 to 1113 55 to 835       781/781
(100 %)
11 diff
(98.6 %id)
CR606234 Placenta Cot 25-normalized .i-u 372 to 1870 1 to 1499 exact     1499/1499
(100 %)
0 diff
(100 %id)
CR617632 Neuroblastoma Cot 10-normalized .i-u 377 to 1905 1 to 1529 exact tiling clone,   1529/1529
(100 %)
0 diff
(100 %id)
CR623582 neuroblastoma .i-u 377 to 1885 1 to 1509 exact     1509/1509
(100 %)
0 diff
(100 %id)
AL552464 placenta, Placenta Cot 25-normalized .i-u 381 to 1133 7 to 759   fully sequenced,   753/759
(99 %)
6 diff
(99.3 %id)
FN050067 breast carcinoma .i-u 519 to 583 65 to 1     Submitted on the opposite strand 65/65
(100 %)
0 diff
(100 %id)
TI_57235904   .i-u 525 to 1318 27 to 821       795/824
(96 %)
8 diff
(99.1 %id)
AA282778 germinal center B cell .i-u 641 to 980 1 to 340       340/340
(100 %)
1 diff
(99.8 %id)
FN149074 breast carcinoma .i-u 645 to 753 109 to 1     Submitted on the opposite strand 109/109
(100 %)
1 diff
(99.1 %id)
BM697293 eye, lens .i-u 700 to 1328 1 to 629       629/629
(100 %)
1 diff
(99.9 %id)
AW886996 ovary .i-u 707 to 1425 719 to 5       715/720
(99 %)
0 diff
(100 %id)
FN074095 breast carcinoma .i-u 853 to 932 76 to 1     Submitted on the opposite strand 76/77
(98 %)
4 diff
(94.9 %id)
BE718857 head_neck .i-u 885 to 1393 512 to 6       507/512
(99 %)
0 diff
(100 %id)
AL516725 brain, neuroblastoma, neuroblastoma cells .i-u 900 to 1875 978 to 11 S37X K38X A40G C43W T49X ...     968/1070
(90 %)
0 diff
(100 %id)
BQ640049 eye, retina .i-u 920 to 1418 1 to 499       499/499
(100 %)
0 diff
(100 %id)
W31767 parathyroid gland, parathyroid tumor .i-u 1038 to 1473 1 to 437       437/438
(99 %)
2 diff
(99.6 %id)
AA039823 uterus .i-u 1061 to 1559 1 to 499   fully sequenced,   499/499
(100 %)
2 diff
(99.6 %id)
BQ374532 testis_normal .i-u 1080 to 1377 297 to 2       296/299
(98 %)
0 diff
(100 %id)
TI_154039151   .i-u 1081 to 1935 938 to 94 exact AAA   845/951
(88 %)
21 diff
(97.8 %id)
FN083161 breast carcinoma .i-u 1099 to 1203 98 to 1     Submitted on the opposite strand 98/98
(100 %)
8 diff
(91.9 %id)
FN083647 breast carcinoma .i-u 1101 to 1170 1 to 70       70/71
(98 %)
1 diff
(98.6 %id)
AL575761 placenta, Placenta Cot 25-normalized .i-u 1103 to 1870 766 to 1 F20X N26B fully sequenced,   766/766
(100 %)
0 diff
(100 %id)
TI_149272309   .i-u 1116 to 1931 922 to 116 S61F M64N R65E I66N E67*     807/1114
(72 %)
0 diff
(100 %id)
TI_149288092   .i-u 1137 to 1927 869 to 85 exact AAA   785/986
(79 %)
14 diff
(98.6 %id)
TI_149292004   .i-u 1176 to 1934 823 to 79 exact AAA   745/792
(94 %)
21 diff
(97.4 %id)
FN158686 breast carcinoma .i-u 1196 to 1293 1 to 98       98/98
(100 %)
0 diff
(100 %id)
TI_149302084   .i-u 1212 to 1935 804 to 89 exact AAA   716/797
(89 %)
38 diff
(95.3 %id)
TI_149304047   .i-u 1222 to 1927 785 to 81 exact AAA   705/705
(100 %)
2 diff
(99.8 %id)
CA445077 lung, Metastatic Chondrosarcoma .i-u 1225 to 1935 729 to 19 exact AAA   711/711
(100 %)
1 diff
(99.9 %id)
BQ575517 Chondrosarcoma Grade II, Left Pelvis .i-u 1225 to 1927 720 to 19 exact AAA   702/702
(100 %)
1 diff
(99.9 %id)
BM970165 lung .i-u 1240 to 1927 704 to 17 exact AAA   688/688
(100 %)
1 diff
(99.9 %id)
BQ576032 Chondrosarcoma Grade II, Left Pelvis .i-u 1241 to 1927 705 to 19 exact AAA   687/687
(100 %)
0 diff
(100 %id)
CB851112 lung, Primary Lung Cystic Fibrosis EpithelialCells .i-u 1244 to 1927 700 to 17 exact AAA   684/684
(100 %)
0 diff
(100 %id)
CB154298 Liver .i-u 1248 to 1930 683 to 1 exact   Submitted on the opposite strand 683/683
(100 %)
0 diff
(100 %id)
BU682359 lung .i-u 1249 to 1934 698 to 19 exact AAA   680/680
(100 %)
8 diff
(98.9 %id)
TI_159714785   .i-u 1251 to 1927 764 to 87 exact AAA   678/976
(69 %)
6 diff
(99.4 %id)
CB306845 Human Lung Epithelial cells, lung .i-u 1261 to 1927 683 to 17 exact AAA   667/679
(98 %)
0 diff
(100 %id)
CB243519 Human Lung Epithelial cells, lung .i-u 1261 to 1927 683 to 17 exact AAA   667/676
(98 %)
0 diff
(100 %id)
BG938584 Bone, Hip .i-u 1278 to 1923 651 to 6 exact     646/651
(99 %)
0 diff
(100 %id)
TI_154134367   .i-u 1282 to 1934 758 to 102 exact     657/870
(75 %)
0 diff
(100 %id)
BQ020421 Fibrosarcoma .i-u 1294 to 1927 649 to 17 exact AAA   633/633
(100 %)
1 diff
(99.9 %id)
BQ003519 Chondrosarcoma, Left Pelvis .i-u 1306 to 1927 638 to 17 exact AAA   622/622
(100 %)
0 diff
(100 %id)
BY994977   .i-u 1308 to 1932 677 to 53 exact AAA Submitted on the opposite strand 625/625
(100 %)
0 diff
(100 %id)
CB157351 Liver .i-u 1344 to 1930 587 to 1 exact   Submitted on the opposite strand 587/587
(100 %)
0 diff
(100 %id)
BM353579 Pancreas, Purified pancreatic islet .i-u 1345 to 1934 590 to 1 exact     590/590
(100 %)
0 diff
(100 %id)
AI741851 pooled .i-u 1348 to 1927 593 to 14 exact AAA   580/580
(100 %)
0 diff
(100 %id)
T48379 fetal spleen, Spleen .i-u 1349 to 1586 1 to 245   fully sequenced,   245/245
(100 %)
0 diff
(100 %id)
AA041469 uterus .i-u 1352 to 1582 234 to 1   fully sequenced,   234/234
(100 %)
0 diff
(100 %id)
AA364945 pineal body .i-u 1355 to 1632 1 to 278       278/278
(100 %)
0 diff
(100 %id)
BI497224 cochlea, ear .i-u 1360 to 1935 1 to 576 exact AAA   576/576
(100 %)
5 diff
(99.2 %id)
BM993047 lung, Metastatic Chondrosarcoma .i-u 1375 to 1934 578 to 19 exact AAA   560/560
(100 %)
0 diff
(100 %id)
AI435937 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .i-u 1378 to 1925 548 to 1 exact     548/548
(100 %)
0 diff
(100 %id)
AW024831 Kidney .i-u 1379 to 1927 549 to 1 exact     549/549
(100 %)
0 diff
(100 %id)
BF064273 pooled .i-u 1385 to 1927 553 to 11 exact AAA   543/543
(100 %)
0 diff
(100 %id)
BI495802 cochlea, ear .i-u 1407 to 1927 8 to 528 exact AAA   521/528
(98 %)
6 diff
(98.9 %id)
AI697197 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .i-u 1408 to 1927 520 to 1 exact     520/520
(100 %)
0 diff
(100 %id)
BF740144 brain, glioblastoma (pooled) .i-u 1409 to 1936 531 to 1 K36Q K38Q T39X A40C Q41T ...     531/531
(100 %)
5 diff
(99.1 %id)
DB550966 hippocampus .i-u 1414 to 1927 1 to 514 exact   Submitted on the opposite strand 514/514
(100 %)
0 diff
(100 %id)
W24294 lung .i-u 1416 to 1672 1 to 257       257/257
(100 %)
0 diff
(100 %id)
BM667936 eye, lens .i-u 1420 to 1927 524 to 17 exact AAA   508/508
(100 %)
0 diff
(100 %id)
BG255146 adenocarcinoma, cell line, Prostate .i-u 1423 to 1927 1 to 505 exact AAA   505/505
(100 %)
0 diff
(100 %id)
CA435978 lung, Metastatic Chondrosarcoma .i-u 1423 to 1934 530 to 19 exact AAA   512/512
(100 %)
0 diff
(100 %id)
DB551432 hippocampus .i-u 1441 to 1935 1 to 495 exact   Submitted on the opposite strand 495/495
(100 %)
0 diff
(100 %id)
BF435465 sciatic nerve .i-u 1441 to 1927 487 to 1 exact     487/487
(100 %)
0 diff
(100 %id)
DB577263 hypothalamus .i-u 1444 to 1925 1 to 482 exact   Submitted on the opposite strand 482/482
(100 %)
1 diff
(99.8 %id)
FN050115 breast carcinoma .i-u 1448 to 1571 124 to 1     Submitted on the opposite strand 124/124
(100 %)
0 diff
(100 %id)
AA927745 pooled germ cell tumors .i-u 1450 to 1928 479 to 1 exact     479/479
(100 %)
0 diff
(100 %id)
CA393821 eye, RPE/choroid .i-u 1451 to 1927 509 to 33 exact AAA Submitted on the opposite strand 477/477
(100 %)
0 diff
(100 %id)
DB548101 hippocampus .i-u 1454 to 1927 1 to 474 exact   Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
DB550300 hippocampus .i-u 1467 to 1927 1 to 461 exact   Submitted on the opposite strand 461/461
(100 %)
0 diff
(100 %id)
BM148477 leukopheresis .i-u 1469 to 1932 479 to 16 exact     464/489
(94 %)
0 diff
(100 %id)
DB523984 testis .i-u 1481 to 1932 1 to 452 exact   Submitted on the opposite strand 452/452
(100 %)
0 diff
(100 %id)
DB529998 hippocampus .i-u 1486 to 1927 1 to 442 exact   Submitted on the opposite strand 442/442
(100 %)
0 diff
(100 %id)
DB520022 testis .i-u 1495 to 1927 1 to 433 exact   Submitted on the opposite strand 433/433
(100 %)
0 diff
(100 %id)
BM980344 lung, Primary Lung Cystic Fibrosis EpithelialCells .i-u 1507 to 1935 447 to 19 exact AAA   429/429
(100 %)
0 diff
(100 %id)
AA594791 breast .i-u 1514 to 1935 422 to 1 exact     422/422
(100 %)
0 diff
(100 %id)
AW473977 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .i-u 1517 to 1935 419 to 1 exact     419/419
(100 %)
0 diff
(100 %id)
BJ993689.
matches multiple genes
hepatoblastoma .i-u 1521 to 1897 377 to 1 exact   also hits gene C1orf151andNBL1 377/377
(100 %)
0 diff
(100 %id)
AW273268 serous papillary carcinoma, high grade, 2pooled tumors, uterus .i-u 1521 to 1928 408 to 1 exact     408/408
(100 %)
0 diff
(100 %id)
AA999674 breast .i-u 1536 to 1932 397 to 1 exact     397/397
(100 %)
0 diff
(100 %id)
AA283080 germinal center B cell .i-u 1543 to 1906 364 to 1 exact     364/364
(100 %)
0 diff
(100 %id)
AA936682 Kidney .i-u 1544 to 1934 413 to 23 exact AAA   391/391
(100 %)
0 diff
(100 %id)
BG942896 blood .i-u 1545 to 1936 422 to 31 exact tiling clone, AAA   392/392
(100 %)
0 diff
(100 %id)
T48380 fetal spleen, Spleen .i-u 1556 to 1906 354 to 1   fully sequenced,   354/354
(100 %)
0 diff
(100 %id)
AA903285 leiomyosarcoma, soft tissue .i-u 1565 to 1927 375 to 13   AAA   363/363
(100 %)
0 diff
(100 %id)
DB552289 hippocampus .i-u 1584 to 1927 1 to 344     Submitted on the opposite strand 344/344
(100 %)
0 diff
(100 %id)
AA999659 breast .i-u 1590 to 1932 343 to 1       343/343
(100 %)
0 diff
(100 %id)
AI701253 adenocarcinoma, Pancreas .i-u 1607 to 1932 340 to 15   AAA   326/326
(100 %)
0 diff
(100 %id)
BE243722 leukopheresis .i-u 1641 to 1925 285 to 1       285/285
(100 %)
3 diff
(99.0 %id)
AI000708 Kidney .i-u 1653 to 1929 277 to 1       277/277
(100 %)
0 diff
(100 %id)
AA865929 pooled germ cell tumors .i-u 1656 to 1927 272 to 1       272/272
(100 %)
0 diff
(100 %id)
T31370 colon, embryo .i-u 1657 to 1930 1 to 274       274/274
(100 %)
0 diff
(100 %id)
W04684 parathyroid gland, parathyroid tumor .i-u 1659 to 1935 277 to 1       277/277
(100 %)
0 diff
(100 %id)
AA975781 2 pooled tumors (clear cell type), Kidney .i-u 1731 to 1934 225 to 22   AAA   204/204
(100 %)
0 diff
(100 %id)
BG938590 Bone, Hip .i-u 1733 to 1923 196 to 6       191/196
(97 %)
0 diff
(100 %id)
BF724933 eye, Iris .j-u 1 to 484 1 to 484   tiling clone, Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 484/484
(100 %)
0 diff
(100 %id)
H67772 liver and spleen .j-u 362 to 833 1 to 488   tiling clone,   488/488
(100 %)
21 diff
(95.7 %id)
BG436449 placenta .j-u 447 to 1224 1 to 774 A8G H15S S16F W17M Y18V ... tiling clone,   774/775
(99 %)
35 diff
(95.5 %id)
BE844181 testis_normal .j-u 661 to 1068 1 to 407       407/412
(98 %)
13 diff
(96.9 %id)
BF724932 eye, Iris .j-u 676 to 1278 619 to 17 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 603/603
(100 %)
1 diff
(99.9 %id)
AL600556   .j-u 676 to 1178 1 to 502       502/502
(100 %)
6 diff
(98.9 %id)
H67773 liver and spleen .j-u 937 to 1265 334 to 1 D34X     334/336
(99 %)
5 diff
(98.6 %id)
BM876601 insulinoma, Pancreas .k-u 1 to 543 1 to 543   tiling clone,   543/543
(100 %)
3 diff
(99.5 %id)
DB575422.
matches multiple genes
hypothalamus .k-u 5 to 467 463 to 1     also hits gene PNMA2 463/467
(99 %)
1 diff
(99.8 %id)
DB565510.
matches multiple genes
hypothalamus .k-u 17 to 473 457 to 1     also hits gene PNMA2 457/458
(99 %)
1 diff
(99.8 %id)
DB558464.
matches multiple genes
hypothalamus .k-u 24 to 481 462 to 1     also hits gene PNMA2 462/462
(100 %)
4 diff
(99.2 %id)
AW902728 nervous_normal .k-u 302 to 451 14 to 161       148/161
(91 %)
6 diff
(96.3 %id)
BE701937 nervous_normal .k-u 350 to 581 1 to 232       232/232
(100 %)
3 diff
(98.8 %id)
BE699087 nervous_normal .k-u 362 to 634 12 to 289   tiling clone,   278/289
(96 %)
6 diff
(98.0 %id)
BM876339 insulinoma, Pancreas .k-u 574 to 1101 528 to 1 exact tiling clone,   528/528
(100 %)
0 diff
(100 %id)
BX477138   .l 1 to 502 1 to 502 K19E tiling clone,   502/502
(100 %)
2 diff
(99.7 %id)
BE567753 bladder, carcinoma, cell line .l 15 to 659 1 to 641 K9N G10R I12Y S14L A15R ... tiling clone,   641/642
(99 %)
11 diff
(98.3 %id)
AK300286 placenta Gene BNIP3L, variant not shown         Suspected internal deletion, this clone was ignored    
AK300727 skeletal muscle Gene BNIP3L, variant not shown         Suspected internal deletion, this clone was ignored    
AA113054 Pancreas Gene BNIP3L, variant not shown         This clone was ignored    
AA113136 Pancreas Gene BNIP3L, variant not shown         This clone was ignored    
AA084916   Gene BNIP3L, variant not shown         This clone was ignored    
AA084938   Gene BNIP3L, variant not shown         This clone was ignored    
DC381439 placenta Gene BNIP3L, variant not shown         Suspected internal deletion, this clone was ignored    
DC385944 skeletal muscle Gene BNIP3L, variant not shown         Suspected internal deletion, this clone was ignored    
BM150107 leukopheresis Gene BNIP3L, variant not shown              
TI_1540412974   Gene BNIP3L, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a-u, .b, .c, .d, .e, .f, .g, .h, .i-u, .j-u, .k-u, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI