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Gene BMP5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
139 supporting clones for gene BMP5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA755950   .a 1 to 577 2 to 575   tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
DA851827 placenta .a 31 to 495 2 to 466   capped   465/465
(100 %)
0 diff
(100 %id)
DA217423 brain .a 33 to 575 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA588419 lung .a 33 to 609 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA710203   .a 33 to 571 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DA846223 placenta .a 33 to 603 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA851988 placenta .a 33 to 571 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA862670 placenta .a 33 to 594 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA864122 placenta .a 33 to 620 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DB224984 trachea .a 33 to 612 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
AK291559 placenta .a 35 to 2199 1 to 2165 V245L     2165/2165
(100 %)
2 diff
(100.0 %id)
DW463853 Liver .a 35 to 127 18 to 110       93/110
(84 %)
6 diff
(94.6 %id)
AU139316 placenta .a 35 to 817 2 to 789   capped   788/795
(99 %)
9 diff
(98.9 %id)
DA536557 heart .a 36 to 609 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA564738 heart .a 36 to 594 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA851987 placenta .a 36 to 573 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA860147 placenta .a 36 to 604 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA862124 placenta .a 36 to 615 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DB217106 trachea .a 36 to 604 2 to 570   capped   569/570
(99 %)
1 diff
(99.9 %id)
AL540742 placenta .a 47 to 1090 1 to 1031       1031/1058
(97 %)
22 diff
(98.0 %id)
TI_57183595   .a 47 to 711 36 to 702       667/799
(83 %)
10 diff
(98.8 %id)
BC027958 Lung, Spleen, fetal, pooled .a 48 to 2215 1 to 2168 exact tiling clone, available from MGC, AAA   2168/2168
(100 %)
0 diff
(100 %id)
NM_021073.2   .a 48 to 2215 1 to 2168 exact RefSeq, AAA   2168/2168
(100 %)
0 diff
(100 %id)
AL543086 placenta, Placenta Cot 25-normalized .a 49 to 983 1 to 928       928/977
(94 %)
14 diff
(98.6 %id)
AL550385 placenta, Placenta Cot 25-normalized .a 49 to 1129 1 to 1073       1073/1077
(99 %)
13 diff
(98.8 %id)
BQ218167 epithelioid carcinoma, Pancreas .a 49 to 914 1 to 873       873/873
(100 %)
8 diff
(99.1 %id)
DA917070 small intestine .a 49 to 606 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
AA096171   .a 53 to 418 1 to 356       356/362
(98 %)
15 diff
(95.9 %id)
AA249296   .a 56 to 427 1 to 372       372/372
(100 %)
1 diff
(99.8 %id)
M60314   .a 61 to 2209 1 to 2148 exact     2148/2153
(99 %)
5 diff
(99.8 %id)
AU100077   .a 66 to 365 1 to 300       300/300
(100 %)
0 diff
(100 %id)
AU107172   .a 66 to 115 1 to 50       50/50
(100 %)
0 diff
(100 %id)
BP292075 lung .a 66 to 649 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DA562931 heart .a 67 to 599 2 to 531   capped   530/534
(99 %)
7 diff
(98.7 %id)
DA592660 lung .a 67 to 638 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA859856 placenta .a 67 to 629 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB223589 trachea .a 67 to 635 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BM921913 pooled brain, lung, testis .a 81 to 987 16 to 936       921/1029
(89 %)
25 diff
(97.6 %id)
DA541063 lung .a 109 to 689 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
BX501173 Liver .a 118 to 860 1 to 744       744/745
(99 %)
8 diff
(99.0 %id)
DR006124 Prostate .a 142 to 367 1 to 226       226/226
(100 %)
1 diff
(99.6 %id)
CN432106 embryonic stem cells, cell lines H1, H7, andH9 .a 273 to 600 1 to 328       328/328
(100 %)
0 diff
(100 %id)
BU156767 leiomyosarcoma, uterus .a 310 to 1199 1 to 891       891/893
(99 %)
11 diff
(98.8 %id)
CA391773 eye, RPE/choroid .a 473 to 1076 1 to 605       605/605
(100 %)
2 diff
(99.7 %id)
BQ946325 leiomyosarcoma, uterus .a 716 to 1443 12 to 739       728/824
(88 %)
11 diff
(98.7 %id)
BI767146 pooled lung and spleen .a 729 to 799 689 to 760       738/763
(96 %)
15 diff
(98.1 %id)
DB137938 thymus .a 747 to 1283 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
DB158287 thymus .a 747 to 1335 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
CV029514 mixed .a 760 to 1416 1 to 652       652/652
(100 %)
6 diff
(99.1 %id)
TI_1948129556   .a 760 to 1249 130 to 619       490/1016
(48 %)
1 diff
(100.0 %id)
TI_1948129557   .a 760 to 1598 133 to 974   AAA   842/1222
(68 %)
22 diff
(98.2 %id)
TI_1948129901   .a 760 to 1446 127 to 810       684/1011
(67 %)
16 diff
(98.5 %id)
TI_1948129902   .a 760 to 1588 132 to 965       834/1225
(68 %)
18 diff
(98.6 %id)
TI_1948130249   .a 760 to 1249 132 to 623       492/1049
(46 %)
3 diff
(99.8 %id)
TI_1948130250   .a 760 to 1562 129 to 941       813/1258
(64 %)
22 diff
(98.3 %id)
TI_1948130593   .a 760 to 1347 126 to 715       590/1044
(56 %)
24 diff
(97.8 %id)
TI_1948130594   .a 760 to 1445 132 to 818       687/1215
(56 %)
16 diff
(98.7 %id)
BF371416 prostate_normal .a 886 to 1340 1 to 459       459/459
(100 %)
16 diff
(96.6 %id)
AL601116   .a 905 to 1658 1 to 755       755/759
(99 %)
4 diff
(99.5 %id)
CN432109 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 962 to 1625 1 to 665       665/665
(100 %)
1 diff
(99.9 %id)
BQ304930 breast .a 971 to 1554 1 to 584       584/584
(100 %)
10 diff
(98.3 %id)
BQ306726 breast .a 975 to 1591 639 to 31       609/645
(94 %)
12 diff
(98.2 %id)
BQ306858 breast .a 976 to 1442 19 to 483       465/483
(96 %)
8 diff
(98.4 %id)
BQ308711 breast .a 976 to 1592 29 to 644       616/648
(95 %)
8 diff
(98.8 %id)
BQ304834 breast .a 985 to 1502 8 to 524       517/527
(98 %)
29 diff
(94.5 %id)
BQ304921 breast .a 987 to 1587 650 to 52       599/650
(92 %)
12 diff
(98.2 %id)
BQ304815 breast .a 992 to 1591 600 to 5       596/600
(99 %)
14 diff
(97.7 %id)
BQ305177 breast .a 994 to 1587 594 to 3       592/596
(99 %)
18 diff
(97.0 %id)
BE906200 epithelioid carcinoma, Pancreas .a 996 to 1752 1 to 758       758/822
(92 %)
21 diff
(97.5 %id)
BQ304827 breast .a 1004 to 1583 1 to 583       583/583
(100 %)
16 diff
(97.3 %id)
BQ305145 breast .a 1065 to 1591 545 to 17       529/548
(96 %)
5 diff
(99.1 %id)
AW583889 Islets of Langerhans, Pancreas .a 1091 to 1675 1 to 583   fully sequenced,   583/583
(100 %)
14 diff
(97.6 %id)
CK905008 Islets of Langerhans, Pancreas .a 1091 to 1674 1 to 584       584/584
(100 %)
0 diff
(100 %id)
CN432108 embryonic stem cells, cell lines H1, H7, andH9 .a 1132 to 1429 1 to 298       298/298
(100 %)
4 diff
(98.7 %id)
BI966131 Islets of Langerhans, Pancreas .a 1147 to 1317 1 to 171       171/171
(100 %)
0 diff
(100 %id)
AA089769   .a 1153 to 1361 1 to 205       205/205
(100 %)
6 diff
(97.1 %id)
AA092893   .a 1175 to 1532 1 to 354       354/354
(100 %)
12 diff
(96.7 %id)
AL569760 placenta, Placenta Cot 25-normalized .a 1248 to 2188 939 to 1       939/939
(100 %)
3 diff
(99.7 %id)
TI_1948129903   .a 1283 to 2123 978 to 123       856/1267
(67 %)
21 diff
(98.4 %id)
TI_1948129558   .a 1311 to 2121 955 to 129       827/1252
(66 %)
32 diff
(97.5 %id)
BQ305178 breast .a 1335 to 1590 1 to 254       254/254
(100 %)
5 diff
(98.1 %id)
DR763714 embryonic stem .a 1418 to 2281 1 to 864       864/864
(100 %)
2 diff
(99.8 %id)
BM473320 leiomyosarcoma, uterus .a 1424 to 2125 3 to 708       706/1287
(54 %)
10 diff
(99.3 %id)
TI_1948130251   .a 1440 to 2123 745 to 63       683/1359
(50 %)
7 diff
(99.5 %id)
TI_1948130595   .a 1440 to 2123 802 to 114       689/1328
(51 %)
13 diff
(99.1 %id)
CN432107 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1529 to 2009 1 to 481       481/481
(100 %)
3 diff
(99.4 %id)
AI023897 liver and spleen .a 1616 to 2199 582 to 1       582/582
(100 %)
8 diff
(98.7 %id)
AA779457   .a 1630 to 2219 594 to 5       590/594
(99 %)
6 diff
(99.0 %id)
AW262797 brain, three pooled meningiomas .a 1639 to 2197 573 to 16   AAA   558/604
(92 %)
22 diff
(96.4 %id)
AW583514 Islets of Langerhans, Pancreas .a 1645 to 2202 563 to 5   fully sequenced,   559/563
(99 %)
31 diff
(94.5 %id)
CR605366 Placenta Cot 25-normalized .a 1647 to 2203 1 to 557       557/557
(100 %)
0 diff
(100 %id)
BX378135 Placenta Cot 25-normalized .a 1647 to 2203 1 to 557       557/557
(100 %)
0 diff
(100 %id)
N85106   .a 1666 to 2020 1 to 349       349/353
(98 %)
12 diff
(96.7 %id)
AI247671 liver and spleen .a 1673 to 2199 525 to 1       525/569
(92 %)
5 diff
(99.2 %id)
AI801831 Prostate .a 1692 to 2198 507 to 3       505/507
(99 %)
4 diff
(99.3 %id)
DB379580 placenta .a 1716 to 2199 483 to 1       483/548
(88 %)
16 diff
(97.1 %id)
AA993864   .a 1728 to 2201 476 to 1       476/476
(100 %)
20 diff
(95.8 %id)
AI239557 pooled .a 1785 to 2200 414 to 1       414/414
(100 %)
2 diff
(99.6 %id)
BG199684   .a 1787 to 2187 1 to 401       401/403
(99 %)
1 diff
(99.8 %id)
T28240 colon, embryo .a 1853 to 2011 30 to 188       167/188
(88 %)
6 diff
(96.9 %id)
BX483417   .a 1859 to 2344 1 to 486       486/486
(100 %)
0 diff
(100 %id)
AA092208   .a 1893 to 2077 1 to 185       185/185
(100 %)
2 diff
(99.0 %id)
AL568576 placenta .a 1894 to 2865 974 to 4       971/984
(98 %)
9 diff
(99.1 %id)
BF574785 muscle (skeletal) .a 1947 to 2676 1 to 723       723/849
(85 %)
31 diff
(96.4 %id)
H04451 placenta .a 1959 to 2025 1 to 67   fully sequenced,   67/67
(100 %)
1 diff
(98.6 %id)
H01951 placenta .a 1995 to 2180 192 to 7   fully sequenced,   186/192
(96 %)
0 diff
(100 %id)
AW316957 brain, three pooled meningiomas .a 2186 to 2561 376 to 1   tiling clone,   376/376
(100 %)
0 diff
(100 %id)
BM312108 Pancreas, Purified pancreatic islet .a 2350 to 2902 1 to 553   tiling clone,   553/553
(100 %)
5 diff
(99.1 %id)
BE930944 placenta_normal .a 2382 to 2790 410 to 1       410/416
(98 %)
10 diff
(97.6 %id)
BX481112   .a 2435 to 2901 523 to 57   AAA Submitted on the opposite strand 467/467
(100 %)
2 diff
(99.6 %id)
AL574259 placenta, Placenta Cot 25-normalized .a 2644 to 3775 1111 to 1   tiling clone,   1111/1126
(98 %)
45 diff
(96.1 %id)
R80045 placenta .a 2959 to 3340 1 to 395       395/395
(100 %)
17 diff
(95.7 %id)
CD677200 eye, Trabecular meshwork .a 3077 to 3592 1 to 516       516/516
(100 %)
0 diff
(100 %id)
BX095543 placenta .a 3182 to 3813 1 to 630   AAA   630/630
(100 %)
4 diff
(99.4 %id)
R23328 placenta .a 3221 to 3544 1 to 343   fully sequenced,   343/343
(100 %)
11 diff
(96.8 %id)
BE501543 Kidney .a 3273 to 3813 541 to 1   tiling clone,   541/541
(100 %)
0 diff
(100 %id)
AW305378 brain, three pooled meningiomas .a 3290 to 3820 531 to 3       529/531
(99 %)
0 diff
(100 %id)
BM992429 Bone, Subchondral Bone .a 3298 to 3820 539 to 19   AAA   521/521
(100 %)
1 diff
(99.9 %id)
DV459788 cochlea, ear .a 3346 to 3635 5 to 294       290/294
(98 %)
6 diff
(98.0 %id)
DV460238 cochlea, ear .a 3353 to 3678 1 to 326       326/326
(100 %)
1 diff
(99.7 %id)
N93830.
matches multiple genes
lung .a 3393 to 3813 427 to 1     also hits gene PSMD6 427/427
(100 %)
9 diff
(97.9 %id)
BQ015417 placenta .a 3408 to 3999 609 to 22       588/609
(96 %)
0 diff
(100 %id)
AW275116 pooled .a 3409 to 3902 494 to 1       494/494
(100 %)
0 diff
(100 %id)
R79952 placenta .a 3451 to 3802 361 to 1       361/364
(99 %)
12 diff
(96.8 %id)
TI_157595753   .a 3504 to 4002 604 to 100   tiling clone, AAA   505/505
(100 %)
10 diff
(98.1 %id)
R23252 placenta .a 3514 to 3812 305 to 1   fully sequenced,   305/305
(100 %)
8 diff
(97.4 %id)
AI189717 placenta .a 3573 to 4002 437 to 12   AAA   426/426
(100 %)
2 diff
(99.6 %id)
AI983718 brain, three pooled meningiomas .a 3581 to 4004 423 to 4       420/423
(99 %)
0 diff
(100 %id)
AI160907 placenta .a 3583 to 4002 416 to 1       416/416
(100 %)
2 diff
(99.6 %id)
AI186286 placenta .a 3583 to 4002 416 to 1       416/416
(100 %)
2 diff
(99.6 %id)
AW089167 brain, tumor, 5 pooled (see description) .a 3659 to 3813 155 to 1       155/155
(100 %)
0 diff
(100 %id)
BQ025899 placenta .a 3661 to 4002 353 to 16   AAA   338/338
(100 %)
3 diff
(99.2 %id)
AW089164 brain, tumor, 5 pooled (see description) .a 3685 to 3813 129 to 1       129/129
(100 %)
0 diff
(100 %id)
N22285 cochlea, ear .a 3715 to 4012 297 to 4   tiling clone,   294/297
(98 %)
0 diff
(100 %id)
BP425982 small intestine .a 3769 to 4012 1 to 240   tiling clone, Submitted on the opposite strand 240/240
(100 %)
10 diff
(95.9 %id)
AK303576 thymus .b 1 to 1874 1 to 1874 exact tiling clone,   1874/1874
(100 %)
1 diff
(100.0 %id)
BQ959679 leiomyosarcoma, uterus .b 1374 to 2284 1 to 912       912/919
(99 %)
9 diff
(99.1 %id)
DA833638 placenta .b 1808 to 2515 2 to 709   tiling clone, fully sequenced, capped   708/708
(100 %)
5 diff
(99.3 %id)
AI004250   .b 1816 to 2261 446 to 1       446/446
(100 %)
0 diff
(100 %id)
AW890069 nervous_tumor .b 1997 to 2236 1 to 246       246/254
(96 %)
11 diff
(95.7 %id)
DB380484 placenta .b 2485 to 2957 471 to 1   tiling clone, fully sequenced,   471/471
(100 %)
0 diff
(100 %id)
BI044083 ovary .c-u 1 to 373 379 to 4 V15G L16A L17F Y18C Y19I ... tiling clone,   376/394
(95 %)
0 diff
(100 %id)
TI_57148510   .d-u 1 to 646 57 to 723 N17K D18R H20D H21T A22M ... tiling clone,   667/723
(92 %)
6 diff
(99.2 %id)
BI761816 pooled colon, kidney, stomach .d-u 3 to 646 1 to 665 N17K D18R H20D H21T A22M ... tiling clone,   665/665
(100 %)
35 diff
(94.8 %id)
BG927299 cartilage .d-u 582 to 1201 87 to 706   tiling clone,   620/636
(97 %)
6 diff
(99.1 %id)
CA396850 eye, RPE/choroid Gene BMP5, variant not shown         This clone was ignored    
AL691780   Gene BMP5, variant not shown         This clone was ignored    
AL691781   Gene BMP5, variant not shown       AAA This clone was ignored    
AU144899 whole embryo, mainly head Gene BMP5, variant not shown         Suspected internal deletion, this clone was ignored    
AU118306 whole embryo, mainly head Gene BMP5, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI