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Gene BMP4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
222 supporting clones for gene BMP4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_130851.2   BMP4.a 1 to 1784 1 to 1784 exact RefSeq, AAA   1784/1784
(100 %)
0 diff
(100 %id)
BM473160 duodenal adenocarcinoma, cell line, small intestine BMP4.b 1 to 990 1 to 999   tiling clone,   999/1003
(99 %)
27 diff
(97.4 %id)
CX782203 human embryonic stem cells BMP4.b 989 to 1843 1 to 855   tiling clone,   855/855
(100 %)
2 diff
(99.8 %id)
CX782138 human embryonic stem cells BMP4.b 2536 to 2698 189 to 26   tiling clone, AAA   164/167
(98 %)
1 diff
(99.5 %id)
BQ083000 stomach BMP4.c 1 to 516 1 to 518   tiling clone,   518/518
(100 %)
2 diff
(99.7 %id)
BG822426 adenocarcinoma cell line, colon BMP4.c 26 to 732 1 to 719       719/722
(99 %)
22 diff
(97.0 %id)
NM_001202.3   BMP4.c 27 to 1965 1 to 1939 exact RefSeq, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 1939/1939
(100 %)
0 diff
(100 %id)
BE617281 adenocarcinoma, colon BMP4.c 44 to 821 1 to 778       778/907
(85 %)
29 diff
(96.9 %id)
BG823588 adenocarcinoma cell line, colon BMP4.c 49 to 862 1 to 821       821/926
(88 %)
22 diff
(97.7 %id)
BG821108 adenocarcinoma cell line, colon BMP4.c 51 to 789 1 to 769       769/944
(81 %)
56 diff
(94.1 %id)
M22490   BMP4.c 52 to 1802 1 to 1751 exact tiling clone,   1751/1751
(100 %)
0 diff
(100 %id)
BG328313 adenocarcinoma cell line, colon BMP4.c 53 to 801 1 to 752       752/1068
(70 %)
12 diff
(98.9 %id)
BG248254 adenocarcinoma cell line, colon BMP4.c 63 to 814 1 to 748       748/957
(78 %)
23 diff
(97.6 %id)
CN409804 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells BMP4.c 64 to 743 1 to 681       681/681
(100 %)
2 diff
(99.8 %id)
F08602 brain, total brain BMP4.c 66 to 327 1 to 261       261/261
(100 %)
2 diff
(99.3 %id)
BF982469 duodenal adenocarcinoma, cell line, small intestine BMP4.c 66 to 815 1 to 754       754/1168
(64 %)
28 diff
(97.7 %id)
CN409798 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells BMP4.c 67 to 542 1 to 476       476/476
(100 %)
0 diff
(100 %id)
BM801759 duodenal adenocarcinoma, cell line, small intestine BMP4.c 69 to 977 36 to 952       917/953
(96 %)
23 diff
(97.6 %id)
BE740078 adenocarcinoma cell line, ovary BMP4.c 71 to 811 1 to 740       740/741
(99 %)
10 diff
(98.7 %id)
CV812217 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass BMP4.c 71 to 814 1 to 745       745/893
(83 %)
9 diff
(99.0 %id)
CN409800 embryonic stem cells, DMSO-treated H9 cellline BMP4.c 72 to 722 1 to 653       653/653
(100 %)
2 diff
(99.7 %id)
BE869477 adenocarcinoma, colon BMP4.c 84 to 819 1 to 736       736/1047
(70 %)
23 diff
(97.9 %id)
DR005149 Prostate BMP4.c 94 to 782 1 to 689       689/689
(100 %)
4 diff
(99.5 %id)
BE512742 adenocarcinoma cell line, colon BMP4.c 96 to 899 1 to 801       801/801
(100 %)
19 diff
(97.7 %id)
CN409807 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells BMP4.c 107 to 722 1 to 616       616/616
(100 %)
0 diff
(100 %id)
CN409802 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 BMP4.c 116 to 709 1 to 594       594/594
(100 %)
0 diff
(100 %id)
BM802079 duodenal adenocarcinoma, cell line, small intestine BMP4.c 117 to 759 1 to 653       653/864
(75 %)
12 diff
(98.7 %id)
CN409810 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells BMP4.c 119 to 793 1 to 675       675/675
(100 %)
2 diff
(99.8 %id)
CN409805 embryonic stem cells, DMSO-treated H9 cellline BMP4.c 132 to 722 1 to 591       591/592
(99 %)
1 diff
(99.9 %id)
BM791751 stomach BMP4.c 142 to 726 1 to 585       585/585
(100 %)
0 diff
(100 %id)
AA584413 colon, colon tumor RER+ BMP4.c 147 to 763 1 to 612     Submitted on the opposite strand 612/612
(100 %)
10 diff
(98.4 %id)
BM854286 stomach BMP4.c 204 to 635 1 to 432       432/432
(100 %)
0 diff
(100 %id)
BE962323 adenocarcinoma, colon BMP4.c 1077 to 1818 750 to 1       750/761
(98 %)
28 diff
(96.4 %id)
F04809 brain, total brain BMP4.c 1747 to 1928 183 to 1   tiling clone,   183/183
(100 %)
3 diff
(98.4 %id)
BX353241 Neuroblastoma Cot 25-normalized BMP4.d 1 to 1003 1 to 991   tiling clone,   991/1040
(95 %)
19 diff
(98.2 %id)
BX388362 Neuroblastoma Cot 25-normalized BMP4.d 1 to 988 1 to 981       981/981
(100 %)
22 diff
(97.8 %id)
BX161385 neuroblastoma BMP4.d 5 to 1709 1 to 1705 exact tiling clone,   1705/1705
(100 %)
0 diff
(100 %id)
DB454561 testis BMP4.d 18 to 478 1 to 461       461/461
(100 %)
0 diff
(100 %id)
CD389742 embryonic trophoblasts, made from WA01 stemcells BMP4.d 39 to 906 23 to 893       871/894
(97 %)
15 diff
(98.4 %id)
NM_130850.2   BMP4.e 1 to 1730 1 to 1730 exact RefSeq, AAA   1730/1730
(100 %)
0 diff
(100 %id)
BX378331 Placenta Cot 25-normalized BMP4.e 16 to 933 1 to 906   tiling clone,   906/922
(98 %)
20 diff
(97.9 %id)
BX161438 placenta BMP4.e 19 to 1710 1 to 1692 exact tiling clone,   1692/1692
(100 %)
0 diff
(100 %id)
CR603423 Placenta Cot 25-normalized BMP4.e 20 to 1087 1 to 1068       1068/1068
(100 %)
0 diff
(100 %id)
BX335960 Placenta Cot 25-normalized BMP4.e 20 to 1051 1 to 1009       1009/1009
(100 %)
33 diff
(96.8 %id)
BX364857 Placenta Cot 25-normalized BMP4.e 20 to 1082 1 to 1043       1043/1047
(99 %)
30 diff
(97.2 %id)
BC020546 Duodenum, adenocarcinoma BMP4.e 26 to 1567 17 to 1558 V152A available from MGC, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 1542/1542
(100 %)
1 diff
(100.0 %id)
BF984535 duodenal adenocarcinoma, cell line, small intestine BMP4.e 26 to 674 27 to 673       647/673
(96 %)
9 diff
(98.7 %id)
CB157722 Liver BMP4.e 26 to 380 1 to 355       355/355
(100 %)
3 diff
(99.2 %id)
BQ647660 hepatocellular carcinoma, cell line, Liver BMP4.e 27 to 579 71 to 627       557/1177
(47 %)
30 diff
(97.5 %id)
CR595138 Placenta Cot 25-normalized BMP4.e 28 to 1703 1 to 1676 exact     1676/1676
(100 %)
0 diff
(100 %id)
BX337513 Placenta Cot 25-normalized BMP4.e 28 to 939 1 to 909       909/909
(100 %)
4 diff
(99.6 %id)
BM548768 duodenal adenocarcinoma, cell line, small intestine BMP4.e 33 to 976 1 to 955       955/1020
(93 %)
27 diff
(97.4 %id)
BF983505 duodenal adenocarcinoma, cell line, small intestine BMP4.e 37 to 722 1 to 684       684/684
(100 %)
3 diff
(99.6 %id)
CA495299   BMP4.e 39 to 902 1 to 876       876/877
(99 %)
18 diff
(98.0 %id)
BE873272 adenocarcinoma, colon BMP4.e 43 to 792 1 to 734       734/765
(95 %)
21 diff
(97.3 %id)
BQ694422 adipose BMP4.e 46 to 568 1 to 521       521/521
(100 %)
2 diff
(99.7 %id)
BF983498 duodenal adenocarcinoma, cell line, small intestine BMP4.e 46 to 712 26 to 692       667/694
(96 %)
12 diff
(98.3 %id)
BE867398 adenocarcinoma, colon BMP4.e 62 to 871 1 to 800       800/991
(80 %)
28 diff
(97.2 %id)
BG248621 adenocarcinoma cell line, colon BMP4.e 73 to 781 6 to 716       718/717
(100 %)
17 diff
(97.7 %id)
BQ641785 eye, normal pigmented retinal epithelium BMP4.e 74 to 911 1 to 848       848/921
(92 %)
18 diff
(98.1 %id)
CN409812 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells BMP4.e 82 to 698 1 to 617       617/617
(100 %)
1 diff
(99.9 %id)
BM698963 eye, fetal eyes BMP4.e 87 to 475 1 to 389       389/389
(100 %)
0 diff
(100 %id)
BE870587 adenocarcinoma, colon BMP4.e 89 to 866 1 to 781       781/956
(81 %)
29 diff
(97.0 %id)
BG823560 adenocarcinoma cell line, colon BMP4.e 98 to 909 1 to 822       822/824
(99 %)
34 diff
(95.9 %id)
DN999327   BMP4.e 98 to 693 1 to 595       595/595
(100 %)
7 diff
(98.9 %id)
BG387049 adenocarcinoma cell line, colon BMP4.e 100 to 907 1 to 814       814/965
(84 %)
21 diff
(97.9 %id)
BE868837 adenocarcinoma, colon BMP4.e 101 to 701 1 to 605       605/705
(85 %)
11 diff
(98.5 %id)
BE871951 adenocarcinoma, colon BMP4.e 102 to 865 1 to 754       754/758
(99 %)
16 diff
(97.9 %id)
CR615807 Placenta Cot 25-normalized BMP4.e 104 to 1061 1 to 958       958/958
(100 %)
0 diff
(100 %id)
BX346664 Placenta Cot 25-normalized BMP4.e 104 to 1061 1 to 952       952/952
(100 %)
8 diff
(99.2 %id)
BX371019 Placenta Cot 25-normalized BMP4.e 104 to 1059 1 to 949       949/949
(100 %)
10 diff
(99.0 %id)
BX388856 Placenta Cot 25-normalized BMP4.e 104 to 951 1 to 849       849/849
(100 %)
5 diff
(99.5 %id)
BM557669 duodenal adenocarcinoma, cell line, small intestine BMP4.e 105 to 909 1 to 815       815/1020
(79 %)
20 diff
(98.1 %id)
CV803108 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass BMP4.e 105 to 784 1 to 673       673/814
(82 %)
14 diff
(98.3 %id)
AA463224   BMP4.e 108 to 639 13 to 534       502/534
(94 %)
24 diff
(95.6 %id)
TI_57183141   BMP4.e 156 to 1021 38 to 906       869/968
(89 %)
31 diff
(96.8 %id)
BI769337 pooled lung and spleen BMP4.e 157 to 1021 1 to 868       868/930
(93 %)
25 diff
(97.4 %id)
CN409808 embryonic stem cells, DMSO-treated H9 cellline BMP4.e 198 to 779 1 to 593       604/593
(101 %)
57 diff
(90.4 %id)
DN996909 breast cancer, Mammary gland (cancer tissue) BMP4.e 198 to 654 16 to 474       460/474
(97 %)
6 diff
(98.8 %id)
BQ651757 hepatocellular carcinoma, cell line, Liver BMP4.e 203 to 999 12 to 815       804/914
(87 %)
22 diff
(97.6 %id)
TI_1948093224   BMP4.e 204 to 584 122 to 502       381/1361
(27 %)
6 diff
(99.6 %id)
TI_1948093382   BMP4.e 204 to 649 125 to 564   fully sequenced,   440/564
(78 %)
6 diff
(99.0 %id)
TI_1948093534   BMP4.e 204 to 809 123 to 730       608/1358
(44 %)
26 diff
(98.1 %id)
CV023944 mixed BMP4.e 211 to 832 1 to 622       622/624
(99 %)
2 diff
(99.7 %id)
BQ650384 hepatocellular carcinoma, cell line, Liver BMP4.e 211 to 1052 1 to 869       869/924
(94 %)
48 diff
(94.9 %id)
BI252078 hepatocellular carcinoma, cell line, Liver BMP4.e 213 to 928 1 to 714       714/714
(100 %)
7 diff
(99.1 %id)
BU191628 epidermoid carcinoma, cell line, salivary gland BMP4.e 214 to 975 1 to 774       774/931
(83 %)
27 diff
(97.1 %id)
CN409796 embryonic stem cells, DMSO-treated H9 cellline BMP4.e 216 to 735 1 to 520       520/520
(100 %)
3 diff
(99.5 %id)
BX326113 Placenta Cot 25-normalized BMP4.e 219 to 1096 875 to 1       875/877
(99 %)
28 diff
(96.9 %id)
BM475074 duodenal adenocarcinoma, cell line, small intestine BMP4.e 221 to 672 1 to 456       456/911
(50 %)
7 diff
(99.3 %id)
D30751 placenta BMP4.e 224 to 1527 97 to 1400       1304/1400
(93 %)
6 diff
(99.6 %id)
BF928257 nervous_tumor BMP4.e 269 to 667 1 to 399       399/399
(100 %)
3 diff
(99.3 %id)
BF928454 nervous_tumor BMP4.e 269 to 670 1 to 402       402/402
(100 %)
5 diff
(98.8 %id)
BG751606 eye, normal pigmented retinal epithelium BMP4.e 307 to 981 1 to 675       675/675
(100 %)
1 diff
(99.9 %id)
BX325816 Neuroblastoma Cot 25-normalized BMP4.e 349 to 1197 1 to 844       844/873
(96 %)
28 diff
(96.8 %id)
BE873237 adenocarcinoma, colon BMP4.e 492 to 1341 1 to 849       849/929
(91 %)
43 diff
(95.4 %id)
BX347142 Placenta Cot 25-normalized BMP4.e 498 to 1238 729 to 6       725/820
(88 %)
14 diff
(98.3 %id)
BF810890 colon_ins BMP4.e 538 to 842 12 to 315       304/315
(96 %)
11 diff
(96.6 %id)
CA454850   BMP4.e 564 to 1451 1 to 897       897/898
(99 %)
18 diff
(98.0 %id)
BF984185 duodenal adenocarcinoma, cell line, small intestine BMP4.e 567 to 1270 1 to 698       698/843
(82 %)
16 diff
(98.2 %id)
AA333903   BMP4.e 574 to 889 1 to 321       321/351
(91 %)
9 diff
(97.5 %id)
TI_1948093076   BMP4.e 579 to 1436 982 to 125       858/1319
(65 %)
0 diff
(100 %id)
BG386750 adenocarcinoma cell line, colon BMP4.e 588 to 1092 1 to 504       504/506
(99 %)
2 diff
(99.7 %id)
BG386546 adenocarcinoma cell line, colon BMP4.e 588 to 1387 1 to 791       791/792
(99 %)
23 diff
(97.1 %id)
BM927845 hepatocellular carcinoma, cell line, Liver BMP4.e 588 to 1416 13 to 841   AAA   829/1020
(81 %)
7 diff
(99.4 %id)
BE304524 adenocarcinoma cell line, colon BMP4.e 607 to 1269 1 to 663       663/667
(99 %)
3 diff
(99.6 %id)
CN409797 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 BMP4.e 617 to 1210 1 to 594       594/594
(100 %)
1 diff
(99.9 %id)
TI_1948093225   BMP4.e 619 to 1441 946 to 119       828/1360
(60 %)
16 diff
(98.9 %id)
TI_1948093383   BMP4.e 619 to 1441 951 to 119   fully sequenced,   833/951
(87 %)
22 diff
(97.7 %id)
D51376   BMP4.e 653 to 957 1 to 302       302/307
(98 %)
11 diff
(96.5 %id)
CN409799 embryonic stem cells, DMSO-treated H9 cellline BMP4.e 660 to 1159 9 to 508       500/508
(98 %)
6 diff
(98.9 %id)
BG747941 eye, normal pigmented retinal epithelium BMP4.e 664 to 1410 1 to 744       744/744
(100 %)
9 diff
(98.8 %id)
BX364856 Placenta Cot 25-normalized BMP4.e 679 to 1708 1032 to 2       1031/1083
(95 %)
0 diff
(100 %id)
BG108575 Bone, osteosarcoma, cell line BMP4.e 689 to 1479 1 to 779       779/960
(81 %)
38 diff
(96.1 %id)
BF768876 epid_tumor BMP4.e 714 to 810 112 to 17     Submitted on the opposite strand 96/114
(84 %)
0 diff
(100 %id)
BM687933 eye, Retina Foveal and Macular BMP4.e 714 to 1395 1 to 682       682/682
(100 %)
9 diff
(98.7 %id)
BX367836 Placenta Cot 25-normalized BMP4.e 721 to 1571 1 to 850       850/850
(100 %)
7 diff
(99.2 %id)
BX367884 Placenta Cot 25-normalized BMP4.e 723 to 1545 1 to 819       819/826
(99 %)
9 diff
(99.0 %id)
BF926988 nervous_tumor BMP4.e 726 to 954 12 to 237       226/237
(95 %)
8 diff
(96.7 %id)
BX371018 Placenta Cot 25-normalized BMP4.e 726 to 1667 938 to 1       938/948
(98 %)
42 diff
(95.6 %id)
TI_154044725   BMP4.e 736 to 1568 56 to 888   AAA Submitted on the opposite strand 833/890
(93 %)
2 diff
(99.8 %id)
BQ645840 hepatocellular carcinoma, cell line, Liver BMP4.e 745 to 1343 1 to 604       604/1046
(57 %)
25 diff
(97.7 %id)
BX337512 Placenta Cot 25-normalized BMP4.e 752 to 1715 967 to 1       967/967
(100 %)
11 diff
(98.9 %id)
BX388361 Neuroblastoma Cot 25-normalized BMP4.e 760 to 1719 949 to 1       949/1003
(94 %)
40 diff
(96.1 %id)
BG026835 Bone, osteosarcoma, cell line BMP4.e 763 to 1415 1 to 661       661/1190
(55 %)
17 diff
(98.6 %id)
CB159290 Liver BMP4.e 775 to 1347 1 to 573       573/573
(100 %)
0 diff
(100 %id)
BX389615 Placenta Cot 25-normalized BMP4.e 799 to 1693 1 to 908   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 908/908
(100 %)
6 diff
(99.4 %id)
BX347288 Placenta Cot 25-normalized BMP4.e 812 to 1703 39 to 930       892/935
(95 %)
7 diff
(99.3 %id)
TI_149291024   BMP4.e 846 to 1589 806 to 63       744/806
(92 %)
0 diff
(100 %id)
CB158402 Liver BMP4.e 848 to 1367 1 to 520       520/520
(100 %)
4 diff
(99.3 %id)
AA479140 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BMP4.e 872 to 1236 1 to 365   fully sequenced,   365/365
(100 %)
9 diff
(97.6 %id)
CA428190 Bone, Subchondral Bone BMP4.e 884 to 1585 702 to 1       702/702
(100 %)
2 diff
(99.8 %id)
BU628523 Bone, Enchondroma cell line BMP4.e 891 to 1585 695 to 1       695/695
(100 %)
0 diff
(100 %id)
EL946661 eyeball BMP4.e 893 to 1465 1 to 574       574/574
(100 %)
5 diff
(99.2 %id)
AW362700 colon BMP4.e 916 to 1496 615 to 38       578/615
(93 %)
0 diff
(100 %id)
FN119737 breast carcinoma BMP4.e 926 to 1034 110 to 1     Submitted on the opposite strand 110/110
(100 %)
1 diff
(99.1 %id)
AA358807 lung BMP4.e 930 to 1202 1 to 272       272/272
(100 %)
2 diff
(99.3 %id)
TI_154048076   BMP4.e 945 to 1698 839 to 85   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 755/986
(76 %)
12 diff
(98.8 %id)
BM852074 stomach BMP4.e 949 to 1342 1 to 393       393/393
(100 %)
2 diff
(99.5 %id)
AW602572 breast BMP4.e 977 to 1255 1 to 279       279/383
(72 %)
3 diff
(99.3 %id)
BQ573792 Chondrosarcoma Grade II, Left Pelvis BMP4.e 1001 to 1585 585 to 1       585/585
(100 %)
0 diff
(100 %id)
BM994667 lung, Metastatic Chondrosarcoma BMP4.e 1002 to 1585 584 to 1       584/584
(100 %)
1 diff
(99.9 %id)
AI886718 lymph node, lymphoma, follicular mixed small and largecell BMP4.e 1016 to 1571 545 to 1       545/545
(100 %)
37 diff
(93.3 %id)
BF434094 fibrotheoma, ovary BMP4.e 1027 to 1567 541 to 1       541/541
(100 %)
1 diff
(99.9 %id)
D51188   BMP4.e 1034 to 1559 533 to 9       525/533
(98 %)
0 diff
(100 %id)
BM973778 lung BMP4.e 1037 to 1585 549 to 1       549/549
(100 %)
3 diff
(99.5 %id)
CA413164 Chondrosarcoma Grade II, Left Pelvis BMP4.e 1040 to 1698 681 to 19   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 663/663
(100 %)
5 diff
(99.3 %id)
TI_149295890   BMP4.e 1043 to 1730 784 to 101   AAA   684/914
(74 %)
24 diff
(97.4 %id)
BM998225 lung, Metastatic Chondrosarcoma BMP4.e 1048 to 1584 537 to 1       537/537
(100 %)
0 diff
(100 %id)
BM561296 duodenal adenocarcinoma, cell line, small intestine BMP4.e 1053 to 1567 1 to 515   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 515/515
(100 %)
0 diff
(100 %id)
AA777371 liver and spleen BMP4.e 1055 to 1567 513 to 1       513/513
(100 %)
0 diff
(100 %id)
BE771212 prostate_tumor BMP4.e 1059 to 1446 20 to 406       387/409
(94 %)
10 diff
(97.6 %id)
BE771215 prostate_tumor BMP4.e 1067 to 1446 1 to 379       379/382
(99 %)
7 diff
(98.2 %id)
AI312731 lung BMP4.e 1072 to 1566 494 to 1       494/510
(96 %)
43 diff
(91.6 %id)
TI_149289220   BMP4.e 1074 to 1590 587 to 70       518/756
(68 %)
0 diff
(100 %id)
BX378330 Placenta Cot 25-normalized BMP4.e 1078 to 1702 637 to 12       626/801
(78 %)
0 diff
(100 %id)
CN409809 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 BMP4.e 1083 to 1567 1 to 485   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 485/485
(100 %)
0 diff
(100 %id)
AA468551 colon BMP4.e 1090 to 1567 479 to 2       478/479
(99 %)
0 diff
(100 %id)
BF819079 colon_ins BMP4.e 1099 to 1464 372 to 2     Submitted on the opposite strand 371/397
(93 %)
0 diff
(100 %id)
BF806796 colon_ins BMP4.e 1128 to 1512 3 to 386       384/386
(99 %)
6 diff
(98.5 %id)
AA576646 colon, colon tumor RER+ BMP4.e 1138 to 1692 550 to 1       550/550
(100 %)
8 diff
(98.6 %id)
AW362712 colon BMP4.e 1149 to 1498 10 to 359       350/378
(92 %)
5 diff
(98.7 %id)
AW362728 colon BMP4.e 1149 to 1498 26 to 375       350/385
(90 %)
4 diff
(99.0 %id)
BQ363411 stomach BMP4.e 1149 to 1503 375 to 21       355/387
(91 %)
0 diff
(100 %id)
T54230 placenta BMP4.e 1150 to 1545 10 to 418   fully sequenced,   409/418
(97 %)
6 diff
(98.6 %id)
AW753810 colon BMP4.e 1154 to 1538 406 to 22       385/406
(94 %)
11 diff
(97.3 %id)
AA873550 Kidney BMP4.e 1161 to 1725 558 to 1       558/558
(100 %)
7 diff
(98.8 %id)
FN054642 breast carcinoma BMP4.e 1165 to 1238 74 to 1     Submitted on the opposite strand 74/75
(98 %)
1 diff
(98.7 %id)
AA730073 pooled germ cell tumors BMP4.e 1165 to 1539 371 to 1       371/371
(100 %)
18 diff
(95.2 %id)
AW753502 colon BMP4.e 1166 to 1440 275 to 1       275/275
(100 %)
20 diff
(92.8 %id)
BE771216 prostate_tumor BMP4.e 1183 to 1332 12 to 159       148/159
(93 %)
11 diff
(93.1 %id)
BQ308055 breast BMP4.e 1190 to 1520 30 to 358       329/358
(91 %)
6 diff
(98.4 %id)
AA479141 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BMP4.e 1206 to 1567 361 to 1   fully sequenced,   361/361
(100 %)
2 diff
(99.5 %id)
AA463225   BMP4.e 1214 to 1727 513 to 2       512/513
(99 %)
0 diff
(100 %id)
FN065186 breast carcinoma BMP4.e 1215 to 1317 1 to 105       105/105
(100 %)
3 diff
(97.2 %id)
BM673036 eye, optic nerve BMP4.e 1220 to 1585 366 to 1       366/366
(100 %)
2 diff
(99.5 %id)
AW362081 colon BMP4.e 1246 to 1458 240 to 27       214/244
(87 %)
0 diff
(100 %id)
AW378785 head_neck BMP4.e 1246 to 1446 201 to 1       201/205
(98 %)
3 diff
(98.6 %id)
AW390826 stomach BMP4.e 1246 to 1448 206 to 1       206/210
(98 %)
5 diff
(97.7 %id)
AW390848 stomach BMP4.e 1246 to 1432 187 to 1       187/191
(97 %)
5 diff
(97.4 %id)
BU683974 lung, Primary Lung Cystic Fibrosis EpithelialCells BMP4.e 1251 to 1730 500 to 19   AAA   482/482
(100 %)
4 diff
(99.2 %id)
T28171 colon BMP4.e 1255 to 1489 1 to 235       235/236
(99 %)
2 diff
(99.2 %id)
T54134 placenta BMP4.e 1277 to 1472 196 to 1   fully sequenced,   196/196
(100 %)
2 diff
(99.0 %id)
FN144067 breast carcinoma BMP4.e 1281 to 1361 80 to 1     Submitted on the opposite strand 80/80
(100 %)
1 diff
(98.8 %id)
BU594683 mixed (pool of 40 RNAs) BMP4.e 1288 to 1725 1 to 441       441/870
(50 %)
5 diff
(99.5 %id)
DB519981 testis BMP4.e 1315 to 1730 1 to 415   AAA Submitted on the opposite strand 415/415
(100 %)
5 diff
(98.8 %id)
AW379982 head_neck BMP4.e 1330 to 1498 8 to 173       166/181
(91 %)
6 diff
(96.7 %id)
AW884062 ovary BMP4.e 1331 to 1524 1 to 193       193/211
(91 %)
10 diff
(95.3 %id)
AW379983 head_neck BMP4.e 1337 to 1498 9 to 167       159/175
(90 %)
6 diff
(96.6 %id)
AW815472 stomach BMP4.e 1337 to 1498 169 to 8       162/176
(92 %)
0 diff
(100 %id)
AW815758 stomach BMP4.e 1337 to 1490 8 to 163       156/182
(85 %)
8 diff
(95.7 %id)
AW609632 stomach BMP4.e 1342 to 1538 1 to 197       197/204
(96 %)
9 diff
(95.6 %id)
AW378783 head_neck BMP4.e 1350 to 1458 1 to 109       109/121
(90 %)
2 diff
(98.4 %id)
AW815719 stomach BMP4.e 1350 to 1486 1 to 136       136/136
(100 %)
2 diff
(98.6 %id)
BU566917 mixed (pool of 40 RNAs) BMP4.e 1369 to 1731 1 to 362       362/401
(90 %)
5 diff
(98.8 %id)
FN157481 breast carcinoma BMP4.e 1410 to 1468 1 to 58       58/58
(100 %)
1 diff
(98.3 %id)
AW264254 brain, three pooled meningiomas BMP4.e 1465 to 1693 231 to 1       231/231
(100 %)
4 diff
(98.3 %id)
BU737392 eye, fetal eyes BMP4.e 1472 to 1730 275 to 19   AAA   257/257
(100 %)
2 diff
(99.3 %id)
CN414994 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells BMP4.e 1477 to 1730 303 to 50   AAA Submitted on the opposite strand 254/254
(100 %)
0 diff
(100 %id)
FN077441 breast carcinoma BMP4.e 1501 to 1568 71 to 3     Submitted on the opposite strand 69/72
(95 %)
0 diff
(100 %id)
AW191034 adenocarcinoma, Pancreas BMP4.e 1507 to 1733 230 to 2   tiling clone,   229/230
(99 %)
0 diff
(100 %id)
AW148594 brain, tumor, 5 pooled (see description) BMP4.e 1508 to 1700 193 to 1       193/193
(100 %)
1 diff
(99.5 %id)
DA727482   BMP4.e 1578 to 1730 2 to 154   capped   153/153
(100 %)
2 diff
(98.7 %id)
BI116638 lung, small cell carcinoma BMP4.f 1 to 759 1 to 767   tiling clone,   767/888
(86 %)
33 diff
(96.3 %id)
BM006159 hepatocellular carcinoma, cell line, Liver BMP4.f 32 to 638 1 to 606       606/726
(83 %)
4 diff
(99.5 %id)
BQ647651 hepatocellular carcinoma, cell line, Liver BMP4.f 32 to 797 17 to 788       770/963
(79 %)
33 diff
(96.6 %id)
TI_59386115   BMP4.f 32 to 638 63 to 668       606/726
(83 %)
4 diff
(99.5 %id)
BI252361 hepatocellular carcinoma, cell line, Liver BMP4.f 33 to 746 1 to 726       726/726
(100 %)
21 diff
(97.2 %id)
BQ064757 lymph, lymphoma, cell line BMP4.f 36 to 971 1 to 948   tiling clone,   948/981
(96 %)
32 diff
(96.8 %id)
BU190376 hepatocellular carcinoma, cell line, Liver BMP4.f 36 to 1112 1 to 1079   tiling clone,   1079/1079
(100 %)
34 diff
(96.9 %id)
BE304763 adenocarcinoma cell line, colon BMP4.f 70 to 724 1 to 648       648/727
(89 %)
28 diff
(96.2 %id)
BE512843 adenocarcinoma cell line, colon BMP4.f 71 to 903 1 to 839   tiling clone,   839/840
(99 %)
26 diff
(97.0 %id)
BE877424 large cell carcinoma, undifferentiated, lung BMP4.g 1 to 756 1 to 760 Q213H D216E E218G R219K F221L ... tiling clone,   760/760
(100 %)
16 diff
(97.9 %id)
BE617092 adenocarcinoma, colon BMP4.h-u 455 to 534 470 to 553   tiling clone,   504/553
(91 %)
17 diff
(97.0 %id)
BE961992 adenocarcinoma, colon BMP4.h-u 667 to 1413 739 to 1 V12W A13P R14G L15S F16S ... tiling clone,   739/823
(89 %)
0 diff
(100 %id)
AA234466 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BMP4.h-u 715 to 989 1 to 276   tiling clone,   276/276
(100 %)
2 diff
(99.3 %id)
AI285917 pooled BMP4.h-u 973 to 1423 453 to 1 C58G T61V R62H W64R A65G ... tiling clone,   453/453
(100 %)
2 diff
(99.6 %id)
AI282133 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus BMP4.h-u 975 to 1423 451 to 1 C58G T61V R62H W64R A65G ... tiling clone,   451/451
(100 %)
2 diff
(99.6 %id)
AW592775 pooled BMP4.h-u 1114 to 1382 271 to 1       271/271
(100 %)
4 diff
(98.6 %id)
BU624479 cell lines, Enchondroma BMP4.i 1 to 602 621 to 19 H40P E41R L42A F43I S44F ... tiling clone, AAA   603/603
(100 %)
4 diff
(99.4 %id)
BM721920 eye, fetal eye BMP4.j-u 1 to 444 1 to 444 P25T tiling clone, fully sequenced,   444/444
(100 %)
1 diff
(99.8 %id)
BM678435 eye, fetal eye BMP4.j-u 414 to 961 561 to 14   tiling clone, fully sequenced, AAA   548/548
(100 %)
0 diff
(100 %id)
CN409801 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells BMP4.k 1 to 495 1 to 495 exact tiling clone,   495/495
(100 %)
2 diff
(99.6 %id)
BG328518 adenocarcinoma cell line, colon BMP4.l 1 to 506 1 to 506   tiling clone,   506/506
(100 %)
1 diff
(99.9 %id)
BE872539 adenocarcinoma, colon BMP4.l 36 to 734 1 to 691 P71R Q72S P73L S74A K75R ... tiling clone,   691/968
(71 %)
17 diff
(98.3 %id)
BG823942 adenocarcinoma cell line, colon BMP4.l 38 to 585 6 to 560   tiling clone,   562/560
(100 %)
8 diff
(98.6 %id)
N86263   BMP4.l 62 to 267 1 to 203       203/203
(100 %)
6 diff
(97.1 %id)
BX093833   BMP4.l 73 to 471 1 to 398       398/402
(99 %)
3 diff
(99.3 %id)
CN409806 embryonic stem cells, DMSO-treated H9 cellline BMP4.l 86 to 272 1 to 187       187/187
(100 %)
0 diff
(100 %id)
CN409811 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 BMP4.l 86 to 619 1 to 535   tiling clone,   535/535
(100 %)
1 diff
(99.9 %id)
N94356 senescent fibroblast BMP4.m-u 1 to 458 473 to 11 S15Q L16S R17A G18W G20E ... tiling clone,   463/473
(97 %)
0 diff
(100 %id)
CN409803 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells Gene BMP4, variant not shown         This clone was ignored    
BE612406 adenocarcinoma, ovary Gene BMP4, variant not shown         This clone was ignored    
BE962618 adenocarcinoma, ovary Gene BMP4, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j-u, .k, .l, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI