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Gene BLVRATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
270 supporting clones for gene BLVRA back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BP374834 umbilical cord .a 1 to 584 1 to 584   tiling clone,   584/584
(100 %)
1 diff
(99.9 %id)
BP374862 umbilical cord .a 1 to 580 1 to 580       580/580
(100 %)
10 diff
(98.3 %id)
AK291862 skeletal muscle .a 7 to 1166 1 to 1160 exact tiling clone,   1160/1160
(100 %)
1 diff
(100.0 %id)
BP233854 coronary artery .a 7 to 593 1 to 588       588/588
(100 %)
9 diff
(98.5 %id)
DA893359 skeletal muscle .a 8 to 517 2 to 511   capped   510/510
(100 %)
0 diff
(100 %id)
CD696325 normal nasopharynx .a 11 to 477 16 to 482       467/482
(96 %)
8 diff
(98.4 %id)
BG494358 lung, mucoepidermoid carcinoma .a 30 to 630 1 to 602       602/605
(99 %)
3 diff
(99.6 %id)
BG537475 lung .a 32 to 521 1 to 494       494/879
(56 %)
13 diff
(98.6 %id)
W58736 heart .a 130 to 475 1 to 344       344/344
(100 %)
7 diff
(98.0 %id)
R78219 placenta .b 1 to 260 1 to 258   tiling clone, fully sequenced,   258/258
(100 %)
10 diff
(96.2 %id)
TI_151749954   .b 162 to 568 483 to 77       407/884
(46 %)
2 diff
(99.8 %id)
NM_000712.3   .b 166 to 1237 1 to 1072 exact RefSeq, AAA   1072/1072
(100 %)
0 diff
(100 %id)
BM710258 eye, RPE and Choroid .b 166 to 560 1 to 395       395/395
(100 %)
0 diff
(100 %id)
BG721540 testis .b 168 to 879 1 to 712       712/712
(100 %)
5 diff
(99.3 %id)
DN914603   .b 172 to 582 1 to 411       411/420
(97 %)
8 diff
(98.1 %id)
BF677514 Prostate .b 172 to 824 1 to 632       574/756
(75 %)
46 diff
(94.0 %id)
BF700240 brain, primitive neuroectoderm .b 172 to 887 1 to 722       722/906
(79 %)
42 diff
(95.4 %id)
BG492852 lung, mucoepidermoid carcinoma .b 172 to 770 1 to 608       605/967
(62 %)
18 diff
(98.2 %id)
BG493454 lung, mucoepidermoid carcinoma .b 172 to 828 1 to 660       658/660
(99 %)
7 diff
(99.0 %id)
BC005902 Brain, primitive neuroectodermal .b 173 to 1246 1 to 1074 A3T L121S available from MGC, AAA   1074/1074
(100 %)
6 diff
(99.5 %id)
BC008456 Prostate .b 173 to 1242 1 to 1070 exact tiling clone, available from MGC, AAA   1070/1070
(100 %)
2 diff
(99.9 %id)
BG699268 brain, hippocampus .b 173 to 956 1 to 784       784/784
(100 %)
6 diff
(99.3 %id)
FN118315 breast carcinoma .b 175 to 249 9 to 83       75/83
(90 %)
6 diff
(92.8 %id)
DT220427 brain .b 178 to 785 1 to 608       608/608
(100 %)
2 diff
(99.7 %id)
CB126123 Liver .b 178 to 756 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
CB126249 Liver .b 178 to 820 1 to 643       643/643
(100 %)
2 diff
(99.7 %id)
CB130746 Liver .b 178 to 438 1 to 261       261/261
(100 %)
2 diff
(99.3 %id)
AU280570   .b 178 to 743 1 to 566       566/566
(100 %)
4 diff
(99.3 %id)
BP216114 corpus callosum .b 179 to 765 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
DT217332 brain .b 179 to 822 1 to 644       644/644
(100 %)
2 diff
(99.7 %id)
FN143284 breast carcinoma .b 179 to 254 9 to 84       76/86
(88 %)
7 diff
(91.9 %id)
DB469863 hippocampus .b 180 to 626 1 to 446       446/446
(100 %)
7 diff
(98.5 %id)
DB492951 hypothalamus .b 180 to 469 1 to 289       289/294
(98 %)
9 diff
(97.0 %id)
DB502111 hypothalamus .b 180 to 645 1 to 466       466/466
(100 %)
1 diff
(99.8 %id)
CB994221 placenta, pre-eclamptic placenta .b 180 to 868 29 to 730       702/831
(84 %)
27 diff
(96.8 %id)
CB997837 placenta, pre-eclamptic placenta .b 180 to 849 29 to 709       681/809
(84 %)
30 diff
(96.3 %id)
DA483067 brain .b 181 to 880 2 to 701   capped   700/701
(99 %)
3 diff
(99.6 %id)
BI667918 brain, hypothalamus .b 183 to 848 1 to 666       666/666
(100 %)
5 diff
(99.3 %id)
BM563558 astrocytoma grade IV, cell line, brain .b 183 to 1001 1 to 825       825/995
(82 %)
20 diff
(98.0 %id)
BM770944 Ascites, stomach .b 183 to 562 8 to 387       380/380
(100 %)
2 diff
(99.5 %id)
TI_44343875   .b 185 to 848 88 to 751       664/751
(88 %)
7 diff
(99.1 %id)
CD690591 normal nasopharynx .b 186 to 444 30 to 290       261/290
(90 %)
9 diff
(96.9 %id)
X93086   .b 187 to 1237 1 to 1049 A154S G155D E160D AAA   1049/1049
(100 %)
12 diff
(98.9 %id)
BG539058 lung .b 188 to 886 1 to 703       703/889
(79 %)
25 diff
(97.2 %id)
BP431529   .b 189 to 568 1 to 381       381/385
(98 %)
4 diff
(99.0 %id)
BQ130792.
matches multiple genes
insulinoma, Pancreas .b 191 to 401 22 to 232     also hits gene OAZ1andSPPL2B 211/232
(90 %)
9 diff
(96.2 %id)
DB465066 hippocampus .b 192 to 630 1 to 439       439/439
(100 %)
1 diff
(99.8 %id)
BU156742 melanotic melanoma, cell line, skin .b 193 to 1103 1 to 915       915/991
(92 %)
12 diff
(98.8 %id)
BU196520 melanotic melanoma, cell line, skin .b 193 to 879 1 to 688       688/910
(75 %)
7 diff
(99.3 %id)
DN997856 breast cancer, Mammary gland (cancer tissue) .b 193 to 868 1 to 676       676/676
(100 %)
5 diff
(99.3 %id)
U34877   .b 193 to 1244 1 to 1052 A3T     1052/1052
(100 %)
2 diff
(99.9 %id)
AA374438 lung .b 196 to 473 1 to 279       279/279
(100 %)
11 diff
(96.1 %id)
CN260925 embryonic stem cells, cell lines H1, H7, andH9 .b 197 to 831 1 to 635       635/635
(100 %)
2 diff
(99.7 %id)
AA740186 2 pooled tumors (clear cell type), Kidney .b 200 to 568 369 to 1       369/369
(100 %)
6 diff
(98.4 %id)
BU963748 mixed (pool of 40 RNAs) .b 200 to 708 1 to 510       510/817
(62 %)
9 diff
(98.9 %id)
BP428781   .b 200 to 544 9 to 354       346/354
(97 %)
2 diff
(99.5 %id)
BP430271   .b 200 to 521 9 to 330       322/330
(97 %)
1 diff
(99.7 %id)
BG493957 lung, mucoepidermoid carcinoma .b 201 to 882 1 to 690       690/736
(93 %)
27 diff
(96.4 %id)
BF670477 muscle (skeletal) .b 202 to 880 1 to 666       666/798
(83 %)
26 diff
(96.8 %id)
BG396275 eye, retinoblastoma .b 202 to 895 1 to 693       693/694
(99 %)
7 diff
(99.0 %id)
BG539360 lung .b 202 to 873 1 to 674       674/863
(78 %)
19 diff
(97.8 %id)
BU935135 mixed (pool of 40 RNAs) .b 202 to 708 1 to 509       509/907
(56 %)
14 diff
(98.5 %id)
BU942764 mixed (pool of 40 RNAs) .b 202 to 878 1 to 678       678/816
(83 %)
27 diff
(96.7 %id)
CK002805 brain/CNS, Human Brain - Cerebellar Cortex .b 202 to 840 1 to 634       634/634
(100 %)
14 diff
(97.8 %id)
BG941699 blood .b 204 to 561 1 to 358       358/358
(100 %)
2 diff
(99.5 %id)
BX955317   .b 204 to 865 1 to 662       662/662
(100 %)
2 diff
(99.7 %id)
BG536554 lung .b 204 to 1071 1 to 861       861/897
(95 %)
38 diff
(95.8 %id)
AV740574 cord Blood .b 205 to 708 48 to 535       488/548
(89 %)
19 diff
(96.6 %id)
DW430977 Liver .b 205 to 458 18 to 271       254/271
(93 %)
8 diff
(97.1 %id)
DB447254 testis .b 207 to 626 1 to 421       421/421
(100 %)
2 diff
(99.6 %id)
DB481575 hippocampus .b 207 to 673 1 to 467       467/467
(100 %)
1 diff
(99.8 %id)
DB487767 hypothalamus .b 207 to 486 1 to 281       278/382
(72 %)
8 diff
(98.0 %id)
DB490749 hypothalamus .b 207 to 503 1 to 297       297/309
(96 %)
9 diff
(97.1 %id)
DB492779 hypothalamus .b 207 to 663 1 to 455       455/455
(100 %)
2 diff
(99.6 %id)
DB494737 hypothalamus .b 207 to 700 1 to 494       494/494
(100 %)
0 diff
(100 %id)
DB495519 hypothalamus .b 207 to 708 1 to 502       502/503
(99 %)
3 diff
(99.5 %id)
DA481223   .b 210 to 748 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
BQ680920 melanotic melanoma, cell line, skin .b 213 to 1097 1 to 898       898/905
(99 %)
25 diff
(97.3 %id)
AA873272 2 pooled tumors (clear cell type), Kidney .b 225 to 568 345 to 2       344/345
(99 %)
2 diff
(99.5 %id)
AA878546 2 pooled tumors (clear cell type), Kidney .b 225 to 566 342 to 2       341/349
(97 %)
4 diff
(98.9 %id)
AI803306   .b 225 to 568 344 to 1       344/351
(98 %)
1 diff
(99.8 %id)
BF056096 pooled .b 225 to 568 344 to 1       344/344
(100 %)
1 diff
(99.8 %id)
BF109565 pooled .b 225 to 568 344 to 1       344/358
(96 %)
1 diff
(99.8 %id)
BP429830   .b 225 to 568 15 to 358       344/366
(93 %)
8 diff
(97.9 %id)
FN098915 breast carcinoma .b 227 to 329 103 to 1     Submitted on the opposite strand 103/103
(100 %)
1 diff
(99.1 %id)
R78220 placenta .b 227 to 503 288 to 10   fully sequenced,   279/288
(96 %)
7 diff
(97.6 %id)
AW665545 pooled .b 227 to 534 308 to 1       308/308
(100 %)
1 diff
(99.7 %id)
BG421882 Kidney, renal cell adenocarcinoma .b 228 to 964 14 to 739       724/930
(77 %)
35 diff
(96.3 %id)
AW392014 stomach .b 230 to 427 208 to 13       196/222
(88 %)
1 diff
(99.6 %id)
AA877927 colon, colon tumor RER+ .b 235 to 519 285 to 1       285/285
(100 %)
1 diff
(99.7 %id)
BQ683620 melanotic melanoma, cell line, skin .b 235 to 880 1 to 646       646/950
(68 %)
5 diff
(99.5 %id)
AI002065 pooled germ cell tumors .b 238 to 568 330 to 1       330/330
(100 %)
5 diff
(98.5 %id)
CV027435 mixed .b 249 to 855 1 to 607       607/607
(100 %)
2 diff
(99.7 %id)
AA579621 colon, colon tumor RER+ .b 249 to 566 319 to 2       318/319
(99 %)
1 diff
(99.7 %id)
TI_1948074436   .b 249 to 1115 131 to 1013   fully sequenced,   883/1013
(87 %)
29 diff
(97.2 %id)
TI_1948074623   .b 249 to 631 126 to 508   fully sequenced,   383/508
(75 %)
1 diff
(99.9 %id)
TI_1948074809   .b 249 to 982 130 to 874       745/1406
(52 %)
21 diff
(98.6 %id)
TI_1948074997   .b 249 to 809 131 to 691   fully sequenced,   561/691
(81 %)
0 diff
(100 %id)
AA594489 colon, colon tumor RER+ .b 255 to 568 314 to 1       314/314
(100 %)
0 diff
(100 %id)
CV027519 mixed .b 259 to 806 11 to 558       548/558
(98 %)
8 diff
(98.6 %id)
AA926910 pooled .b 259 to 459 201 to 1       201/218
(92 %)
0 diff
(100 %id)
AI220291 pooled .b 259 to 382 126 to 3       124/136
(91 %)
0 diff
(100 %id)
BQ877284 ductal carcinoma, cell line, Pancreas .b 259 to 1160 26 to 928       903/933
(96 %)
21 diff
(97.8 %id)
BU191199 ductal carcinoma, cell line, Pancreas .b 259 to 1148 27 to 931       905/937
(96 %)
39 diff
(95.9 %id)
TI_154191245   .b 260 to 827 50 to 616       567/571
(99 %)
2 diff
(99.7 %id)
CF129527 Chondrosarcoma Lung Metastasis cell lines, lung .b 261 to 826 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
BM708417 eye, RPE and Choroid .b 268 to 560 1 to 293       293/293
(100 %)
0 diff
(100 %id)
BF222247 Prostate .b 276 to 550 275 to 1       275/275
(100 %)
1 diff
(99.7 %id)
AA970668 pooled .b 280 to 545 266 to 1       266/266
(100 %)
0 diff
(100 %id)
BP271650   .b 286 to 845 1 to 560       560/560
(100 %)
3 diff
(99.5 %id)
TI_159716854   .b 289 to 1244 999 to 54   AAA   946/1001
(94 %)
32 diff
(96.9 %id)
AA938527 2 pooled tumors (clear cell type), Kidney .b 301 to 564 268 to 4       265/268
(98 %)
0 diff
(100 %id)
AW954339   .b 304 to 442 1 to 140       140/140
(100 %)
5 diff
(96.5 %id)
AI249710 Kidney .b 318 to 568 251 to 1       251/251
(100 %)
0 diff
(100 %id)
BG002501 placenta_normal .b 320 to 716 1 to 394       394/408
(96 %)
7 diff
(98.3 %id)
FN146257 breast carcinoma .b 330 to 419 97 to 9     Submitted on the opposite strand 89/97
(91 %)
1 diff
(99.0 %id)
AA863482 pooled germ cell tumors .b 362 to 566 206 to 2       205/206
(99 %)
0 diff
(100 %id)
BQ345440 nervous_tumor .b 367 to 880 616 to 103       512/616
(83 %)
2 diff
(99.7 %id)
FN050186 breast carcinoma .b 369 to 467 99 to 1     Submitted on the opposite strand 99/99
(100 %)
0 diff
(100 %id)
N86730   .b 381 to 542 1 to 162       162/162
(100 %)
8 diff
(95.1 %id)
AJ715317 bone marrow .b 384 to 555 125 to 295       171/295
(57 %)
6 diff
(98.0 %id)
TI_149315914   .b 384 to 1240 933 to 85   AAA   849/991
(85 %)
14 diff
(98.6 %id)
AW410611 muscle, rhabdomyosarcoma .b 416 to 896 19 to 499   fully sequenced,   481/499
(96 %)
6 diff
(98.8 %id)
BI115122 muscle, rhabdomyosarcoma .b 416 to 1241 1 to 835   AAA   835/835
(100 %)
19 diff
(97.8 %id)
FN118786 breast carcinoma .b 417 to 501 1 to 85       85/86
(98 %)
1 diff
(98.9 %id)
BF991245 placenta_normal .b 427 to 531 1 to 105       105/105
(100 %)
3 diff
(97.2 %id)
BM701812 eye, optic nerve .b 456 to 809 1 to 354   fully sequenced,   354/354
(100 %)
0 diff
(100 %id)
TI_154055206   .b 464 to 1244 869 to 93   AAA   777/979
(79 %)
10 diff
(99.0 %id)
TI_149310981   .b 471 to 1240 845 to 84   AAA   762/908
(83 %)
12 diff
(98.7 %id)
BP301438   .b 501 to 1092 1 to 584       584/584
(100 %)
14 diff
(97.7 %id)
CB852558 Human Lung Epithelial cells, lung .b 523 to 1244 734 to 16   AAA   719/719
(100 %)
7 diff
(99.1 %id)
CB529110 Aveolar Macrophage, lung .b 535 to 1244 726 to 16   AAA   711/711
(100 %)
2 diff
(99.8 %id)
CB853718 Human Lung Epithelial cells, lung .b 540 to 1237 712 to 19   AAA   694/694
(100 %)
6 diff
(99.2 %id)
N51339 multiple sclerosis lesions .b 560 to 1067 1 to 508     Submitted on the opposite strand 508/508
(100 %)
3 diff
(99.5 %id)
BX376797 Neuroblastoma Cot 50-normalized .b 561 to 1004 477 to 34     Submitted on the opposite strand 444/477
(93 %)
1 diff
(99.8 %id)
AA573483 breast .b 561 to 1135 1 to 574     Submitted on the opposite strand 574/576
(99 %)
11 diff
(98.1 %id)
AI089631 uterus .b 561 to 1181 1 to 621     Submitted on the opposite strand 621/621
(100 %)
1 diff
(99.9 %id)
AI206918 pooled germ cell tumors .b 561 to 1002 1 to 441     Submitted on the opposite strand 441/441
(100 %)
3 diff
(99.4 %id)
AI458510 carcinoid, lung .b 561 to 1075 1 to 515     Submitted on the opposite strand 515/516
(99 %)
5 diff
(99.1 %id)
AI744004 Kidney .b 561 to 1136 1 to 576     Submitted on the opposite strand 576/576
(100 %)
4 diff
(99.4 %id)
AI863949 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 561 to 1003 1 to 450     Submitted on the opposite strand 450/450
(100 %)
7 diff
(98.5 %id)
AI927600 normal prostate, Prostate .b 561 to 1136 1 to 576     Submitted on the opposite strand 576/576
(100 %)
3 diff
(99.5 %id)
BE219288 carcinoid, lung .b 561 to 1119 1 to 558     Submitted on the opposite strand 558/558
(100 %)
3 diff
(99.5 %id)
BF111294 pooled .b 561 to 1136 1 to 576     Submitted on the opposite strand 576/576
(100 %)
5 diff
(99.2 %id)
BF115893 fibrotheoma, ovary .b 561 to 1136 1 to 576     Submitted on the opposite strand 576/576
(100 %)
1 diff
(99.9 %id)
TI_151745440   .b 561 to 1035 72 to 552     Submitted on the opposite strand 481/1427
(33 %)
23 diff
(98.4 %id)
TI_151713542   .b 561 to 1193 83 to 715     Submitted on the opposite strand 633/715
(88 %)
6 diff
(99.2 %id)
AA043818 uterus .b 566 to 865 1 to 304   fully sequenced,   304/304
(100 %)
6 diff
(98.1 %id)
CB053960 brain, glioblastoma (pooled) .b 570 to 1195 1 to 626     Submitted on the opposite strand 626/626
(100 %)
1 diff
(99.9 %id)
TI_1948074624   .b 570 to 1138 696 to 128   fully sequenced,   569/696
(81 %)
1 diff
(99.9 %id)
CB048791 Prostate .b 576 to 1242 1 to 667     Submitted on the opposite strand 667/667
(100 %)
1 diff
(99.9 %id)
CA427411 Cell Line, Chondrosarcoma .b 581 to 1244 676 to 16   AAA   661/661
(100 %)
13 diff
(98.1 %id)
CD365977 Alveolar Macrophage, lung .b 583 to 1241 670 to 15   AAA   656/656
(100 %)
12 diff
(98.2 %id)
N21095 melanocyte .b 584 to 1163 1 to 583     Submitted on the opposite strand 583/583
(100 %)
17 diff
(97.1 %id)
AA886986 Kidney .b 584 to 1136 1 to 553     Submitted on the opposite strand 553/553
(100 %)
1 diff
(99.9 %id)
AI583210 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 584 to 1040 1 to 457     Submitted on the opposite strand 457/457
(100 %)
1 diff
(99.8 %id)
AI693061 pooled .b 584 to 1136 1 to 553     Submitted on the opposite strand 553/553
(100 %)
2 diff
(99.7 %id)
AI660002 thymus, pooled .b 584 to 1136 1 to 553     Submitted on the opposite strand 553/553
(100 %)
2 diff
(99.7 %id)
AW028679 fibrotheoma, ovary .b 584 to 1109 1 to 526     Submitted on the opposite strand 526/526
(100 %)
16 diff
(97.0 %id)
CA308974 Alveolar Macrophage, lung .b 585 to 1241 675 to 19   AAA   657/657
(100 %)
2 diff
(99.7 %id)
CA418616 Chondrosarcoma Grade II, Left Pelvis .b 591 to 1244 672 to 19   AAA   654/654
(100 %)
0 diff
(100 %id)
CB306583 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 593 to 1240 662 to 15   AAA   648/648
(100 %)
4 diff
(99.4 %id)
CA423398 cell lines, Chondrosarcoma .b 594 to 1244 666 to 16   AAA   651/651
(100 %)
0 diff
(100 %id)
AW887620 ovary .b 600 to 981 405 to 15       391/468
(83 %)
15 diff
(96.8 %id)
FN082291 breast carcinoma .b 602 to 677 1 to 76       76/77
(98 %)
1 diff
(98.8 %id)
BF434645 fibrotheoma, ovary .b 603 to 1113 1 to 510     Submitted on the opposite strand 510/510
(100 %)
15 diff
(97.1 %id)
BU632093 cell lines, Chondrosarcoma .b 603 to 1244 656 to 16   AAA   641/651
(98 %)
1 diff
(99.9 %id)
AI921771 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 604 to 1136 1 to 533     Submitted on the opposite strand 533/533
(100 %)
7 diff
(98.7 %id)
BE670413 carcinoid, lung .b 605 to 1136 1 to 532     Submitted on the opposite strand 532/532
(100 %)
31 diff
(94.2 %id)
AA032049 uterus .b 611 to 984 1 to 376   fully sequenced,   376/376
(100 %)
4 diff
(99.0 %id)
BF590523 colon, colon tumor, RER+ .b 612 to 1124 1 to 513     Submitted on the opposite strand 513/513
(100 %)
5 diff
(99.1 %id)
W67813 heart .b 617 to 941 1 to 325     Submitted on the opposite strand 325/325
(100 %)
1 diff
(99.7 %id)
BQ015951 lung, Metastatic Chondrosarcoma .b 630 to 1241 624 to 15   AAA   610/610
(100 %)
2 diff
(99.7 %id)
FN052074 breast carcinoma .b 632 to 746 115 to 1     Submitted on the opposite strand 115/115
(100 %)
0 diff
(100 %id)
BU935350 mixed (pool of 40 RNAs) .b 634 to 1241 1 to 608       608/608
(100 %)
2 diff
(99.7 %id)
BE504210 carcinoid, lung .b 638 to 1136 32 to 532     Submitted on the opposite strand 501/532
(94 %)
7 diff
(98.7 %id)
BG167579 hypernephroma, cell line, Kidney .b 641 to 1245 1 to 606       606/1001
(60 %)
5 diff
(99.6 %id)
BQ130539.
matches multiple genes
insulinoma, Pancreas .b 642 to 1237 611 to 16   AAA also hits gene OAZ1andSPPL2B 596/596
(100 %)
0 diff
(100 %id)
BQ083192 Ascites, stomach .b 647 to 991 1 to 345       345/345
(100 %)
1 diff
(99.8 %id)
AA759351   .b 657 to 980 1 to 323     Submitted on the opposite strand 323/323
(100 %)
2 diff
(99.4 %id)
H28171 brain .b 659 to 773 1 to 115     Submitted on the opposite strand 115/115
(100 %)
0 diff
(100 %id)
DW445224 Liver .b 666 to 870 16 to 220       205/222
(92 %)
8 diff
(96.4 %id)
DW451324 Liver .b 666 to 1028 16 to 378       363/378
(96 %)
9 diff
(97.7 %id)
AI765830 2 pooled tumors (clear cell type), Kidney .b 671 to 1246 576 to 2       575/576
(99 %)
1 diff
(99.9 %id)
AA595133 Prostate, prostate tumor .b 678 to 1244 585 to 19   AAA   567/567
(100 %)
0 diff
(100 %id)
TI_1948074437   .b 678 to 1138 588 to 128   fully sequenced,   461/588
(78 %)
0 diff
(100 %id)
AW474040 lymph node, lymphoma, follicular mixed small and largecell .b 695 to 1246 554 to 4       551/627
(87 %)
9 diff
(98.6 %id)
BU689144 lung .b 701 to 1240 554 to 15   AAA   540/540
(100 %)
2 diff
(99.7 %id)
W67886 heart .b 704 to 1238 537 to 1     Submitted on the opposite strand 537/595
(90 %)
7 diff
(98.9 %id)
AI597775 adenocarcinoma, Pancreas .b 704 to 1244 541 to 1       541/546
(99 %)
4 diff
(99.3 %id)
BE826199 lung_normal .b 713 to 1147 58 to 493       436/503
(86 %)
11 diff
(97.9 %id)
FN124941 breast carcinoma .b 728 to 824 100 to 4     Submitted on the opposite strand 97/100
(97 %)
0 diff
(100 %id)
BG943913 blood .b 730 to 1237 548 to 41   AAA   508/508
(100 %)
2 diff
(99.7 %id)
FN119409 breast carcinoma .b 731 to 825 95 to 1     Submitted on the opposite strand 95/99
(95 %)
0 diff
(100 %id)
AA857357 pharynx, squamous cell carcinoma .b 732 to 1134 403 to 1       403/403
(100 %)
14 diff
(96.6 %id)
DW450789 Liver .b 735 to 907 17 to 189       173/196
(88 %)
7 diff
(96.5 %id)
FN116568 breast carcinoma .b 735 to 833 1 to 98       98/98
(100 %)
3 diff
(97.0 %id)
BM694120 eye, RPE and Choroid .b 736 to 1236 501 to 1     Submitted on the opposite strand 501/501
(100 %)
1 diff
(99.9 %id)
FN164978 breast carcinoma .b 737 to 788 1 to 52       52/53
(98 %)
1 diff
(98.2 %id)
BM704925 eye, RPE and Choroid .b 741 to 1241 529 to 29   AAA Submitted on the opposite strand 501/501
(100 %)
1 diff
(99.9 %id)
CB053961 brain, glioblastoma (pooled) .b 745 to 1241 523 to 27   AAA Submitted on the opposite strand 497/497
(100 %)
3 diff
(99.4 %id)
FN050477 breast carcinoma .b 750 to 848 1 to 99       99/99
(100 %)
1 diff
(99.0 %id)
BM967286 Islets of Langerhans, Pancreas .b 750 to 1237 8 to 495   fully sequenced, AAA   488/495
(98 %)
7 diff
(98.6 %id)
CB048792 Prostate .b 766 to 1246 497 to 17   tiling clone, Submitted on the opposite strand 481/497
(96 %)
1 diff
(99.8 %id)
N31107 melanocyte .b 768 to 1238 473 to 1     Submitted on the opposite strand 473/473
(100 %)
2 diff
(99.6 %id)
BM055307 Islets of Langerhans, Pancreas .b 768 to 1055 1 to 288   fully sequenced,   288/288
(100 %)
1 diff
(99.7 %id)
BM055354 Islets of Langerhans, Pancreas .b 768 to 1053 1 to 286   fully sequenced,   286/286
(100 %)
1 diff
(99.7 %id)
DB550391 hippocampus .b 773 to 1241 1 to 469     Submitted on the opposite strand 469/470
(99 %)
1 diff
(99.8 %id)
DB573318 hypothalamus .b 773 to 1242 1 to 470     Submitted on the opposite strand 470/471
(99 %)
2 diff
(99.6 %id)
BQ000423 Fibrosarcoma .b 778 to 1241 478 to 15   AAA   464/499
(92 %)
4 diff
(99.2 %id)
TI_1948074998   .b 779 to 1138 486 to 127   fully sequenced,   360/486
(74 %)
1 diff
(99.8 %id)
BU729020 eye, optic nerve .b 779 to 1244 482 to 16   fully sequenced, AAA   467/467
(100 %)
1 diff
(99.8 %id)
DB565786 hypothalamus .b 786 to 1244 1 to 459     Submitted on the opposite strand 459/459
(100 %)
1 diff
(99.8 %id)
DB563840 hypothalamus .b 789 to 1244 1 to 457     Submitted on the opposite strand 457/457
(100 %)
4 diff
(99.2 %id)
DB566579 hypothalamus .b 797 to 1244 1 to 448     Submitted on the opposite strand 448/448
(100 %)
1 diff
(99.8 %id)
DB531548 hippocampus .b 799 to 1241 1 to 442     Submitted on the opposite strand 442/442
(100 %)
2 diff
(99.6 %id)
FN062377 breast carcinoma .b 802 to 874 1 to 73       73/74
(98 %)
1 diff
(98.7 %id)
DB512245 testis .b 810 to 1244 1 to 430     Submitted on the opposite strand 430/430
(100 %)
17 diff
(96.1 %id)
CA308671 Alveolar Macrophage, lung .b 812 to 1241 445 to 16   AAA   430/430
(100 %)
8 diff
(98.2 %id)
DB537585 hippocampus .b 820 to 1241 1 to 423     Submitted on the opposite strand 423/423
(100 %)
9 diff
(97.9 %id)
DB564035 hypothalamus .b 828 to 1242 1 to 417     Submitted on the opposite strand 417/418
(99 %)
3 diff
(99.3 %id)
DB561098 hypothalamus .b 830 to 1244 1 to 415     Submitted on the opposite strand 415/415
(100 %)
1 diff
(99.8 %id)
D51072   .b 833 to 1233 397 to 1       397/401
(99 %)
3 diff
(99.3 %id)
AA043933 uterus .b 835 to 1241 409 to 1   fully sequenced,   409/409
(100 %)
3 diff
(99.3 %id)
FN158136 breast carcinoma .b 845 to 953 107 to 1     Submitted on the opposite strand 107/107
(100 %)
2 diff
(98.2 %id)
AW410612 muscle, rhabdomyosarcoma .b 850 to 1241 410 to 19   fully sequenced, AAA   392/392
(100 %)
2 diff
(99.5 %id)
AW270835 Kidney .b 857 to 1246 392 to 3       390/392
(99 %)
0 diff
(100 %id)
AA031931 uterus .b 954 to 1250 297 to 1   fully sequenced,   297/297
(100 %)
4 diff
(98.7 %id)
BM055070 Islets of Langerhans, Pancreas .b 1023 to 1242 220 to 1   fully sequenced,   220/220
(100 %)
2 diff
(99.1 %id)
BM055028 Islets of Langerhans, Pancreas .b 1025 to 1242 218 to 1   fully sequenced,   218/218
(100 %)
3 diff
(98.7 %id)
BM893943 Islets of Langerhans, Pancreas .b 1044 to 1242 199 to 1   fully sequenced,   199/199
(100 %)
0 diff
(100 %id)
BG536381 lung .c 1 to 699 5 to 702 I40M G41A F42S V43C S44R ... tiling clone,   702/703
(99 %)
5 diff
(99.3 %id)
AI566234 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 78 to 360 283 to 1   tiling clone,   283/283
(100 %)
1 diff
(99.7 %id)
DB285622 uterus .d 1 to 502 2 to 504 A3T R28X N29E P30S H31T ... tiling clone, capped   503/503
(100 %)
3 diff
(99.5 %id)
DA019607   .e 1 to 566 2 to 567 A3T tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
AA018053 eye, retina .e 24 to 419 1 to 405       405/415
(97 %)
18 diff
(95.7 %id)
BX096314 eye, retina .e 26 to 776 1 to 751 A3T E67X tiling clone,   751/751
(100 %)
2 diff
(99.8 %id)
BI521625 pooled pancreas and spleen .e 317 to 951 59 to 693   tiling clone,   635/693
(91 %)
8 diff
(98.9 %id)
BI521885 pooled pancreas and spleen .e 970 to 1701 731 to 1   tiling clone,   731/731
(100 %)
3 diff
(99.6 %id)
AW450883   .e 1180 to 1708 529 to 1       529/529
(100 %)
5 diff
(99.1 %id)
AI221664 pooled .e 1237 to 1709 473 to 1   tiling clone,   473/473
(100 %)
0 diff
(100 %id)
AA018054 eye, retina .e 1345 to 1635 292 to 1       292/298
(97 %)
1 diff
(99.7 %id)
EL593743 epidermis, skin .f 1 to 324 354 to 31 L3R D4V tiling clone, Submitted on the opposite strand 324/366
(88 %)
3 diff
(99.2 %id)
TI_158434285   .g 1 to 624 651 to 25 A3T tiling clone,   627/1021
(61 %)
24 diff
(97.7 %id)
TI_151706060   .h 1 to 313 355 to 43 P2H R4G tiling clone,   313/985
(31 %)
3 diff
(99.7 %id)
CD705048 normal nasopharynx .i 1 to 443 5 to 453 A3T E6* tiling clone,   449/453
(99 %)
14 diff
(97.0 %id)
BX647539 retina .j 1 to 4907 1 to 4908 A14E tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 4908/4908
(100 %)
23 diff
(99.6 %id)
BX400345   .k-u 1 to 829 3 to 832 N25K A31T tiling clone,   832/832
(100 %)
14 diff
(98.4 %id)
N28214   .l-u 1 to 330 330 to 1 D30G tiling clone,   330/330
(100 %)
2 diff
(99.4 %id)
AW029481 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .l-u 43 to 427 415 to 30   AAA   386/386
(100 %)
18 diff
(95.4 %id)
AA628319   .l-u 62 to 157 8 to 103     Submitted on the opposite strand 96/103
(93 %)
6 diff
(94.2 %id)
AI522038 Kidney .l-u 68 to 429 367 to 6   tiling clone,   362/368
(98 %)
0 diff
(100 %id)
BF821259 kidney_tumor .l-u 72 to 173 1 to 102       102/125
(81 %)
6 diff
(95.2 %id)
BF900661 marrow .l-u 72 to 173 1 to 102       102/125
(81 %)
6 diff
(95.2 %id)
FN176823 breast carcinoma .l-u 81 to 193 1 to 112       112/114
(98 %)
2 diff
(98.3 %id)
D51504   .l-u 84 to 415 338 to 7       332/338
(98 %)
0 diff
(100 %id)
AA728848 alveolar rhabdomyosarcoma .l-u 104 to 429 1 to 326       326/335
(97 %)
1 diff
(99.8 %id)
FN121078 breast carcinoma .l-u 106 to 211 1 to 103       103/103
(100 %)
3 diff
(97.1 %id)
AA192524   .l-u 116 to 426 39 to 348       310/349
(88 %)
6 diff
(98.3 %id)
AA746687 alveolar rhabdomyosarcoma .l-u 119 to 422 1 to 304       304/308
(98 %)
2 diff
(99.4 %id)
M85837   .l-u 121 to 398 278 to 1       278/279
(99 %)
3 diff
(99.0 %id)
FN091308 breast carcinoma .l-u 165 to 266 1 to 102       102/102
(100 %)
2 diff
(98.1 %id)
BF087584 head_neck .l-u 168 to 286 1 to 116       116/118
(98 %)
13 diff
(89.0 %id)
BF001184 Prostate .l-u 170 to 427 270 to 13   AAA   258/258
(100 %)
1 diff
(99.7 %id)
AI478194 Kidney .l-u 177 to 427 251 to 1       251/251
(100 %)
0 diff
(100 %id)
AA730830 Ewing's sarcoma .l-u 181 to 317 137 to 1       137/148
(92 %)
9 diff
(94.0 %id)
C01830   .l-u 191 to 427 1 to 237       237/237
(100 %)
0 diff
(100 %id)
FN164217 breast carcinoma .l-u 194 to 296 1 to 107       107/107
(100 %)
5 diff
(95.4 %id)
EC501577 Prostate .l-u 214 to 310 1 to 96       96/97
(98 %)
3 diff
(97.0 %id)
EC543489 Prostate .l-u 214 to 304 1 to 93       93/95
(97 %)
3 diff
(96.9 %id)
EC528051 Prostate .l-u 215 to 307 1 to 96       96/96
(100 %)
3 diff
(96.9 %id)
AA506016 breast .l-u 229 to 427 199 to 1       199/199
(100 %)
0 diff
(100 %id)
BI850661 normal squamous epithelium, floor of mouth .l-u 239 to 427 189 to 1       189/216
(87 %)
2 diff
(99.1 %id)
EC439615 Prostate .l-u 262 to 360 1 to 99       99/99
(100 %)
4 diff
(96.0 %id)
BQ305256 breast .l-u 268 to 429 1 to 157       157/164
(95 %)
11 diff
(93.3 %id)
EC499680 Prostate .l-u 275 to 375 1 to 101       101/101
(100 %)
6 diff
(94.1 %id)
EC459559 Prostate .l-u 281 to 368 6 to 91       86/94
(91 %)
4 diff
(95.8 %id)
EC471340 Prostate .l-u 286 to 372 16 to 103       88/103
(85 %)
6 diff
(94.2 %id)
FN060260 breast carcinoma .l-u 297 to 394 1 to 98       98/98
(100 %)
0 diff
(100 %id)
FN150474 breast carcinoma .l-u 318 to 414 1 to 95       95/98
(96 %)
7 diff
(92.9 %id)
FN083774 breast carcinoma .l-u 322 to 382 61 to 1     Submitted on the opposite strand 61/62
(98 %)
0 diff
(100 %id)
FN086894 breast carcinoma .l-u 334 to 420 1 to 87       87/87
(100 %)
1 diff
(98.9 %id)
BX349113   Gene BLVRA, variant not shown         This clone was ignored    
BG527571 lung, mucoepidermoid carcinoma Gene BLVRA, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC