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Gene BICD1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
221 supporting clones for gene BICD1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AI816088 brain, frontal lobe .a 1 to 373 2 to 383   tiling clone,   383/383
(100 %)
4 diff
(99.0 %id)
DA502924 brain .a 1 to 383 2 to 392   capped   391/391
(100 %)
3 diff
(99.3 %id)
AU132680   .a 9 to 698 2 to 698   capped   697/697
(100 %)
5 diff
(99.3 %id)
DA724010   .a 12 to 554 2 to 562   capped   561/561
(100 %)
13 diff
(97.7 %id)
BE276307 melanotic melanoma, skin .a 15 to 632 1 to 633   available from MGC,   633/825
(76 %)
13 diff
(98.5 %id)
DB466377 hippocampus .a 36 to 382 1 to 347       347/716
(48 %)
7 diff
(99.1 %id)
DA106212 cerebellum .a 37 to 596 2 to 561   tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
DA372633 thalamus .a 37 to 584 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA375454 thalamus .a 37 to 574 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
BG477829 melanotic melanoma, skin .a 46 to 713 1 to 680       680/742
(91 %)
42 diff
(94.4 %id)
BE742576 adenocarcinoma cell line, ovary .a 92 to 653 1 to 563       563/974
(57 %)
9 diff
(99.1 %id)
AK290188 thalamus .a 390 to 3669 1 to 3280 exact tiling clone,   3280/3281
(99 %)
2 diff
(100.0 %id)
DA405317 thalamus .a 391 to 947 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA501226 brain .a 407 to 962 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
TI_1971556425   .a 409 to 1502 44 to 1135       1092/1296
(84 %)
14 diff
(99.0 %id)
TI_1971556441   .a 409 to 1502 43 to 1130       1088/1272
(85 %)
18 diff
(98.6 %id)
TI_1971556449   .a 409 to 1502 44 to 1135       1092/1283
(85 %)
12 diff
(99.1 %id)
TI_1971556451   .a 409 to 1500 45 to 1132       1088/1287
(84 %)
13 diff
(99.0 %id)
TI_1971556453   .a 409 to 1504 44 to 1132       1089/1251
(87 %)
23 diff
(98.2 %id)
TI_1971556455   .a 409 to 1502 43 to 1128       1086/1269
(85 %)
20 diff
(98.5 %id)
TI_1971556463   .a 409 to 1502 45 to 1131       1087/1283
(84 %)
17 diff
(98.7 %id)
TI_2016730897   .a 409 to 1291 131 to 1016     Submitted on the opposite strand 886/1018
(87 %)
23 diff
(97.8 %id)
NM_001714.2   .a 412 to 4000 1 to 3589 exact RefSeq,   3589/3589
(100 %)
0 diff
(100 %id)
U90028   .a 412 to 3670 1 to 3257 A588P A746T tiling clone,   3257/3257
(100 %)
4 diff
(99.9 %id)
BP281985 bone marrow .a 429 to 1016 1 to 586       586/587
(99 %)
6 diff
(99.0 %id)
BX488093   .a 496 to 1140 1 to 646       646/646
(100 %)
4 diff
(99.4 %id)
CN260873 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 502 to 1118 1 to 617       617/617
(100 %)
0 diff
(100 %id)
AI816129 brain, frontal lobe .a 634 to 1211 579 to 2       578/579
(99 %)
1 diff
(99.9 %id)
AU154168   .a 2104 to 2622 520 to 1       520/520
(100 %)
4 diff
(99.3 %id)
BF573024 melanotic melanoma, high MDR, skin .a 2546 to 3100 1 to 568       568/716
(79 %)
36 diff
(95.0 %id)
R35056 placenta .a 3097 to 3334 1 to 240       240/321
(74 %)
8 diff
(97.6 %id)
BQ025206 placenta .a 3099 to 3670 590 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 572/590
(96 %)
1 diff
(99.9 %id)
BC136372 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .b 1 to 3194 1 to 3194 exact tiling clone,   3194/3194
(100 %)
0 diff
(100 %id)
TI_2016730563   .b 2008 to 3194 1224 to 56     Submitted on the opposite strand 1169/1280
(91 %)
27 diff
(97.9 %id)
TI_2016730821   .b 2070 to 3194 1199 to 61     Submitted on the opposite strand 1135/1199
(94 %)
27 diff
(97.8 %id)
TI_2016731069   .b 2102 to 3161 1 to 1072       1072/1141
(93 %)
20 diff
(98.3 %id)
AK313430 cerebellum .c 1 to 2805 1 to 2805 T778A tiling clone,   2805/2805
(100 %)
2 diff
(100.0 %id)
DA123884 cerebellum .c 2 to 558 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
AA366409 Pancreas .c 21 to 265 1 to 245       245/245
(100 %)
0 diff
(100 %id)
DN993545 brain, whole brain .c 28 to 751 8 to 730       723/730
(99 %)
7 diff
(99.1 %id)
NM_001003398.1   .c 101 to 3385 1 to 3285 exact RefSeq,   3285/3285
(100 %)
0 diff
(100 %id)
DA738944   .c 101 to 597 2 to 499   capped   498/498
(100 %)
1 diff
(99.8 %id)
CN260874 embryonic stem cells, cell lines H1, H7, andH9 .c 246 to 501 1 to 256       256/256
(100 %)
0 diff
(100 %id)
BU785251 Pancreas, Purified pancreatic islet .c 384 to 1036 1 to 653       653/653
(100 %)
0 diff
(100 %id)
CA778283 Pancreas, Purified pancreatic islet .c 393 to 1184 23 to 814       792/814
(97 %)
6 diff
(99.3 %id)
TI_2194645437   .c 395 to 1189 338 to 1121       784/1274
(61 %)
52 diff
(96.0 %id)
CK902848 Pancreas, Purified pancreatic islet .c 413 to 995 1 to 583     Submitted on the opposite strand 583/583
(100 %)
0 diff
(100 %id)
FN073101 breast carcinoma .c 480 to 528 1 to 49       49/50
(98 %)
1 diff
(98.0 %id)
CD652549 Embryonic Stem cells .c 571 to 1326 12 to 768       757/822
(92 %)
3 diff
(99.7 %id)
AL709131 human skeletal muscle .c 693 to 1225 1 to 533       533/533
(100 %)
0 diff
(100 %id)
DA773282 brain .c 754 to 1318 11 to 575   capped   565/574
(98 %)
6 diff
(99.0 %id)
TI_2016731067   .c 813 to 1976 8 to 1164       1157/1205
(96 %)
57 diff
(95.3 %id)
BE932636 head_neck .c 820 to 1114 297 to 2       296/297
(99 %)
0 diff
(100 %id)
CN260875 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 971 to 1256 1 to 286       286/286
(100 %)
4 diff
(98.7 %id)
BI758577 brain .c 1018 to 1919 32 to 928       897/986
(90 %)
29 diff
(97.1 %id)
TI_57215485   .c 1018 to 1919 32 to 928       897/986
(90 %)
29 diff
(97.1 %id)
BE745650 adenocarcinoma cell line, ovary .c 1164 to 1444 1 to 281       281/281
(100 %)
6 diff
(97.9 %id)
AA471320   .c 1195 to 1528 1 to 334       334/334
(100 %)
5 diff
(98.6 %id)
BM044383 carcinoma, cell line, Prostate .c 1204 to 2032 1 to 843       843/865
(97 %)
42 diff
(95.2 %id)
BI030455 marrow .c 1210 to 1812 10 to 613       604/613
(98 %)
6 diff
(99.1 %id)
BI007335 kidney_tumor .c 1217 to 1838 1 to 622       622/622
(100 %)
1 diff
(99.9 %id)
TI_2016731065   .c 1254 to 2411 1 to 1156       1156/1317
(87 %)
26 diff
(98.1 %id)
BF170038 blood .c 1411 to 1731 1 to 329       329/329
(100 %)
22 diff
(93.4 %id)
BF175612 blood .c 1498 to 1825 1 to 328       328/328
(100 %)
1 diff
(99.7 %id)
DA275758 corpus callosum .c 1513 to 2069 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BX098300 eye, retina .c 1522 to 2273 1 to 752       752/752
(100 %)
1 diff
(99.9 %id)
AA179206   .c 1624 to 2129 1 to 503       503/505
(99 %)
7 diff
(98.7 %id)
AA249429   .c 1740 to 2008 1 to 261       261/261
(100 %)
8 diff
(97.0 %id)
BP350376 brain .c 1763 to 2339 1 to 577       577/581
(99 %)
5 diff
(99.2 %id)
BF959881 nervous_normal .c 1777 to 2256 13 to 493       481/493
(97 %)
6 diff
(98.8 %id)
BF961680 nervous_normal .c 1777 to 1888 22 to 132       111/133
(83 %)
3 diff
(97.8 %id)
AA287686 germinal center B cell .c 1842 to 2431 1 to 589       589/589
(100 %)
13 diff
(97.8 %id)
AI640238 Kidney .c 1847 to 2325 479 to 2   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 478/573
(83 %)
0 diff
(100 %id)
BE772693 prostate_tumor .c 2012 to 2457 445 to 1       445/445
(100 %)
1 diff
(99.8 %id)
BM722330 eye, fetal eye .c 2051 to 2592 91 to 633   tiling clone, fully sequenced, Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 543/633
(85 %)
7 diff
(98.9 %id)
BF931655 nervous_tumor .c 2227 to 2399 179 to 7     Submitted on the opposite strand 173/179
(96 %)
0 diff
(100 %id)
CA777994 Pancreas, Purified pancreatic islet .c 2279 to 3055 777 to 1       777/777
(100 %)
1 diff
(99.9 %id)
BU784990 Pancreas, Purified pancreatic islet .c 2426 to 3054 629 to 1   tiling clone,   629/629
(100 %)
0 diff
(100 %id)
BF111243 carcinoid, lung .c 2498 to 3059 562 to 1       562/562
(100 %)
16 diff
(97.2 %id)
AA179207   .c 2553 to 3057 501 to 1       501/501
(100 %)
7 diff
(98.7 %id)
BU740168 eye, fetal eye .c 2582 to 3055 492 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 474/474
(100 %)
0 diff
(100 %id)
AW052002 pooled .c 2634 to 3053 421 to 2       420/570
(73 %)
6 diff
(99.0 %id)
W27103 eye, retina .c 2640 to 3039 420 to 19       402/625
(64 %)
3 diff
(99.6 %id)
AW779269 pooled .c 2642 to 3054 419 to 1       419/486
(86 %)
8 diff
(98.4 %id)
AA737481 germinal center B cell .c 2653 to 3055 414 to 11   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 404/404
(100 %)
3 diff
(99.3 %id)
TI_2016727127   .c 2678 to 3110 480 to 49     Submitted on the opposite strand 432/482
(89 %)
1 diff
(99.8 %id)
AA992635   .c 2725 to 3059 334 to 1       334/334
(100 %)
1 diff
(99.8 %id)
AA909172 pooled .c 2790 to 3055 285 to 20   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 266/266
(100 %)
0 diff
(100 %id)
AA494228 thyroid .c 2807 to 3055 297 to 49   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 249/249
(100 %)
1 diff
(99.6 %id)
CF136932 lymph .c 2811 to 3070 279 to 19     Submitted on the opposite strand 261/279
(93 %)
0 diff
(100 %id)
AA828043 ovary .c 2835 to 3055 238 to 18   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 221/228
(96 %)
1 diff
(99.6 %id)
AA826136 ovary .c 2835 to 3062 229 to 1       229/236
(97 %)
2 diff
(99.2 %id)
AA193252 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 2875 to 3049 174 to 1     Submitted on the opposite strand 174/192
(90 %)
2 diff
(99.0 %id)
AA902456 pooled germ cell tumors .c 2883 to 3349 467 to 1       467/467
(100 %)
0 diff
(100 %id)
AW888898 nervous_tumor .c 2937 to 3100 9 to 169       161/172
(93 %)
8 diff
(95.4 %id)
AI207194 pooled germ cell tumors .c 2976 to 3385 410 to 1   tiling clone,   410/410
(100 %)
1 diff
(99.8 %id)
FN123301 breast carcinoma .c 2982 to 3055 76 to 2     Submitted on the opposite strand 75/76
(98 %)
0 diff
(100 %id)
H83373 eye, retina .d 1 to 354 1 to 357   tiling clone,   357/357
(100 %)
3 diff
(99.2 %id)
AA018189 eye, retina .d 1 to 435 1 to 448   tiling clone,   448/483
(92 %)
16 diff
(96.7 %id)
AA207154   .d 244 to 867 1 to 617   tiling clone,   617/627
(98 %)
24 diff
(96.2 %id)
U90030   .d 761 to 1574 1 to 813   tiling clone,   813/813
(100 %)
5 diff
(99.4 %id)
BU940319 mixed (pool of 40 RNAs) .d 899 to 1671 1 to 777       777/777
(100 %)
15 diff
(98.1 %id)
BM823450 Ascites, stomach .d 930 to 1499 1 to 570   tiling clone,   570/570
(100 %)
1 diff
(99.9 %id)
AW662826 pooled .d 1031 to 1576 547 to 2       546/547
(99 %)
0 diff
(100 %id)
AW631184 pooled .d 1049 to 1576 529 to 2       528/529
(99 %)
0 diff
(100 %id)
AW978149   .d 1058 to 1574 520 to 1     Submitted on the opposite strand 520/520
(100 %)
22 diff
(95.8 %id)
U25949   .d 1071 to 1376 308 to 3       306/308
(99 %)
0 diff
(100 %id)
AA813939 germinal center B cell .d 1085 to 1574 501 to 13   AAA   489/489
(100 %)
5 diff
(99.0 %id)
CA442293 Fibrosarcoma .d 1171 to 1955 799 to 17   AAA   783/783
(100 %)
7 diff
(99.2 %id)
H27923 breast .d 1187 to 1505 4 to 322       319/322
(99 %)
6 diff
(98.2 %id)
AW449963   .d 1267 to 1574 325 to 18   AAA   308/308
(100 %)
3 diff
(99.1 %id)
AI431653 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1441 to 1956 516 to 1   tiling clone,   516/516
(100 %)
0 diff
(100 %id)
AI423443 brain, glioblastoma (pooled) .d 1459 to 1950 492 to 1       492/492
(100 %)
0 diff
(100 %id)
AW972796   .d 1477 to 2066 708 to 120     Submitted on the opposite strand 589/708
(83 %)
0 diff
(100 %id)
AA206330   .d 1538 to 1937 399 to 1       399/399
(100 %)
5 diff
(98.8 %id)
AA526090 ovary .d 1588 to 2058 473 to 1       473/473
(100 %)
11 diff
(97.7 %id)
AI633776 pooled germ cell tumors .d 1676 to 2057 382 to 1       382/382
(100 %)
0 diff
(100 %id)
AI305269 carcinoid, lung .d 1747 to 2168 422 to 1   tiling clone,   422/422
(100 %)
0 diff
(100 %id)
AA018216 eye, retina .d 1767 to 2167 407 to 1       407/410
(99 %)
9 diff
(97.9 %id)
H83374 eye, retina .d 1861 to 2149 291 to 1       291/301
(96 %)
4 diff
(98.7 %id)
CN260872 embryonic stem cells, DMSO-treated H9 cellline .e 1 to 727 4 to 730 D2R tiling clone,   727/730
(99 %)
6 diff
(99.2 %id)
AI300563 2 pooled tumors (clear cell type), Kidney .f 1 to 518 1 to 518 exact tiling clone, Submitted on the opposite strand 518/518
(100 %)
3 diff
(99.5 %id)
DB194301 ovary, tumor tissue .g 1 to 567 2 to 568 V136F tiling clone, capped   567/567
(100 %)
4 diff
(99.3 %id)
U25933   .h 1 to 413 413 to 1 exact tiling clone,   413/413
(100 %)
0 diff
(100 %id)
AK095648 brain .i 1 to 3449 1 to 3449 exact tiling clone, available from FLJ,   3449/3449
(100 %)
5 diff
(99.9 %id)
DA508867 brain .i 2 to 565 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
CD653789 Embryonic Stem cells .i 657 to 1440 12 to 793   tiling clone,   782/849
(92 %)
15 diff
(98.3 %id)
BE219526 carcinoid, lung .i 761 to 1250 492 to 3       490/492
(99 %)
0 diff
(100 %id)
DA162466 amygdala .i 835 to 1404 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
AI985327 Kidney .i 841 to 1250 411 to 2       410/411
(99 %)
0 diff
(100 %id)
CR737539 uterus .i 911 to 1645 735 to 1     Submitted on the opposite strand 735/740
(99 %)
3 diff
(99.6 %id)
AI129740 uterus .i 922 to 1399 1 to 478     Submitted on the opposite strand 478/478
(100 %)
2 diff
(99.6 %id)
AA040619 uterus .i 926 to 1333 1 to 408     Submitted on the opposite strand 408/411
(99 %)
6 diff
(98.6 %id)
AI129742 uterus .i 926 to 1242 1 to 317     Submitted on the opposite strand 317/317
(100 %)
5 diff
(98.5 %id)
AI128148 uterus .i 926 to 1393 1 to 468     Submitted on the opposite strand 468/468
(100 %)
2 diff
(99.6 %id)
DA506771 brain .i 928 to 1495 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
AA040618 uterus .i 1193 to 1626 436 to 1     Submitted on the opposite strand 436/436
(100 %)
4 diff
(99.1 %id)
DA428350 colon .i 1511 to 2073 2 to 565   tiling clone, capped   564/569
(99 %)
3 diff
(99.5 %id)
CD657573 Embryonic Stem cells .i 1931 to 2674 12 to 752   tiling clone,   741/838
(88 %)
9 diff
(99.0 %id)
DA103789 cerebellum .i 2528 to 3063 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
T07058   .i 2691 to 3013 1 to 327       327/327
(100 %)
7 diff
(97.9 %id)
BE221269 malignant melanoma, metastatic to lymphnode, skin .i 2743 to 3181 439 to 1       439/439
(100 %)
0 diff
(100 %id)
DA101535 cerebellum .i 2830 to 3415 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DB144777 thymus .i 2855 to 3393 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
DB316226 brain .i 2909 to 3449 543 to 1       543/543
(100 %)
2 diff
(99.7 %id)
DB302221 amygdala .i 2916 to 3449 535 to 1       535/535
(100 %)
1 diff
(99.9 %id)
DB313012 colon .i 3051 to 3449 403 to 1       403/410
(98 %)
5 diff
(98.8 %id)
AI580257 ovary, tumor, 5 pooled (see description) .j 1 to 415 415 to 1 L2S tiling clone,   415/423
(98 %)
1 diff
(99.8 %id)
DA825434 pericardium .k 1 to 542 2 to 543 exact tiling clone, capped   542/542
(100 %)
0 diff
(100 %id)
BI087536 cervix .l 1 to 646 1 to 653 exact tiling clone,   653/653
(100 %)
9 diff
(98.7 %id)
DB533158 hippocampus .l 219 to 935 1 to 716   tiling clone, Submitted on the opposite strand 716/716
(100 %)
6 diff
(99.2 %id)
BE896939 melanotic melanoma, skin .l 233 to 765 1 to 528   AAA   528/528
(100 %)
7 diff
(98.7 %id)
DR033727 brain, Right frontal lobe .l 307 to 903 13 to 609       597/609
(98 %)
6 diff
(99.1 %id)
DA751466   .m-u 1 to 553 2 to 563   tiling clone, capped   562/562
(100 %)
4 diff
(99.3 %id)
DB033486 testis .m-u 46 to 614 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA706691   .m-u 83 to 598 2 to 526   capped   525/525
(100 %)
5 diff
(99.1 %id)
DA889417   .m-u 89 to 648 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA726747   .m-u 112 to 580 2 to 479   capped   478/478
(100 %)
4 diff
(99.2 %id)
BC010091 Skin, melanotic melanoma. .m-u 144 to 2103 1 to 1968   tiling clone, available from MGC, AAA   1968/1968
(100 %)
7 diff
(99.7 %id)
DA679027   .m-u 150 to 715 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA325738 hippocampus .m-u 157 to 721 2 to 572   capped   571/571
(100 %)
6 diff
(99.0 %id)
DA371372 thalamus .m-u 157 to 706 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA372027 thalamus .m-u 157 to 625 2 to 470   capped   469/469
(100 %)
0 diff
(100 %id)
DA484977 brain .m-u 157 to 708 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
DA494898 brain .m-u 157 to 725 2 to 578   capped   577/577
(100 %)
5 diff
(99.2 %id)
DA579177   .m-u 157 to 676 2 to 529   capped   528/528
(100 %)
3 diff
(99.5 %id)
DA609503   .m-u 157 to 598 2 to 443   capped   442/442
(100 %)
1 diff
(99.8 %id)
DA682813   .m-u 157 to 940 2 to 801 E56X E71R V72G S73E C74F ... capped   800/802
(99 %)
11 diff
(98.7 %id)
DA770773 brain .m-u 157 to 725 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
DA807908 brain .m-u 157 to 754 2 to 599   tiling clone, capped   598/598
(100 %)
0 diff
(100 %id)
DA884844   .m-u 157 to 706 2 to 551   capped   550/550
(100 %)
3 diff
(99.5 %id)
DA885867   .m-u 157 to 709 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA811994 ovary, tumor tissue .m-u 158 to 702 2 to 556   capped   555/560
(99 %)
13 diff
(97.7 %id)
DA026979   .m-u 159 to 720 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA030394   .m-u 160 to 731 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA115843 cerebellum .m-u 160 to 725 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA480941   .m-u 160 to 719 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA262098 caudate nucleus .m-u 165 to 625 2 to 470   capped   469/469
(100 %)
3 diff
(99.4 %id)
AW960051   .m-u 481 to 1027 1 to 547 V10E E16D K22Q E56D Y59C ...     547/547
(100 %)
23 diff
(95.8 %id)
BF244830 brain, glioblastoma .m-u 972 to 1634 1 to 662       662/832
(79 %)
31 diff
(96.3 %id)
BF219383 brain, glioblastoma .m-u 987 to 1637 1 to 650   tiling clone,   650/650
(100 %)
20 diff
(97.0 %id)
BX480252   .m-u 1520 to 2013 1 to 494       494/494
(100 %)
7 diff
(98.6 %id)
BE501293 pooled germ cell tumors .m-u 1533 to 2099 567 to 1   tiling clone,   567/567
(100 %)
4 diff
(99.3 %id)
DB337240 testis .m-u 1546 to 2094 550 to 1       550/550
(100 %)
5 diff
(99.1 %id)
DB324002   .m-u 1560 to 2103 545 to 1       545/545
(100 %)
5 diff
(99.1 %id)
DB371261 ovary, tumor tissue .m-u 1593 to 2115 525 to 1   tiling clone,   525/525
(100 %)
15 diff
(97.2 %id)
DB322624   .m-u 1629 to 2115 488 to 1       488/489
(99 %)
4 diff
(99.2 %id)
BE182097 head_neck .n-u 1 to 221 232 to 12     Submitted on the opposite strand 221/242
(91 %)
0 diff
(100 %id)
BE182099 head_neck .n-u 1 to 240 241 to 2     Submitted on the opposite strand 240/251
(95 %)
0 diff
(100 %id)
BE182100 head_neck .n-u 1 to 248 245 to 2     Submitted on the opposite strand 244/255
(95 %)
0 diff
(100 %id)
BE182102 head_neck .n-u 1 to 221 222 to 1     Submitted on the opposite strand 222/232
(95 %)
3 diff
(98.8 %id)
BE182108 head_neck .n-u 1 to 242 242 to 1   tiling clone, Submitted on the opposite strand 242/252
(96 %)
0 diff
(100 %id)
BE182112 head_neck .n-u 1 to 248 247 to 2     Submitted on the opposite strand 246/257
(95 %)
0 diff
(100 %id)
BE182114 head_neck .n-u 1 to 248 257 to 13     Submitted on the opposite strand 245/267
(91 %)
7 diff
(97.4 %id)
T81533 liver and spleen .n-u 64 to 275 1 to 212       212/212
(100 %)
0 diff
(100 %id)
T84969 liver and spleen .n-u 64 to 464 1 to 414 exact     414/415
(99 %)
15 diff
(96.4 %id)
T95151 liver and spleen .n-u 64 to 418 1 to 364 exact     364/445
(81 %)
11 diff
(97.6 %id)
BX096987 liver and spleen .n-u 65 to 825 1 to 770 exact     770/778
(98 %)
12 diff
(98.5 %id)
CR736427 liver and spleen .n-u 65 to 770 1 to 706 exact tiling clone,   706/706
(100 %)
1 diff
(99.9 %id)
AA130913 colon, tumor .n-u 113 to 638 1 to 532 A32G     532/532
(100 %)
12 diff
(97.8 %id)
AW968260   .n-u 226 to 668 35 to 477 exact     443/479
(92 %)
6 diff
(98.8 %id)
AA258851 germinal center B cell .n-u 226 to 653 1 to 428 exact     428/428
(100 %)
0 diff
(100 %id)
CA429465 Cell Line, Chondrosarcoma .n-u 238 to 736 80 to 578   AAA Submitted on the opposite strand 499/578
(86 %)
6 diff
(99.0 %id)
AW023999.
matches multiple genes
cochlea, ear, Prostate .n-u 428 to 770 1 to 343     also hits gene konybu 343/343
(100 %)
5 diff
(98.6 %id)
T95054 liver and spleen .n-u 588 to 993 420 to 8       413/426
(96 %)
0 diff
(100 %id)
T81358 liver and spleen .n-u 743 to 993 258 to 8       251/259
(96 %)
0 diff
(100 %id)
T91219 liver and spleen .n-u 766 to 998 233 to 1   tiling clone,   233/233
(100 %)
0 diff
(100 %id)
AW971691   .n-u 884 to 1416 536 to 1   tiling clone, Submitted on the opposite strand 536/541
(99 %)
16 diff
(97.1 %id)
AA130857 colon, tumor .n-u 975 to 1417 453 to 1       453/453
(100 %)
18 diff
(96.1 %id)
AA258806 germinal center B cell .n-u 1064 to 1417 352 to 1       352/352
(100 %)
1 diff
(99.8 %id)
AA825721 germinal center B cell .n-u 1109 to 1420 351 to 42   tiling clone, AAA   310/310
(100 %)
1 diff
(99.7 %id)
N66527 cochlea, ear .n-u 1238 to 1412 176 to 2   tiling clone,   175/176
(99 %)
0 diff
(100 %id)
BF978027 melanotic melanoma, high MDR, skin .o 1 to 694 1 to 687 V52S I53H L54S V55C I56H ... tiling clone,   687/890
(77 %)
19 diff
(97.9 %id)
BE549317 cervical carcinoma cell line, cervix .o 294 to 1112 1 to 824 F3Y L28W V29* tiling clone,   824/1084
(76 %)
40 diff
(96.4 %id)
AA504555 germinal center B cell .p 1 to 302 1 to 299   tiling clone, fully sequenced, Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 299/299
(100 %)
10 diff
(96.7 %id)
AA194245 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .p 86 to 621 12 to 552 L16X A19X E27D A28E R29E ... tiling clone, Submitted on the opposite strand 541/557
(97 %)
12 diff
(97.9 %id)
AW969053   .p 90 to 682 596 to 1 exact   Submitted on the opposite strand 596/596
(100 %)
15 diff
(97.5 %id)
AA936499 pooled .p 161 to 668 511 to 4 exact tiling clone,   508/511
(99 %)
0 diff
(100 %id)
AW974079   .p 182 to 672 106 to 596 exact     491/596
(82 %)
10 diff
(98.4 %id)
AA568765 liposarcoma .p 186 to 612 1 to 426 E27D A28E R29D L30C N32T ...     426/426
(100 %)
5 diff
(98.9 %id)
AI221361 pooled .p 264 to 683 420 to 1       420/420
(100 %)
1 diff
(99.8 %id)
AA504478 germinal center B cell .p 272 to 683 422 to 11   tiling clone, fully sequenced, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 412/412
(100 %)
2 diff
(99.6 %id)
AI809465 B-cell, chronic lymphotic leukemia .q-u 1 to 447 448 to 2 exact tiling clone,   447/448
(99 %)
0 diff
(100 %id)
AI567930 adenocarcinoma, Pancreas .q-u 4 to 439 436 to 1   tiling clone,   436/436
(100 %)
1 diff
(99.8 %id)
AW439888 endometrioid ovarian metastasis, ovary .q-u 63 to 439 427 to 51   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 377/377
(100 %)
2 diff
(99.5 %id)
DB323270   Gene BICD1, variant not shown              
DA695667   Gene BICD1, variant not shown       capped      
DB312538 thalamus Gene BICD1, variant not shown         This clone was ignored    
DA409684 thalamus Gene BICD1, variant not shown       capped This clone was ignored    
BF089904 marrow Gene BICD1, variant not shown              
DB290161 uterus Gene BICD1, variant not shown       capped      
DB352989 uterus Gene BICD1, variant not shown              
AW905180 nervous_normal Gene BICD1, variant not shown              
TI_2194645818   Gene BICD1, variant not shown         Suspected internal deletion, this clone was ignored    
AA101455 brain, neuroepithelial cells Gene BICD1, variant not shown         This clone was ignored    
AA101456 brain, neuroepithelial cells Gene BICD1, variant not shown         This clone was ignored    
AA121882   Gene BICD1, variant not shown              
AA121883   Gene BICD1, variant not shown              
AI887336 serous papillary carcinoma, high grade, 2pooled tumors, uterus Gene BICD1, variant not shown              
AW103828 pooled Gene BICD1, variant not shown         Suspected internal deletion, this clone was ignored    
AW166760 serous papillary carcinoma, high grade, 2pooled tumors, uterus Gene BICD1, variant not shown       AAA      
BU952135.
matches multiple genes
Pancreas, Purified pancreatic islet Gene BICD1, variant not shown         This clone was ignored, also hits gene torire    
BU952135.
matches multiple genes
Pancreas, Purified pancreatic islet Gene torire, variant not shown         This clone was ignored, also hits gene torire    
BU170780 eye, retinoblastoma Gene BICD1, variant not shown         Suspected internal deletion, this clone was ignored    
DA955848 Spleen Gene BICD1, variant not shown       capped Suspected internal deletion, this clone was ignored    
TI_157611743   Gene BICD1, variant not shown       AAA      
DB212702 trachea Gene BICD1, variant not shown       capped      
DB348840 trachea Gene BICD1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m-u, .n-u, .o, .p, .q-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI