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Gene BCL10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
153 supporting clones for gene BCL10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
EF189176 ocular adnexal MALT lymphomas .a -9 to 767 1 to 778 S187F T188Y N189* tiling clone,   778/778
(100 %)
5 diff
(99.4 %id)
AW978908   .b 1 to 531 1 to 531   tiling clone,   531/533
(99 %)
9 diff
(98.4 %id)
DB028243 testis .b 160 to 702 2 to 545   capped   544/544
(100 %)
3 diff
(99.5 %id)
BI831624 brain, medulla .b 177 to 951 1 to 778   tiling clone,   778/779
(99 %)
23 diff
(97.1 %id)
TI_57172373   .b 177 to 951 33 to 810       778/811
(95 %)
27 diff
(96.7 %id)
NM_003921.4   .b 177 to 3278 1 to 3102   RefSeq, AAA   3102/3102
(100 %)
1 diff
(100.0 %id)
DW461578 Liver .b 442 to 558 10 to 126       117/126
(92 %)
6 diff
(95.3 %id)
DA714910   .b 448 to 996 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
BX475736   .b 449 to 1009 1 to 560       560/560
(100 %)
5 diff
(99.2 %id)
DA712601   .b 451 to 999 2 to 553   capped   552/556
(99 %)
5 diff
(99.2 %id)
DB443359 testis .b 453 to 903 1 to 449       449/449
(100 %)
10 diff
(97.8 %id)
TI_57162023   .b 459 to 1219 25 to 784       760/784
(96 %)
14 diff
(98.3 %id)
BI832669 pooled pancreas and spleen .b 460 to 1219 1 to 759       759/759
(100 %)
10 diff
(98.7 %id)
BP337258 coronary artery .b 461 to 1041 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
AF100338   .b 480 to 1901 1 to 1420       1420/1421
(99 %)
12 diff
(99.2 %id)
AF057700   .b 484 to 1896 1 to 1414       1414/1414
(100 %)
3 diff
(99.8 %id)
AF134395   .b 484 to 1896 1 to 1413   tiling clone,   1413/1413
(100 %)
0 diff
(100 %id)
AA278444 germinal center B cell .b 484 to 1012 1 to 525       525/526
(99 %)
14 diff
(97.4 %id)
BX956474   .b 498 to 1069 1 to 571       571/571
(100 %)
3 diff
(99.5 %id)
BX953058   .b 498 to 943 1 to 446       446/446
(100 %)
2 diff
(99.6 %id)
DA660063   .b 498 to 856 2 to 360   capped   359/359
(100 %)
1 diff
(99.8 %id)
DA487680 brain .b 516 to 1103 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
AK291346 tongue .b 519 to 2104 1 to 1587       1587/1587
(100 %)
2 diff
(99.9 %id)
DA766545 tongue .b 520 to 1077 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
CN335360 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 558 to 821 13 to 276       264/276
(95 %)
11 diff
(96.1 %id)
BP270539 small intestine .b 567 to 1149 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
BP242083 Liver .b 571 to 1155 1 to 584       584/584
(100 %)
3 diff
(99.5 %id)
CD580558 brain .b 581 to 1292 8 to 718       711/860
(82 %)
27 diff
(96.9 %id)
DA480251   .b 582 to 1138 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA710703   .b 582 to 1136 2 to 557   capped   556/556
(100 %)
3 diff
(99.5 %id)
BP222724   .b 601 to 1182 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP233691 coronary artery .b 605 to 1192 1 to 588       588/588
(100 %)
0 diff
(100 %id)
BX376539 Neuroblastoma Cot 50-normalized .b 606 to 1679 1 to 1060 E30K *234L     1060/1065
(99 %)
24 diff
(97.8 %id)
BC053617 Eye, retinoblastoma .b 607 to 1894 1 to 1288   available from MGC, AAA   1288/1288
(100 %)
0 diff
(100 %id)
TI_1948214761   .b 607 to 1342 86 to 824   fully sequenced, Submitted on the opposite strand 739/739
(100 %)
1 diff
(99.9 %id)
BU159849 eye, retinoblastoma .b 608 to 1509 1 to 905 D197G G199R A200G P201S P202S ...     905/905
(100 %)
6 diff
(99.4 %id)
DA884315   .b 634 to 1170 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
BP235147 coronary artery .b 640 to 1229 1 to 592       592/592
(100 %)
11 diff
(98.2 %id)
BP337070 coronary artery .b 643 to 1230 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
DN999301   .b 663 to 1340 1 to 678       678/678
(100 %)
3 diff
(99.6 %id)
DA425788 colon .b 701 to 1199 2 to 500   capped   499/499
(100 %)
2 diff
(99.6 %id)
DA505482 brain .b 702 to 1268 2 to 571   capped   570/570
(100 %)
4 diff
(99.3 %id)
DA044867 bladder .b 705 to 1274 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA997563   .b 708 to 1272 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
AU310967 neuroblastoma .b 713 to 1288 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
DA020862   .b 714 to 1282 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA548305   .b 714 to 1276 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
TI_1948215107   .b 728 to 1020 135 to 427       293/320
(91 %)
6 diff
(98.2 %id)
TI_1948215283   .b 728 to 922 143 to 337   fully sequenced,   195/222
(87 %)
6 diff
(97.3 %id)
AF105066 Spleen .b 729 to 1430 1 to 702       702/702
(100 %)
0 diff
(100 %id)
AF127386   .b 729 to 1430 1 to 702       702/702
(100 %)
0 diff
(100 %id)
EL734761 mixed .b 729 to 1347 1 to 619       619/619
(100 %)
0 diff
(100 %id)
BP233868 coronary artery .b 729 to 1316 1 to 588       588/588
(100 %)
2 diff
(99.7 %id)
AA455396 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 747 to 1184 1 to 438   fully sequenced,   438/438
(100 %)
3 diff
(99.4 %id)
BG393233 embryonal carcinoma, cell line, testis .b 752 to 1448 1 to 697       697/992
(70 %)
2 diff
(99.8 %id)
BQ440503 leiomyosarcoma, uterus .b 784 to 1637 1 to 870       870/870
(100 %)
22 diff
(97.5 %id)
BU169446 embryonal carcinoma, cell line, testis .b 808 to 1687 1 to 880       880/880
(100 %)
2 diff
(99.8 %id)
AW190998 adenocarcinoma, Pancreas .b 856 to 1516 655 to 1       655/656
(99 %)
17 diff
(97.5 %id)
TI_1948215284   .b 892 to 1440 663 to 112   fully sequenced,   552/663
(83 %)
0 diff
(100 %id)
BU621795 cell lines, Chondrosarcoma .b 899 to 1611 732 to 19   AAA   714/714
(100 %)
3 diff
(99.6 %id)
BP355253   .b 947 to 1530 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
BG256634 embryonal carcinoma, cell line, testis .b 955 to 1710 1 to 753       753/1036
(72 %)
28 diff
(97.3 %id)
AW582249 stomach .b 1012 to 1705 705 to 10       696/722
(96 %)
1 diff
(99.9 %id)
CU454733 epidermis .b 1026 to 1384 1 to 359       359/367
(97 %)
9 diff
(97.6 %id)
CU454586 epidermis .b 1027 to 1384 367 to 10     Submitted on the opposite strand 358/368
(97 %)
4 diff
(99.0 %id)
BQ363239 stomach .b 1035 to 1600 708 to 140       569/789
(72 %)
5 diff
(99.4 %id)
W93117 liver and spleen .b 1044 to 1462 420 to 1       420/420
(100 %)
3 diff
(99.3 %id)
BG111994 Bone, osteosarcoma, cell line .b 1079 to 1813 1 to 743       743/980
(75 %)
19 diff
(98.1 %id)
AA837051 germinal center B cell .b 1095 to 1585 495 to 5       491/495
(99 %)
0 diff
(100 %id)
TI_1948215108   .b 1140 to 1440 413 to 111       303/317
(95 %)
0 diff
(100 %id)
AA456036 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1154 to 1460 308 to 1   fully sequenced,   308/308
(100 %)
1 diff
(99.7 %id)
TI_1948214760   .b 1312 to 1912 732 to 131   fully sequenced, Submitted on the opposite strand 602/732
(82 %)
7 diff
(99.1 %id)
AW994906 breast_normal .b 1404 to 1941 1 to 538       538/538
(100 %)
3 diff
(99.5 %id)
AW994898 breast_normal .b 1405 to 1934 1 to 530       530/530
(100 %)
1 diff
(99.9 %id)
AW994909 breast_normal .b 1408 to 1841 1 to 434       434/434
(100 %)
4 diff
(99.1 %id)
AW994919 breast_normal .b 1411 to 1996 1 to 586       586/586
(100 %)
6 diff
(99.0 %id)
AW995071 breast_normal .b 1412 to 1799 1 to 393       393/477
(82 %)
19 diff
(96.1 %id)
AW994899 breast_normal .b 1417 to 1949 1 to 532       532/532
(100 %)
8 diff
(98.5 %id)
BQ292090 amnion_normal .b 1433 to 1862 19 to 448       430/448
(95 %)
6 diff
(98.7 %id)
AW994928 breast_normal .b 1456 to 1934 1 to 478       478/478
(100 %)
10 diff
(98.0 %id)
AA347103 heart .b 1509 to 1808 1 to 300       300/300
(100 %)
1 diff
(99.7 %id)
AW961676   .b 1510 to 2253 1 to 741   tiling clone,   741/741
(100 %)
11 diff
(98.6 %id)
AA279060 germinal center B cell .b 1513 to 1896 384 to 1       384/384
(100 %)
0 diff
(100 %id)
AW994903 breast_normal .b 1532 to 2064 543 to 11     Submitted on the opposite strand 533/543
(98 %)
0 diff
(100 %id)
AW994924 breast_normal .b 1550 to 2058 509 to 1     Submitted on the opposite strand 509/509
(100 %)
2 diff
(99.7 %id)
AW994916 breast_normal .b 1669 to 1892 222 to 1     Submitted on the opposite strand 222/223
(99 %)
9 diff
(96.0 %id)
AA179565   .b 1721 to 2159 1 to 438       438/441
(99 %)
7 diff
(98.5 %id)
BQ334175 marrow .b 1791 to 1999 11 to 223       213/233
(91 %)
15 diff
(93.6 %id)
AW884861 ovary .b 1888 to 2050 174 to 12       163/188
(86 %)
0 diff
(100 %id)
BU178599 leiomyosarcoma, uterus .b 2033 to 2808 1 to 770   tiling clone, AAA   770/770
(100 %)
3 diff
(99.7 %id)
TI_149272434   .b 2151 to 2808 750 to 93   AAA   658/970
(67 %)
8 diff
(99.2 %id)
TI_154007418   .b 2156 to 2808 739 to 84   AAA   656/918
(71 %)
9 diff
(99.1 %id)
BU675067 lung, Primary Lung Epithelial Cells .b 2158 to 2808 669 to 19   AAA   651/654
(99 %)
3 diff
(99.6 %id)
BM988482 lung, Metastatic Chondrosarcoma .b 2163 to 2802 1 to 640   tiling clone, Submitted on the opposite strand 640/640
(100 %)
1 diff
(99.9 %id)
TI_154032836   .b 2165 to 2808 729 to 85   AAA   645/973
(66 %)
1 diff
(99.9 %id)
CA443148 lung, Metastatic Chondrosarcoma .b 2165 to 2808 663 to 19   AAA   645/653
(98 %)
1 diff
(99.9 %id)
TI_149275075   .b 2166 to 2808 742 to 99   AAA   644/958
(67 %)
2 diff
(99.8 %id)
AI244070 Kidney .b 2178 to 2473 1 to 296     Submitted on the opposite strand 296/296
(100 %)
0 diff
(100 %id)
BU676530 lung, Primary Lung Epithelial Cells .b 2182 to 2808 646 to 19   AAA   628/628
(100 %)
2 diff
(99.7 %id)
CA434956 lung, Metastatic Chondrosarcoma .b 2218 to 2808 610 to 19   AAA   592/592
(100 %)
2 diff
(99.7 %id)
BM740377 Ascites, stomach .b 2257 to 2751 1 to 493       493/493
(100 %)
9 diff
(98.2 %id)
CN335359 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2268 to 2765 1 to 498       498/498
(100 %)
1 diff
(99.8 %id)
CA444129 Fibrosarcoma .b 2302 to 2808 526 to 19   AAA   508/508
(100 %)
1 diff
(99.9 %id)
AA227674 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2327 to 2674 349 to 2     Submitted on the opposite strand 348/433
(80 %)
0 diff
(100 %id)
AA179518   .b 2346 to 2808 480 to 18   AAA   463/468
(98 %)
0 diff
(100 %id)
BG191876   .b 2350 to 2723 1 to 374   AAA   374/374
(100 %)
1 diff
(99.8 %id)
BG182985   .b 2353 to 2723 388 to 18   AAA Submitted on the opposite strand 371/371
(100 %)
0 diff
(100 %id)
DB516073 testis .b 2372 to 2808 1 to 436     Submitted on the opposite strand 436/436
(100 %)
2 diff
(99.6 %id)
AW797914 uterus .b 2381 to 2677 22 to 318       297/327
(90 %)
6 diff
(98.2 %id)
DB508285 testis .b 2384 to 2808 1 to 425     Submitted on the opposite strand 425/425
(100 %)
2 diff
(99.6 %id)
BF475805 sciatic nerve .b 2396 to 2809 420 to 7       414/420
(98 %)
0 diff
(100 %id)
AI634587 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2423 to 2809 387 to 1       387/387
(100 %)
1 diff
(99.8 %id)
AI952930 pooled germ cell tumors .b 2428 to 2809 390 to 9       382/390
(97 %)
0 diff
(100 %id)
AI753953 bone marrow stroma .b 2430 to 2808 397 to 19   AAA   379/379
(100 %)
1 diff
(99.8 %id)
AI640248 Kidney .b 2433 to 2808 393 to 18   AAA   376/406
(92 %)
2 diff
(99.6 %id)
AI990571 pooled germ cell tumors .b 2433 to 2808 376 to 1       376/376
(100 %)
0 diff
(100 %id)
CB986075 Pooled-Glandular .b 2435 to 2808 1 to 374       374/853
(43 %)
2 diff
(99.8 %id)
AW844776 colon_normal .b 2449 to 2925 473 to 1       473/532
(88 %)
11 diff
(98.0 %id)
AI689618 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 2454 to 2808 355 to 1       355/355
(100 %)
0 diff
(100 %id)
AI473669 colon, moderately-differentiated adenocarcinoma .b 2457 to 2808 352 to 1       352/352
(100 %)
1 diff
(99.8 %id)
AW797911 uterus .b 2463 to 2677 226 to 10       217/238
(91 %)
0 diff
(100 %id)
FN161550 breast carcinoma .b 2466 to 2582 115 to 1     Submitted on the opposite strand 115/115
(100 %)
4 diff
(96.6 %id)
BU861266 mixed (pool of 40 RNAs) .b 2504 to 2723 1 to 220   AAA   220/220
(100 %)
3 diff
(98.7 %id)
CA420027 Bone, Human Chondrosarcoma Cell Line .b 2518 to 3278 777 to 17   tiling clone, AAA   761/761
(100 %)
1 diff
(99.9 %id)
AW023897 cochlea, ear .b 2522 to 2808 1 to 287   AAA   287/287
(100 %)
4 diff
(98.7 %id)
AI758280 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 2616 to 2809 195 to 1       195/195
(100 %)
1 diff
(99.5 %id)
TI_149271387   .b 2714 to 3276 658 to 97   AAA   562/937
(59 %)
0 diff
(100 %id)
BU674382 lung, Primary Lung Epithelial Cells .b 2831 to 3276 466 to 21   AAA   446/448
(99 %)
0 diff
(100 %id)
FN094979 breast carcinoma .b 2880 to 2973 1 to 97       97/97
(100 %)
3 diff
(97.0 %id)
BP380674   .c 1 to 640 1 to 644   tiling clone,   644/757
(85 %)
16 diff
(97.9 %id)
AW468648 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .c 341 to 793 453 to 1   tiling clone,   453/453
(100 %)
4 diff
(99.2 %id)
DB462554 testis .d-u 1 to 490 1 to 490   tiling clone,   490/490
(100 %)
6 diff
(98.8 %id)
DA688717   .d-u 62 to 596 2 to 537 R40X P41A S42V S44L R45P ... capped   536/536
(100 %)
3 diff
(99.5 %id)
DB206212 trachea .d-u 74 to 656 2 to 585 R40X P41A S42V S44L R45P ... capped   584/584
(100 %)
3 diff
(99.5 %id)
DB206347 trachea .d-u 74 to 654 2 to 582 R123G tiling clone, capped   581/581
(100 %)
2 diff
(99.7 %id)
DA517379 brain .d-u 171 to 665 2 to 496   tiling clone, capped   495/495
(100 %)
2 diff
(99.6 %id)
AL704205 human skeletal muscle .d-u 176 to 892 1 to 716   tiling clone,   716/716
(100 %)
5 diff
(99.4 %id)
DA677864   .d-u 256 to 839 2 to 585   capped   584/584
(100 %)
3 diff
(99.5 %id)
AK098790 brain .d-u 384 to 2247 1 to 1864   tiling clone, available from FLJ, AAA   1864/1864
(100 %)
3 diff
(99.9 %id)
CR748268 pooled .d-u 955 to 1354 1 to 401       401/401
(100 %)
2 diff
(99.6 %id)
BG287155 bladder, transitional cell papilloma, cell line .d-u 1240 to 1871 1 to 629   tiling clone, AAA   629/629
(100 %)
3 diff
(99.6 %id)
BU752629 placenta .d-u 1649 to 1871 236 to 14   AAA   223/223
(100 %)
2 diff
(99.2 %id)
AI678095 pooled .d-u 1685 to 2248 586 to 23       564/586
(96 %)
0 diff
(100 %id)
DB527969 testis .d-u 1780 to 2248 1 to 469     Submitted on the opposite strand 469/473
(99 %)
1 diff
(99.8 %id)
AW183179 pooled .d-u 1811 to 2247 447 to 11   AAA   437/437
(100 %)
0 diff
(100 %id)
AI221210 pooled .d-u 1843 to 2247 416 to 12   AAA   405/405
(100 %)
0 diff
(100 %id)
FN134056 breast carcinoma .d-u 1856 to 1944 88 to 1     Submitted on the opposite strand 88/89
(98 %)
1 diff
(98.9 %id)
AA994334 pooled .d-u 1977 to 2307 332 to 2   tiling clone,   331/332
(99 %)
0 diff
(100 %id)
DB090628 testis .e 1 to 572 2 to 573 N23D tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
DB242452 stomach, tumor tissue .e 51 to 436 2 to 385 K45N I46T L47Q S48* tiling clone, capped   384/388
(98 %)
3 diff
(99.3 %id)
BX647306 human esophagus tumor Gene BCL10, variant not shown       available from DKFZ, AAA Suspected internal deletion, this clone was ignored    
CA426727 cell lines, Chondrosarcoma Gene BCL10, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BU680609 lung, Primary Lung Epithelial Cells Gene BCL10, variant not shown         Suspected internal deletion, this clone was ignored    
AJ006288   Gene BCL10, variant not shown         This clone was ignored    
AF082283 Spleen Gene BCL10, variant not shown       AAA Suspected internal deletion, suspected internal deletion, this clone was ignored    
DB280066 uterus Gene BCL10, variant not shown       capped      
DB352423 uterus Gene BCL10, variant not shown              
DA324959 hippocampus Gene BCL10, variant not shown       capped      
AA453447   Gene BCL10, variant not shown         This clone was ignored    
AA453950   Gene BCL10, variant not shown         This clone was ignored    
TI_149284598   Gene BCL10, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI