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Gene BCAS1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
451 representative clones for gene BCAS1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC345665 tongue, tumor tissue .a 1 to 590 1 to 591   tiling clone,   591/591
(100 %)
2 diff
(99.7 %id)
AK315220 tongue, tumor tissue .a 71 to 2154 1 to 2084   tiling clone,   2084/2093
(99 %)
4 diff
(99.9 %id)
DC347404 tongue, tumor tissue .a 71 to 636 1 to 567       567/567
(100 %)
2 diff
(99.7 %id)
NM_003657.2   .a 71 to 3545 1 to 3475 exact RefSeq,   3475/3475
(100 %)
0 diff
(100 %id)
DC384213 Prostate .a 177 to 715 1 to 539   tiling clone,   539/539
(100 %)
1 diff
(99.9 %id)
BP342645 stomach mucosa .a 242 to 819 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
AU098652   .a 244 to 543 1 to 300       300/300
(100 %)
4 diff
(98.7 %id)
BP221191 colon .a 244 to 806 1 to 563       563/563
(100 %)
4 diff
(99.3 %id)
DC392782 breast, tumor tissue .a 244 to 813 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC392784 breast, tumor tissue .a 244 to 781 1 to 535       535/535
(100 %)
1 diff
(99.9 %id)
BP221049 colon .a 271 to 833 1 to 564       564/564
(100 %)
3 diff
(99.5 %id)
DC414352 trachea .a 271 to 855 1 to 585       585/585
(100 %)
2 diff
(99.7 %id)
DC345071 colon .a 272 to 826 1 to 556       556/556
(100 %)
5 diff
(99.2 %id)
BP383205 ilea mucosa .a 272 to 925 1 to 646       646/710
(90 %)
19 diff
(97.4 %id)
DC384163 Prostate .a 273 to 781 1 to 509       509/509
(100 %)
3 diff
(99.5 %id)
DC392335 stomach .a 273 to 839 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC414482 trachea .a 273 to 859 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
DC345527 tongue, tumor tissue .a 274 to 842 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
DC347151 tongue, tumor tissue .a 274 to 843 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC419137 stomach, tumor tissue .a 274 to 845 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
BX486692   .a 278 to 860 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BG468930 adenocarcinoma cell line, colon .a 290 to 945 1 to 667       667/668
(99 %)
25 diff
(96.3 %id)
DB004208 breast, tumor tissue .a 290 to 828 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
AF041260   .a 292 to 3107 1 to 2813 S583P tiling clone,   2813/2813
(100 %)
4 diff
(99.9 %id)
DB201119 trachea .a 292 to 873 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
DB195203 trachea .a 297 to 799 2 to 504   capped   503/503
(100 %)
1 diff
(99.9 %id)
AK308384 trachea .a 302 to 1410 1 to 1108       1108/1108
(100 %)
3 diff
(99.8 %id)
BP342407 stomach mucosa .a 302 to 884 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DC415248 trachea .a 302 to 843 1 to 542       542/542
(100 %)
2 diff
(99.7 %id)
DA584810 lung .a 303 to 884 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA866372 Prostate .a 307 to 838 2 to 533   capped   532/532
(100 %)
2 diff
(99.7 %id)
DB210091 trachea .a 311 to 781 2 to 472   capped   471/471
(100 %)
1 diff
(99.8 %id)
DA041061 bladder .a 325 to 885 2 to 564   capped   563/564
(99 %)
5 diff
(99.2 %id)
TI_1520875395   .a 354 to 1509 47 to 1183       1137/1183
(96 %)
52 diff
(95.7 %id)
BC126346 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 360 to 2722 1 to 2363 exact     2363/2363
(100 %)
2 diff
(100.0 %id)
BC126348 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 360 to 2714 1 to 2355 Q24K V163A     2355/2355
(100 %)
4 diff
(99.9 %id)
DN995424 breast cancer, Mammary gland (cancer tissue) .a 404 to 886 17 to 499       481/499
(96 %)
6 diff
(98.8 %id)
BM912146 amelanotic melanoma, cell line, skin .a 435 to 1297 1 to 865       865/1086
(79 %)
28 diff
(97.5 %id)
DB174579 kidney, tumor tissue .a 554 to 1123 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
BP341239 stomach mucosa .a 590 to 1166 1 to 578       578/578
(100 %)
4 diff
(99.4 %id)
DB460735 testis .a 639 to 1030 1 to 392       392/392
(100 %)
2 diff
(99.5 %id)
DA352711 substantia nigra .a 700 to 1279 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA341180 substantia nigra .a 743 to 1310 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB174591 kidney, tumor tissue .a 745 to 1317 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA270994 caudate nucleus .a 758 to 1315 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BM796403 Ascites, stomach .a 776 to 1123 1 to 348       348/348
(100 %)
0 diff
(100 %id)
TI_1520876801   .a 786 to 1665 1 to 878       878/878
(100 %)
13 diff
(98.6 %id)
DA281817 corpus callosum .a 788 to 1327 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB057054 testis .a 802 to 1276 2 to 476   capped   475/475
(100 %)
0 diff
(100 %id)
BE249939 adenocarcinoma cell line, colon .a 812 to 1592 1 to 782       782/1038
(75 %)
4 diff
(99.7 %id)
BE293603 adenocarcinoma cell line, colon .a 812 to 1318 1 to 508       508/508
(100 %)
1 diff
(99.9 %id)
DA087867 cerebellum .a 824 to 1396 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
BP199106 brain .a 826 to 1424 1 to 598       598/598
(100 %)
2 diff
(99.7 %id)
DA261583 caudate nucleus .a 826 to 1326 2 to 502   capped   501/501
(100 %)
0 diff
(100 %id)
DA064199 cerebellum .a 837 to 1281 2 to 450   capped   449/450
(99 %)
5 diff
(98.9 %id)
DB473233 hippocampus .a 870 to 1340 1 to 471       471/471
(100 %)
2 diff
(99.6 %id)
BG702473 brain, hippocampus .a 884 to 1544 1 to 661       661/1076
(61 %)
14 diff
(98.7 %id)
BP193074 brain .a 887 to 1469 1 to 582       582/582
(100 %)
9 diff
(98.5 %id)
DA283606 corpus callosum .a 887 to 1328 2 to 443   capped   442/442
(100 %)
2 diff
(99.6 %id)
DB468612 hippocampus .a 887 to 1326 1 to 440       440/440
(100 %)
1 diff
(99.8 %id)
DB480715 hippocampus .a 887 to 1265 1 to 379       379/379
(100 %)
5 diff
(98.7 %id)
DB481100 hippocampus .a 887 to 1132 1 to 246       246/247
(99 %)
3 diff
(98.8 %id)
DB490728 hypothalamus .a 887 to 1315 1 to 431       431/431
(100 %)
7 diff
(98.4 %id)
DB500842 hypothalamus .a 887 to 1268 1 to 382       382/386
(98 %)
2 diff
(99.5 %id)
DA515455 brain .a 888 to 1438 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB179831 kidney, tumor tissue .a 888 to 1428 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA290346 hippocampus .a 889 to 1342 2 to 456   capped   455/460
(98 %)
5 diff
(99.0 %id)
DA129327 alzheimer cortex .a 890 to 1340 2 to 452   capped   451/451
(100 %)
1 diff
(99.8 %id)
DA177244 amygdala .a 890 to 1339 2 to 451   capped   450/450
(100 %)
0 diff
(100 %id)
BP195050 brain .a 891 to 1474 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
DA201665 brain .a 891 to 1400 2 to 511   capped   510/510
(100 %)
1 diff
(99.9 %id)
DB463394 hippocampus .a 892 to 1326 1 to 435       435/435
(100 %)
7 diff
(98.4 %id)
DB465397 hippocampus .a 892 to 1273 1 to 384       384/429
(89 %)
12 diff
(97.3 %id)
DB466449 hippocampus .a 892 to 1318 1 to 427       427/427
(100 %)
11 diff
(97.5 %id)
DB467287 hippocampus .a 892 to 1336 1 to 443       443/452
(98 %)
7 diff
(98.5 %id)
DB468464 hippocampus .a 892 to 1251 1 to 359       359/359
(100 %)
11 diff
(97.0 %id)
DB481372 hippocampus .a 892 to 1332 1 to 441       441/441
(100 %)
4 diff
(99.1 %id)
DB501528 hypothalamus .a 892 to 1132 1 to 248       248/253
(98 %)
9 diff
(96.5 %id)
DA257969 caudate nucleus .a 893 to 1449 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA267918 caudate nucleus .a 893 to 1059 2 to 168   capped   167/167
(100 %)
0 diff
(100 %id)
DA278785 corpus callosum .a 893 to 1453 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA287776 corpus callosum .a 893 to 1457 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA357234 subthalamic nucleus .a 893 to 1206 2 to 315   capped   314/314
(100 %)
0 diff
(100 %id)
BE091816 breast .a 935 to 1202 1 to 268       268/268
(100 %)
8 diff
(97.1 %id)
BF919391 nervous_tumor .a 1045 to 1202 17 to 174       158/174
(90 %)
6 diff
(96.6 %id)
TI_1520876805   .a 1177 to 2053 9 to 881       873/882
(98 %)
12 diff
(98.7 %id)
BE091817 breast .a 1225 to 1333 1 to 109       109/109
(100 %)
0 diff
(100 %id)
BG290366 bladder, transitional cell papilloma, cell line .a 1298 to 2089 1 to 792       792/837
(94 %)
13 diff
(98.5 %id)
AW453053   .a 1341 to 1721 381 to 1       381/381
(100 %)
0 diff
(100 %id)
BI041215 nervous_tumor .a 1580 to 1856 1 to 277       277/280
(98 %)
3 diff
(99.0 %id)
TI_1520874755   .a 1593 to 2730 1201 to 65       1137/1288
(88 %)
29 diff
(97.8 %id)
TI_1520875397   .a 1594 to 2730 1209 to 68       1142/1306
(87 %)
21 diff
(98.4 %id)
TI_1520874757   .a 1629 to 2722 1157 to 64   tiling clone,   1094/1302
(84 %)
16 diff
(98.8 %id)
AA644590 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1636 to 2029 1 to 394       394/394
(100 %)
1 diff
(99.8 %id)
BF853823 lung_normal .a 1686 to 2011 1 to 322       322/322
(100 %)
4 diff
(98.8 %id)
TI_1520872617   .a 1815 to 2532 721 to 3       719/721
(99 %)
1 diff
(99.9 %id)
BE503452 pooled germ cell tumors .a 1826 to 2158 333 to 1       333/337
(98 %)
20 diff
(94.1 %id)
BF082432 breast_normal .a 1952 to 2130 184 to 9       176/184
(95 %)
6 diff
(96.8 %id)
BM702087 eye, optic nerve .a 2089 to 2676 1 to 589     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 589/589
(100 %)
5 diff
(99.2 %id)
TI_1520876785   .a 2213 to 2722 641 to 131       511/641
(79 %)
0 diff
(100 %id)
BX282664 adenocarcinoma, Pancreas .a 2234 to 2723 1 to 490       490/490
(100 %)
2 diff
(99.6 %id)
BP216015 corpus callosum .a 2249 to 2830 1 to 581   tiling clone,   581/581
(100 %)
6 diff
(99.0 %id)
BG960705 colon .a 2311 to 2687 378 to 1       378/378
(100 %)
5 diff
(98.7 %id)
DB531406 hippocampus .a 2320 to 2754 1 to 435     Submitted on the opposite strand 435/437
(99 %)
1 diff
(99.8 %id)
AI955360 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2344 to 2756 414 to 1       414/414
(100 %)
1 diff
(99.8 %id)
CD617340   .a 2345 to 2476 132 to 1       132/132
(100 %)
2 diff
(98.5 %id)
TI_1520872763   .a 2409 to 2722 1 to 314       314/438
(71 %)
9 diff
(98.0 %id)
BF675198 Prostate .a 2484 to 2992 1 to 504       504/787
(64 %)
9 diff
(98.9 %id)
BE566889 bladder, carcinoma, cell line .a 2504 to 2999 1 to 503       503/767
(65 %)
22 diff
(97.2 %id)
BE866183 bladder, carcinoma, cell line .a 2504 to 3103 1 to 590       590/599
(98 %)
23 diff
(96.2 %id)
AI573188 adenocarcinoma, Pancreas .a 2611 to 3109 496 to 1       496/496
(100 %)
3 diff
(99.4 %id)
AA554549 breast .a 2735 to 3107 372 to 1       372/372
(100 %)
3 diff
(99.2 %id)
BM666673 eye, optic nerve .a 2735 to 3395 676 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 658/659
(99 %)
6 diff
(99.1 %id)
AI866942 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 2736 to 3108 371 to 1       371/401
(92 %)
3 diff
(99.3 %id)
BF929125 nervous_tumor .a 2742 to 3091 348 to 2     Submitted on the opposite strand 347/348
(99 %)
0 diff
(100 %id)
DB466841 hippocampus .a 2746 to 3180 1 to 433       433/433
(100 %)
10 diff
(97.7 %id)
DB636461 hippocampus .a 2746 to 3476 1 to 724       724/724
(100 %)
18 diff
(97.6 %id)
BF835891 head_neck .a 2761 to 3086 330 to 7   tiling clone, Submitted on the opposite strand 324/337
(96 %)
0 diff
(100 %id)
AI828071 anaplastic oligodendroglioma, brain .a 2768 to 3113 346 to 1       346/346
(100 %)
0 diff
(100 %id)
AI400362 Prostate .a 2787 to 3110 324 to 1       324/324
(100 %)
0 diff
(100 %id)
AW129334 anaplastic oligodendroglioma, brain .a 2789 to 3113 326 to 1       326/326
(100 %)
4 diff
(98.8 %id)
BF589653 Prostate .a 2823 to 3107 285 to 1       285/285
(100 %)
0 diff
(100 %id)
DB533795 hippocampus .a 2836 to 3541 18 to 721     Submitted on the opposite strand 704/721
(97 %)
10 diff
(98.7 %id)
DB569619 hypothalamus .a 2867 to 3391 1 to 525     Submitted on the opposite strand 525/525
(100 %)
0 diff
(100 %id)
DB550194 hippocampus .a 2897 to 3384 1 to 488     Submitted on the opposite strand 488/488
(100 %)
2 diff
(99.6 %id)
AA985123 schizophrenic brain S-11 frontal lobe .a 2897 to 3093 198 to 1       198/198
(100 %)
2 diff
(99.0 %id)
DB540389 hippocampus .a 2906 to 3391 1 to 486     Submitted on the opposite strand 486/487
(99 %)
3 diff
(99.4 %id)
DB542003 hippocampus .a 2915 to 3389 1 to 475     Submitted on the opposite strand 475/477
(99 %)
3 diff
(99.4 %id)
TI_149308137   .a 2917 to 3384 554 to 88   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 467/922
(50 %)
3 diff
(99.7 %id)
BU686926 lung, Primary Lung Epithelial Cells .a 2917 to 3384 482 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 467/506
(92 %)
3 diff
(99.5 %id)
DB572014 hypothalamus .a 2923 to 3391 1 to 469     Submitted on the opposite strand 469/469
(100 %)
2 diff
(99.6 %id)
DB565910 hypothalamus .a 2931 to 3391 1 to 461     Submitted on the opposite strand 461/461
(100 %)
2 diff
(99.6 %id)
DB536124 hippocampus .a 2934 to 3391 1 to 458     Submitted on the opposite strand 458/458
(100 %)
4 diff
(99.2 %id)
TI_149273115   .a 2937 to 3541 712 to 108   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 605/787
(76 %)
4 diff
(99.5 %id)
BU675569 lung, Primary Lung Epithelial Cells .a 2937 to 3541 623 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 605/617
(98 %)
4 diff
(99.4 %id)
CB050927 Prostate .a 2972 to 3390 1 to 419       419/419
(100 %)
8 diff
(98.1 %id)
D45257   .a 2993 to 3293 1 to 296       296/296
(100 %)
12 diff
(96.0 %id)
BU929951 Prostate .a 3030 to 3483 1 to 459       459/815
(56 %)
10 diff
(98.8 %id)
AI088799 brain, glioblastoma (pooled) .a 3031 to 3544 515 to 2       514/515
(99 %)
0 diff
(100 %id)
DB551551 hippocampus .a 3051 to 3541 1 to 491     Submitted on the opposite strand 491/491
(100 %)
3 diff
(99.4 %id)
DB540715 hippocampus .a 3057 to 3540 1 to 484   tiling clone, Submitted on the opposite strand 484/485
(99 %)
1 diff
(99.8 %id)
AW890676 nervous_tumor .a 3058 to 3297 1 to 241       241/241
(100 %)
8 diff
(96.7 %id)
DB551276 hippocampus .a 3061 to 3541 1 to 481     Submitted on the opposite strand 481/481
(100 %)
0 diff
(100 %id)
DB572730 hypothalamus .a 3063 to 3541 1 to 479     Submitted on the opposite strand 479/479
(100 %)
4 diff
(99.2 %id)
DB547975 hippocampus .a 3074 to 3541 1 to 470     Submitted on the opposite strand 470/470
(100 %)
32 diff
(93.2 %id)
DB549919 hippocampus .a 3074 to 3540 1 to 467     Submitted on the opposite strand 467/468
(99 %)
4 diff
(99.2 %id)
DB577380 hypothalamus .a 3077 to 3391 1 to 316     Submitted on the opposite strand 316/316
(100 %)
6 diff
(98.2 %id)
DB540807 hippocampus .a 3081 to 3540 1 to 460     Submitted on the opposite strand 460/461
(99 %)
4 diff
(99.2 %id)
AV726142 hypothalamus .a 3085 to 3541 1 to 457   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 457/457
(100 %)
0 diff
(100 %id)
C18445 placenta .a 3087 to 3452 1 to 363       363/363
(100 %)
4 diff
(98.9 %id)
D79149 placenta .a 3087 to 3474 1 to 378       378/379
(99 %)
18 diff
(95.3 %id)
DB545810 hippocampus .a 3089 to 3540 1 to 452     Submitted on the opposite strand 452/453
(99 %)
1 diff
(99.8 %id)
AV722939 hypothalamus .a 3092 to 3551 1 to 460       460/573
(80 %)
5 diff
(99.2 %id)
AI423446 brain, glioblastoma (pooled) .a 3092 to 3542 451 to 1       451/451
(100 %)
3 diff
(99.4 %id)
DB535970 hippocampus .a 3097 to 3540 1 to 444     Submitted on the opposite strand 444/445
(99 %)
4 diff
(99.2 %id)
DB535751 hippocampus .a 3104 to 3541 1 to 439     Submitted on the opposite strand 439/439
(100 %)
8 diff
(98.2 %id)
BE833675 ovary .a 3111 to 3364 22 to 277       256/287
(89 %)
12 diff
(95.9 %id)
DB530419 hippocampus .a 3111 to 3540 1 to 427     Submitted on the opposite strand 427/428
(99 %)
10 diff
(97.7 %id)
DB549487 hippocampus .a 3114 to 3545 1 to 430     Submitted on the opposite strand 430/431
(99 %)
4 diff
(99.1 %id)
DB537727 hippocampus .a 3119 to 3545 1 to 426     Submitted on the opposite strand 426/427
(99 %)
9 diff
(97.9 %id)
AI422129 brain, glioblastoma (pooled) .a 3120 to 3542 422 to 1       422/431
(97 %)
1 diff
(99.8 %id)
DB534440 hippocampus .a 3126 to 3389 1 to 266     Submitted on the opposite strand 266/268
(99 %)
6 diff
(97.8 %id)
BF197060 brain, glioblastoma (pooled) .a 3129 to 3542 414 to 1       414/414
(100 %)
2 diff
(99.6 %id)
CB048124 Prostate .a 3134 to 3391 20 to 280   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 261/280
(93 %)
6 diff
(97.9 %id)
DB533229 hippocampus .a 3138 to 3545 1 to 409   tiling clone, Submitted on the opposite strand 409/410
(99 %)
11 diff
(97.4 %id)
DB533738 hippocampus .a 3138 to 3541 1 to 407     Submitted on the opposite strand 407/407
(100 %)
7 diff
(98.3 %id)
AV724996 hypothalamus .a 3153 to 3541 1 to 389   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 389/389
(100 %)
0 diff
(100 %id)
DB532029 hippocampus .a 3156 to 3541 1 to 388     Submitted on the opposite strand 388/388
(100 %)
7 diff
(98.2 %id)
AI202311 Prostate .a 3171 to 3544 374 to 2       373/374
(99 %)
0 diff
(100 %id)
CB048123 Prostate .a 3179 to 3391 236 to 24   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 213/213
(100 %)
0 diff
(100 %id)
AI720187 colon .a 3183 to 3541 359 to 1       359/359
(100 %)
1 diff
(99.8 %id)
DB529262 hippocampus .a 3184 to 3540 1 to 362     Submitted on the opposite strand 362/363
(99 %)
18 diff
(95.1 %id)
AI908505 breast .a 3193 to 3533 8 to 348       341/361
(94 %)
4 diff
(98.9 %id)
AA757185   .a 3261 to 3544 285 to 2       284/285
(99 %)
0 diff
(100 %id)
AI913947 colon .a 3282 to 3542 261 to 1       315/357
(88 %)
11 diff
(97.0 %id)
BP193198 brain .b 1 to 588 1 to 588   tiling clone,   588/588
(100 %)
1 diff
(99.9 %id)
DC329581 corpus callosum .b 295 to 865 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC411849 kidney, tumor tissue .b 295 to 872 1 to 578       578/578
(100 %)
0 diff
(100 %id)
DC412686 kidney, tumor tissue .b 295 to 853 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DA287681 corpus callosum .b 296 to 838 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DC311482 alzheimer cortex .b 304 to 852 1 to 549       549/549
(100 %)
0 diff
(100 %id)
DC313092 amygdala .b 304 to 880 1 to 577       577/577
(100 %)
0 diff
(100 %id)
DC328647 corpus callosum .b 304 to 882 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DC337936 substantia nigra .b 304 to 879 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC353736 brain .b 304 to 912 1 to 609       609/609
(100 %)
0 diff
(100 %id)
DC320259 brain .b 306 to 867 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC327797 caudate nucleus .b 306 to 868 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC330241 hippocampus .b 306 to 870 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC339208 subthalamic nucleus .b 306 to 889 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BP213083 cerebrum .b 306 to 887 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DT216172 brain .b 308 to 932 1 to 625       625/625
(100 %)
1 diff
(99.9 %id)
CK002754 brain/CNS, Bulk tissue from Human Spinal cord .b 309 to 984 1 to 676       676/676
(100 %)
6 diff
(99.2 %id)
DC329194 corpus callosum .b 311 to 891 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC326112 caudate nucleus .b 312 to 864 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC332016 hippocampus .b 312 to 879 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC326252 caudate nucleus .b 314 to 909 1 to 596       596/596
(100 %)
2 diff
(99.7 %id)
DC311937 alzheimer cortex .b 317 to 949 1 to 633       633/633
(100 %)
1 diff
(99.9 %id)
DC311318 alzheimer cortex .b 318 to 946 1 to 629       629/629
(100 %)
2 diff
(99.7 %id)
DC313042 amygdala .b 318 to 894 1 to 577       577/577
(100 %)
0 diff
(100 %id)
DC325586 caudate nucleus .b 318 to 879 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC328052 corpus callosum .b 318 to 872 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC329890 hippocampus .b 318 to 875 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC337374 substantia nigra .b 318 to 876 1 to 559       559/559
(100 %)
0 diff
(100 %id)
BP217439 caudate nucleus .b 318 to 916 1 to 598       598/598
(100 %)
4 diff
(99.4 %id)
DC325825 caudate nucleus .b 332 to 923 1 to 594       594/594
(100 %)
2 diff
(99.7 %id)
DC326587 caudate nucleus .b 332 to 891 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC336351 substantia nigra .b 332 to 894 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC326710 caudate nucleus .b 337 to 896 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC412211 kidney, tumor tissue .b 337 to 902 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC338744 subthalamic nucleus .b 341 to 906 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC339084 subthalamic nucleus .b 360 to 931 1 to 572       572/572
(100 %)
0 diff
(100 %id)
BG705555 brain, hypothalamus .b 363 to 1023 1 to 661       659/661
(99 %)
6 diff
(99.1 %id)
BG705874 brain, hypothalamus .b 363 to 1161 1 to 798       798/800
(99 %)
26 diff
(96.8 %id)
BG707599 brain, hypothalamus .b 363 to 968 1 to 605       605/608
(99 %)
5 diff
(99.2 %id)
BG715779 brain, hypothalamus .b 363 to 1127 1 to 772       770/773
(99 %)
19 diff
(97.6 %id)
BI601943 brain, hypothalamus .b 363 to 1162 1 to 800       800/944
(84 %)
12 diff
(98.8 %id)
BI603286 brain, hypothalamus .b 363 to 1075 1 to 718       718/885
(81 %)
16 diff
(98.2 %id)
BI599187 brain, hypothalamus .b 363 to 1162 1 to 799       799/984
(81 %)
18 diff
(98.2 %id)
TI_45209686   .b 364 to 1162 122 to 920   AAA   799/1057
(75 %)
13 diff
(98.8 %id)
TI_45214970   .b 364 to 1162 155 to 952       798/1137
(70 %)
20 diff
(98.3 %id)
BG700881 brain, hippocampus .b 365 to 1125 1 to 762       762/764
(99 %)
11 diff
(98.6 %id)
DC311307 alzheimer cortex .b 368 to 1008 1 to 641       641/641
(100 %)
3 diff
(99.6 %id)
BP216268 corpus callosum .b 368 to 974 1 to 607       607/607
(100 %)
2 diff
(99.7 %id)
BI545154 brain, hippocampus .b 368 to 1051 1 to 683       683/683
(100 %)
5 diff
(99.3 %id)
DT215597 brain .b 369 to 1017 1 to 649       649/649
(100 %)
3 diff
(99.6 %id)
DC304145 cerebellum .b 370 to 963 1 to 594       594/594
(100 %)
1 diff
(99.9 %id)
DC319696 brain .b 370 to 965 1 to 596       596/596
(100 %)
2 diff
(99.7 %id)
DC341930 thalamus .b 370 to 963 1 to 594       594/594
(100 %)
0 diff
(100 %id)
BP214198 corpus callosum .b 370 to 987 1 to 617       615/617
(99 %)
3 diff
(99.6 %id)
DC341935 thalamus .b 371 to 962 1 to 592       592/592
(100 %)
0 diff
(100 %id)
BP347796 brain .b 371 to 957 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DC311918 alzheimer cortex .b 372 to 1017 1 to 646       646/646
(100 %)
2 diff
(99.7 %id)
BP214243 corpus callosum .b 372 to 995 1 to 626       626/626
(100 %)
5 diff
(99.3 %id)
BP199151 brain .b 373 to 969 1 to 598       597/598
(99 %)
3 diff
(99.5 %id)
AK295318 caudate nucleus .b 373 to 1800 1 to 1428   tiling clone,   1428/1428
(100 %)
0 diff
(100 %id)
DC304765 cerebellum .b 373 to 961 1 to 589       589/589
(100 %)
0 diff
(100 %id)
DC305920 cerebellum .b 373 to 960 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DC327554 caudate nucleus .b 373 to 1004 1 to 632       632/632
(100 %)
0 diff
(100 %id)
DC337522 substantia nigra .b 373 to 958 1 to 586       586/586
(100 %)
0 diff
(100 %id)
TI_44001200   .b 373 to 1051 89 to 766       678/766
(88 %)
6 diff
(99.3 %id)
BX463597 adult brain, brain .b 399 to 1163 9 to 773       765/773
(98 %)
3 diff
(99.7 %id)
AK294135 alzheimer cortex .b 788 to 2114 1 to 1327   tiling clone,   1327/1327
(100 %)
1 diff
(100.0 %id)
DC312474 alzheimer cortex .b 788 to 1328 1 to 541       541/541
(100 %)
0 diff
(100 %id)
BC024044 Colon, adenocarcinoma .c 1 to 2583 1 to 2581 D195* tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2581/2581
(100 %)
4 diff
(99.9 %id)
BX419743 brain, fetal brain .c 617 to 1709 1 to 1086   tiling clone,   1086/1089
(99 %)
17 diff
(98.5 %id)
BP199947 amygdala .d 1 to 582 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC303572 cerebellum .d 1 to 576 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC303664 cerebellum .d 1 to 565 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC305663 cerebellum .d 1 to 502 1 to 502       502/502
(100 %)
0 diff
(100 %id)
DC311708 alzheimer cortex .d 1 to 556 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC312125 alzheimer cortex .d 1 to 568 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC312180 alzheimer cortex .d 1 to 548 1 to 548       548/548
(100 %)
0 diff
(100 %id)
DC312448 alzheimer cortex .d 1 to 573 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC316043 amygdala .d 1 to 534 1 to 534       534/534
(100 %)
0 diff
(100 %id)
DC319495 brain .d 1 to 588 1 to 588   tiling clone,   588/588
(100 %)
0 diff
(100 %id)
DC319909 brain .d 1 to 571 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC325962 caudate nucleus .d 1 to 563 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC326242 caudate nucleus .d 1 to 498 1 to 498       498/498
(100 %)
0 diff
(100 %id)
DC326756 caudate nucleus .d 1 to 562 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC326780 caudate nucleus .d 1 to 557 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC327166 caudate nucleus .d 1 to 564 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC327528 caudate nucleus .d 1 to 556 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC328202 corpus callosum .d 1 to 561 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC328915 corpus callosum .d 1 to 537 1 to 537       537/537
(100 %)
0 diff
(100 %id)
DC328959 corpus callosum .d 1 to 572 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC330030 hippocampus .d 1 to 584 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DC337082 substantia nigra .d 1 to 553 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC337308 substantia nigra .d 1 to 585 1 to 585       585/585
(100 %)
0 diff
(100 %id)
DC337482 substantia nigra .d 1 to 573 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC337510 substantia nigra .d 1 to 585 1 to 585       585/585
(100 %)
0 diff
(100 %id)
DC338064 subthalamic nucleus .d 1 to 566 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC338324 subthalamic nucleus .d 1 to 563 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC338500 subthalamic nucleus .d 1 to 550 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC339105 subthalamic nucleus .d 1 to 572 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC341762 thalamus .d 1 to 572 1 to 572       572/572
(100 %)
0 diff
(100 %id)
BP217248 corpus callosum .d 1 to 584 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP217291 corpus callosum .d 1 to 582 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DB472051 hippocampus .d 1 to 487 1 to 487       487/487
(100 %)
0 diff
(100 %id)
BI457979 brain, hypothalamus .d 1 to 856 1 to 852       852/852
(100 %)
16 diff
(98.2 %id)
DC411636 kidney, tumor tissue .d 1 to 576 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC411652 kidney, tumor tissue .d 1 to 585 1 to 585       585/585
(100 %)
0 diff
(100 %id)
DC411835 kidney, tumor tissue .d 1 to 571 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC302787 cerebellum .d 2 to 568 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC311683 alzheimer cortex .d 2 to 556 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC312573 alzheimer cortex .d 2 to 562 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC326115 caudate nucleus .d 2 to 546 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC327624 caudate nucleus .d 2 to 563 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC329677 corpus callosum .d 2 to 573 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC338610 subthalamic nucleus .d 2 to 542 1 to 541       541/541
(100 %)
0 diff
(100 %id)
DC339151 subthalamic nucleus .d 2 to 580 1 to 579       579/579
(100 %)
0 diff
(100 %id)
AK311215 corpus callosum .d 3 to 851 1 to 848       848/848
(100 %)
1 diff
(99.9 %id)
DC302897 cerebellum .d 3 to 556 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC303813 cerebellum .d 3 to 578 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC304954 cerebellum .d 3 to 576 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC311203 alzheimer cortex .d 3 to 573 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC311371 alzheimer cortex .d 3 to 567 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC312671 alzheimer cortex .d 3 to 531 1 to 529       529/529
(100 %)
0 diff
(100 %id)
DC314632 amygdala .d 3 to 575 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC316153 amygdala .d 3 to 563 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC319266 brain .d 3 to 582 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC319541 brain .d 3 to 581 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DC319879 brain .d 3 to 578 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC320210 brain .d 3 to 575 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC325639 caudate nucleus .d 3 to 581 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DC325750 caudate nucleus .d 3 to 587 1 to 585       585/585
(100 %)
0 diff
(100 %id)
DC326039 caudate nucleus .d 3 to 574 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC326220 caudate nucleus .d 3 to 576 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC326230 caudate nucleus .d 3 to 565 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC326661 caudate nucleus .d 3 to 508 1 to 506       506/506
(100 %)
0 diff
(100 %id)
DC326931 caudate nucleus .d 3 to 580 1 to 578       578/578
(100 %)
0 diff
(100 %id)
DC328767 corpus callosum .d 3 to 588 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
DC329422 corpus callosum .d 3 to 500 1 to 498       498/498
(100 %)
0 diff
(100 %id)
DC329868 hippocampus .d 3 to 558 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC333537 hippocampus .d 3 to 490 1 to 488       488/488
(100 %)
0 diff
(100 %id)
DC336438 substantia nigra .d 3 to 570 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC336507 substantia nigra .d 3 to 547 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC336604 substantia nigra .d 3 to 497 1 to 495       495/495
(100 %)
0 diff
(100 %id)
DC336789 substantia nigra .d 3 to 576 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC336869 substantia nigra .d 3 to 567 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC337006 substantia nigra .d 3 to 566 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC337245 substantia nigra .d 3 to 544 1 to 542       542/542
(100 %)
0 diff
(100 %id)
DC337324 substantia nigra .d 3 to 585 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DC337525 substantia nigra .d 3 to 572 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC337530 substantia nigra .d 3 to 587 1 to 585       585/585
(100 %)
0 diff
(100 %id)
DC337758 substantia nigra .d 3 to 577 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC338243 subthalamic nucleus .d 3 to 559 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC338505 subthalamic nucleus .d 3 to 565 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC338807 subthalamic nucleus .d 3 to 559 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC343438 thalamus .d 3 to 568 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC411383 kidney, tumor tissue .d 3 to 577 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC411485 kidney, tumor tissue .d 3 to 568 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC411715 kidney, tumor tissue .d 3 to 554 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC411718 kidney, tumor tissue .d 3 to 566 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC412061 kidney, tumor tissue .d 3 to 558 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC412097 kidney, tumor tissue .d 3 to 572 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC325682 caudate nucleus .d 4 to 570 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC328011 corpus callosum .d 4 to 565 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC333357 hippocampus .d 4 to 546 1 to 543       543/543
(100 %)
0 diff
(100 %id)
DC337392 substantia nigra .d 4 to 570 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC338433 subthalamic nucleus .d 4 to 565 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC338699 subthalamic nucleus .d 4 to 553 1 to 550       550/550
(100 %)
0 diff
(100 %id)
BP215218 corpus callosum .d 4 to 584 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC315413 amygdala .d 5 to 588 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
BP210689 cerebellum .d 5 to 588 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
BP215151 corpus callosum .d 5 to 586 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DC302637 cerebellum .d 6 to 576 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC305702 cerebellum .d 6 to 573 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC311029 alzheimer cortex .d 6 to 574 1 to 569       569/569
(100 %)
0 diff
(100 %id)
DC311410 alzheimer cortex .d 6 to 567 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC311474 alzheimer cortex .d 6 to 553 1 to 548       548/548
(100 %)
0 diff
(100 %id)
DC312398 alzheimer cortex .d 6 to 566 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC312959 amygdala .d 6 to 573 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC314950 amygdala .d 6 to 567 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC316179 amygdala .d 6 to 579 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC319101 brain .d 6 to 532 1 to 527       527/527
(100 %)
0 diff
(100 %id)
DC319187 brain .d 6 to 576 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC319304 brain .d 6 to 576 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC319604 brain .d 6 to 588 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DC319613 brain .d 6 to 588 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DC325800 caudate nucleus .d 6 to 576 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC326550 caudate nucleus .d 6 to 569 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC326973 caudate nucleus .d 6 to 560 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC328554 corpus callosum .d 6 to 560 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC328657 corpus callosum .d 6 to 571 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC328744 corpus callosum .d 6 to 552 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DC328996 corpus callosum .d 6 to 575 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC329111 corpus callosum .d 6 to 563 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC329224 corpus callosum .d 6 to 554 1 to 549       549/549
(100 %)
0 diff
(100 %id)
DC329588 corpus callosum .d 6 to 577 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC329771 corpus callosum .d 6 to 564 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC330167 hippocampus .d 6 to 576 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC330281 hippocampus .d 6 to 575 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC336400 substantia nigra .d 6 to 567 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC336552 substantia nigra .d 6 to 574 1 to 569       569/569
(100 %)
0 diff
(100 %id)
DC337197 substantia nigra .d 6 to 564 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC337229 substantia nigra .d 6 to 556 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DC337271 substantia nigra .d 6 to 571 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC337512 substantia nigra .d 6 to 582 1 to 577       577/577
(100 %)
0 diff
(100 %id)
DC338288 subthalamic nucleus .d 6 to 561 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC338739 subthalamic nucleus .d 6 to 560 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC338783 subthalamic nucleus .d 6 to 553 1 to 548       548/548
(100 %)
0 diff
(100 %id)
DC339378 subthalamic nucleus .d 6 to 553 1 to 548       548/548
(100 %)
0 diff
(100 %id)
BP208909 cerebellum .d 6 to 586 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BP212158 cerebrum .d 6 to 588 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP216182 corpus callosum .d 6 to 588 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DB471964 hippocampus .d 6 to 500 1 to 495       495/495
(100 %)
0 diff
(100 %id)
BP307399 brain .d 6 to 588 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
BP310314 brain .d 6 to 587 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC411267 kidney, tumor tissue .d 6 to 561 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC412339 kidney, tumor tissue .d 6 to 560 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC412550 kidney, tumor tissue .d 6 to 578 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC412591 kidney, tumor tissue .d 6 to 555 1 to 550       550/550
(100 %)
0 diff
(100 %id)
BP215970 corpus callosum .d 8 to 589 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DC412310 kidney, tumor tissue .d 9 to 558 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC328970 corpus callosum .d 12 to 588 1 to 577       577/577
(100 %)
0 diff
(100 %id)
DC320098 brain .d 28 to 586 1 to 559       559/559
(100 %)
0 diff
(100 %id)
EB387261 eye, optic nerve .d 31 to 839 1 to 810       810/810
(100 %)
1 diff
(99.9 %id)
AK316038 corpus callosum .d 113 to 1494 1 to 1382   tiling clone,   1382/1382
(100 %)
2 diff
(99.9 %id)
CD252312 White Matter .d 240 to 795 76 to 643       578/1034
(55 %)
70 diff
(93.3 %id)
AI904532 breast .d 311 to 646 1 to 336       336/336
(100 %)
1 diff
(99.8 %id)
BF919392 nervous_tumor .d 339 to 564 1 to 226       226/226
(100 %)
0 diff
(100 %id)
AI825504 pooled germ cell tumors .d 660 to 1269 621 to 11       611/621
(98 %)
11 diff
(98.3 %id)
DC338911 subthalamic nucleus .e 1 to 564 1 to 564   tiling clone,   564/564
(100 %)
0 diff
(100 %id)
CR749643 amygdala .e 262 to 5967 1 to 5718 G119D S305P tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 5718/5719
(99 %)
14 diff
(99.8 %id)
AA626177   .e 1945 to 2437 494 to 2   tiling clone,   493/494
(99 %)
0 diff
(100 %id)
DA226785 brain .e 2213 to 2765 2 to 555   tiling clone, capped   554/554
(100 %)
4 diff
(99.3 %id)
BX645051   .e 3702 to 4433 1 to 730   tiling clone,   730/731
(99 %)
6 diff
(99.2 %id)
N51218 multiple sclerosis lesions .e 3831 to 4070 1 to 240       240/241
(99 %)
2 diff
(99.2 %id)
DA136472 alzheimer cortex .e 4393 to 4940 2 to 550   tiling clone, capped   549/549
(100 %)
2 diff
(99.7 %id)
AW902354 nervous_normal .e 5225 to 5600 380 to 3   tiling clone,   378/380
(99 %)
0 diff
(100 %id)
BF364183 nervous_normal .e 5258 to 5602 348 to 1   tiling clone,   348/348
(100 %)
7 diff
(98.0 %id)
DB305243 brain .e 5424 to 5967 545 to 1   tiling clone,   545/545
(100 %)
2 diff
(99.7 %id)
AW902355 nervous_normal .e 5620 to 5964 351 to 7   tiling clone,   345/351
(98 %)
0 diff
(100 %id)
AK294150 alzheimer cortex .f 1 to 1337 1 to 1337 exact tiling clone,   1337/1337
(100 %)
0 diff
(100 %id)
BG261180 bladder, transitional cell papilloma, cell line .g 1 to 816 1 to 808 W96G K98S S99Q V100L E102R ... tiling clone,   808/965
(83 %)
23 diff
(97.7 %id)
DC326092 caudate nucleus .h 1 to 553 1 to 553   tiling clone,   553/553
(100 %)
1 diff
(99.9 %id)
BM789710 stomach .h 397 to 857 81 to 541   tiling clone,   463/541
(85 %)
7 diff
(98.8 %id)
BE305008 adenocarcinoma cell line, colon .i 1 to 755 776 to 8 I2K K3S S4P K5R E6R ... tiling clone,   769/906
(84 %)
23 diff
(97.5 %id)
DC388314 small intestine .j 1 to 280 1 to 280   tiling clone,   280/280
(100 %)
2 diff
(99.3 %id)
DC358921 lung .j 2 to 514 1 to 513 exact tiling clone,   513/513
(100 %)
0 diff
(100 %id)
BI668439 brain, hypothalamus .k 1 to 782 1 to 778 K2R D9I T11R L12F L13S ... tiling clone,   778/779
(99 %)
17 diff
(97.9 %id)
TI_44344623   .k 8 to 782 86 to 856       771/857
(89 %)
16 diff
(98.2 %id)
AI459809 brain, oligodendroglioma .k 587 to 927 358 to 18   tiling clone, AAA   341/341
(100 %)
7 diff
(98.0 %id)
DT215608 brain .l 1 to 613 1 to 613   tiling clone,   613/613
(100 %)
0 diff
(100 %id)
BF478222 pooled germ cell tumors .l 84 to 544 461 to 1       461/461
(100 %)
6 diff
(98.7 %id)
AL120048 amygdala .l 125 to 730 1 to 607 exact     607/610
(99 %)
4 diff
(99.4 %id)
DR422306 eye, Pterygium .l 138 to 715 1 to 578 exact     578/578
(100 %)
2 diff
(99.7 %id)
AW140043   .l 161 to 545 400 to 16   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 385/400
(96 %)
1 diff
(99.8 %id)
BE769726 prostate_tumor .l 168 to 480 325 to 13       313/328
(95 %)
5 diff
(98.5 %id)
TI_1520873293   .l 185 to 972 918 to 133 R7E D8T L9* tiling clone,   786/922
(85 %)
9 diff
(99.1 %id)
BE765229 nervous_tumor .l 194 to 666 18 to 490 exact     473/492
(96 %)
13 diff
(97.4 %id)
AA079436   .l 217 to 602 1 to 396       396/396
(100 %)
12 diff
(97.0 %id)
CD617341   .l 233 to 710 20 to 497 exact     478/497
(96 %)
6 diff
(98.8 %id)
BE825197 colon_normal .l 254 to 677 436 to 13 Y78H     424/441
(96 %)
5 diff
(98.9 %id)
AW602108 breast .l 267 to 669 21 to 423 exact     403/433
(93 %)
9 diff
(98.0 %id)
AW888409 nervous_tumor .l 311 to 654 22 to 365       344/365
(94 %)
6 diff
(98.4 %id)
AA079342   .l 933 to 1329 396 to 1   tiling clone,   396/396
(100 %)
6 diff
(98.5 %id)
AK304213 trachea .m 1 to 1160 1 to 1160 exact tiling clone,   1160/1160
(100 %)
1 diff
(100.0 %id)
DC416998 trachea .m 1 to 582 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA243943 brain .n-u 1 to 602 2 to 602 exact tiling clone, capped   601/601
(100 %)
2 diff
(99.7 %id)
DA400193 thalamus .o-u 1 to 566 2 to 567 exact tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
DN920751   .p-u 1 to 302 1 to 302   tiling clone,   302/302
(100 %)
2 diff
(99.4 %id)
BQ320066 colon .p-u 87 to 529 498 to 56 exact tiling clone,   443/504
(87 %)
0 diff
(100 %id)
BE827751 lung_tumor .q 1 to 434 1 to 435 A43T tiling clone,   435/441
(98 %)
14 diff
(96.9 %id)
DB526134 testis .r 1 to 426 1 to 426 exact tiling clone, Submitted on the opposite strand 426/426
(100 %)
0 diff
(100 %id)
AK225656 stomach mucosa Gene BCAS1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
TI_1520872581   Gene BCAS1, variant not shown         Submitted on the opposite strand    
DB299266 cerebellum Gene BCAS1, variant not shown              
DA102842 cerebellum Gene BCAS1, variant not shown       capped      
DA242013 brain Gene BCAS1, variant not shown       capped      
DA247654 brain Gene BCAS1, variant not shown       capped      
DB306771 caudate nucleus Gene BCAS1, variant not shown              
DA263870 caudate nucleus Gene BCAS1, variant not shown       capped      
DB308529 hippocampus Gene BCAS1, variant not shown              
DA312120 hippocampus Gene BCAS1, variant not shown       capped      
DA324051 hippocampus Gene BCAS1, variant not shown       capped      
DA337851 hippocampus Gene BCAS1, variant not shown       capped      
DA410299 thalamus Gene BCAS1, variant not shown       capped      
208 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o-u, .p-u, .q, .r Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI