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Gene BBS7TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
157 supporting clones for gene BBS7 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AL705447 human skeletal muscle .a -11 to 457 1 to 469       469/469
(100 %)
0 diff
(100 %id)
BI596633 brain, hypothalamus .a -8 to 664 1 to 671       671/671
(100 %)
6 diff
(99.2 %id)
BF090299 nervous_normal .a 1 to 385 26 to 410       393/410
(95 %)
6 diff
(98.6 %id)
TI_45209061   .a 1 to 664 98 to 759       670/759
(88 %)
8 diff
(99.0 %id)
DA706442   .a 1 to 489 4 to 493   capped   492/492
(100 %)
1 diff
(99.8 %id)
DB128445 thymus .a 1 to 558 4 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB489955 hypothalamus .a 1 to 436 1 to 435       438/435
(100 %)
11 diff
(97.5 %id)
DB496482 hypothalamus .a 1 to 481 1 to 481       481/481
(100 %)
1 diff
(99.8 %id)
DB499867 hypothalamus .a 1 to 494 1 to 494       494/494
(100 %)
1 diff
(99.8 %id)
DB164467 thymus .a 1 to 573 2 to 574   tiling clone, capped   573/573
(100 %)
0 diff
(100 %id)
DB467668 hippocampus .a 2 to 421 1 to 420       420/420
(100 %)
1 diff
(99.8 %id)
DB468352 hippocampus .a 2 to 432 1 to 430       430/430
(100 %)
3 diff
(99.4 %id)
DB482591 hippocampus .a 2 to 489 1 to 488       488/488
(100 %)
1 diff
(99.8 %id)
DN994016 brain, whole brain .a 2 to 681 1 to 680       680/680
(100 %)
5 diff
(99.3 %id)
BI824960 pooled brain, lung, testis .a 3 to 682 31 to 726       696/917
(75 %)
41 diff
(95.6 %id)
TI_57196569   .a 3 to 682 31 to 726   AAA   696/899
(77 %)
41 diff
(95.5 %id)
BU160062 leiomyosarcoma, uterus .a 7 to 721 1 to 717       717/911
(78 %)
9 diff
(99.1 %id)
TI_57238144   .a 15 to 735 27 to 747       721/747
(96 %)
7 diff
(99.1 %id)
BI912874 brain .a 18 to 735 1 to 718       718/718
(100 %)
3 diff
(99.6 %id)
AA033824 heart .a 24 to 434 414 to 1       414/422
(98 %)
10 diff
(97.7 %id)
N92198 multiple sclerosis lesions .a 25 to 470 1 to 443       446/495
(90 %)
6 diff
(98.8 %id)
DN992370 brain, whole brain .a 36 to 617 5 to 586       582/586
(99 %)
6 diff
(99.0 %id)
TI_1948140480   .a 112 to 932 123 to 945       823/1325
(62 %)
38 diff
(97.2 %id)
TI_1948141153   .a 112 to 966 121 to 974       854/1346
(63 %)
27 diff
(98.0 %id)
TI_1948141486   .a 112 to 460 118 to 467       350/1394
(25 %)
9 diff
(99.4 %id)
TI_1948141487   .a 112 to 963 119 to 977       859/1493
(57 %)
23 diff
(98.5 %id)
TI_1948140812   .a 113 to 840 141 to 868       728/1473
(49 %)
33 diff
(97.8 %id)
CV030743 mixed .a 119 to 702 1 to 584       584/584
(100 %)
0 diff
(100 %id)
AF521644   .a 155 to 2858 185 to 2888 Q469L tiling clone,   2877/2888
(99 %)
7 diff
(99.8 %id)
AK308076   .a 155 to 2566 212 to 2621 G294W G295L V297R G298K K299R ... tiling clone,   2621/2621
(100 %)
1 diff
(100.0 %id)
DA290692 hippocampus .a 155 to 543 174 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA386781 thalamus .a 155 to 566 183 to 594   capped   593/593
(100 %)
1 diff
(99.9 %id)
AL528698 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 155 to 973 177 to 990       990/1048
(94 %)
12 diff
(98.9 %id)
BX479600   .a 155 to 440 187 to 472       472/472
(100 %)
1 diff
(99.8 %id)
AL712963 human skeletal muscle .a 155 to 512 184 to 540       540/540
(100 %)
2 diff
(99.7 %id)
AL712966 human skeletal muscle .a 155 to 571 184 to 600       600/600
(100 %)
2 diff
(99.7 %id)
BX510161   .a 155 to 617 222 to 684       684/684
(100 %)
1 diff
(99.9 %id)
BX491325   .a 155 to 624 208 to 677       677/677
(100 %)
5 diff
(99.3 %id)
AL710947 human skeletal muscle .a 155 to 827 182 to 863       860/873
(98 %)
14 diff
(98.4 %id)
DB471887 hippocampus .a 155 to 470 184 to 499       499/499
(100 %)
1 diff
(99.8 %id)
DA553048   .a 155 to 527 203 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BG720664 testis .a 155 to 665 216 to 725       725/725
(100 %)
9 diff
(98.8 %id)
BG720363 testis .a 155 to 555 216 to 615       615/615
(100 %)
6 diff
(99.1 %id)
BG717837 testis .a 155 to 736 200 to 777       779/777
(100 %)
13 diff
(98.4 %id)
BG723685 testis .a 155 to 580 188 to 613       613/613
(100 %)
6 diff
(99.1 %id)
BQ226004 embryonal carcinoma, cell line, testis .a 155 to 850 176 to 884       881/915
(96 %)
20 diff
(97.9 %id)
DA648799   .a 155 to 527 198 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
NM_176824.1   .a 155 to 3622 211 to 3678 exact RefSeq, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 3678/3678
(100 %)
0 diff
(100 %id)
DA722282   .a 155 to 511 212 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB073997 testis .a 155 to 524 174 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB074342 testis .a 155 to 521 171 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DB088350 testis .a 155 to 531 183 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA190943 amygdala .a 317 to 893 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA474851   .a 523 to 1075 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
CN426519 embryonic stem cells, DMSO-treated H9 cellline .a 621 to 1032 1 to 412       412/412
(100 %)
5 diff
(98.8 %id)
BM454688 embryonal carcinoma, cell line, testis .a 773 to 1678 1 to 910       910/1008
(90 %)
7 diff
(99.4 %id)
BI045646 prostate_normal .a 885 to 1402 1 to 519       519/519
(100 %)
16 diff
(97.0 %id)
BG107742 Bone, osteosarcoma, cell line .a 1010 to 1798 1 to 790       790/835
(94 %)
27 diff
(96.8 %id)
FN110224 breast carcinoma .a 1116 to 1198 1 to 82       82/83
(98 %)
2 diff
(97.6 %id)
TI_1948141154   .a 1139 to 2143 1121 to 117       1005/1360
(73 %)
56 diff
(95.9 %id)
AA343817 gall bladder .a 1167 to 1379 1 to 213       213/214
(99 %)
1 diff
(99.6 %id)
AA344243 gall bladder .a 1167 to 1444 1 to 278       278/278
(100 %)
2 diff
(99.3 %id)
AW965073   .a 1168 to 1823 1 to 656       656/656
(100 %)
0 diff
(100 %id)
TI_1948140481   .a 1172 to 2143 1088 to 118       971/1311
(74 %)
59 diff
(95.5 %id)
AA215874   .a 1205 to 1520 1 to 316       316/316
(100 %)
0 diff
(100 %id)
TI_1948141488   .a 1210 to 2143 1052 to 123       930/1340
(69 %)
20 diff
(98.6 %id)
TI_1948141489   .a 1335 to 2143 940 to 130       811/1329
(61 %)
9 diff
(99.4 %id)
CN482651 eye .a 1629 to 1768 1 to 140       140/140
(100 %)
0 diff
(100 %id)
TI_1948140482   .a 1629 to 2143 641 to 122       520/1472
(35 %)
13 diff
(99.2 %id)
BU172979 leiomyosarcoma, uterus .a 1901 to 2759 1 to 860       860/860
(100 %)
3 diff
(99.7 %id)
CF140847 CNCAP(3)T-225 cell line, Prostate .a 1997 to 2444 4 to 451       448/451
(99 %)
6 diff
(98.7 %id)
TI_154171480   .a 2000 to 2758 79 to 850       772/916
(84 %)
46 diff
(95.0 %id)
AA249122   .a 2083 to 2224 1 to 141       141/141
(100 %)
2 diff
(98.6 %id)
N34716 melanocyte .a 2089 to 2518 1 to 435       435/443
(98 %)
8 diff
(98.2 %id)
N28975 melanocyte .a 2105 to 2464 1 to 360       360/361
(99 %)
1 diff
(99.8 %id)
BG497860 adenocarcinoma, Prostate .a 2154 to 2894 1 to 742       742/934
(79 %)
22 diff
(97.7 %id)
BM465414 eye, retinoblastoma .a 2208 to 2863 1 to 657       657/1112
(59 %)
6 diff
(99.5 %id)
CB145277 Liver .a 2370 to 2684 1 to 315       315/317
(99 %)
4 diff
(98.8 %id)
BF674577 Prostate .a 2385 to 3114 1 to 719       719/751
(95 %)
49 diff
(93.5 %id)
BE738017 brain, glioblastoma .a 2478 to 3117 1 to 642       642/643
(99 %)
15 diff
(97.7 %id)
AA055095 heart .a 2497 to 2893 1 to 401       401/401
(100 %)
5 diff
(98.8 %id)
BF030299 hypernephroma, Kidney .a 2502 to 2965 1 to 460       460/688
(66 %)
13 diff
(98.2 %id)
BU619691 Cell Line, Chondrosarcoma .a 2681 to 3366 702 to 19   tiling clone, AAA   684/684
(100 %)
4 diff
(99.5 %id)
TI_154050534   .a 2746 to 3646 981 to 94       888/1106
(80 %)
0 diff
(100 %id)
BF431967 pooled .a 2799 to 3366 568 to 1       568/568
(100 %)
0 diff
(100 %id)
TI_149310205   .a 2820 to 3644 908 to 89   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 820/964
(85 %)
19 diff
(98.1 %id)
AI609509 normal gingiva (cell line from immortalizedkeratinocytes) .a 2851 to 3366 516 to 1       516/516
(100 %)
0 diff
(100 %id)
BF061854 pooled germ cell tumors .a 2851 to 3366 515 to 1       515/515
(100 %)
1 diff
(99.9 %id)
BE738181 brain, glioblastoma .a 2878 to 3625 776 to 12       765/855
(89 %)
0 diff
(100 %id)
AI950861 lung, two pooled squamous cell carcinomas .a 2883 to 3347 1 to 463     Submitted on the opposite strand 463/465
(99 %)
5 diff
(99.0 %id)
BU688534 lung .a 2949 to 3644 712 to 17   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 696/696
(100 %)
3 diff
(99.6 %id)
AA774865 schizophrenic brain S-11 frontal lobe .a 2971 to 3360 388 to 1       388/388
(100 %)
4 diff
(99.0 %id)
AA586971 larynx .a 2978 to 3366 416 to 28   AAA   389/389
(100 %)
0 diff
(100 %id)
BM998707 lung, Metastatic Chondrosarcoma .a 2983 to 3646 680 to 17       664/680
(97 %)
0 diff
(100 %id)
AW002776 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2986 to 3360 387 to 13   AAA   375/375
(100 %)
0 diff
(100 %id)
CA414065 Chondrosarcoma Grade II, Left Pelvis .a 3018 to 3646 645 to 17       629/645
(97 %)
0 diff
(100 %id)
D79808 aorta .a 3067 to 3294 1 to 229       229/229
(100 %)
1 diff
(99.6 %id)
D79971 aorta .a 3067 to 3329 1 to 263       263/263
(100 %)
1 diff
(99.7 %id)
AI123593 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3075 to 3646 577 to 6   tiling clone,   572/577
(99 %)
0 diff
(100 %id)
AW264298 brain, three pooled meningiomas .a 3086 to 3644 559 to 1       559/559
(100 %)
0 diff
(100 %id)
C01814   .a 3102 to 3351 1 to 250       250/255
(98 %)
3 diff
(98.9 %id)
D62739   .a 3127 to 3351 1 to 225       225/225
(100 %)
0 diff
(100 %id)
DB540638 hippocampus .a 3156 to 3642 1 to 487     Submitted on the opposite strand 487/489
(99 %)
1 diff
(99.8 %id)
DB551450 hippocampus .a 3160 to 3644 1 to 485     Submitted on the opposite strand 485/485
(100 %)
0 diff
(100 %id)
N20583 melanocyte .a 3174 to 3644 471 to 1       471/472
(99 %)
1 diff
(99.8 %id)
DB571010 hypothalamus .a 3177 to 3644 1 to 468     Submitted on the opposite strand 468/468
(100 %)
0 diff
(100 %id)
DB567503 hypothalamus .a 3181 to 3644 1 to 464     Submitted on the opposite strand 464/464
(100 %)
0 diff
(100 %id)
DB535094 hippocampus .a 3202 to 3644 1 to 443     Submitted on the opposite strand 443/443
(100 %)
2 diff
(99.6 %id)
DB535604 hippocampus .a 3213 to 3644 1 to 431     Submitted on the opposite strand 431/432
(99 %)
3 diff
(99.4 %id)
DB534712 hippocampus .a 3229 to 3644 1 to 418     Submitted on the opposite strand 418/418
(100 %)
2 diff
(99.6 %id)
AW243512 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 3248 to 3644 397 to 1       397/397
(100 %)
4 diff
(99.0 %id)
DB139794 thymus .a 3261 to 3797 2 to 538   tiling clone, capped   537/537
(100 %)
2 diff
(99.7 %id)
AW513003 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3271 to 3644 374 to 1       374/374
(100 %)
1 diff
(99.8 %id)
AI683802 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3316 to 3685 390 to 21   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 370/370
(100 %)
7 diff
(98.2 %id)
CA444082 Fibrosarcoma .a 3358 to 3581 242 to 19   AAA   224/224
(100 %)
4 diff
(98.3 %id)
AA055068 heart .a 3409 to 3644 236 to 1       236/236
(100 %)
3 diff
(98.8 %id)
BC032691 Brain, fetal, whole pooled .b 18 to 2550 1 to 2533 exact tiling clone, available from MGC, AAA   2533/2533
(100 %)
1 diff
(100.0 %id)
AF521643   .b 155 to 2550 185 to 2580 Q469L     2569/2580
(99 %)
7 diff
(99.8 %id)
AK001577   .b 155 to 2550 185 to 2580 Q469L available from FLJ,   2568/2568
(100 %)
1 diff
(100.0 %id)
NM_018190.2   .b 155 to 2550 211 to 2606 exact RefSeq,   2606/2606
(100 %)
0 diff
(100 %id)
AU130538   .b 155 to 608 185 to 638   capped   627/637
(98 %)
8 diff
(98.8 %id)
W87404 liver and spleen .b 1382 to 1646 1 to 265       265/265
(100 %)
5 diff
(98.2 %id)
AA005036 liver and spleen .b 1383 to 1823 1 to 441       441/441
(100 %)
4 diff
(99.1 %id)
TI_154100156   .b 1867 to 2550 769 to 87   AAA   683/683
(100 %)
3 diff
(99.6 %id)
CA441205 Fibrosarcoma .b 1889 to 2550 680 to 19   AAA   662/662
(100 %)
2 diff
(99.7 %id)
AU152454   .b 2019 to 2550 530 to 1       530/532
(99 %)
12 diff
(97.8 %id)
BF223981 carcinoid, lung .b 2070 to 2550 495 to 14   AAA   482/482
(100 %)
7 diff
(98.6 %id)
W87405 liver and spleen .b 2100 to 2550 456 to 1       456/456
(100 %)
11 diff
(97.6 %id)
AI827253 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2110 to 2551 448 to 5       444/448
(99 %)
0 diff
(100 %id)
AI220177 pooled .b 2179 to 2551 381 to 9   tiling clone,   373/381
(97 %)
0 diff
(100 %id)
AI685356 pooled .b 2190 to 2551 370 to 9       362/370
(97 %)
0 diff
(100 %id)
AA004842 liver and spleen .b 2233 to 2550 320 to 1       320/320
(100 %)
5 diff
(98.5 %id)
BX092437 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2245 to 2550 320 to 15   AAA   306/317
(96 %)
1 diff
(99.7 %id)
AI499531 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2276 to 2550 308 to 34   AAA   275/275
(100 %)
1 diff
(99.7 %id)
C16544   .b 2305 to 2550 1 to 246       246/246
(100 %)
0 diff
(100 %id)
BG258280 embryonal carcinoma, cell line, testis .c 1 to 692 1 to 689 F4L E5K T6Q N7T L8S ... tiling clone,   689/802
(85 %)
24 diff
(97.1 %id)
CN278291 embryonic stem cells, DMSO-treated H9 cellline .c 200 to 362 1 to 164   tiling clone,   164/164
(100 %)
2 diff
(98.8 %id)
BG717780 testis .d 155 to 720 172 to 737 C152X C167A Q168R D169N I185N tiling clone,   737/738
(99 %)
9 diff
(98.8 %id)
BF699279 brain, primitive neuroectoderm .d 284 to 949 1 to 663   tiling clone,   663/863
(76 %)
41 diff
(95.3 %id)
BF701436 brain, primitive neuroectoderm .d 284 to 995 1 to 714   tiling clone,   714/748
(95 %)
20 diff
(97.4 %id)
BX505106   .e -8 to 666 1 to 684 L5K N6P R7N M8G D9L ... tiling clone,   684/688
(99 %)
19 diff
(97.3 %id)
BM693453 eye, Retina Foveal and Macular .e 11 to 472 6 to 467   tiling clone, fully sequenced, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 462/467
(98 %)
6 diff
(98.8 %id)
AW291392   .e 25 to 471 464 to 18   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 447/465
(96 %)
5 diff
(99.0 %id)
BE465114 carcinoid, lung .e 46 to 470 424 to 1       424/424
(100 %)
1 diff
(99.8 %id)
AI216454 pooled .e 138 to 483 348 to 3       346/348
(99 %)
1 diff
(99.8 %id)
DA033244   .e 155 to 539 185 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
CD173443 embryonic stem cells, WA01, passage 38 .e 155 to 472 228 to 545   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 527/593
(88 %)
12 diff
(98.0 %id)
DA541738 lung .e 155 to 533 211 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
BQ940332 eye, normal pigmented retinal epithelium .e 155 to 471 186 to 502       502/507
(99 %)
2 diff
(99.7 %id)
BU564492 mixed (pool of 40 RNAs) .e 155 to 472 190 to 507       507/509
(99 %)
4 diff
(99.3 %id)
DB084358 testis .e 155 to 542 183 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
BM668730 eye, Retina Foveal and Macular .e 190 to 472 301 to 19   fully sequenced, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 283/301
(94 %)
0 diff
(100 %id)
AI274295 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 213 to 473 261 to 1       261/261
(100 %)
3 diff
(98.9 %id)
CA407888 adipose .f 1 to 600 1 to 603   tiling clone,   603/645
(93 %)
6 diff
(99.1 %id)
CA405790 adipose .f 8 to 622 1 to 617       617/617
(100 %)
5 diff
(99.2 %id)
BU958838 mixed (pool of 40 RNAs) .f 551 to 1284 1 to 749 exact tiling clone,   749/750
(99 %)
28 diff
(96.3 %id)
AW847686 colon .g-u 1 to 254 155 to 408   tiling clone,   254/408
(62 %)
6 diff
(98.6 %id)
AW847538 colon .g-u 114 to 566 453 to 1 T77P tiling clone,   453/454
(99 %)
3 diff
(99.4 %id)
DA416704 thalamus .g-u 222 to 757 2 to 537 exact tiling clone, capped   536/536
(100 %)
0 diff
(100 %id)
AW898858 nervous_normal .h-u 1 to 322 323 to 3 Q30R S31L R32E tiling clone,   321/323
(99 %)
0 diff
(100 %id)
DB467943 hippocampus Gene BBS7, variant not shown         This clone was ignored    
FN066208 breast carcinoma Gene BBS7, variant not shown              
AK309803 brain Gene BBS7, variant not shown         Suspected internal deletion, this clone was ignored    
DA788972 brain Gene BBS7, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC