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Gene BANK1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
116 supporting clones for gene BANK1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_017935.4   .a 1 to 3442 2 to 3443 C650R RefSeq, AAA   3443/3443
(100 %)
1 diff
(100.0 %id)
DA109829 cerebellum .a 1 to 550 2 to 549   tiling clone, capped   548/548
(100 %)
5 diff
(99.1 %id)
DA109368 cerebellum .a 26 to 614 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA959160 Spleen .a 47 to 612 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA590878 lung .a 54 to 595 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DN994084 brain, whole brain .a 72 to 799 9 to 736       728/736
(98 %)
8 diff
(99.0 %id)
DB202743 trachea .a 72 to 654 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
BE247533 leukopheresis .a 122 to 486 1 to 365       365/365
(100 %)
3 diff
(99.2 %id)
DA819922   .a 124 to 690 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA932617 Spleen .a 124 to 695 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA949032 Spleen .a 124 to 690 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB139730 thymus .a 124 to 657 2 to 536   capped   535/535
(100 %)
3 diff
(99.5 %id)
BC032241 Blood, adult leukocytes .a 132 to 3370 1 to 3239 C650R tiling clone, available from MGC, AAA   3239/3239
(100 %)
4 diff
(99.9 %id)
BI906977 leukocyte .a 142 to 784 8 to 657       650/657
(98 %)
16 diff
(97.6 %id)
TI_57233523   .a 142 to 784 39 to 688       650/688
(94 %)
15 diff
(97.9 %id)
AK292133 synovial membrane tissue from rheumatoidarthritis .a 156 to 2635 1 to 2480 S303R C650R tiling clone,   2480/2480
(100 %)
3 diff
(99.9 %id)
DA989770 synovial membrane tissue from rheumatioidarthritis .a 157 to 685 2 to 533   capped   532/532
(100 %)
4 diff
(99.3 %id)
DA819066   .a 166 to 703 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
AL834291 lymph node .a 181 to 3370 1 to 3190 C650R available from DKFZ, AAA   3190/3190
(100 %)
4 diff
(99.9 %id)
BM549791 leukocyte .a 191 to 1020 15 to 857       843/1070
(78 %)
30 diff
(97.2 %id)
AK091523 brain .b 1 to 3543 2 to 3544 N194D A368T C635R tiling clone, available from FLJ,   3544/3544
(100 %)
9 diff
(99.8 %id)
AX747038   .b 1 to 3543 2 to 3544 N194D A368T C635R     3544/3544
(100 %)
9 diff
(99.8 %id)
DA504615 brain .b 1 to 584 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
AB063170   .b 465 to 2732 1 to 2268   tiling clone,   2268/2268
(100 %)
4 diff
(99.9 %id)
CV030392 mixed .b 465 to 1080 1 to 614       614/614
(100 %)
2 diff
(99.7 %id)
TI_1948087302   .b 465 to 1530 122 to 1188       1067/1306
(81 %)
48 diff
(96.4 %id)
TI_1948087454   .b 465 to 1478 123 to 1129       1007/1283
(78 %)
28 diff
(97.9 %id)
BE748453 bone marrow, from acute myelogenous leukemia .b 1059 to 1580 1 to 521       521/692
(75 %)
2 diff
(99.8 %id)
AA909943 pooled .b 1095 to 1576 484 to 1       484/484
(100 %)
3 diff
(99.4 %id)
BU430559 lymph .b 1305 to 1580 8 to 283       276/296
(93 %)
12 diff
(96.0 %id)
DA956345 Spleen .b 1373 to 1942 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA818672   .b 1488 to 2040 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
AI693674 pooled .b 1522 to 2053 532 to 1       532/534
(99 %)
0 diff
(100 %id)
AI018164 pooled .b 1564 to 2055 492 to 1       492/492
(100 %)
0 diff
(100 %id)
AW589800 pooled germ cell tumors .b 1564 to 2052 491 to 3       489/491
(99 %)
0 diff
(100 %id)
AA876117 germinal center B cell .b 1568 to 2065 505 to 8       498/505
(98 %)
0 diff
(100 %id)
AW408429 lymph .b 1576 to 2137 8 to 568       561/568
(98 %)
6 diff
(99.0 %id)
TI_154148045   .b 1577 to 2272 86 to 779       694/701
(99 %)
12 diff
(98.3 %id)
AA761118 germinal center B cell .b 1594 to 2060 472 to 5       468/472
(99 %)
0 diff
(100 %id)
AA885370 pooled .b 1603 to 2063 461 to 1       461/461
(100 %)
1 diff
(99.8 %id)
AI656515 pooled germ cell tumors .b 1610 to 2055 446 to 1       446/446
(100 %)
2 diff
(99.6 %id)
AI968716 pooled germ cell tumors .b 1628 to 2057 432 to 3       430/432
(99 %)
0 diff
(100 %id)
AA830743 germinal center B cell .b 1652 to 2065 421 to 8       414/455
(90 %)
4 diff
(99.2 %id)
AW139529   .b 1664 to 2069 407 to 2   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 406/407
(99 %)
1 diff
(99.8 %id)
AW402219 lymph .b 1770 to 2235 1 to 466       466/466
(100 %)
4 diff
(99.2 %id)
AA732383 germinal center B cell .b 1771 to 2060 294 to 5       290/294
(98 %)
0 diff
(100 %id)
TI_154138540   .b 1777 to 2274 89 to 586       498/511
(97 %)
0 diff
(100 %id)
TI_1948087455   .b 1779 to 2736 1087 to 135       953/1396
(68 %)
43 diff
(97.0 %id)
DN917642   .b 1787 to 1922 1 to 136       136/136
(100 %)
1 diff
(99.3 %id)
CD708022 normal nasopharynx .b 1805 to 1912 23 to 130       108/130
(83 %)
8 diff
(93.9 %id)
TI_1948087158   .b 1820 to 2736 1033 to 124       910/1338
(68 %)
28 diff
(98.0 %id)
BQ358521 head_neck .b 1966 to 2131 169 to 3       167/179
(93 %)
0 diff
(100 %id)
BX112689   .b 1966 to 2722 1 to 758       758/758
(100 %)
4 diff
(99.5 %id)
TI_1948087303   .b 1968 to 2736 902 to 134       769/1439
(53 %)
5 diff
(99.7 %id)
AA393078   .b 1999 to 2445 1 to 447       447/447
(100 %)
1 diff
(99.8 %id)
AK301936 testis .b 2052 to 3082 231 to 1261       1031/1261
(81 %)
5 diff
(99.7 %id)
DB032288 testis .b 2052 to 2418 232 to 598   capped   367/597
(61 %)
1 diff
(99.9 %id)
BE882221 leiomyosarcoma, uterus .b 2077 to 2849 1 to 770       770/1112
(69 %)
27 diff
(97.6 %id)
BG217237   .b 2275 to 3105 1 to 816       816/817
(99 %)
44 diff
(94.7 %id)
CD706163 normal nasopharynx .b 2306 to 2633 38 to 365       328/365
(89 %)
9 diff
(97.6 %id)
BF508911   .b 2333 to 2942 627 to 18   AAA   610/610
(100 %)
1 diff
(99.9 %id)
BG204059   .b 2348 to 2938 592 to 3     Submitted on the opposite strand 590/597
(98 %)
8 diff
(98.7 %id)
TI_57165063   .b 2400 to 3106 24 to 737       714/898
(79 %)
44 diff
(95.2 %id)
BI838657 pooled pancreas and spleen .b 2405 to 3106 1 to 709       709/870
(81 %)
44 diff
(95.0 %id)
DN917641   .b 2419 to 2924 506 to 1       506/506
(100 %)
5 diff
(99.1 %id)
BU188057 testis .b 2466 to 3286 1 to 825       825/825
(100 %)
12 diff
(98.6 %id)
BG201324   .b 2517 to 3299 1 to 782       782/782
(100 %)
13 diff
(98.4 %id)
AA814890 germinal center B cell .b 2543 to 2942 415 to 16   AAA   400/400
(100 %)
0 diff
(100 %id)
BG181844   .b 2544 to 3348 1 to 795       795/798
(99 %)
44 diff
(94.5 %id)
BG182866   .b 2544 to 2947 8 to 411       404/425
(95 %)
11 diff
(97.5 %id)
BE247021 leukopheresis .b 2562 to 2946 386 to 2       385/386
(99 %)
0 diff
(100 %id)
BG186023   .b 2624 to 3401 13 to 789       777/791
(98 %)
15 diff
(98.2 %id)
BE748761 bone marrow, from acute myelogenous leukemia .b 2648 to 3418 778 to 6       773/779
(99 %)
8 diff
(99.0 %id)
BG200452   .b 2668 to 3451 1 to 788       788/791
(99 %)
37 diff
(95.4 %id)
TI_154132216   .b 2739 to 3465 840 to 105   AAA   736/765
(96 %)
18 diff
(97.7 %id)
BG611146 adenocarcinoma, Prostate .b 2838 to 3470 1 to 636       636/963
(66 %)
7 diff
(99.3 %id)
AW574859 lymph .b 2946 to 3465 537 to 18   AAA   520/520
(100 %)
0 diff
(100 %id)
AI684654 pooled .b 3000 to 3471 472 to 1       472/472
(100 %)
0 diff
(100 %id)
DB316032 brain .b 3012 to 3543 533 to 1       533/533
(100 %)
3 diff
(99.5 %id)
BF514276   .b 3017 to 3471 472 to 18   AAA   455/455
(100 %)
0 diff
(100 %id)
AW769825 lymph node, lymphoma, follicular mixed small and largecell .b 3038 to 3465 438 to 11   AAA   428/428
(100 %)
0 diff
(100 %id)
AI968489 pooled germ cell tumors .b 3039 to 3471 433 to 1       433/433
(100 %)
1 diff
(99.8 %id)
AW130094 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 3041 to 3471 451 to 21   AAA   431/431
(100 %)
7 diff
(98.4 %id)
AI692787 adenocarcinoma, Pancreas .b 3049 to 3472 426 to 3   tiling clone,   424/426
(99 %)
0 diff
(100 %id)
AA809784 germinal center B cell .b 3056 to 3471 432 to 17   AAA   416/416
(100 %)
0 diff
(100 %id)
AI218241 pooled .b 3064 to 3472 410 to 3       408/410
(99 %)
0 diff
(100 %id)
BP395275 pancreatic islet .b 3082 to 3468 1 to 387     Submitted on the opposite strand 387/388
(99 %)
1 diff
(99.8 %id)
AI707899 aorta .b 3093 to 3471 395 to 17   AAA   379/379
(100 %)
2 diff
(99.5 %id)
BF222011 Prostate .b 3093 to 3471 379 to 1       379/379
(100 %)
0 diff
(100 %id)
AA412105   .b 3113 to 3468 359 to 2       358/359
(99 %)
0 diff
(100 %id)
AA836191 germinal center B cell .b 3120 to 3471 363 to 13   AAA   351/351
(100 %)
3 diff
(99.2 %id)
AA827109 germinal center B cell .b 3122 to 3471 362 to 11   AAA   352/352
(100 %)
4 diff
(98.9 %id)
AI699192 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 3128 to 3472 346 to 1       346/346
(100 %)
2 diff
(99.5 %id)
AA804427 germinal center B cell .b 3244 to 3471 238 to 11   AAA   228/228
(100 %)
0 diff
(100 %id)
FN132190 breast carcinoma .b 3356 to 3451 1 to 93       93/100
(93 %)
5 diff
(95.0 %id)
AA768944 germinal center B cell .b 3360 to 3543 197 to 13   AAA   185/185
(100 %)
2 diff
(99.0 %id)
AI864790 lymph node, lymphoma, follicular mixed small and largecell .b 3379 to 3543 165 to 1       165/165
(100 %)
0 diff
(100 %id)
NM_001083907.2   .c 1 to 3211 2 to 3212 C620R RefSeq, AAA   3212/3212
(100 %)
1 diff
(100.0 %id)
DA946668 Spleen .c 1 to 570 2 to 572   tiling clone, capped   571/571
(100 %)
1 diff
(99.9 %id)
CD685917 normal nasopharynx .c 12 to 584 19 to 590       572/590
(96 %)
7 diff
(98.9 %id)
CD687970 normal nasopharynx .c 16 to 572 41 to 597       557/597
(93 %)
7 diff
(98.9 %id)
DA951468 Spleen .c 17 to 589 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
DA817078   .c 26 to 593 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA940439 Spleen .c 26 to 509 2 to 486   capped   485/493
(98 %)
5 diff
(99.0 %id)
BM918504 pooled pancreas and spleen .c 35 to 715 1 to 687       687/1114
(61 %)
28 diff
(97.5 %id)
BM151775 leukopheresis .c 44 to 480 1 to 437       437/437
(100 %)
6 diff
(98.7 %id)
DA993673 synovial membrane tissue from rheumatioidarthritis .c 46 to 604 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
AK000713 ileal mucosa .c 53 to 3140 1 to 3090 P113L E527D Q541P E542G E543G ... tiling clone, available from FLJ,   3090/3092
(99 %)
8 diff
(99.8 %id)
BP382989 ilea mucosa .c 53 to 614 1 to 561       561/562
(99 %)
7 diff
(98.8 %id)
DA946953 Spleen .c 57 to 632 2 to 577   tiling clone, capped   576/576
(100 %)
0 diff
(100 %id)
NM_001127507.2   .d 1 to 3043 2 to 3044 C517R RefSeq, AAA   3044/3044
(100 %)
1 diff
(100.0 %id)
DA942229 Spleen .d 123 to 696 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
BX282056 pooled germ cell tumors .d 167 to 648 1 to 482       482/482
(100 %)
0 diff
(100 %id)
EU051376   .d 262 to 2245 1 to 1984 C517R tiling clone,   1984/1984
(100 %)
1 diff
(100.0 %id)
AK093024 Spleen .e 1 to 2089 32 to 2119 exact tiling clone, available from FLJ,   2089/2089
(100 %)
5 diff
(99.8 %id)
DA944927 Spleen .e 1 to 547 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DB333458 Spleen .e 1540 to 2089 550 to 1 exact     550/550
(100 %)
0 diff
(100 %id)
BQ301250 bocio_tumor .f 1 to 383 393 to 12 V25G S26F V27C A28C R29K ... tiling clone,   382/393
(97 %)
2 diff
(99.5 %id)
BP327713 prostata .g 1 to 581 1 to 581 E113R E114G tiling clone,   581/584
(99 %)
5 diff
(99.2 %id)
DA323522 hippocampus .h-u 1 to 569 2 to 571 S27N tiling clone, capped   570/570
(100 %)
3 diff
(99.5 %id)
DA458969 tongue, tumor tissue .i 1 to 511 2 to 512 exact tiling clone, capped   511/511
(100 %)
0 diff
(100 %id)
BE245971 leukopheresis .j 1 to 339 339 to 1 exact tiling clone,   339/339
(100 %)
2 diff
(99.5 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI