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Gene BAK1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
410 supporting clones for gene BAK1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC391229 Spleen .a 1 to 405 11 to 415   tiling clone,   405/405
(100 %)
0 diff
(100 %id)
AK292093 synovial membrane tissue from rheumatoidarthritis .a 37 to 1357 1 to 1321 L147P tiling clone,   1321/1321
(100 %)
2 diff
(99.9 %id)
DC385348 rectum .a 37 to 597 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
DC295158 synovial membrane tissue from rheumatioidarthritis .a 37 to 583 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DC391792 Spleen .a 39 to 605 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
CB142221 Liver .b 1 to 431 1 to 431   tiling clone,   431/431
(100 %)
1 diff
(99.8 %id)
NM_001188.3   .b 1 to 2192 1 to 2192 exact RefSeq, AAA   2192/2192
(100 %)
0 diff
(100 %id)
BG421171 Kidney, renal cell adenocarcinoma .b 10 to 718 1 to 720       720/1005
(71 %)
32 diff
(96.9 %id)
AW402478 lymph .b 11 to 370 8 to 367       360/368
(97 %)
8 diff
(97.9 %id)
TI_154138858   .b 11 to 530 80 to 600       519/523
(99 %)
13 diff
(97.6 %id)
DC301511   .b 16 to 614 1 to 599       599/600
(99 %)
2 diff
(99.7 %id)
DC327626 caudate nucleus .b 16 to 577 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
DC357564   .b 16 to 502 1 to 487       487/487
(100 %)
1 diff
(99.8 %id)
DC367384   .b 16 to 564 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
DC352976 brain .b 17 to 589 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
DC298883 adrenal gland .b 18 to 502 1 to 485       485/485
(100 %)
1 diff
(99.8 %id)
DC299722   .b 18 to 597 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC318913 brain .b 18 to 502 1 to 485       485/485
(100 %)
1 diff
(99.8 %id)
CD049750 embryonic stem cells, WA01, passage 38 .b 18 to 814 23 to 829       807/836
(96 %)
21 diff
(97.5 %id)
DC352639 brain .b 18 to 526 1 to 513       512/513
(99 %)
11 diff
(97.9 %id)
DC354887   .b 18 to 573 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC355423   .b 18 to 583 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC357077 heart .b 18 to 582 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
DC364647   .b 18 to 587 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC369004   .b 18 to 481 1 to 467       467/467
(100 %)
3 diff
(99.4 %id)
DC383149 Prostate .b 18 to 562 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
DA901244   .b 18 to 229 103 to 314   capped   212/313
(67 %)
7 diff
(97.8 %id)
DC387591 small intestine .b 18 to 596 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DC389546 Spleen .b 18 to 518 1 to 501       501/501
(100 %)
2 diff
(99.7 %id)
DC394333 esophageal, tumor tissue .b 18 to 578 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
DC414908 trachea .b 18 to 450 1 to 433       433/433
(100 %)
0 diff
(100 %id)
DC298367 adrenal gland .b 20 to 580 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DC427808   .b 20 to 608 1 to 589       589/589
(100 %)
0 diff
(100 %id)
AU099337   .b 20 to 319 1 to 300       300/300
(100 %)
9 diff
(97.0 %id)
DC360424   .b 20 to 566 1 to 547       547/547
(100 %)
2 diff
(99.7 %id)
DC362028 Kidney .b 20 to 573 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC368774   .b 20 to 567 1 to 547       547/547
(100 %)
3 diff
(99.5 %id)
DC419942 uterus .b 20 to 594 1 to 575       575/575
(100 %)
2 diff
(99.7 %id)
DC298174 adrenal gland .b 21 to 567 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DC390413 Spleen .b 21 to 575 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC298198 adrenal gland .b 22 to 592 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
DC297046   .b 22 to 578 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC365252   .b 22 to 502 1 to 481       481/481
(100 %)
0 diff
(100 %id)
DC387399   .b 22 to 502 1 to 481       481/481
(100 %)
0 diff
(100 %id)
DC408911 thymus .b 22 to 582 1 to 561       561/561
(100 %)
0 diff
(100 %id)
BQ059009 lymph, lymphoma, cell line .b 23 to 841 1 to 819       819/1071
(76 %)
6 diff
(99.5 %id)
DC300209   .b 25 to 573 1 to 549       549/549
(100 %)
0 diff
(100 %id)
DC316265 amygdala .b 25 to 518 1 to 494       494/494
(100 %)
1 diff
(99.8 %id)
DC359715   .b 25 to 585 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC428139   .b 25 to 596 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
DC389426 Spleen .b 25 to 616 1 to 592       592/592
(100 %)
0 diff
(100 %id)
DC393395 cervix, tumor tissue .b 25 to 596 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC363636   .b 27 to 610 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BI223219 cervical carcinoma cell line, cervix .b 28 to 764 12 to 748       737/749
(98 %)
9 diff
(98.8 %id)
DC392680 breast, tumor tissue .b 28 to 584 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
AU125109   .b 29 to 823 2 to 792   capped   791/844
(93 %)
11 diff
(98.7 %id)
BI192862 epithelioid carcinoma cell line, Pancreas .b 30 to 587 1 to 566       566/957
(59 %)
29 diff
(97.0 %id)
CB149431 Liver .b 31 to 430 1 to 400       400/400
(100 %)
6 diff
(98.5 %id)
DC427810   .b 32 to 600 1 to 569       569/569
(100 %)
3 diff
(99.5 %id)
BM008592 adenocarcinoma, Pancreas .b 32 to 1028 1 to 988 V154*     986/997
(98 %)
37 diff
(96.3 %id)
BU540950 epithelioid carcinoma cell line, Pancreas .b 33 to 942 1 to 915 G152S I171N Q173X A180X N190T ...     915/918
(99 %)
17 diff
(98.2 %id)
TI_59386296   .b 33 to 1028 62 to 1048 V154*     985/996
(98 %)
36 diff
(96.4 %id)
DC298874 adrenal gland .b 35 to 573 1 to 539       539/539
(100 %)
0 diff
(100 %id)
DC299031   .b 35 to 502 1 to 468       468/468
(100 %)
0 diff
(100 %id)
DC303893 cerebellum .b 35 to 605 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
DC305222 cerebellum .b 35 to 502 1 to 468       468/468
(100 %)
1 diff
(99.8 %id)
DC315359 amygdala .b 35 to 597 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC332273 hippocampus .b 35 to 604 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
DC340233 thalamus .b 35 to 598 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC427915   .b 35 to 619 1 to 585       585/585
(100 %)
2 diff
(99.7 %id)
DC354567 Kidney .b 35 to 610 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC356820 heart .b 35 to 607 1 to 573       573/573
(100 %)
3 diff
(99.5 %id)
DC383745 Prostate .b 35 to 591 1 to 557       557/557
(100 %)
2 diff
(99.7 %id)
DC384027 Prostate .b 35 to 619 1 to 585       585/585
(100 %)
2 diff
(99.7 %id)
DC387102   .b 35 to 600 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC393533 colon, tumor tissue .b 35 to 605 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC418606 trachea .b 35 to 461 1 to 427       427/428
(99 %)
1 diff
(99.8 %id)
DC420524 uterus .b 35 to 600 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC420991 uterus .b 35 to 621 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
DC421556 uterus .b 36 to 607 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
TI_57236918   .b 37 to 712 29 to 703       675/703
(96 %)
8 diff
(98.9 %id)
AL552553 placenta, Placenta Cot 25-normalized .b 38 to 1012 11 to 981 exact     971/981
(98 %)
9 diff
(99.1 %id)
BI910203 leukocyte .b 38 to 712 1 to 675       675/675
(100 %)
2 diff
(99.8 %id)
AL536162 brain, fetal brain .b 41 to 1071 1 to 1019 P187S     1019/1034
(98 %)
17 diff
(98.4 %id)
BX400834.
matches multiple genes
  .b 41 to 890 1 to 849     also hits gene BAK1P1 849/849
(100 %)
2 diff
(99.8 %id)
BU188957 melanotic melanoma, skin .b 41 to 810 1 to 775       775/914
(84 %)
16 diff
(98.3 %id)
BQ231987 melanotic melanoma, skin .b 42 to 811 1 to 774       774/915
(84 %)
23 diff
(97.5 %id)
BQ220686 melanotic melanoma, skin .b 42 to 623 1 to 586       586/1012
(57 %)
15 diff
(98.6 %id)
DC395552 testis .b 43 to 502 1 to 460       460/460
(100 %)
3 diff
(99.4 %id)
DC300003   .b 44 to 610 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
BM146925 leukopheresis .b 44 to 406 1 to 363       363/397
(91 %)
26 diff
(93.5 %id)
BM152535 leukopheresis .b 44 to 492 1 to 448       448/457
(98 %)
33 diff
(92.8 %id)
DC340872 thalamus .b 45 to 625 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC356952 heart .b 45 to 610 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC363099   .b 45 to 573 1 to 530       530/530
(100 %)
2 diff
(99.7 %id)
DC364446   .b 45 to 619 1 to 575       575/575
(100 %)
2 diff
(99.7 %id)
BM839631 Ascites, stomach .b 45 to 500 1 to 457       457/457
(100 %)
2 diff
(99.6 %id)
DC398807 testis .b 45 to 597 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC405003 thymus .b 45 to 603 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
DC406287 thymus .b 45 to 607 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC413201 liver, tumor tissue .b 45 to 502 1 to 458       458/458
(100 %)
0 diff
(100 %id)
DC314953 amygdala .b 46 to 613 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
BX378917 Placenta Cot 25-normalized .b 46 to 834 1 to 789       789/789
(100 %)
1 diff
(99.9 %id)
DC349310   .b 46 to 622 1 to 577       577/577
(100 %)
0 diff
(100 %id)
AL110363 brain .b 46 to 492 1 to 447       447/447
(100 %)
5 diff
(98.9 %id)
BQ060970 lymph, lymphoma, cell line .b 46 to 887 1 to 844   AAA   844/1011
(83 %)
12 diff
(98.9 %id)
BU602990 mixed (pool of 40 RNAs) .b 46 to 547 1 to 507       507/793
(63 %)
14 diff
(98.3 %id)
AU125162   .b 46 to 775 2 to 732   capped   731/733
(99 %)
13 diff
(98.3 %id)
DC406431 thymus .b 46 to 603 1 to 558       558/558
(100 %)
0 diff
(100 %id)
BX343620.
matches multiple genes
placenta, Placenta Cot 25-normalized .b 47 to 869 1 to 822     also hits gene DNMT3A 822/822
(100 %)
1 diff
(99.9 %id)
AL559269 T cells from T cell leukemia .b 47 to 1055 1 to 1001 F203X     1001/1085
(92 %)
13 diff
(98.9 %id)
DC355436   .b 47 to 578 1 to 532       532/532
(100 %)
0 diff
(100 %id)
DC349358   .b 49 to 600 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC412182 kidney, tumor tissue .b 49 to 605 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
DC302008   .b 50 to 533 1 to 484       484/484
(100 %)
0 diff
(100 %id)
DC340813 thalamus .b 51 to 628 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
CA489558   .b 51 to 892 1 to 850       850/888
(95 %)
15 diff
(98.4 %id)
AW402797 lymph .b 52 to 257 1 to 206       206/206
(100 %)
4 diff
(98.1 %id)
TI_57197879   .b 53 to 766 22 to 733       712/734
(97 %)
8 diff
(99.0 %id)
CD610883   .b 58 to 599 1 to 540       542/541
(100 %)
13 diff
(97.6 %id)
BE908974 epithelioid carcinoma, Pancreas .b 58 to 834 1 to 771       771/819
(94 %)
21 diff
(97.5 %id)
TI_154139292   .b 59 to 649 81 to 670       590/669
(88 %)
12 diff
(98.3 %id)
CD610884   .b 61 to 595 533 to 1       533/536
(99 %)
8 diff
(98.6 %id)
BI821204 pooled brain, lung, testis .b 61 to 766 1 to 705       705/706
(99 %)
4 diff
(99.5 %id)
BI912555 leukocyte .b 61 to 772 27 to 756       728/1232
(59 %)
23 diff
(98.2 %id)
DR158524 human embryonic stem cells differentiated toan early endodermal cell type .b 61 to 873 1 to 813       813/813
(100 %)
0 diff
(100 %id)
TI_57247543   .b 61 to 772 27 to 756       728/1232
(59 %)
23 diff
(98.2 %id)
CX758753 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 62 to 796 1 to 734     Submitted on the opposite strand 734/734
(100 %)
2 diff
(99.8 %id)
BI553401 brain, hippocampus .b 64 to 864 8 to 813       804/814
(98 %)
14 diff
(98.3 %id)
TI_44170238   .b 64 to 864 91 to 896       806/897
(89 %)
16 diff
(98.3 %id)
BF668497 brain, primitive neuroectoderm .b 65 to 646 1 to 575       575/819
(70 %)
14 diff
(98.3 %id)
DC384074 Prostate .b 68 to 626 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DB246589   .b 69 to 818 2 to 751   capped   750/752
(99 %)
2 diff
(99.8 %id)
DC299448   .b 72 to 634 1 to 563       563/563
(100 %)
0 diff
(100 %id)
AU076473   .b 73 to 345 1 to 273       273/278
(98 %)
1 diff
(99.7 %id)
DC360245   .b 73 to 565 1 to 493       493/493
(100 %)
0 diff
(100 %id)
DC301154 bladder .b 74 to 637 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC301814   .b 74 to 650 1 to 576       576/585
(98 %)
1 diff
(99.9 %id)
DC305668 cerebellum .b 74 to 578 1 to 505       505/505
(100 %)
1 diff
(99.9 %id)
DC340356 thalamus .b 74 to 622 1 to 549       549/549
(100 %)
0 diff
(100 %id)
DC427860   .b 74 to 672 1 to 599       599/599
(100 %)
0 diff
(100 %id)
DC363461   .b 74 to 625 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC371943   .b 74 to 573 1 to 500       500/500
(100 %)
1 diff
(99.8 %id)
DC378204   .b 74 to 627 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC378517   .b 74 to 650 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
BM835067 stomach .b 74 to 462 1 to 390       390/390
(100 %)
8 diff
(98.0 %id)
DC388079 small intestine .b 74 to 492 1 to 419       419/419
(100 %)
0 diff
(100 %id)
DC404955 thymus .b 74 to 639 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC404972 thymus .b 74 to 625 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC406663 thymus .b 74 to 633 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC419111 stomach, tumor tissue .b 74 to 573 1 to 500       500/500
(100 %)
1 diff
(99.8 %id)
DC340149 thalamus .b 76 to 647 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC428517   .b 76 to 628 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC425318   .b 76 to 625 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC367507   .b 76 to 573 1 to 498       498/498
(100 %)
0 diff
(100 %id)
DC301120 bladder .b 77 to 645 1 to 569       569/569
(100 %)
1 diff
(99.9 %id)
DC392377 stomach .b 77 to 634 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
DC298660 adrenal gland .b 80 to 636 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC319897 brain .b 80 to 647 1 to 568       568/568
(100 %)
0 diff
(100 %id)
BQ891498 carcinoma, cell line, Prostate .b 80 to 841 5 to 773       769/880
(87 %)
25 diff
(97.2 %id)
DC362119 Kidney .b 80 to 652 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC379175 pericardium .b 80 to 646 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC380914 placenta .b 80 to 650 1 to 571       571/580
(98 %)
0 diff
(100 %id)
BM785622 Ascites, stomach .b 80 to 671 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
DC405723 thymus .b 80 to 650 1 to 571       571/579
(98 %)
1 diff
(99.9 %id)
DC407018 thymus .b 80 to 655 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC407380 thymus .b 80 to 637 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC409397 thymus .b 80 to 640 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DA040119 bladder .b 81 to 400 2 to 321   capped   320/320
(100 %)
1 diff
(99.7 %id)
AU280497   .b 81 to 616 32 to 567       536/536
(100 %)
0 diff
(100 %id)
CA495326   .b 82 to 945 1 to 869 G176W W177L V178G A179G A180S ...     869/869
(100 %)
9 diff
(99.0 %id)
CV569625 cornea, eye .b 83 to 437 1 to 355       355/355
(100 %)
0 diff
(100 %id)
CD610885   .b 85 to 716 647 to 17       631/647
(97 %)
1 diff
(99.9 %id)
CD610886   .b 85 to 716 1 to 632       632/649
(97 %)
0 diff
(100 %id)
BM045605 carcinoma, cell line, Prostate .b 85 to 892 1 to 810       808/810
(99 %)
10 diff
(98.8 %id)
BM047026 carcinoma, cell line, Prostate .b 85 to 772 1 to 689       689/723
(95 %)
6 diff
(99.2 %id)
DC405876 thymus .b 85 to 614 1 to 530       530/530
(100 %)
0 diff
(100 %id)
BQ935303 carcinoma, cell line, Prostate .b 87 to 992 1 to 923 V27G V34G L97V Q101A P102A ...     923/948
(97 %)
56 diff
(94.1 %id)
BQ943472 carcinoma, cell line, Prostate .b 87 to 895 1 to 816       816/969
(84 %)
14 diff
(98.6 %id)
BU543017 carcinoma, cell line, Prostate .b 87 to 970 1 to 897 R174K G176W W177L V178G A179W ...     897/899
(99 %)
15 diff
(98.4 %id)
CR600490 B cells (Ramos cell line) Cot 25-normalized .b 89 to 2150 1 to 2062 exact     2062/2062
(100 %)
0 diff
(100 %id)
CR615881 Neuroblastoma Cot 25-normalized .b 89 to 2162 1 to 2074 exact tiling clone,   2074/2074
(100 %)
0 diff
(100 %id)
AL522633.
matches multiple genes
brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 89 to 950 1 to 862 E24X E59X E92X E109X   also hits gene BAK1P1 862/862
(100 %)
0 diff
(100 %id)
BX339629 Placenta Cot 25-normalized .b 89 to 1091 1 to 995 exact     995/1002
(99 %)
15 diff
(98.6 %id)
BX385444   .b 89 to 1156 1 to 1055 R207X     1055/1055
(100 %)
19 diff
(98.2 %id)
BM550041 leukocyte .b 89 to 878 20 to 812       793/1072
(73 %)
12 diff
(98.9 %id)
TI_57166094   .b 89 to 886 29 to 829       801/829
(96 %)
12 diff
(98.6 %id)
DA937825 Spleen .b 89 to 672 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
BC004431 Lung, small cell carcinoma .b 90 to 2186 1 to 2097 exact tiling clone, available from MGC, AAA   2097/2097
(100 %)
2 diff
(100.0 %id)
BG325137 Kidney, renal cell adenocarcinoma .b 90 to 764 1 to 672       672/672
(100 %)
5 diff
(99.3 %id)
BI835433 pooled pancreas and spleen .b 90 to 886 1 to 800       800/800
(100 %)
8 diff
(99.0 %id)
CD610882   .b 91 to 599 509 to 1       509/521
(97 %)
9 diff
(98.3 %id)
DA255211 caudate nucleus .b 92 to 646 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
AL522403 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 94 to 1027 1 to 917 I188S L189*     917/917
(100 %)
12 diff
(98.7 %id)
BX386906 Neuroblastoma Cot 10-normalized .b 94 to 834 1 to 741       741/741
(100 %)
2 diff
(99.8 %id)
AW247573.
matches multiple genes
lung, small cell carcinoma .b 94 to 473 12 to 392     Possibly primed on the genome, locally A rich (32/36 A in genome downstream of last aligned base), also hits gene BAK1P1 381/392
(97 %)
6 diff
(98.5 %id)
BX362975   .b 95 to 1045 1 to 936 exact fully sequenced,   936/936
(100 %)
12 diff
(98.8 %id)
BU848650 ovary, teratocarcinoma, cell line .b 95 to 987 1 to 899 V194G V197G V198G F203X     899/917
(98 %)
10 diff
(99.0 %id)
BU849632 ovary, teratocarcinoma, cell line .b 95 to 889 1 to 796       796/904
(88 %)
2 diff
(99.8 %id)
BU848927 ovary, teratocarcinoma, cell line .b 96 to 961 1 to 866 V197C V198G L199S L200V Q202P ...     866/919
(94 %)
8 diff
(99.2 %id)
CD610881   .b 99 to 599 1 to 501       501/502
(99 %)
6 diff
(98.9 %id)
BI908200 leukocyte .b 99 to 834 1 to 739       739/740
(99 %)
8 diff
(99.0 %id)
DN997443 breast cancer, Mammary gland (cancer tissue) .b 101 to 736 1 to 636       636/637
(99 %)
5 diff
(99.3 %id)
BG744078 blood, natural killer cells, cell line .b 103 to 889 1 to 790       790/790
(100 %)
6 diff
(99.3 %id)
BQ053628 blood, natural killer cells, cell line .b 105 to 701 1 to 601       601/1345
(44 %)
19 diff
(98.6 %id)
DB206914 trachea .b 108 to 650 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
X84213 B-cell .b 109 to 1470 1 to 1359 exact     1359/1360
(99 %)
13 diff
(99.1 %id)
AL529309 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 113 to 916 1 to 804       804/804
(100 %)
3 diff
(99.7 %id)
AU124698   .b 115 to 876 2 to 762   capped   761/761
(100 %)
7 diff
(99.1 %id)
DA923373 small intestine .b 118 to 690 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA658662   .b 121 to 687 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA718000   .b 129 to 681 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA014980 adrenal gland .b 135 to 716 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA428589 colon .b 135 to 694 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB104101 thymus .b 135 to 614 2 to 484   capped   483/483
(100 %)
1 diff
(99.8 %id)
CB144913 Liver .b 140 to 247 1 to 108       108/108
(100 %)
2 diff
(98.2 %id)
BE793110 lung, small cell carcinoma .b 144 to 840 1 to 697       697/700
(99 %)
0 diff
(100 %id)
DA576434   .b 145 to 700 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA702352   .b 150 to 688 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
CN260653 embryonic stem cells, cell lines H1, H7, andH9 .b 153 to 850 1 to 698       698/698
(100 %)
2 diff
(99.8 %id)
DA579759   .b 159 to 713 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BQ052127 blood, natural killer cells, cell line .b 232 to 1090 1 to 877 V194X V197C V198G L199S L200V ...     877/1108
(79 %)
39 diff
(96.5 %id)
U23765   .b 237 to 2187 1 to 1949 exact     1949/1949
(100 %)
2 diff
(99.9 %id)
BM017890 astrocytoma grade IV, cell line, brain .b 238 to 1026 1 to 794 G4W Q5A G6R G8R P9S ...     794/796
(99 %)
20 diff
(97.5 %id)
TI_59388467   .b 238 to 1026 102 to 895 G4W Q5A G6R G8R P9S ...     794/796
(99 %)
20 diff
(97.5 %id)
BI089592 cervix .b 287 to 1047 1 to 764 V198G R206P     764/911
(83 %)
13 diff
(98.6 %id)
CR457419   .b 301 to 932 1 to 632       632/636
(99 %)
1 diff
(99.9 %id)
CV025991 mixed .b 301 to 905 1 to 605       605/605
(100 %)
0 diff
(100 %id)
TI_1948145198   .b 301 to 650 131 to 481   fully sequenced,   351/481
(72 %)
9 diff
(98.2 %id)
BQ641914 lymph, lymphoma, cell line .b 332 to 1065 1 to 741       741/891
(83 %)
28 diff
(96.9 %id)
BG752155 eye, normal pigmented retinal epithelium .b 348 to 1208 1 to 865       865/867
(99 %)
15 diff
(98.3 %id)
BM917272 blood, natural killer cells, cell line .b 348 to 1053 1 to 729       729/1236
(58 %)
19 diff
(98.5 %id)
BQ054099 blood, natural killer cells, cell line .b 348 to 1342 1 to 1020       1020/1068
(95 %)
42 diff
(96.1 %id)
BX355223 Neuroblastoma Cot 50-normalized .b 382 to 1369 1 to 976       976/1002
(97 %)
59 diff
(94.2 %id)
BQ963042 epithelioid carcinoma cell line, Pancreas .b 397 to 1237 1 to 855       855/882
(96 %)
22 diff
(97.6 %id)
CF140896 CNCAP(3)T-225 cell line, Prostate .b 407 to 737 8 to 338       331/338
(97 %)
6 diff
(98.3 %id)
TI_154171510   .b 407 to 865 80 to 541       462/1086
(42 %)
13 diff
(98.9 %id)
BG284366 adenocarcinoma, cell line, Prostate .b 432 to 802 1 to 383       358/383
(93 %)
13 diff
(96.7 %id)
BX350769   .b 463 to 1359 914 to 6       909/914
(99 %)
10 diff
(99.0 %id)
BM792287 Ascites, stomach .b 599 to 1152 1 to 554       554/554
(100 %)
6 diff
(99.0 %id)
TI_1948145199   .b 620 to 935 443 to 125   fully sequenced,   319/443
(72 %)
2 diff
(99.6 %id)
BQ070187 brain, neuroblastoma, cell line .b 651 to 1398 1 to 754       754/1095
(68 %)
15 diff
(98.7 %id)
BQ882890 lymph, lymphoma, cell line .b 651 to 1508 1 to 872       872/876
(99 %)
49 diff
(94.5 %id)
BM013298 brain, neuroblastoma, cell line .b 683 to 1420 1 to 742       742/742
(100 %)
24 diff
(96.8 %id)
TI_59380178   .b 684 to 1420 101 to 841       741/741
(100 %)
23 diff
(96.9 %id)
BG491653 amelanotic melanoma, cell line, skin .b 690 to 1379 1 to 688   fully sequenced,   688/688
(100 %)
5 diff
(99.3 %id)
BM009811 amelanotic melanoma, cell line, skin .b 690 to 1406 1 to 719       719/730
(98 %)
14 diff
(98.1 %id)
TI_59384584   .b 691 to 1406 58 to 775       718/729
(98 %)
13 diff
(98.3 %id)
BM555877 amelanotic melanoma, cell line, skin .b 692 to 1599 1 to 914       914/1109
(82 %)
14 diff
(98.8 %id)
BM558881 amelanotic melanoma, cell line, skin .b 692 to 1593 1 to 905       905/919
(98 %)
10 diff
(99.0 %id)
BM916421 amelanotic melanoma, cell line, skin .b 693 to 1467 1 to 793       793/1184
(66 %)
22 diff
(98.2 %id)
BF914390 uterus_tumor .b 699 to 1033 1 to 335       335/335
(100 %)
1 diff
(99.8 %id)
BF914952 uterus_tumor .b 699 to 1120 1 to 422       422/422
(100 %)
4 diff
(99.1 %id)
BF915118 uterus_tumor .b 699 to 1303 1 to 605       605/608
(99 %)
8 diff
(98.7 %id)
CX760902 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 703 to 1462 1 to 753     Submitted on the opposite strand 753/828
(90 %)
14 diff
(98.4 %id)
BI254808 cervical carcinoma cell line, cervix .b 746 to 1493 1 to 745       745/745
(100 %)
11 diff
(98.6 %id)
BE267379 lung, small cell carcinoma .b 802 to 1455 1 to 643       643/674
(95 %)
19 diff
(97.2 %id)
BX362974   .b 1015 to 2136 1127 to 27   fully sequenced,   1101/1127
(97 %)
20 diff
(98.3 %id)
AL580920 T cells from T cell leukemia .b 1106 to 2158 1049 to 1       1049/1117
(93 %)
22 diff
(98.1 %id)
AL575813 placenta, Placenta Cot 25-normalized .b 1171 to 2079 984 to 81       904/988
(91 %)
0 diff
(100 %id)
BX339628 Placenta Cot 25-normalized .b 1187 to 2158 971 to 1       971/971
(100 %)
5 diff
(99.5 %id)
AL562115.
matches multiple genes
brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 1255 to 2135 912 to 33   tiling clone, also hits gene BAK1P1 880/912
(96 %)
0 diff
(100 %id)
BX400833.
matches multiple genes
  .b 1256 to 2158 903 to 4     also hits gene BAK1P1 900/903
(99 %)
0 diff
(100 %id)
AL529308 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 1307 to 2171 863 to 1       863/869
(99 %)
6 diff
(99.4 %id)
BX378916 Placenta Cot 25-normalized .b 1320 to 2146 831 to 3       829/831
(99 %)
0 diff
(100 %id)
BG491892 amelanotic melanoma, cell line, skin .b 1357 to 2140 791 to 1   fully sequenced,   791/791
(100 %)
23 diff
(97.1 %id)
DB362851   .b 1634 to 2186 549 to 1       549/553
(99 %)
20 diff
(96.4 %id)
DB362528   .b 1647 to 2186 542 to 1       542/543
(99 %)
18 diff
(96.7 %id)
AL536161 brain, fetal brain .b 1762 to 2162 401 to 1       879/900
(97 %)
64 diff
(92.9 %id)
DA425887 colon .c 1 to 571 2 to 573   tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
DB197477 trachea .c 35 to 601 2 to 568 exact tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
CR627020 amygdala .d-u 1 to 7524 1 to 7520 L67P tiling clone, available from DKFZ, AAA   7520/7520
(100 %)
17 diff
(99.8 %id)
N83998   .d-u 4059 to 4208 1 to 150   tiling clone,   150/232
(64 %)
1 diff
(99.6 %id)
BF816949 colon_ins .d-u 4187 to 4712 11 to 534   tiling clone,   524/534
(98 %)
6 diff
(98.9 %id)
DC329929 hippocampus .d-u 4742 to 5313 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
AF038236   .d-u 5119 to 5571 1 to 451   tiling clone,   451/689
(65 %)
5 diff
(99.3 %id)
BI021770 marrow .d-u 5444 to 5605 173 to 16       158/175
(90 %)
0 diff
(100 %id)
BM928289 brain .e 1 to 855 22 to 886 C125W L126F R127E V128S A129G ...     870/1099
(79 %)
25 diff
(97.8 %id)
BI549244 brain, hippocampus .e 1 to 660 7 to 672       652/673
(96 %)
16 diff
(97.7 %id)
TI_44167372   .e 1 to 660 95 to 761   tiling clone,   653/762
(85 %)
18 diff
(97.7 %id)
BQ067627 pooled brain, lung, testis .e 44 to 816 24 to 801 C125L L126F R127E V128S A129G ...     778/1103
(70 %)
23 diff
(98.0 %id)
TI_57201701   .e 44 to 920 100 to 977 A142R T143Y V144R W145L P146A ...     878/977
(89 %)
18 diff
(98.2 %id)
BC110337 Brain, Lung, Testis, adult, pooled whole .e 45 to 2161 1 to 2116 exact tiling clone, AAA   2116/2116
(100 %)
3 diff
(99.9 %id)
BI821957 pooled brain, lung, testis .e 45 to 920 1 to 877 A142R T143Y V144R W145L P146A ...     877/877
(100 %)
16 diff
(98.2 %id)
DA142189 alzheimer cortex .e 83 to 654 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA658021   .f 1 to 567 2 to 568   tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
DA712532   .f 5 to 565 2 to 565   capped   564/564
(100 %)
6 diff
(99.0 %id)
DA736603   .f 7 to 751 2 to 742   capped   741/844
(87 %)
5 diff
(99.5 %id)
BI460835 testis .f 14 to 781 1 to 766       766/768
(99 %)
10 diff
(98.7 %id)
DA590428 lung .f 17 to 573 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA902890   .f 28 to 585 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
CR615932 Placenta Cot 25-normalized .f 35 to 2078 1 to 2044 exact tiling clone,   2044/2044
(100 %)
0 diff
(100 %id)
BX335068 Placenta Cot 25-normalized .f 35 to 1056 1 to 1008 G117W W118L V119G A120G A121S ... fully sequenced,   1008/1008
(100 %)
15 diff
(98.6 %id)
TI_57237373   .f 35 to 809 30 to 809       780/1103
(70 %)
25 diff
(97.8 %id)
BI909012 leukocyte .f 43 to 809 1 to 773       773/1067
(72 %)
23 diff
(97.9 %id)
DN999472   .f 47 to 676 9 to 638       630/638
(98 %)
8 diff
(98.8 %id)
AK091807 lung .f 56 to 2107 1 to 2052 exact available from FLJ,   2052/2060
(99 %)
6 diff
(99.8 %id)
DA948763 Spleen .f 56 to 604 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA584482 lung .f 57 to 649 2 to 594   capped   593/593
(100 %)
2 diff
(99.7 %id)
BI911660 leukocyte .f 71 to 807 29 to 775   available from MGC,   747/775
(96 %)
14 diff
(98.2 %id)
TI_57233405   .f 71 to 807 29 to 775       747/775
(96 %)
14 diff
(98.2 %id)
BC032789 Blood, adult leukocytes .f 72 to 2106 1 to 2036 exact tiling clone, available from MGC, AAA   2036/2036
(100 %)
1 diff
(100.0 %id)
BF739056 bladder_tumor .f 757 to 1031 1 to 275       275/275
(100 %)
5 diff
(98.2 %id)
BY996686   .f 784 to 1473 15 to 704       690/704
(98 %)
6 diff
(99.2 %id)
BQ059590 lymph, lymphoma, cell line .f 788 to 1488 1 to 705       705/1079
(65 %)
13 diff
(98.8 %id)
BG530884 embryonal carcinoma, testis .f 799 to 1596 1 to 796       796/857
(92 %)
21 diff
(97.6 %id)
BQ062688 lymph, lymphoma, cell line .f 817 to 1518 32 to 735       704/1120
(62 %)
13 diff
(98.9 %id)
BQ672489 epidermoid carcinoma, cell line, salivary gland .f 827 to 1507 1 to 686       686/956
(71 %)
18 diff
(98.2 %id)
BM563300 astrocytoma grade IV, cell line, brain .f 883 to 1517 1 to 635       635/1081
(58 %)
4 diff
(99.7 %id)
BF917923 uterus_tumor .f 904 to 1048 158 to 14     Submitted on the opposite strand 145/158
(91 %)
0 diff
(100 %id)
AF038245   .f 906 to 1202 1 to 299       299/299
(100 %)
10 diff
(96.7 %id)
AF038246   .f 906 to 1365 1 to 460       460/462
(99 %)
23 diff
(95.1 %id)
AF034190 lung, muscle .f 906 to 1716 1 to 817       817/817
(100 %)
21 diff
(97.5 %id)
BF911393 uterus_tumor .f 919 to 1387 487 to 18     Submitted on the opposite strand 470/487
(96 %)
15 diff
(97.0 %id)
AL524102.
matches multiple genes
brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .f 929 to 2082 1142 to 1     also hits gene BAK1P1 1142/1180
(96 %)
29 diff
(97.6 %id)
CR610168 thymus .f 936 to 2084 1 to 1149       1149/1149
(100 %)
0 diff
(100 %id)
BX457239.
matches multiple genes
thymus .f 936 to 1782 1 to 845     also hits gene BAK1P1 845/845
(100 %)
3 diff
(99.7 %id)
BQ217256 melanotic melanoma, skin .f 938 to 1681 1 to 750       750/880
(85 %)
23 diff
(97.4 %id)
BP424977 small intestine .f 971 to 1457 1 to 487     Submitted on the opposite strand 487/487
(100 %)
2 diff
(99.6 %id)
BG164748 hypernephroma, cell line, Kidney .f 978 to 1481 1 to 513       513/1128
(45 %)
13 diff
(98.9 %id)
BE798868 lung, small cell carcinoma .f 1018 to 1805 28 to 808       781/1010
(77 %)
26 diff
(97.5 %id)
BX335067 Placenta Cot 25-normalized .f 1032 to 2078 1040 to 1   fully sequenced,   1040/1040
(100 %)
13 diff
(98.8 %id)
AL522402 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .f 1047 to 1991 936 to 1       936/946
(98 %)
24 diff
(97.5 %id)
AA421826.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 1049 to 1280 1 to 227     also hits gene BAK1P1 227/227
(100 %)
5 diff
(97.8 %id)
CB987825 Pooled-Glandular .f 1052 to 1525 1 to 474       474/475
(99 %)
3 diff
(99.4 %id)
BF914197 uterus_tumor .f 1070 to 1221 150 to 1     Submitted on the opposite strand 150/150
(100 %)
2 diff
(98.7 %id)
BF914201 uterus_tumor .f 1070 to 1221 150 to 1     Submitted on the opposite strand 150/150
(100 %)
2 diff
(98.7 %id)
BF914330 uterus_tumor .f 1070 to 1307 1 to 238       238/259
(91 %)
4 diff
(98.5 %id)
BF914334 uterus_tumor .f 1070 to 1297 1 to 228       228/228
(100 %)
1 diff
(99.6 %id)
BF914885 uterus_tumor .f 1070 to 1297 228 to 1     Submitted on the opposite strand 228/228
(100 %)
2 diff
(99.2 %id)
BF917933 uterus_tumor .f 1070 to 1230 1 to 161       161/166
(96 %)
6 diff
(96.4 %id)
W23886 lung .f 1090 to 1249 1 to 161       161/161
(100 %)
1 diff
(99.4 %id)
BG010211.
matches multiple genes
placenta_normal .f 1093 to 1338 252 to 7   tiling clone, also hits gene BAK1P1 246/262
(93 %)
0 diff
(100 %id)
BG696776 skin .f 1095 to 1863 1 to 768       768/768
(100 %)
2 diff
(99.8 %id)
BF819723 kidney_tumor .f 1100 to 1239 1 to 139       139/139
(100 %)
7 diff
(95.0 %id)
BI060052 uterus_tumor .f 1100 to 1221 1 to 122       122/122
(100 %)
0 diff
(100 %id)
BX385443   .f 1113 to 2070 949 to 1       949/1031
(92 %)
15 diff
(98.6 %id)
BX376039.
matches multiple genes
Neuroblastoma Cot 25-normalized .f 1132 to 2093 959 to 1     also hits gene BAK1P1 959/965
(99 %)
8 diff
(99.2 %id)
BM930899 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 1157 to 1479 1 to 323   fully sequenced,   323/323
(100 %)
3 diff
(99.1 %id)
CR608985 Neuroblastoma Cot 25-normalized .f 1165 to 2107 1 to 943       943/943
(100 %)
0 diff
(100 %id)
BX385687 Neuroblastoma Cot 25-normalized .f 1165 to 2074 1 to 910       910/910
(100 %)
3 diff
(99.7 %id)
BX394663 Neuroblastoma Cot 25-normalized .f 1165 to 2103 1 to 941       941/944
(99 %)
15 diff
(98.5 %id)
BM549560 astrocytoma grade IV, cell line, brain .f 1178 to 1523 27 to 372       346/1480
(23 %)
1 diff
(100.0 %id)
BX343619.
matches multiple genes
placenta, Placenta Cot 25-normalized .f 1232 to 2056 824 to 1     also hits gene DNMT3A 824/824
(100 %)
25 diff
(97.0 %id)
BG743617 skin .f 1233 to 2065 1 to 835       835/839
(99 %)
14 diff
(98.4 %id)
BQ214199 melanotic melanoma, skin .f 1237 to 1952 1 to 721       721/864
(83 %)
21 diff
(97.6 %id)
CV816731 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .f 1242 to 1938 1 to 697       697/698
(99 %)
5 diff
(99.3 %id)
BX386905 Neuroblastoma Cot 10-normalized .f 1275 to 1970 788 to 93       696/788
(88 %)
0 diff
(100 %id)
BX097644 ovarian tumor, ovary .f 1290 to 1968 1 to 680       680/680
(100 %)
2 diff
(99.8 %id)
H52672 ovarian tumor, ovary .f 1290 to 1693 1 to 405       405/409
(99 %)
8 diff
(98.1 %id)
BM147167 leukopheresis .f 1325 to 1826 503 to 1       503/504
(99 %)
2 diff
(99.7 %id)
BQ956726 brain, neuroblastoma, cell line .f 1354 to 1928 1 to 575       575/1027
(55 %)
22 diff
(97.9 %id)
TI_158431329   .f 1383 to 2106 811 to 101   AAA   711/825
(86 %)
31 diff
(96.3 %id)
CB853689 Human Lung Epithelial cells, lung .f 1443 to 2104 681 to 19   AAA   663/663
(100 %)
2 diff
(99.7 %id)
BQ575664 Chondrosarcoma Grade II, Left Pelvis .f 1443 to 2106 683 to 19   AAA   665/665
(100 %)
2 diff
(99.7 %id)
BF093819 uterus .f 1445 to 1974 531 to 1       531/532
(99 %)
3 diff
(99.5 %id)
BM684417 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 1449 to 2113 677 to 12   fully sequenced,   666/677
(98 %)
7 diff
(99.0 %id)
BE795230 lung, small cell carcinoma .f 1451 to 2103 670 to 1     Submitted on the opposite strand 670/676
(99 %)
50 diff
(92.7 %id)
TI_158433207   .f 1454 to 2106 756 to 96   AAA   661/780
(84 %)
18 diff
(97.7 %id)
CA307988 Alveolar Macrophage, lung .f 1469 to 2106 658 to 19   AAA   640/640
(100 %)
3 diff
(99.6 %id)
BU537631 mixed (pool of 40 RNAs) .f 1479 to 2104 1 to 631       631/803
(78 %)
21 diff
(97.4 %id)
CD743041 Alveolar Macrophage, lung .f 1505 to 2106 621 to 19   AAA   603/603
(100 %)
2 diff
(99.7 %id)
CA438650 lung, Metastatic Chondrosarcoma .f 1511 to 2106 615 to 19   AAA   597/597
(100 %)
1 diff
(99.9 %id)
AI741331.
matches multiple genes
pooled .f 1525 to 2107 588 to 6   tiling clone, also hits gene BAK1P1 583/588
(99 %)
0 diff
(100 %id)
CA307152 Alveolar Macrophage, lung .f 1526 to 2106 600 to 19   AAA   582/582
(100 %)
5 diff
(99.2 %id)
BY799901 eye .f 1527 to 2045 1 to 519       519/519
(100 %)
1 diff
(99.9 %id)
CA310022 Alveolar Macrophage, lung .f 1529 to 2106 598 to 19   AAA   580/580
(100 %)
2 diff
(99.7 %id)
BX352120 Placenta Cot 25-normalized .f 1554 to 2102 549 to 1       549/640
(85 %)
31 diff
(95.2 %id)
DB319354 lung .f 1559 to 2107 559 to 9       551/560
(98 %)
0 diff
(100 %id)
AW009477 colon .f 1575 to 2107 534 to 2       533/534
(99 %)
0 diff
(100 %id)
BG315161   .f 1577 to 1828 252 to 1       252/252
(100 %)
0 diff
(100 %id)
BQ010829 placenta .f 1581 to 2106 545 to 19   AAA   527/527
(100 %)
2 diff
(99.7 %id)
BI000464 head_normal .f 1583 to 1994 420 to 10       411/420
(97 %)
0 diff
(100 %id)
BM193332 leukopheresis .f 1604 to 1826 223 to 1       223/235
(94 %)
3 diff
(98.8 %id)
TI_157609858   .f 1611 to 2106 606 to 102   AAA   505/587
(86 %)
21 diff
(96.5 %id)
TI_159712801   .f 1619 to 2106 601 to 114   AAA   488/995
(49 %)
13 diff
(98.7 %id)
BU601984 mixed (pool of 40 RNAs) .f 1633 to 2107 1 to 475   AAA   475/479
(99 %)
3 diff
(99.4 %id)
BI000411 head_normal .f 1638 to 1987 32 to 381       350/381
(91 %)
6 diff
(98.5 %id)
AI122994 pooled .f 1669 to 2106 447 to 12   AAA   436/436
(100 %)
4 diff
(99.1 %id)
BG180823 adenocarcinoma, cell line, Prostate .f 1669 to 2106 1 to 435   AAA   435/435
(100 %)
4 diff
(99.1 %id)
AW009293 colon .f 1678 to 2107 430 to 1       430/438
(98 %)
27 diff
(93.9 %id)
AW276601 lung, two pooled squamous cell carcinomas .f 1680 to 2106 427 to 1       427/427
(100 %)
1 diff
(99.8 %id)
BX404277 neuroblastoma .f 1687 to 2107 1 to 421       421/421
(100 %)
6 diff
(98.6 %id)
BG284148 adenocarcinoma, cell line, Prostate .f 1689 to 2092 1 to 404       404/864
(46 %)
4 diff
(99.6 %id)
BE886648 leiomyosarcoma, uterus .f 1702 to 2106 1 to 404   AAA   404/404
(100 %)
2 diff
(99.6 %id)
H52673 ovarian tumor, ovary .f 1705 to 2104 410 to 7       404/449
(89 %)
0 diff
(100 %id)
AI889206 brain, tumor, 5 pooled (see description) .f 1716 to 2111 422 to 27   AAA   396/396
(100 %)
14 diff
(96.5 %id)
CA336636 posterior rhombomeres 5-8 (4 pooled) .f 1724 to 2105 1 to 382       382/382
(100 %)
2 diff
(99.5 %id)
AI185937 lung .f 1728 to 2107 380 to 1       380/380
(100 %)
1 diff
(99.8 %id)
TI_157599402   .f 1732 to 2106 481 to 104   AAA   378/670
(56 %)
9 diff
(98.7 %id)
AA761121 germinal center B cell .f 1735 to 2106 403 to 33   AAA   371/371
(100 %)
2 diff
(99.5 %id)
AI916653 colon, colon tumor, RER+ .f 1742 to 2106 378 to 13   AAA   366/366
(100 %)
6 diff
(98.4 %id)
AW392358.
matches multiple genes
stomach .f 1751 to 1985 1 to 233     also hits gene BAK1P1 233/233
(100 %)
5 diff
(97.9 %id)
AW392345.
matches multiple genes
stomach .f 1752 to 1985 239 to 8     also hits gene BAK1P1 232/240
(96 %)
0 diff
(100 %id)
EC468280.
matches multiple genes
Prostate .f 1757 to 1865 1 to 108     also hits gene BAK1P1 108/108
(100 %)
4 diff
(96.3 %id)
BM148663 leukopheresis .f 1777 to 2106 346 to 17   AAA   330/348
(94 %)
4 diff
(98.9 %id)
AW392349.
matches multiple genes
stomach .f 1784 to 1951 176 to 9     also hits gene BAK1P1 168/176
(95 %)
0 diff
(100 %id)
AW816570.
matches multiple genes
stomach .f 1784 to 1963 187 to 7     also hits gene BAK1P1 181/187
(96 %)
0 diff
(100 %id)
AW816933.
matches multiple genes
stomach .f 1784 to 1963 187 to 7     also hits gene BAK1P1 181/187
(96 %)
0 diff
(100 %id)
BP420088.
matches multiple genes
small intestine .f 1794 to 2107 1 to 314     Submitted on the opposite strand, also hits gene BAK1P1 314/317
(99 %)
1 diff
(99.7 %id)
AA923639 colon, colon tumor RER+ .f 1795 to 2106 311 to 1       311/311
(100 %)
2 diff
(99.4 %id)
AI197795 anaplastic oligodendroglioma, brain .f 1816 to 2106 291 to 1       291/291
(100 %)
0 diff
(100 %id)
CF530051 placenta .f 1832 to 2106 293 to 19   AAA   275/275
(100 %)
0 diff
(100 %id)
BF109858 pooled .f 1837 to 2107 272 to 2       271/272
(99 %)
0 diff
(100 %id)
DB369113   .f 1846 to 2104 261 to 3       259/266
(97 %)
0 diff
(100 %id)
CF529117 placenta .f 1848 to 2106 276 to 18   AAA   259/259
(100 %)
0 diff
(100 %id)
AA582473 Kidney, kidney tumor .f 1852 to 2106 255 to 1       255/255
(100 %)
1 diff
(99.7 %id)
AA935768 carcinoid, lung .f 1872 to 2106 260 to 27   AAA   234/234
(100 %)
1 diff
(99.6 %id)
AI720946 colon .f 1875 to 2107 235 to 3       233/235
(99 %)
0 diff
(100 %id)
BM855203 stomach .f 1886 to 2112 1 to 227   AAA   227/227
(100 %)
0 diff
(100 %id)
AA872946 2 pooled tumors (clear cell type), Kidney .f 1896 to 2107 212 to 3       210/212
(99 %)
0 diff
(100 %id)
AA887561 Kidney .f 1973 to 2106 134 to 1       134/138
(97 %)
1 diff
(99.3 %id)
AI953058 pooled germ cell tumors .f 1996 to 2106 125 to 15   AAA   111/111
(100 %)
1 diff
(99.1 %id)
BQ215982 embryonal carcinoma, cell line, testis .g 1 to 605 1 to 608 Q29R D30T T31Q E32R E33R ... tiling clone,   608/777
(78 %)
11 diff
(98.6 %id)
AK303422 thymus .h 1 to 1019 1 to 1019 exact tiling clone,   1019/1019
(100 %)
0 diff
(100 %id)
DC410939 thymus .h 53 to 645 1 to 593       593/593
(100 %)
0 diff
(100 %id)
DC411007 thymus .h 55 to 649 1 to 595       595/595
(100 %)
0 diff
(100 %id)
CB151540 cervix, Uterine .i 1 to 606 1 to 606 exact tiling clone,   606/606
(100 %)
0 diff
(100 %id)
DA200331 brain .j 1 to 570 2 to 571 exact tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
DA084622 cerebellum .k 1 to 550 2 to 551 exact tiling clone, capped   550/550
(100 %)
3 diff
(99.5 %id)
BI911248 leukocyte .l 1 to 784 2 to 795 D24G D25R I26H N27Q R28P ... tiling clone,   794/796
(99 %)
33 diff
(95.9 %id)
TI_57232031   .l 1 to 784 2 to 795 D24G D25R I26H N27Q R28P ...     794/796
(99 %)
33 diff
(95.9 %id)
BX376040.
matches multiple genes
Neuroblastoma Cot 25-normalized P1.a-u 32 to 937 1 to 904 H42R A52V Y110F S116T S135G ...   also hits gene BAK1P1 904/904
(100 %)
22 diff
(97.6 %id)
AL524103.
matches multiple genes
brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized P1.a-u 42 to 1058 1 to 1008 H42R A52V L78H E109X S116T ... tiling clone, also hits gene BAK1P1 1008/1064
(94 %)
33 diff
(96.9 %id)
AA421826.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus P1.a-u 1082 to 1313 1 to 227     also hits gene BAK1P1 227/227
(100 %)
6 diff
(97.4 %id)
BG010211.
matches multiple genes
placenta_normal P1.a-u 1126 to 1371 252 to 7   tiling clone, also hits gene BAK1P1 246/262
(93 %)
0 diff
(100 %id)
BX457238.
matches multiple genes
thymus P1.a-u 1184 to 2116 932 to 1   tiling clone, also hits gene BAK1P1 932/932
(100 %)
13 diff
(98.7 %id)
AL562115.
matches multiple genes
brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized P1.a-u 1208 to 2087 912 to 33   tiling clone, also hits gene BAK1P1 880/912
(96 %)
0 diff
(100 %id)
BX400833.
matches multiple genes
  P1.a-u 1209 to 2110 903 to 4     also hits gene BAK1P1 900/903
(99 %)
0 diff
(100 %id)
AI741331.
matches multiple genes
pooled P1.a-u 1558 to 2144 588 to 1   tiling clone, also hits gene BAK1P1 588/588
(100 %)
6 diff
(99.0 %id)
AW392358.
matches multiple genes
stomach P1.a-u 1784 to 2018 1 to 233     also hits gene BAK1P1 233/233
(100 %)
6 diff
(97.5 %id)
AW392345.
matches multiple genes
stomach P1.a-u 1785 to 2018 239 to 8     also hits gene BAK1P1 232/240
(96 %)
0 diff
(100 %id)
EC468280.
matches multiple genes
Prostate P1.a-u 1790 to 1898 1 to 108     also hits gene BAK1P1 108/108
(100 %)
4 diff
(96.3 %id)
AW392349.
matches multiple genes
stomach P1.a-u 1817 to 1984 176 to 9     also hits gene BAK1P1 168/176
(95 %)
0 diff
(100 %id)
AW816570.
matches multiple genes
stomach P1.a-u 1817 to 1996 187 to 7     also hits gene BAK1P1 181/187
(96 %)
0 diff
(100 %id)
AW816933.
matches multiple genes
stomach P1.a-u 1817 to 1996 187 to 7     also hits gene BAK1P1 181/187
(96 %)
0 diff
(100 %id)
BP420088.
matches multiple genes
small intestine P1.a-u 1827 to 2142 1 to 317     Submitted on the opposite strand, also hits gene BAK1P1 317/317
(100 %)
3 diff
(99.1 %id)
AW245174.
matches multiple genes
lung, small cell carcinoma P1.a-u 1842 to 2138 308 to 11   AAA Possibly primed on the genome, locally A rich (32/36 A in genome downstream of last aligned base), also hits gene BAK1P1 298/306
(97 %)
18 diff
(94.2 %id)
AF520590   Gene BAK1, variant not shown         Suspected internal deletion, this clone was ignored    
AK293547 cerebellum Gene BAK1, variant not shown         Suspected internal deletion, this clone was ignored    
DC303419 cerebellum Gene BAK1, variant not shown         Suspected internal deletion, this clone was ignored    
AA627701 colon, colon tumor RER+ Gene BAK1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BM786607 Ascites, stomach Gene BAK1, variant not shown         Suspected internal deletion, this clone was ignored    
U16811   Gene BAK1, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f, .g, .h, .i, .j, .k, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI