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Gene ATRTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
215 supporting clones for gene ATR back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA215751 germinal center B cell .a 1 to 216 1 to 214   tiling clone,   214/224
(95 %)
17 diff
(92.5 %id)
DC346860 tongue, tumor tissue .a 41 to 594 1 to 556   tiling clone,   556/556
(100 %)
3 diff
(99.5 %id)
NM_001184.3   .a 42 to 8298 1 to 8257 exact RefSeq,   8257/8258
(99 %)
5 diff
(100.0 %id)
U49844   .a 59 to 8260 1 to 8202 exact tiling clone,   8202/8210
(99 %)
2 diff
(100.0 %id)
AK307402 brain .a 75 to 2473 1 to 2399       2399/2399
(100 %)
5 diff
(99.8 %id)
DC374464 brain .a 75 to 636 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
DA461124 tongue, tumor tissue .a 76 to 643 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
U76308   .a 85 to 8289 1 to 8205 A92R tiling clone, AAA   8205/8205
(100 %)
5 diff
(100.0 %id)
Y09077   .a 85 to 8289 1 to 8205 A92R AAA   8205/8205
(100 %)
5 diff
(100.0 %id)
DA276776 corpus callosum .a 88 to 662 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BP355051   .a 104 to 684 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
CN260558 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 120 to 675 1 to 556       556/556
(100 %)
4 diff
(99.3 %id)
AL707012 human skeletal muscle .a 122 to 658 1 to 538       538/538
(100 %)
1 diff
(99.9 %id)
BU193242 eye, retinoblastoma .a 125 to 977 1 to 855       855/855
(100 %)
5 diff
(99.5 %id)
BP343138 stomach mucosa .a 135 to 715 1 to 579       579/579
(100 %)
8 diff
(98.7 %id)
AI902747 breast .a 642 to 971 1 to 330       330/330
(100 %)
0 diff
(100 %id)
AI902746 breast .a 985 to 1120 1 to 136       136/137
(99 %)
3 diff
(97.9 %id)
BQ432546 testis .a 1581 to 2214 1 to 642       642/814
(78 %)
14 diff
(98.3 %id)
BP233953 coronary artery .a 1633 to 2219 1 to 588       588/588
(100 %)
7 diff
(98.9 %id)
DA490916 brain .a 1740 to 2325 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
FN064016 breast carcinoma .a 1785 to 1845 1 to 61       61/61
(100 %)
3 diff
(95.1 %id)
AI685264 pooled .a 1877 to 2473 597 to 1       597/597
(100 %)
4 diff
(99.4 %id)
DB225901 trachea .a 1930 to 2490 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BE646363 B-cell, chronic lymphotic leukemia .a 1970 to 2474 505 to 1       505/505
(100 %)
0 diff
(100 %id)
FN146037 breast carcinoma .a 2014 to 2106 1 to 94       94/97
(96 %)
4 diff
(95.9 %id)
AA825525 germinal center B cell .a 2031 to 2482 452 to 1       452/453
(99 %)
4 diff
(99.2 %id)
BG223235 moderate to poorly differentiated invasivecarcinoma, tongue .a 2064 to 2470 22 to 428       407/428
(95 %)
8 diff
(98.2 %id)
AA215661 germinal center B cell .a 2068 to 2474 411 to 1       411/411
(100 %)
6 diff
(98.6 %id)
FN103299 breast carcinoma .a 2072 to 2175 103 to 1     Submitted on the opposite strand 103/103
(100 %)
1 diff
(99.1 %id)
DA498814 brain .a 2448 to 3005 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA490170 brain .a 2736 to 3284 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BM452469 eye, retinoblastoma .a 3041 to 3981 1 to 944       944/1031
(91 %)
12 diff
(98.9 %id)
AL039634 testis .a 3302 to 3772 1 to 471       471/471
(100 %)
1 diff
(99.8 %id)
BU431210 lymph .a 3878 to 4333 8 to 463       456/463
(98 %)
1 diff
(99.8 %id)
TI_154153074   .a 3878 to 4437 80 to 639       560/573
(97 %)
14 diff
(97.6 %id)
BE697574 colon .a 3973 to 4112 10 to 148       139/157
(88 %)
6 diff
(96.2 %id)
DB098621 testis .a 4243 to 4815 2 to 575   capped   574/574
(100 %)
3 diff
(99.5 %id)
DB086361 testis .a 4253 to 4806 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BF930497 nervous_tumor .a 4375 to 4760 1 to 386       386/386
(100 %)
5 diff
(98.8 %id)
BX646290   .a 4441 to 5002 1 to 562       562/571
(98 %)
1 diff
(99.9 %id)
AU138930 placenta .a 4658 to 5390 2 to 735   capped   734/734
(100 %)
6 diff
(99.2 %id)
BF737893 bladder_tumor .a 4776 to 4989 292 to 78     Submitted on the opposite strand 215/292
(73 %)
0 diff
(100 %id)
BQ355742 head_neck .a 4803 to 4913 1 to 111       111/111
(100 %)
6 diff
(94.6 %id)
EH339578   .a 4835 to 4888 1 to 54       54/56
(96 %)
1 diff
(98.3 %id)
CN260557 embryonic stem cells, cell lines H1, H7, andH9 .a 4898 to 5085 1 to 188       188/188
(100 %)
2 diff
(99.0 %id)
BX497770 Liver .a 4957 to 5333 1 to 377       377/377
(100 %)
4 diff
(99.0 %id)
BG768017 melanotic melanoma, high MDR (cell line), skin .a 5112 to 5719 1 to 611   AAA   611/734
(83 %)
21 diff
(97.2 %id)
BG770191 melanotic melanoma, high MDR (cell line), skin .a 5112 to 5780 1 to 673       673/673
(100 %)
11 diff
(98.4 %id)
BP377188 uterus .a 5144 to 5715 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
AW754364 colon .a 5154 to 5493 1 to 342       342/352
(97 %)
24 diff
(93.2 %id)
CN260556 embryonic stem cells, DMSO-treated H9 cellline .a 5193 to 5749 1 to 557       557/557
(100 %)
0 diff
(100 %id)
BU521017 leiomyosarcoma, uterus .a 5225 to 6025 1 to 812       812/831
(97 %)
15 diff
(98.2 %id)
BG960271 colon .a 5327 to 5878 32 to 582       551/583
(94 %)
10 diff
(98.3 %id)
BG960875 colon .a 5327 to 5855 18 to 544       527/544
(96 %)
10 diff
(98.2 %id)
CD359676 testis .a 5398 to 6247 1 to 852       852/860
(99 %)
5 diff
(99.5 %id)
BP367146 thymus .a 5417 to 5994 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
CB134903 Liver .a 5559 to 6195 1 to 637       637/637
(100 %)
1 diff
(99.9 %id)
BU146099 dorsal root ganglia .a 5574 to 6444 1 to 872       872/872
(100 %)
2 diff
(99.8 %id)
DA396526 thalamus .a 5608 to 6205 2 to 599   capped   598/598
(100 %)
1 diff
(99.9 %id)
BE894977 melanotic melanoma, skin .a 5644 to 6371 1 to 725       725/811
(89 %)
23 diff
(97.2 %id)
BF222914 pooled germ cell tumors .a 5705 to 6230 527 to 1       527/527
(100 %)
23 diff
(95.7 %id)
BP331887 renal proximal tubule .a 5719 to 6298 1 to 580       580/580
(100 %)
0 diff
(100 %id)
ES309662 occipital hair of pubic hypotrichosispatient, skin .a 5830 to 6526 22 to 708       687/714
(96 %)
21 diff
(97.1 %id)
AU133155   .a 5896 to 6731 2 to 840   capped   839/839
(100 %)
12 diff
(98.6 %id)
Z21145   .a 5930 to 6114 1 to 183       183/204
(89 %)
3 diff
(98.6 %id)
CD610878   .a 6044 to 6654 8 to 617       610/617
(98 %)
8 diff
(98.8 %id)
DA362454 subthalamic nucleus .a 6048 to 6602 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
BP265944 thyroid .a 6282 to 6852 1 to 571       571/571
(100 %)
3 diff
(99.5 %id)
BQ226453 embryonal carcinoma, cell line, testis .a 6372 to 7184 1 to 823       823/924
(89 %)
14 diff
(98.5 %id)
DA161350 amygdala .a 6405 to 6981 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
BI259481 cervical carcinoma cell line, cervix .a 6463 to 7254 1 to 815       772/982
(78 %)
23 diff
(97.7 %id)
CD610877   .a 6537 to 7157 630 to 9       622/630
(98 %)
6 diff
(99.1 %id)
BM855140 Ascites, stomach .a 6646 to 7210 1 to 565       565/565
(100 %)
0 diff
(100 %id)
BG679313 skin, squamous cell carcinoma .a 6662 to 7306 1 to 644       644/644
(100 %)
1 diff
(99.9 %id)
CA771525 Pancreas, Purified pancreatic islet .a 6719 to 7358 11 to 650       638/650
(98 %)
9 diff
(98.7 %id)
DT220772 brain .a 6756 to 7169 1 to 415       415/415
(100 %)
5 diff
(98.8 %id)
FN136752 breast carcinoma .a 6808 to 6878 1 to 71       71/71
(100 %)
1 diff
(98.6 %id)
Z21146   .a 6893 to 7126 233 to 1       233/233
(100 %)
1 diff
(99.6 %id)
DN920275   .a 6929 to 7466 1 to 538       538/538
(100 %)
1 diff
(99.9 %id)
FN162731 breast carcinoma .a 7115 to 7204 90 to 5     Submitted on the opposite strand 86/90
(95 %)
0 diff
(100 %id)
BM796532 Ascites, stomach .a 7158 to 7624 1 to 467       467/467
(100 %)
1 diff
(99.8 %id)
BM152337 leukopheresis .a 7201 to 7356 1 to 156       156/160
(97 %)
9 diff
(94.4 %id)
BF094478 uterus_tumor .a 7363 to 7766 29 to 430       402/430
(93 %)
12 diff
(97.3 %id)
BE763954 nervous_tumor .a 7378 to 7617 1 to 234       234/234
(100 %)
13 diff
(94.5 %id)
AV751232 Pituitary .a 7411 to 7862 133 to 581       449/591
(75 %)
10 diff
(98.4 %id)
TI_149274160   .a 7463 to 8291 900 to 85   AAA   816/980
(83 %)
27 diff
(97.3 %id)
CK819648 Islets of Langerhans, Pancreas .a 7478 to 8075 1 to 598       598/598
(100 %)
1 diff
(99.9 %id)
BU616550 Cell Line, Chondrosarcoma .a 7488 to 8209 740 to 19   AAA   722/722
(100 %)
4 diff
(99.5 %id)
BM129718 Islets of Langerhans, Pancreas .a 7494 to 8045 1 to 552       552/552
(100 %)
1 diff
(99.9 %id)
BM141963 Islets of Langerhans, Pancreas .a 7494 to 7849 1 to 356   fully sequenced,   356/356
(100 %)
0 diff
(100 %id)
TI_154040312   .a 7568 to 8290 830 to 116       715/1023
(69 %)
9 diff
(99.2 %id)
AW390065 stomach .a 7575 to 7904 1 to 330       330/330
(100 %)
4 diff
(98.8 %id)
AW390089 stomach .a 7579 to 8033 453 to 1       453/457
(99 %)
8 diff
(98.3 %id)
BE221326 malignant melanoma, metastatic to lymphnode, skin .a 7613 to 8211 600 to 1       600/600
(100 %)
6 diff
(99.0 %id)
BF437305 Prostate .a 7664 to 8009 346 to 1       346/346
(100 %)
25 diff
(92.8 %id)
AW769028 colon, moderately-differentiated adenocarcinoma .a 7666 to 8209 544 to 1       544/546
(99 %)
1 diff
(99.9 %id)
AW769080 colon, moderately-differentiated adenocarcinoma .a 7668 to 8093 427 to 1       427/460
(92 %)
37 diff
(92.0 %id)
FN118564 breast carcinoma .a 7670 to 7763 1 to 93       93/94
(98 %)
4 diff
(95.8 %id)
AW029178 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 7672 to 8209 537 to 1       537/596
(90 %)
6 diff
(99.0 %id)
BU620031 Cell Line, Chondrosarcoma .a 7679 to 8289 626 to 16   AAA   611/611
(100 %)
1 diff
(99.9 %id)
CA771217 Pancreas, Purified pancreatic islet .a 7682 to 8292 615 to 5       611/615
(99 %)
0 diff
(100 %id)
BU676069 lung, Primary Lung Epithelial Cells .a 7694 to 8291 615 to 19   AAA   597/597
(100 %)
6 diff
(99.0 %id)
CK819647 Islets of Langerhans, Pancreas .a 7710 to 8290 585 to 5       581/585
(99 %)
0 diff
(100 %id)
AW769551 colon, moderately-differentiated adenocarcinoma .a 7724 to 8209 485 to 1       485/485
(100 %)
2 diff
(99.6 %id)
AA453176   .a 7727 to 8289 576 to 13   AAA   564/564
(100 %)
6 diff
(99.0 %id)
BE091396 breast .a 7732 to 8226 18 to 511       494/526
(93 %)
10 diff
(98.1 %id)
AU157822 placenta .a 7733 to 8209 476 to 1       476/478
(99 %)
2 diff
(99.6 %id)
BM129429 Islets of Langerhans, Pancreas .a 7736 to 8290 559 to 5       555/559
(99 %)
0 diff
(100 %id)
AU154536   .a 7749 to 8289 540 to 1       540/540
(100 %)
8 diff
(98.6 %id)
AA746485 germinal center B cell .a 7781 to 8289 521 to 12   AAA   510/510
(100 %)
6 diff
(98.9 %id)
BM141700 Islets of Langerhans, Pancreas .a 7788 to 8290 507 to 5   fully sequenced,   503/507
(99 %)
0 diff
(100 %id)
BQ025557 placenta .a 7789 to 8289 516 to 16   AAA   501/501
(100 %)
5 diff
(99.1 %id)
AW152454 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 7802 to 8216 415 to 1       415/415
(100 %)
1 diff
(99.8 %id)
AI584172 adenocarcinoma, Pancreas .a 7817 to 8290 473 to 2       472/488
(96 %)
6 diff
(98.8 %id)
BG026395 Bone, osteosarcoma, cell line .a 7821 to 8289 1 to 469   AAA   469/469
(100 %)
1 diff
(99.8 %id)
DN920274   .a 7824 to 8289 467 to 2       466/467
(99 %)
0 diff
(100 %id)
AA551327 Schwannoma tumor .a 7824 to 8288 466 to 1       466/471
(98 %)
18 diff
(96.2 %id)
AI288527 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 7838 to 8289 452 to 1       452/452
(100 %)
1 diff
(99.8 %id)
BE859077 Prostate .a 7839 to 8292 461 to 8   tiling clone,   454/461
(98 %)
0 diff
(100 %id)
AA731840 germinal center B cell .a 7842 to 8289 459 to 12   AAA   448/448
(100 %)
1 diff
(99.8 %id)
AW976047   .a 7849 to 8289 108 to 548   AAA   441/548
(80 %)
6 diff
(99.0 %id)
AA747410 Ewing's sarcoma .a 7849 to 8180 8 to 339       332/339
(97 %)
6 diff
(98.3 %id)
AA730649 Ewing's sarcoma .a 7852 to 8095 1 to 244       244/244
(100 %)
10 diff
(96.0 %id)
AA805293 germinal center B cell .a 7880 to 8289 424 to 12   AAA   413/413
(100 %)
24 diff
(94.2 %id)
BG201544   .a 7919 to 8209 1 to 289   AAA   289/290
(99 %)
6 diff
(98.0 %id)
BG216257   .a 7919 to 8114 44 to 239       196/239
(82 %)
7 diff
(97.1 %id)
BG195303   .a 7920 to 8182 55 to 317       263/317
(82 %)
6 diff
(98.2 %id)
BG195302   .a 7921 to 8211 1 to 291       291/312
(93 %)
3 diff
(99.1 %id)
BG181209   .a 7925 to 8178 56 to 310       255/310
(82 %)
6 diff
(98.1 %id)
BG214540   .a 7925 to 8209 7 to 292   AAA   286/292
(97 %)
11 diff
(96.3 %id)
AW779360 Kidney .a 7925 to 8093 169 to 1       169/169
(100 %)
10 diff
(94.1 %id)
BE503716 pooled germ cell tumors .a 7925 to 8093 169 to 1       169/169
(100 %)
3 diff
(98.3 %id)
BG197311   .a 7988 to 8211 1 to 224       224/224
(100 %)
3 diff
(98.7 %id)
FN055058 breast carcinoma .a 8097 to 8204 1 to 108       108/108
(100 %)
0 diff
(100 %id)
FN051936 breast carcinoma .a 8161 to 8209 51 to 2     Submitted on the opposite strand 50/51
(98 %)
0 diff
(100 %id)
BX476618   .b 1 to 654 1 to 653   tiling clone,   653/653
(100 %)
9 diff
(98.7 %id)
BX476619   .b 2266 to 2888 640 to 19   tiling clone,   622/640
(97 %)
1 diff
(99.9 %id)
BX476608   .c 1 to 641 1 to 642   tiling clone,   642/642
(100 %)
3 diff
(99.6 %id)
BM459025 melanotic melanoma, skin .c 743 to 1668 13 to 945   tiling clone,   933/1011
(92 %)
28 diff
(97.3 %id)
CN260555 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 909 to 1399 1 to 491   tiling clone,   491/491
(100 %)
1 diff
(99.8 %id)
AB208847 brain .d 1 to 5190 1 to 5190 exact tiling clone,   5190/5190
(100 %)
3 diff
(100.0 %id)
DB239486 trachea .d 1092 to 1675 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
AK131535 brain .d 1628 to 5110 1 to 3483   tiling clone, available from FLJ,   3483/3483
(100 %)
1 diff
(100.0 %id)
DA220000 brain .d 1629 to 2182 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
AK024078 whole embryo, mainly head .d 2678 to 4539 1 to 1863   available from FLJ,   1863/1863
(100 %)
4 diff
(99.8 %id)
AU117004 whole embryo, mainly head .d 2679 to 3405 2 to 734   capped   733/755
(97 %)
15 diff
(98.1 %id)
CD696586 normal nasopharynx .d 2688 to 3247 589 to 30     Submitted on the opposite strand 560/589
(95 %)
0 diff
(100 %id)
BQ940681 sciatic nerve .d 2966 to 3849 1 to 899       899/903
(99 %)
17 diff
(98.2 %id)
CA489384   .d 3086 to 3928 1 to 850       850/903
(94 %)
22 diff
(97.6 %id)
AV687616 hepatocellular carcinoma .d 3213 to 3902 1 to 682       682/686
(99 %)
27 diff
(96.1 %id)
AV689543 hepatocellular carcinoma .d 3213 to 3607 1 to 392       392/401
(97 %)
14 diff
(96.6 %id)
TI_57167958   .d 3310 to 4130 31 to 850       820/850
(96 %)
6 diff
(99.3 %id)
BI837105 pooled pancreas and spleen .d 3311 to 4130 1 to 819       819/819
(100 %)
10 diff
(98.8 %id)
BF332508 breast .d 3637 to 3984 350 to 3       348/350
(99 %)
0 diff
(100 %id)
BM129153 Islets of Langerhans, Pancreas .d 4262 to 4795 1 to 534       534/534
(100 %)
1 diff
(99.9 %id)
AU143947 whole embryo, mainly head .d 4322 to 4539 218 to 1       218/218
(100 %)
2 diff
(99.1 %id)
AW978820   .d 4541 to 5189 649 to 1     Submitted on the opposite strand 649/649
(100 %)
5 diff
(99.3 %id)
DB304926 brain .d 4580 to 5110 531 to 1       531/531
(100 %)
1 diff
(99.9 %id)
AI446685 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 4711 to 5112 407 to 6       402/407
(98 %)
0 diff
(100 %id)
AW103167 pooled .d 4725 to 5111 1 to 392     Submitted on the opposite strand 392/392
(100 %)
7 diff
(98.3 %id)
AI962936 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 4727 to 5240 1 to 514   tiling clone, Submitted on the opposite strand 514/514
(100 %)
3 diff
(99.5 %id)
AA642769 alveolar rhabdomyosarcoma .d 4730 to 5079 358 to 9       350/358
(97 %)
0 diff
(100 %id)
BF110182 carcinoid, lung .d 4739 to 5193 464 to 8       457/464
(98 %)
0 diff
(100 %id)
AI279279 carcinoid, lung .d 4750 to 5193 446 to 5       442/446
(99 %)
0 diff
(100 %id)
AA837410 germinal center B cell .d 4766 to 5190 435 to 11   AAA   425/425
(100 %)
2 diff
(99.6 %id)
BG191706   .d 4818 to 5193 1 to 375       375/378
(99 %)
12 diff
(96.9 %id)
BG184889   .d 4820 to 5190 1 to 369   AAA   369/370
(99 %)
6 diff
(98.4 %id)
BG208865   .d 4820 to 5192 1 to 369   AAA   369/371
(99 %)
6 diff
(98.4 %id)
BG221227   .d 4821 to 5192 1 to 372       372/376
(98 %)
6 diff
(98.5 %id)
BG189101   .d 4823 to 5190 1 to 368   AAA   368/368
(100 %)
4 diff
(99.0 %id)
AI871554 carcinoid, lung .d 4823 to 5193 371 to 1       371/380
(97 %)
1 diff
(99.8 %id)
BG192205   .d 4824 to 5192 1 to 368   AAA   368/368
(100 %)
3 diff
(99.2 %id)
BG210328   .d 4825 to 5190 3 to 367   AAA   365/367
(99 %)
14 diff
(96.2 %id)
AI027417 parathyroid gland, parathyroid tumor .d 4826 to 5190 385 to 21   AAA   365/365
(100 %)
1 diff
(99.8 %id)
AI088580 uterus .d 4826 to 5191 369 to 4       366/369
(99 %)
0 diff
(100 %id)
BG201951   .d 4830 to 5195 46 to 410       365/846
(43 %)
5 diff
(99.5 %id)
BG182288   .d 4834 to 5190 1 to 357   AAA   357/357
(100 %)
7 diff
(98.1 %id)
BG194892   .d 4835 to 5190 1 to 355   AAA   355/355
(100 %)
7 diff
(98.1 %id)
BG208221   .d 4835 to 5190 1 to 354   AAA   354/354
(100 %)
7 diff
(98.1 %id)
AW237573 Kidney .d 4837 to 5192 356 to 1       356/356
(100 %)
1 diff
(99.8 %id)
BG204028   .d 4848 to 5190 38 to 380   AAA   343/380
(90 %)
6 diff
(98.5 %id)
AI689705 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 4865 to 5193 334 to 6       329/338
(97 %)
0 diff
(100 %id)
BG218245   .d 4889 to 5172 1 to 286       286/286
(100 %)
9 diff
(96.9 %id)
CF454052 peripheral nervous system .e-u 1 to 760 32 to 791 exact tiling clone,   760/792
(95 %)
3 diff
(99.7 %id)
BX102113 pooled .e-u 379 to 920 1 to 542   tiling clone,   542/543
(99 %)
3 diff
(99.5 %id)
AW169891 pooled .e-u 857 to 1435 584 to 1   tiling clone,   584/584
(100 %)
13 diff
(97.8 %id)
AA904985 pooled .e-u 1204 to 1435 232 to 1   tiling clone,   232/232
(100 %)
2 diff
(99.2 %id)
DB024550 testis .f 1 to 551 2 to 552 L124P tiling clone, capped   551/551
(100 %)
1 diff
(99.9 %id)
CD644383 Embryonic Stem cells .g 1 to 725 12 to 734 N76T L77S S78A S79V N80I ... tiling clone,   723/734
(98 %)
11 diff
(98.6 %id)
BF207474 bladder, carcinoma, cell line .h 1 to 691 1 to 679   tiling clone,   679/826
(82 %)
47 diff
(94.4 %id)
DN917134   .h 222 to 877 1 to 651   tiling clone,   651/654
(99 %)
8 diff
(98.8 %id)
CD642306 Embryonic Stem cells .h 540 to 1369 13 to 833 Q112R I113F M115* tiling clone,   821/840
(97 %)
30 diff
(96.5 %id)
BX507341 Liver .i 1 to 625 1 to 623   tiling clone,   623/623
(100 %)
2 diff
(99.7 %id)
FN147451 breast carcinoma .i 340 to 437 1 to 99       99/99
(100 %)
1 diff
(99.0 %id)
DB223959 trachea .i 553 to 1021 2 to 470 exact tiling clone, capped   469/469
(100 %)
0 diff
(100 %id)
AA504255 germinal center B cell .j 1 to 631 650 to 12 V2I tiling clone, AAA   635/635
(100 %)
4 diff
(99.4 %id)
AI394218 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j 132 to 714 584 to 3   tiling clone,   582/584
(99 %)
6 diff
(99.0 %id)
AI078770 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j 233 to 712 483 to 4       480/483
(99 %)
0 diff
(100 %id)
AI127664 uterus .j 235 to 712 481 to 4       478/481
(99 %)
0 diff
(100 %id)
AA969753 pooled .j 262 to 631 370 to 1       370/370
(100 %)
1 diff
(99.8 %id)
AI280393 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j 308 to 713 406 to 1       406/406
(100 %)
1 diff
(99.8 %id)
BG998823 head_neck .k 1 to 223 14 to 236 D37E W42G tiling clone,   223/236
(94 %)
6 diff
(97.5 %id)
BX508821   .l 1 to 765 1 to 766 Q28H W29N N30G T31I I32L ... tiling clone,   766/766
(100 %)
2 diff
(99.8 %id)
CA503113 Human Lung Epithelial cells, lung .m-u 1 to 674 732 to 59 exact tiling clone, AAA   674/717
(94 %)
0 diff
(100 %id)
DA095932 cerebellum .n-u 1 to 565 2 to 567 L7F tiling clone, capped   566/566
(100 %)
2 diff
(99.7 %id)
BE935838 nervous_normal .o-u 1 to 448 6 to 450       445/450
(98 %)
10 diff
(97.8 %id)
BF959038 nervous_normal .o-u 1 to 448 20 to 466       447/466
(95 %)
7 diff
(98.5 %id)
BE935846 nervous_normal .o-u 10 to 448 14 to 452       439/452
(97 %)
6 diff
(98.7 %id)
BF952218 nervous_normal .o-u 10 to 450 465 to 25   tiling clone,   441/465
(94 %)
0 diff
(100 %id)
T47162.
matches multiple genes
ovary .o-u 28 to 174 293 to 444   tiling clone, also hits gene smoydobu 152/446
(34 %)
6 diff
(98.7 %id)
CV391749 nervous_normal .o-u 196 to 448 1 to 254       254/254
(100 %)
19 diff
(92.6 %id)
T47163.
matches multiple genes
ovary .o-u 246 to 545 303 to 1 E24X R26X tiling clone, also hits gene smoydobu 303/303
(100 %)
5 diff
(98.4 %id)
CA393768 eye, RPE/choroid .p-u 1 to 509 1 to 509 exact tiling clone,   509/509
(100 %)
2 diff
(99.7 %id)
BE841110 stomach_normal .q-u 1 to 287 16 to 300 K3R P4L L5Y Q6K E7K ... tiling clone,   285/300
(95 %)
6 diff
(98.0 %id)
DW440900 Liver .r 1 to 260 123 to 382 exact tiling clone,   260/382
(68 %)
7 diff
(98.2 %id)
BF083883 colon .s-u 1 to 170 170 to 3 N34T T35L A36L G37V L38* tiling clone,   168/171
(98 %)
0 diff
(100 %id)
AV704153 adrenal gland Gene ATR, variant not shown         Suspected internal deletion, this clone was ignored    
AV728129 hypothalamus Gene ATR, variant not shown         Suspected internal deletion, this clone was ignored    
AV653701 corresponding non cancerous liver tissue Gene ATR, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
DA339801 hippocampus Gene ATR, variant not shown       capped This clone was ignored    
DB311574 thalamus Gene ATR, variant not shown         This clone was ignored    
DA384251 thalamus Gene ATR, variant not shown       capped This clone was ignored    
AI285634 lymph node, mantle cell lymphoma Gene ATR, variant not shown         This clone was ignored    
BG392173 embryonal carcinoma, cell line, testis Gene ATR, variant not shown         This clone was ignored    
DB241224 trachea Gene ATR, variant not shown       capped This clone was ignored    
DB350613 trachea Gene ATR, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g, .h, .i, .j, .k, .l, .m-u, .n-u, .o-u, .p-u, .q-u, .r, .s-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI