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Gene ATPIF1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
480 supporting clones for gene ATPIF1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BE258824 eye, retinoblastoma .a 1 to 717 1 to 713 T2A D4H C5X L7C R8G ... tiling clone,   713/713
(100 %)
20 diff
(97.2 %id)
BE253195 eye, retinoblastoma .a 255 to 886 1 to 632       632/633
(99 %)
1 diff
(99.9 %id)
CF144371 CNCAP(3)T-225 cell line, Prostate .a 315 to 765 1 to 451       451/451
(100 %)
7 diff
(98.5 %id)
CF144450 CNCAP(3)T-225 cell line, Prostate .a 315 to 825 1 to 511       511/511
(100 %)
6 diff
(98.9 %id)
BG494590 lung, mucoepidermoid carcinoma .a 318 to 973 1 to 655       655/655
(100 %)
6 diff
(99.1 %id)
TI_154176357   .a 322 to 1142 80 to 916       837/985
(84 %)
54 diff
(94.6 %id)
TI_154176453   .a 322 to 1049 80 to 817       738/1194
(61 %)
28 diff
(97.7 %id)
TI_154176534   .a 322 to 867 80 to 630       551/551
(100 %)
13 diff
(97.7 %id)
BM789336 Ascites, stomach .a 347 to 978 1 to 632       632/632
(100 %)
2 diff
(99.7 %id)
BM791546 Ascites, stomach .a 347 to 1022 1 to 676       676/676
(100 %)
2 diff
(99.8 %id)
AW374418 colon .a 367 to 592 226 to 1       226/226
(100 %)
0 diff
(100 %id)
BG478976 choriocarcinoma, placenta .a 416 to 1328 1 to 905   tiling clone,   905/906
(99 %)
27 diff
(97.1 %id)
EL954898 eyeball .a 430 to 838 1 to 409       409/409
(100 %)
7 diff
(98.3 %id)
BE252033 eye, retinoblastoma .a 436 to 1041 1 to 604       604/620
(97 %)
6 diff
(99.1 %id)
BG757116 B-cells, primary B-cells from tonsils (cell line) .a 449 to 1191 1 to 744       744/756
(98 %)
15 diff
(98.1 %id)
W22381 eye, retina .a 453 to 793 430 to 90       341/547
(62 %)
0 diff
(100 %id)
BE084238 breast .a 545 to 675 128 to 1     Submitted on the opposite strand 128/143
(89 %)
4 diff
(97.3 %id)
CB959129 Pooled-Glandular .a 593 to 1296 1 to 718       718/747
(96 %)
24 diff
(96.8 %id)
CB961444 placenta, pre-eclamptic placenta .a 608 to 1260 29 to 686       658/777
(84 %)
6 diff
(99.3 %id)
CB162326 Liver .a 699 to 1283 1 to 585       585/585
(100 %)
0 diff
(100 %id)
TI_151763875   .a 937 to 1355 478 to 61   tiling clone,   418/1019
(41 %)
0 diff
(100 %id)
FN177530 breast carcinoma .a 1142 to 1218 1 to 76       76/77
(98 %)
5 diff
(93.6 %id)
FN153060 breast carcinoma .a 1391 to 1473 82 to 1   tiling clone, Submitted on the opposite strand 82/83
(98 %)
1 diff
(98.8 %id)
BP271519   .b 1 to 524 9 to 532 exact tiling clone,   532/599
(88 %)
1 diff
(99.9 %id)
AU098757   .b 1 to 277 24 to 300       281/300
(93 %)
6 diff
(98.0 %id)
NM_016311.3   .b 1 to 522 4 to 525 exact RefSeq, AAA   525/525
(100 %)
0 diff
(100 %id)
BP328047 prostata .b 1 to 522 4 to 525 exact AAA   525/525
(100 %)
0 diff
(100 %id)
AU076545   .b 1 to 131 2 to 132       132/132
(100 %)
0 diff
(100 %id)
BP380306 uterus .b 1 to 522 2 to 523 exact     523/533
(98 %)
1 diff
(99.9 %id)
BP371640 testis .b 1 to 522 1 to 520 N32S AAA   520/520
(100 %)
5 diff
(99.1 %id)
AK316600 skeletal muscle .b 2 to 402 1 to 401 exact     401/401
(100 %)
1 diff
(99.8 %id)
DA896035 skeletal muscle .b 3 to 523 2 to 522 exact capped   521/521
(100 %)
1 diff
(99.9 %id)
CD673086 eye, Iris .b 6 to 522 1 to 517 exact AAA   517/517
(100 %)
4 diff
(99.3 %id)
BU602112 mixed (pool of 40 RNAs) .b 7 to 524 1 to 518 exact     518/550
(94 %)
6 diff
(99.0 %id)
BQ278745 adenocarcinoma, cell line, breast .b 8 to 522 1 to 515 exact AAA   515/515
(100 %)
1 diff
(99.9 %id)
DN995547 breast cancer, Mammary gland (cancer tissue) .b 16 to 522 9 to 515 exact AAA   507/515
(98 %)
6 diff
(98.9 %id)
CB156216 brain .b 19 to 529 1 to 511 exact AAA   511/511
(100 %)
0 diff
(100 %id)
BU601462 mixed (pool of 40 RNAs) .b 19 to 521 1 to 503 exact AAA   503/503
(100 %)
5 diff
(99.1 %id)
BP213313 cerebrum .b 22 to 529 1 to 507 exact     507/514
(98 %)
5 diff
(99.1 %id)
BU502348 mixed (pool of 40 RNAs) .b 22 to 518 1 to 497 exact     497/498
(99 %)
3 diff
(99.4 %id)
BX330572 Placenta Cot 25-normalized .b 24 to 521 499 to 1 exact     499/499
(100 %)
3 diff
(99.4 %id)
BX339116 Placenta Cot 25-normalized .b 24 to 467 450 to 8 F47S G48E K49R R50E E51S ...     443/450
(98 %)
1 diff
(99.8 %id)
BX339117 Placenta Cot 25-normalized .b 24 to 524 1 to 501 exact     501/501
(100 %)
0 diff
(100 %id)
BG681942 skin, squamous cell carcinoma .b 24 to 522 1 to 500 exact AAA   500/500
(100 %)
1 diff
(99.8 %id)
CF995492 Pooled Chondrosarcoma Tumor cells .b 24 to 524 1 to 502 E76R E77R I78N V79R H80S ...     502/530
(94 %)
8 diff
(98.5 %id)
DB504587 hypothalamus .b 25 to 493 1 to 469 exact     469/469
(100 %)
0 diff
(100 %id)
BF973051 leiomyosarcoma cell line, uterus .b 30 to 522 1 to 493 G44C K90N AAA   493/493
(100 %)
4 diff
(99.2 %id)
BG336875 leiomyosarcoma cell line, uterus .b 30 to 522 1 to 493 G44C AAA   493/493
(100 %)
3 diff
(99.4 %id)
BG337263 leiomyosarcoma cell line, uterus .b 30 to 522 1 to 493 G44C AAA   493/493
(100 %)
3 diff
(99.4 %id)
BG337274 leiomyosarcoma cell line, uterus .b 30 to 522 1 to 493 G44C AAA   493/493
(100 %)
3 diff
(99.4 %id)
BG385894 adenocarcinoma cell line, colon .b 30 to 522 1 to 493 exact AAA   493/493
(100 %)
1 diff
(99.8 %id)
BG755982 B-cells, primary B-cells from tonsils (cell line) .b 30 to 522 1 to 493 exact AAA   493/493
(100 %)
1 diff
(99.8 %id)
AF114836   .b 31 to 524 127 to 622 exact     496/628
(78 %)
8 diff
(98.8 %id)
AJ573897 pectoral muscle (after mastectomy) .b 31 to 479 1 to 448 exact     448/448
(100 %)
1 diff
(99.8 %id)
AJ712979 bone marrow .b 31 to 470 1 to 440 exact     440/441
(99 %)
3 diff
(99.4 %id)
BC009677 Lung, large cell carcinoma .b 31 to 522 1 to 492 exact available from MGC, AAA   492/492
(100 %)
0 diff
(100 %id)
CN420844 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 31 to 522 1 to 492 exact AAA   492/492
(100 %)
0 diff
(100 %id)
BM710184 eye, optic nerve .b 31 to 522 1 to 492 exact fully sequenced,   492/492
(100 %)
1 diff
(99.8 %id)
BI196239 brain, neuroblastoma .b 32 to 522 1 to 495 Q89C K90R E91K I92K E93L ... AAA   495/495
(100 %)
5 diff
(99.0 %id)
BQ062838 lymph, lymphoma, cell line .b 32 to 522 1 to 491 G24S AAA   491/491
(100 %)
6 diff
(98.8 %id)
BM844257 lymph node, stomach .b 32 to 503 1 to 471 exact     471/471
(100 %)
1 diff
(99.8 %id)
BG337531 leiomyosarcoma cell line, uterus .b 33 to 529 1 to 497 exact AAA   497/497
(100 %)
1 diff
(99.8 %id)
BQ073337 epidermoid carcinoma, cell line, lung .b 33 to 522 1 to 490 exact AAA   490/490
(100 %)
1 diff
(99.8 %id)
BQ065460 lymph, lymphoma, cell line .b 33 to 522 1 to 490 exact AAA   490/490
(100 %)
2 diff
(99.6 %id)
BQ924584 large cell carcinoma, lung .b 33 to 522 1 to 490 exact AAA   490/490
(100 %)
0 diff
(100 %id)
BQ931511 epidermoid carcinoma, cell line, lung .b 33 to 522 1 to 490 exact AAA   490/490
(100 %)
1 diff
(99.8 %id)
BU854961 ovary, teratocarcinoma, cell line .b 33 to 522 1 to 490 exact AAA   490/490
(100 %)
0 diff
(100 %id)
BM689173 eye, eye anterior segment .b 34 to 317 9 to 292   fully sequenced,   284/292
(97 %)
7 diff
(97.7 %id)
CN420846 embryonic stem cells, DMSO-treated H9 cellline .b 35 to 522 1 to 488 exact AAA   488/488
(100 %)
4 diff
(99.2 %id)
AA927369 pooled germ cell tumors .b 35 to 524 490 to 2 Q21H A22S R23P G24R F25L ...     489/490
(99 %)
3 diff
(99.4 %id)
BU539652 adenocarcinoma, cell line, breast .b 35 to 522 1 to 488 exact AAA   488/488
(100 %)
1 diff
(99.8 %id)
AJ571782 pectoral muscle (after mastectomy) .b 36 to 472 9 to 447 Q52S A53R E54L E55K E56R ...     439/447
(98 %)
8 diff
(98.3 %id)
BU163117 ductal carcinoma, cell line, Pancreas .b 36 to 522 1 to 487 exact AAA   487/487
(100 %)
0 diff
(100 %id)
BG398319 B-cells, primary B-cells from tonsils (cell line) .b 37 to 522 1 to 485 exact AAA   485/485
(100 %)
2 diff
(99.6 %id)
BQ066497 lymph, lymphoma, cell line .b 40 to 522 1 to 483 exact AAA   483/483
(100 %)
1 diff
(99.8 %id)
BM796602 Ascites, stomach .b 40 to 478 1 to 439 K82N Q89H     439/439
(100 %)
3 diff
(99.4 %id)
AA380255   .b 41 to 330 1 to 290       290/290
(100 %)
2 diff
(99.4 %id)
BM797307 Ascites, stomach .b 41 to 526 1 to 486 A46V     486/486
(100 %)
1 diff
(99.8 %id)
F31569 pectoral muscle (after mastectomy) .b 42 to 404 1 to 362 T19I Q21K S27W R35G     362/362
(100 %)
7 diff
(98.1 %id)
BF971699 leiomyosarcoma cell line, uterus .b 46 to 522 1 to 477 exact AAA   477/477
(100 %)
1 diff
(99.8 %id)
BG714224 brain, hypothalamus .b 46 to 522 1 to 476 exact AAA   476/476
(100 %)
4 diff
(99.2 %id)
BI460597 testis .b 46 to 522 1 to 474 W15G G16A V17* AAA   474/474
(100 %)
7 diff
(98.6 %id)
BI603541 brain, hypothalamus .b 46 to 522 1 to 474 H80I H81I K82R K83R E84R ... AAA   474/474
(100 %)
4 diff
(99.2 %id)
BI601557 brain, hypothalamus .b 46 to 522 1 to 476 K72E AAA   476/476
(100 %)
3 diff
(99.4 %id)
BI666626 brain, hypothalamus .b 46 to 522 1 to 477 K83N E84G I85D E86* AAA   477/477
(100 %)
5 diff
(99.0 %id)
BI667878 brain, hypothalamus .b 46 to 520 1 to 474 exact AAA   474/474
(100 %)
3 diff
(99.4 %id)
TI_45210115   .b 47 to 522 87 to 559 H80I H81I K82R K83R E84R ... AAA   473/559
(84 %)
7 diff
(98.8 %id)
TI_45215406   .b 47 to 522 132 to 606 K72E AAA   475/606
(78 %)
7 diff
(98.9 %id)
TI_44342651   .b 47 to 522 89 to 564 K83N E84G I85D E86* AAA   476/564
(84 %)
7 diff
(98.8 %id)
TI_44343994   .b 47 to 520 87 to 559 exact AAA   473/559
(84 %)
6 diff
(99.0 %id)
BU602183 mixed (pool of 40 RNAs) .b 49 to 522 1 to 474 exact     474/478
(99 %)
2 diff
(99.6 %id)
BU840139 epithelioid carcinoma cell line, Pancreas .b 51 to 522 145 to 615 exact tiling clone, AAA   471/481
(97 %)
7 diff
(98.6 %id)
CB134377 brain .b 52 to 522 1 to 471 exact AAA   471/471
(100 %)
1 diff
(99.8 %id)
DB466396 hippocampus .b 52 to 481 1 to 431 exact     431/431
(100 %)
2 diff
(99.6 %id)
DB482955 hippocampus .b 52 to 522 1 to 471 exact AAA   471/471
(100 %)
2 diff
(99.6 %id)
DB490264 hypothalamus .b 52 to 490 1 to 436 A5G L6W Q21R A22P G44V ...     436/436
(100 %)
20 diff
(95.5 %id)
AA180122 muscle, skeletal muscle .b 52 to 229 1 to 177   fully sequenced,   177/177
(100 %)
1 diff
(99.5 %id)
BE256127 eye, retinoblastoma .b 52 to 527 1 to 475 A46V     475/475
(100 %)
2 diff
(99.6 %id)
BE786397 large cell carcinoma, lung .b 52 to 524 1 to 473 exact     473/476
(99 %)
1 diff
(99.8 %id)
CK824020 insulinoma, Pancreas .b 52 to 517 466 to 1 exact     466/470
(99 %)
1 diff
(99.8 %id)
CB106412 Liver .b 52 to 398 1 to 347       347/347
(100 %)
2 diff
(99.5 %id)
BM759084 lymph node, stomach .b 52 to 519 1 to 468 exact     468/468
(100 %)
1 diff
(99.8 %id)
BM844263 lymph node, stomach .b 52 to 508 1 to 458 exact     458/458
(100 %)
1 diff
(99.8 %id)
DB575829 hypothalamus .b 53 to 522 1 to 470 exact   Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
TI_44342870   .b 53 to 524 121 to 592 exact     472/783
(60 %)
7 diff
(99.2 %id)
AA147873   .b 54 to 229 1 to 176   fully sequenced,   176/176
(100 %)
0 diff
(100 %id)
BU960960 mixed (pool of 40 RNAs) .b 55 to 518 1 to 464 exact     464/465
(99 %)
3 diff
(99.4 %id)
TI_45215120   .b 55 to 522 129 to 596 H74R AAA   468/596
(78 %)
8 diff
(98.7 %id)
CN420847 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 56 to 522 1 to 467 exact AAA   467/467
(100 %)
4 diff
(99.2 %id)
CN420843 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 57 to 522 1 to 466 exact AAA   466/466
(100 %)
4 diff
(99.2 %id)
BP418788 small intestine .b 57 to 524 1 to 468 exact   Submitted on the opposite strand 468/470
(99 %)
1 diff
(99.8 %id)
BF807053 colon_ins .b 58 to 364 38 to 353       292/363
(80 %)
21 diff
(94.3 %id)
BI602914 brain, hypothalamus .b 58 to 522 1 to 465 H74R AAA   465/465
(100 %)
6 diff
(98.8 %id)
BU536588 mixed (pool of 40 RNAs) .b 58 to 522 1 to 465 exact AAA   465/465
(100 %)
2 diff
(99.6 %id)
CN420845 embryonic stem cells, DMSO-treated H9 cellline .b 59 to 344 1 to 286       286/286
(100 %)
2 diff
(99.4 %id)
BU539766 adenocarcinoma, cell line, breast .b 59 to 522 1 to 464 exact AAA   464/464
(100 %)
2 diff
(99.6 %id)
AA304732 retina .b 60 to 409 1 to 354 A8X D28V Q29X E54X E75X ...     354/354
(100 %)
6 diff
(98.4 %id)
AB029042 heart .b 61 to 445 1 to 385 exact     385/385
(100 %)
0 diff
(100 %id)
BP212050 cerebrum .b 61 to 522 1 to 462 W15* AAA   462/462
(100 %)
1 diff
(99.8 %id)
DB487445 hypothalamus .b 61 to 498 1 to 437 R60E A61H Q62R S63V R64E ...     439/437
(100 %)
4 diff
(99.1 %id)
T69348 Liver .b 61 to 341 1 to 288   fully sequenced,   288/288
(100 %)
7 diff
(97.6 %id)
CB121372 Liver .b 61 to 520 1 to 460 exact     460/460
(100 %)
1 diff
(99.8 %id)
BM760407 lymph node, stomach .b 61 to 404 1 to 344 exact     344/344
(100 %)
0 diff
(100 %id)
BM845580 lymph node, stomach .b 61 to 522 1 to 461 exact AAA   461/461
(100 %)
2 diff
(99.6 %id)
BM845642 lymph node, stomach .b 61 to 504 1 to 445 V14C W15V V17R R18E T19D ...     445/445
(100 %)
1 diff
(99.8 %id)
BP373645 umbilical cord .b 61 to 522 1 to 462 exact AAA   462/462
(100 %)
0 diff
(100 %id)
DB551816 hippocampus .b 62 to 522 1 to 461 exact   Submitted on the opposite strand 461/461
(100 %)
1 diff
(99.8 %id)
BP211011 cerebellum .b 63 to 522 1 to 460 exact AAA   460/460
(100 %)
0 diff
(100 %id)
DB487808 hypothalamus .b 63 to 487 1 to 427 H74P E75*     427/427
(100 %)
5 diff
(98.9 %id)
DB498745 hypothalamus .b 63 to 522 1 to 460 Q29H R64K H74R AAA   460/460
(100 %)
6 diff
(98.7 %id)
DB569831 hypothalamus .b 63 to 520 1 to 458 H74R   Submitted on the opposite strand 458/460
(99 %)
3 diff
(99.4 %id)
CA455400 adenocarcinoma, cell line, breast .b 63 to 522 1 to 460 exact AAA   460/460
(100 %)
0 diff
(100 %id)
BU944886 mixed (pool of 40 RNAs) .b 64 to 520 1 to 457 exact     457/459
(99 %)
2 diff
(99.6 %id)
BF684523 leiomyosarcoma cell line, uterus .b 65 to 467 1 to 403 exact     403/403
(100 %)
0 diff
(100 %id)
AJ573938 pectoral muscle (after mastectomy) .b 66 to 504 1 to 439 G38A S39P I40S R41G E42K ...     439/439
(100 %)
2 diff
(99.6 %id)
BM887630 eye .b 67 to 521 1 to 456 W15X     456/488
(93 %)
3 diff
(99.4 %id)
EL948246 eyeball .b 67 to 520 1 to 454 exact     454/454
(100 %)
4 diff
(99.2 %id)
AA603343 normal prostate, Prostate .b 67 to 522 458 to 1 R23P G24R F25L G26R S27L ...     458/458
(100 %)
9 diff
(98.1 %id)
F27449 pectoral muscle (after mastectomy) .b 69 to 404 1 to 336 exact     336/336
(100 %)
5 diff
(98.6 %id)
F30644 pectoral muscle (after mastectomy) .b 69 to 445 1 to 377 H73Q     377/377
(100 %)
4 diff
(99.0 %id)
W74782 heart .b 70 to 521 1 to 463 L6X G13X R23Q G24R F25L ... fully sequenced,   463/463
(100 %)
13 diff
(97.2 %id)
BF237544 leiomyosarcoma cell line, uterus .b 70 to 522 1 to 453 exact AAA   453/453
(100 %)
0 diff
(100 %id)
BG337348 leiomyosarcoma cell line, uterus .b 70 to 522 1 to 453 exact AAA   453/453
(100 %)
0 diff
(100 %id)
BI824452 pooled brain, lung, testis .b 70 to 522 1 to 453 exact AAA   453/453
(100 %)
1 diff
(99.8 %id)
TI_57200957   .b 70 to 522 161 to 613 exact AAA   453/613
(73 %)
7 diff
(98.9 %id)
BX107329 heart .b 71 to 524 1 to 454 exact     454/456
(99 %)
1 diff
(99.8 %id)
AI720024 colon .b 71 to 522 452 to 1 H73X     452/452
(100 %)
1 diff
(99.8 %id)
BE395342 endometrium, adenocarcinoma cell line, uterus .b 72 to 522 1 to 451 exact AAA   451/451
(100 %)
0 diff
(100 %id)
AA194367 muscle, skeletal muscle .b 73 to 524 1 to 456 T10N W11V L12A G13W V14R ...   Submitted on the opposite strand 456/456
(100 %)
6 diff
(98.7 %id)
F26198 pectoral muscle (after mastectomy) .b 73 to 366 1 to 294       294/294
(100 %)
0 diff
(100 %id)
F31803 pectoral muscle (after mastectomy) .b 74 to 335 1 to 262       262/262
(100 %)
1 diff
(99.7 %id)
BG331172 large cell carcinoma, lung .b 75 to 522 1 to 447 exact AAA   447/447
(100 %)
2 diff
(99.6 %id)
BM560558 astrocytoma grade IV, cell line, brain .b 75 to 522 1 to 448 exact AAA   448/448
(100 %)
0 diff
(100 %id)
BQ711850 Spleen .b 76 to 522 1 to 447 exact AAA   447/447
(100 %)
0 diff
(100 %id)
BU500942 eye, normal pigmented retinal epithelium .b 76 to 529 1 to 454 exact     454/460
(98 %)
1 diff
(99.8 %id)
CA778365 Pancreas, Purified pancreatic islet .b 78 to 522 1 to 445 W11R fully sequenced, AAA   445/445
(100 %)
2 diff
(99.6 %id)
CN420848 embryonic stem cells, DMSO-treated H9 cellline .b 79 to 522 1 to 444 exact AAA   444/444
(100 %)
0 diff
(100 %id)
AA143638 Pancreas .b 79 to 523 1 to 446 G24X F25S G26A S27R D28I ... fully sequenced,   446/446
(100 %)
13 diff
(97.1 %id)
AI340193 2 pooled tumors (clear cell type), Kidney .b 79 to 524 449 to 4 exact     446/449
(99 %)
0 diff
(100 %id)
F27508 pectoral muscle (after mastectomy) .b 79 to 446 14 to 381 exact     368/381
(96 %)
6 diff
(98.5 %id)
AI217899   .b 81 to 524 446 to 3 exact     444/446
(99 %)
0 diff
(100 %id)
BT009849   .b 82 to 401 1 to 320       320/321
(99 %)
1 diff
(99.7 %id)
CR457097   .b 82 to 402 1 to 321 exact     321/321
(100 %)
0 diff
(100 %id)
AA722532 heart .b 82 to 522 441 to 1 exact     441/441
(100 %)
0 diff
(100 %id)
AI038560   .b 82 to 522 461 to 22 R23P G24R F25L G26R S27L ... AAA   440/440
(100 %)
3 diff
(99.4 %id)
AI095384 senescent fibroblast .b 82 to 524 446 to 5 M20I Q21A A22S R23P G24R ...     442/446
(99 %)
2 diff
(99.6 %id)
AI457563 pooled .b 82 to 524 447 to 5 H73P     443/447
(99 %)
0 diff
(100 %id)
DB557222 hypothalamus .b 84 to 520 1 to 434     Submitted on the opposite strand 434/436
(99 %)
17 diff
(96.2 %id)
AI720741 colon .b 85 to 529 448 to 4       445/448
(99 %)
0 diff
(100 %id)
BQ651029 hepatocellular carcinoma, cell line, Liver .b 85 to 522 1 to 438   AAA   438/438
(100 %)
0 diff
(100 %id)
AJ573067 pectoral muscle (after mastectomy) .b 89 to 519 1 to 430       430/430
(100 %)
5 diff
(98.9 %id)
AA494403 colon .b 91 to 523 432 to 1       432/432
(100 %)
8 diff
(98.2 %id)
AJ709842 heart .b 92 to 522 1 to 430   AAA   430/430
(100 %)
1 diff
(99.8 %id)
AJ709852 heart .b 92 to 522 1 to 431   AAA   431/431
(100 %)
0 diff
(100 %id)
DB556798 hypothalamus .b 92 to 520 1 to 429     Submitted on the opposite strand 429/431
(99 %)
2 diff
(99.6 %id)
DB560334 hypothalamus .b 92 to 520 1 to 431     Submitted on the opposite strand 431/433
(99 %)
4 diff
(99.1 %id)
AA252800 germinal center B cell .b 92 to 522 431 to 1       431/431
(100 %)
0 diff
(100 %id)
AA315596 colon .b 94 to 522 1 to 429       429/429
(100 %)
0 diff
(100 %id)
AI452498 pooled .b 94 to 524 435 to 5       431/435
(99 %)
0 diff
(100 %id)
BG336905 leiomyosarcoma cell line, uterus .b 95 to 522 1 to 428   AAA   428/428
(100 %)
1 diff
(99.8 %id)
AW886732 ovary .b 96 to 362 1 to 266       266/266
(100 %)
2 diff
(99.3 %id)
DB560308 hypothalamus .b 96 to 520 1 to 426     Submitted on the opposite strand 426/428
(99 %)
7 diff
(98.4 %id)
BE279835 choriocarcinoma, placenta .b 96 to 523 1 to 428       428/428
(100 %)
0 diff
(100 %id)
F29747 pectoral muscle (after mastectomy) .b 98 to 377 1 to 280       280/280
(100 %)
1 diff
(99.7 %id)
F26864 pectoral muscle (after mastectomy) .b 101 to 369 1 to 269       269/269
(100 %)
0 diff
(100 %id)
BC004955 Uterus, endometrium adenocarcinoma .b 106 to 522 1 to 417   available from MGC, AAA   417/417
(100 %)
0 diff
(100 %id)
BU557395 ovary, teratocarcinoma, cell line .b 106 to 522 1 to 417   AAA   417/417
(100 %)
0 diff
(100 %id)
AA934037 pooled germ cell tumors .b 109 to 523 412 to 1       412/412
(100 %)
3 diff
(99.3 %id)
AI086888 senescent fibroblast .b 109 to 524 420 to 5       416/420
(99 %)
0 diff
(100 %id)
F34141 pectoral muscle (after mastectomy) .b 110 to 507 1 to 398       398/398
(100 %)
4 diff
(99.0 %id)
BE268236 Burkitt lymphoma, lymph .b 111 to 524 1 to 414       414/415
(99 %)
1 diff
(99.8 %id)
AA194452 muscle, skeletal muscle .b 112 to 495 385 to 1     Submitted on the opposite strand 385/593
(64 %)
5 diff
(99.2 %id)
DB533177 hippocampus .b 116 to 524 1 to 411     Submitted on the opposite strand 411/415
(99 %)
14 diff
(96.7 %id)
AJ573283 pectoral muscle (after mastectomy) .b 119 to 524 1 to 406       406/409
(99 %)
3 diff
(99.3 %id)
BG026493 Bone, osteosarcoma, cell line .b 125 to 522 1 to 398   AAA   398/398
(100 %)
0 diff
(100 %id)
AA448874   .b 136 to 529 393 to 1       393/393
(100 %)
1 diff
(99.8 %id)
AA146630 Pancreas .b 138 to 522 383 to 1   fully sequenced,   383/383
(100 %)
2 diff
(99.5 %id)
F33054 pectoral muscle (after mastectomy) .b 141 to 524 1 to 384       384/390
(98 %)
2 diff
(99.5 %id)
AA937123 2 pooled tumors (clear cell type), Kidney .b 142 to 522 381 to 1       381/381
(100 %)
0 diff
(100 %id)
AA865938 Kidney .b 146 to 522 376 to 1       376/377
(99 %)
1 diff
(99.8 %id)
AJ709964 heart .b 158 to 523 1 to 366       366/366
(100 %)
2 diff
(99.5 %id)
AI741309 pooled .b 160 to 522 376 to 14   AAA   363/363
(100 %)
1 diff
(99.8 %id)
EC499213 Prostate .b 170 to 280 1 to 111       111/111
(100 %)
0 diff
(100 %id)
EC530905 Prostate .b 170 to 280 1 to 111       111/111
(100 %)
0 diff
(100 %id)
F19516 pectoral muscle (after mastectomy) .b 174 to 511 1 to 338       338/339
(99 %)
1 diff
(99.8 %id)
EC503203 Prostate .b 175 to 280 9 to 111       103/111
(92 %)
12 diff
(89.2 %id)
BU532140 mixed (pool of 40 RNAs) .b 176 to 522 1 to 347   AAA   347/347
(100 %)
2 diff
(99.5 %id)
BM876129 insulinoma, Pancreas .b 181 to 515 335 to 1       335/335
(100 %)
8 diff
(97.7 %id)
W74685 heart .b 199 to 522 336 to 13   fully sequenced, AAA   324/324
(100 %)
3 diff
(99.1 %id)
AA147836   .b 199 to 522 324 to 1   fully sequenced,   324/324
(100 %)
0 diff
(100 %id)
AA180220 muscle, skeletal muscle .b 199 to 515 316 to 1   fully sequenced,   316/316
(100 %)
4 diff
(98.8 %id)
F26227 pectoral muscle (after mastectomy) .b 203 to 415 1 to 213       213/213
(100 %)
2 diff
(99.1 %id)
CD677653 eye, Trabecular meshwork .b 212 to 522 1 to 311   AAA   311/311
(100 %)
0 diff
(100 %id)
AA557135 breast .b 218 to 522 305 to 1       305/305
(100 %)
0 diff
(100 %id)
BU537820 mixed (pool of 40 RNAs) .b 228 to 522 1 to 295   AAA   295/295
(100 %)
1 diff
(99.7 %id)
CA778068 Pancreas, Purified pancreatic islet .b 230 to 524 294 to 1   fully sequenced,   294/294
(100 %)
8 diff
(97.3 %id)
BM671607 eye, optic nerve .b 230 to 522 311 to 19   fully sequenced, AAA   293/293
(100 %)
2 diff
(99.4 %id)
FN148953 breast carcinoma .b 232 to 328 94 to 1     Submitted on the opposite strand 94/94
(100 %)
3 diff
(96.9 %id)
AW769872 lymph node, lymphoma, follicular mixed small and largecell .b 233 to 522 300 to 11   AAA   290/290
(100 %)
2 diff
(99.4 %id)
BF054691 brain, oligodendroglioma .b 240 to 521 1 to 283   AAA   283/283
(100 %)
2 diff
(99.3 %id)
AA626141   .b 258 to 397 140 to 1       140/142
(98 %)
15 diff
(89.5 %id)
AA669752 lung, lung carcinoma .b 259 to 520 262 to 1       262/262
(100 %)
4 diff
(98.5 %id)
BM798650 myeloma .b 269 to 522 1 to 256   AAA   256/256
(100 %)
2 diff
(99.3 %id)
AA157491   .b 270 to 522 1 to 252   AAA   252/252
(100 %)
3 diff
(98.9 %id)
BU730511 eye, RPE and Choroid .b 271 to 522 270 to 19   AAA   252/252
(100 %)
1 diff
(99.7 %id)
EC573588 Prostate .b 275 to 372 6 to 101       96/101
(95 %)
10 diff
(90.1 %id)
CF529120 placenta .b 290 to 521 249 to 18   AAA   232/232
(100 %)
1 diff
(99.6 %id)
BF092619 testis_normal .b 299 to 462 187 to 24       164/194
(84 %)
0 diff
(100 %id)
T69273 Liver .b 311 to 522 212 to 1   fully sequenced,   212/212
(100 %)
4 diff
(98.2 %id)
BM662569 eye, eye anterior segment .b 314 to 529 234 to 19   fully sequenced, AAA   216/216
(100 %)
0 diff
(100 %id)
FN123536 breast carcinoma .b 317 to 406 1 to 90       90/90
(100 %)
1 diff
(98.9 %id)
AA365295 pineal body .b 333 to 522 1 to 190       190/190
(100 %)
0 diff
(100 %id)
AA365906 pineal body .b 350 to 522 1 to 173       173/173
(100 %)
0 diff
(100 %id)
AW954001   .b 351 to 522 1 to 172   AAA   172/172
(100 %)
0 diff
(100 %id)
FN050596 breast carcinoma .b 360 to 424 1 to 65       65/65
(100 %)
1 diff
(98.5 %id)
EC455732 Prostate .b 370 to 448 1 to 79       79/79
(100 %)
1 diff
(98.8 %id)
AI474046 Kidney .b 374 to 529 175 to 20   AAA   156/156
(100 %)
1 diff
(99.4 %id)
BY999237   .b 375 to 524 1 to 150     Submitted on the opposite strand 150/151
(99 %)
1 diff
(99.4 %id)
BY999800   .b 375 to 524 1 to 150     Submitted on the opposite strand 150/151
(99 %)
1 diff
(99.4 %id)
D12180 Liver .b 375 to 522 1 to 147       147/147
(100 %)
1 diff
(99.4 %id)
T60954 Liver .b 406 to 523 1 to 119       119/119
(100 %)
6 diff
(95.0 %id)
AW772676 hepatic adenoma, Liver .b 410 to 515 1 to 106       106/106
(100 %)
0 diff
(100 %id)
EC556112 Prostate .b 428 to 521 97 to 3       95/97
(97 %)
0 diff
(100 %id)
EC459623 Prostate .b 432 to 521 92 to 3       90/92
(97 %)
0 diff
(100 %id)
FN067437 breast carcinoma .b 450 to 521 1 to 72       72/75
(96 %)
2 diff
(97.4 %id)
FN152934 breast carcinoma .b 454 to 520 67 to 2     Submitted on the opposite strand 66/67
(98 %)
0 diff
(100 %id)
GD146547   .b 456 to 522 1 to 66   AAA   66/66
(100 %)
1 diff
(98.5 %id)
GD151589   .b 456 to 524 1 to 69       69/80
(86 %)
3 diff
(96.3 %id)
GD152033   .b 456 to 524 1 to 69       69/83
(83 %)
2 diff
(97.6 %id)
GD155764   .b 456 to 522 1 to 68   AAA   68/68
(100 %)
4 diff
(94.2 %id)
GD146540   .b 458 to 525 1 to 68       68/75
(90 %)
4 diff
(94.7 %id)
EC510802 Prostate .b 461 to 521 5 to 65       61/69
(88 %)
3 diff
(95.7 %id)
GD157757   .b 461 to 522 7 to 68   AAA   62/68
(91 %)
6 diff
(91.2 %id)
AJ708612 heart .c 1 to 415 1 to 415 exact tiling clone,   415/415
(100 %)
1 diff
(99.8 %id)
BM876383 insulinoma, Pancreas .c 8 to 178 1 to 171       171/171
(100 %)
4 diff
(97.7 %id)
AA323119 brain, cerebellum .c 15 to 201 1 to 187   tiling clone,   187/187
(100 %)
0 diff
(100 %id)
ES314903 occipital scalp hair, skin .c 20 to 146 1 to 127       127/127
(100 %)
0 diff
(100 %id)
AW247391 lung, small cell carcinoma .c 32 to 176 102 to 246       145/246
(58 %)
6 diff
(97.6 %id)
EC445102 Prostate .c 62 to 165 8 to 110       103/110
(93 %)
6 diff
(94.6 %id)
AA833682   .c 109 to 532 423 to 1   tiling clone,   423/423
(100 %)
1 diff
(99.8 %id)
NM_178190.1   .d 1 to 598 4 to 601 exact RefSeq, AAA   601/601
(100 %)
0 diff
(100 %id)
BG036978 brain, hypothalamus .d 17 to 605 1 to 589 exact tiling clone,   589/626
(94 %)
6 diff
(99.1 %id)
DB497288 hypothalamus .d 25 to 518 1 to 494 exact     494/497
(99 %)
14 diff
(97.2 %id)
W45522 senescent fibroblast .d 58 to 605 1 to 566 G24X F25S G26A S27R D28I ...     566/573
(98 %)
22 diff
(96.2 %id)
AL583540 brain, fetal liver, Liver, neuroblastoma cells .d 66 to 600 1 to 535 exact fully sequenced,   535/535
(100 %)
0 diff
(100 %id)
BF800634 colon_ins .d 85 to 439 3 to 356       354/381
(92 %)
11 diff
(97.2 %id)
BF800763 colon_ins .d 85 to 439 3 to 354       352/379
(92 %)
13 diff
(96.6 %id)
BF800748 colon_ins .d 86 to 439 1 to 353       353/378
(93 %)
13 diff
(96.6 %id)
BE392981 endometrium, adenocarcinoma cell line, uterus .d 90 to 598 1 to 509   tiling clone, AAA   509/509
(100 %)
0 diff
(100 %id)
BF800632 colon_ins .d 95 to 439 18 to 361       344/386
(89 %)
8 diff
(98.0 %id)
BQ323683 colon_ins .d 103 to 439 21 to 359       339/384
(88 %)
8 diff
(98.0 %id)
AI146343 brain, glioblastoma (pooled) .d 106 to 600 498 to 4       495/498
(99 %)
0 diff
(100 %id)
BF800641 colon_ins .d 128 to 439 1 to 312       312/337
(92 %)
5 diff
(98.6 %id)
DB568341 hypothalamus .d 161 to 605 1 to 445   AAA Submitted on the opposite strand 445/445
(100 %)
5 diff
(98.9 %id)
AA772707 parathyroid gland, parathyroid tumor .d 166 to 600 440 to 7       434/441
(98 %)
2 diff
(99.6 %id)
BQ323684 colon_ins .d 230 to 439 1 to 211       211/236
(89 %)
5 diff
(97.9 %id)
AL531481 brain, fetal liver, Liver, neuroblastoma cells .d 230 to 542 346 to 34   fully sequenced,   313/319
(98 %)
0 diff
(100 %id)
DB030607 testis .e -10 to 516 2 to 528 exact capped   527/527
(100 %)
0 diff
(100 %id)
DB033765 testis .e -10 to 568 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
DA351663 substantia nigra .e 1 to 553 9 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
DA385915 thalamus .e 1 to 583 9 to 593 W11X L12A G13W V14R W15V ... capped   592/592
(100 %)
3 diff
(99.5 %id)
BG714388 brain, hypothalamus .e 1 to 633 7 to 636 exact     636/636
(100 %)
6 diff
(99.1 %id)
NM_178191.1   .e 1 to 1906 4 to 1909 exact RefSeq, AAA   1909/1909
(100 %)
0 diff
(100 %id)
BP235791 coronary artery .e 1 to 581 3 to 583 exact     583/583
(100 %)
1 diff
(99.9 %id)
DA964488 stomach .e 1 to 563 4 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DT220088 brain .e 1 to 576 2 to 577 exact     577/577
(100 %)
3 diff
(99.5 %id)
BP276205 Kidney .e 1 to 579 2 to 580 exact     580/580
(100 %)
2 diff
(99.7 %id)
DA050813   .e 1 to 545 2 to 546 exact capped   545/545
(100 %)
0 diff
(100 %id)
DA062618 cerebellum .e 1 to 569 2 to 570 exact capped   569/569
(100 %)
1 diff
(99.9 %id)
DA256786 caudate nucleus .e 1 to 527 2 to 528 exact capped   527/527
(100 %)
0 diff
(100 %id)
DA271677 caudate nucleus .e 1 to 574 2 to 575 exact capped   574/574
(100 %)
0 diff
(100 %id)
DA275469 corpus callosum .e 1 to 554 2 to 555 exact capped   554/554
(100 %)
0 diff
(100 %id)
DA358521 subthalamic nucleus .e 1 to 539 2 to 540 exact capped   539/539
(100 %)
0 diff
(100 %id)
DA378800 thalamus .e 1 to 626 2 to 627 exact tiling clone, capped   626/626
(100 %)
0 diff
(100 %id)
DA383967 thalamus .e 1 to 567 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA592281 lung .e 1 to 580 2 to 583 V14C W15V V17L R18* capped   582/582
(100 %)
3 diff
(99.5 %id)
DA967960 stomach .e 1 to 561 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
DB181333 liver, tumor tissue .e 1 to 566 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DB183219 liver, tumor tissue .e 1 to 574 2 to 575 exact capped   574/574
(100 %)
0 diff
(100 %id)
BP221288 colon .e 2 to 574 1 to 573 exact     573/573
(100 %)
5 diff
(99.2 %id)
DA590078 lung .e 3 to 556 2 to 555 exact capped   554/554
(100 %)
0 diff
(100 %id)
BG386592 adenocarcinoma cell line, colon .e 5 to 832 1 to 838 exact     838/903
(92 %)
22 diff
(97.6 %id)
TI_57198284   .e 6 to 753 70 to 815 exact     746/835
(89 %)
27 diff
(96.8 %id)
BM449487 leiomyosarcoma, uterus .e 7 to 778 18 to 798 exact     781/898
(86 %)
21 diff
(97.7 %id)
BI819891 pooled brain, lung, testis .e 11 to 753 1 to 741 exact     741/761
(97 %)
25 diff
(96.8 %id)
DB113517 thymus .e 14 to 618 2 to 606 exact capped   605/607
(99 %)
2 diff
(99.7 %id)
DA348087 substantia nigra .e 19 to 589 2 to 574 A8G R9A T10D W11V L12A ... capped   573/574
(99 %)
4 diff
(99.4 %id)
DT220423 brain .e 19 to 682 1 to 664 R41P     664/664
(100 %)
2 diff
(99.7 %id)
BP239249 Liver .e 19 to 632 1 to 614 W15G G16V     614/614
(100 %)
4 diff
(99.4 %id)
BP320004 placenta .e 19 to 599 1 to 581 exact     581/581
(100 %)
0 diff
(100 %id)
DA002625   .e 20 to 593 2 to 575 exact capped   574/574
(100 %)
1 diff
(99.9 %id)
DA063613 cerebellum .e 20 to 482 2 to 464 exact capped   463/463
(100 %)
0 diff
(100 %id)
DA078477 cerebellum .e 20 to 580 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
DA172161 amygdala .e 20 to 565 2 to 547 exact capped   546/546
(100 %)
0 diff
(100 %id)
DA273016 caudate nucleus .e 20 to 592 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DA372349 thalamus .e 20 to 581 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA383248 thalamus .e 20 to 545 2 to 527 exact capped   526/526
(100 %)
0 diff
(100 %id)
DA383376 thalamus .e 20 to 586 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA562510 heart .e 20 to 501 2 to 483 exact capped   482/482
(100 %)
0 diff
(100 %id)
DA589736 lung .e 20 to 487 2 to 469 exact capped   468/468
(100 %)
0 diff
(100 %id)
BM541762 leiomyosarcoma, uterus .e 20 to 947 1 to 936 exact     936/1040
(90 %)
19 diff
(98.2 %id)
DA924265 small intestine .e 20 to 592 2 to 574 M20I capped   573/573
(100 %)
1 diff
(99.9 %id)
DA945480 Spleen .e 20 to 581 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA985325 synovial membrane tissue from rheumatioidarthritis .e 20 to 558 2 to 540 exact capped   539/539
(100 %)
0 diff
(100 %id)
DA988725 synovial membrane tissue from rheumatioidarthritis .e 20 to 501 2 to 483 exact capped   482/482
(100 %)
0 diff
(100 %id)
DB121159 thymus .e 20 to 567 2 to 549 exact capped   548/548
(100 %)
0 diff
(100 %id)
DB181706 liver, tumor tissue .e 20 to 565 2 to 547 exact capped   546/546
(100 %)
0 diff
(100 %id)
DB182738 liver, tumor tissue .e 20 to 499 2 to 481 exact capped   480/480
(100 %)
0 diff
(100 %id)
DB185340 liver, tumor tissue .e 20 to 589 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DB186703 liver, tumor tissue .e 20 to 569 2 to 551 exact capped   550/550
(100 %)
0 diff
(100 %id)
DB244043 stomach, tumor tissue .e 20 to 592 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
BJ989627 hepatoblastoma .e 22 to 604 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
DA589207 lung .e 22 to 575 2 to 555 exact capped   554/554
(100 %)
0 diff
(100 %id)
BP328784 rectum .e 22 to 603 1 to 582 exact     582/582
(100 %)
2 diff
(99.7 %id)
DA936090 Spleen .e 22 to 545 2 to 525 exact capped   524/524
(100 %)
0 diff
(100 %id)
BP372676 umbilical cord .e 22 to 601 1 to 580 exact     580/580
(100 %)
0 diff
(100 %id)
DA057310 cerebellum .e 23 to 527 2 to 506 exact capped   505/505
(100 %)
0 diff
(100 %id)
DA421184 cervix .e 23 to 565 2 to 544 exact capped   543/543
(100 %)
0 diff
(100 %id)
DA674307   .e 23 to 545 2 to 524 exact capped   523/523
(100 %)
0 diff
(100 %id)
DA692303   .e 23 to 596 2 to 577 V14S W15V V17Q R18L T19G ... capped   576/576
(100 %)
3 diff
(99.5 %id)
DA920436 small intestine .e 23 to 577 2 to 556 exact capped   555/555
(100 %)
0 diff
(100 %id)
DB458307 testis .e 25 to 510 1 to 486 exact     486/486
(100 %)
1 diff
(99.8 %id)
BP261899 small intestine .e 25 to 607 1 to 583 exact     583/583
(100 %)
1 diff
(99.9 %id)
DA038078   .e 26 to 565 2 to 541 exact capped   540/540
(100 %)
0 diff
(100 %id)
DA143022 alzheimer cortex .e 26 to 601 2 to 577 exact capped   576/576
(100 %)
0 diff
(100 %id)
DA570708 whole embryo, mainly head .e 26 to 824 2 to 800 exact capped   799/799
(100 %)
2 diff
(99.8 %id)
DA282601 corpus callosum .e 28 to 601 2 to 576 R9X T10D W11V L12A G13W ... capped   575/575
(100 %)
1 diff
(99.9 %id)
DA016620 adrenal gland .e 30 to 584 2 to 556 exact capped   555/555
(100 %)
0 diff
(100 %id)
DA040726 bladder .e 30 to 601 2 to 577 A8G R9A T10G W11R L12G ... capped   576/576
(100 %)
4 diff
(99.4 %id)
DA055599 cerebellum .e 30 to 584 2 to 556 exact capped   555/555
(100 %)
0 diff
(100 %id)
DA063118 cerebellum .e 30 to 599 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA090934 cerebellum .e 30 to 599 2 to 572 V17X R18E T19D M20H Q21A ... capped   571/571
(100 %)
2 diff
(99.7 %id)
DA372112 thalamus .e 30 to 576 2 to 548 exact capped   547/547
(100 %)
0 diff
(100 %id)
BG686417 B-cells, primary B-cells from tonsils (cell line) .e 30 to 710 1 to 684 exact     684/684
(100 %)
8 diff
(98.9 %id)
DA713491   .e 30 to 556 2 to 528 exact capped   527/527
(100 %)
0 diff
(100 %id)
DA927157 small intestine .e 30 to 605 2 to 579 V14S W15V V17R R18E T19D ... capped   578/578
(100 %)
2 diff
(99.7 %id)
CR592071 fetal brain .e 31 to 1890 1 to 1860 exact     1860/1860
(100 %)
0 diff
(100 %id)
BI818359 pooled brain, lung, testis .e 31 to 838 1 to 813 exact     813/813
(100 %)
19 diff
(97.7 %id)
BI820646 pooled brain, lung, testis .e 31 to 774 1 to 746 A2Q     746/746
(100 %)
2 diff
(99.8 %id)
TI_57196390   .e 31 to 838 73 to 885 exact     813/885
(91 %)
24 diff
(97.3 %id)
TI_57197474   .e 31 to 774 33 to 778 A2Q     746/778
(95 %)
7 diff
(99.2 %id)
TI_44159405   .e 31 to 852 90 to 916 E31*     827/916
(90 %)
24 diff
(97.4 %id)
BM924260 pooled colon, kidney, stomach .e 32 to 1022 1 to 999 exact     999/1108
(90 %)
27 diff
(97.6 %id)
DA369745 subthalamic nucleus .e 33 to 617 2 to 586 exact capped   585/585
(100 %)
0 diff
(100 %id)
DA372316 thalamus .e 33 to 565 2 to 534 exact capped   533/533
(100 %)
0 diff
(100 %id)
DA842288 placenta .e 33 to 609 2 to 580 V17S R18E T19D M20H Q21A ... capped   579/579
(100 %)
2 diff
(99.7 %id)
BY797258 eye .e 34 to 603 1 to 570 exact     570/570
(100 %)
0 diff
(100 %id)
BE740691 adenocarcinoma cell line, ovary .e 34 to 898 1 to 857 exact     857/860
(99 %)
31 diff
(96.4 %id)
BF568722 epithelioid carcinoma cell line, Pancreas .e 37 to 774 1 to 732 exact     732/733
(99 %)
13 diff
(98.3 %id)
TI_154163306   .e 40 to 745 80 to 786 exact     707/716
(98 %)
13 diff
(98.2 %id)
DA257002 caudate nucleus .e 41 to 626 2 to 587 exact capped   586/586
(100 %)
0 diff
(100 %id)
DA352938 substantia nigra .e 41 to 608 2 to 571 V14C W15V V17L R18* capped   570/570
(100 %)
4 diff
(99.3 %id)
DA380909 thalamus .e 41 to 629 2 to 590 exact capped   589/589
(100 %)
0 diff
(100 %id)
BI544300 brain, hippocampus .e 46 to 893 1 to 845 M20T     845/845
(100 %)
22 diff
(97.4 %id)
BI598547 brain, hypothalamus .e 46 to 750 1 to 704 exact     704/705
(99 %)
9 diff
(98.8 %id)
TI_44000336   .e 47 to 893 82 to 925 M20T     844/925
(91 %)
25 diff
(97.3 %id)
TI_45212099   .e 47 to 750 84 to 786 exact     703/787
(89 %)
11 diff
(98.7 %id)
DB053090 testis .e 48 to 617 2 to 575 A8G R9A T10D W11V L12A ... capped   574/574
(100 %)
4 diff
(99.4 %id)
DA274929 corpus callosum .e 50 to 527 2 to 479 exact capped   478/478
(100 %)
0 diff
(100 %id)
AK000934 whole embryo, mainly head .e 52 to 1906 1 to 1855 exact available from FLJ,   1855/1855
(100 %)
1 diff
(100.0 %id)
DA349719 substantia nigra .e 52 to 635 2 to 585 exact capped   584/584
(100 %)
2 diff
(99.7 %id)
DB477850 hippocampus .e 52 to 537 1 to 486 R35Q     486/486
(100 %)
2 diff
(99.6 %id)
DB490493 hypothalamus .e 52 to 319 1 to 269 exact     269/269
(100 %)
5 diff
(98.2 %id)
DB504891 hypothalamus .e 52 to 537 1 to 486 exact     486/486
(100 %)
2 diff
(99.6 %id)
BP245882 Kidney .e 52 to 632 1 to 581 exact     581/581
(100 %)
2 diff
(99.7 %id)
BP352058   .e 52 to 633 1 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
BP376352 uterus .e 52 to 633 1 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
DA145678 amygdala .e 53 to 623 2 to 572 Q52X capped   571/571
(100 %)
0 diff
(100 %id)
DA538971 Kidney .e 53 to 641 2 to 591 R57L capped   590/590
(100 %)
3 diff
(99.5 %id)
DA539788 Kidney .e 53 to 620 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
AU117578 whole embryo, mainly head .e 53 to 834 2 to 780 exact capped   779/798
(97 %)
6 diff
(99.3 %id)
DA582760 lung .e 53 to 638 2 to 589 S39P I40P R41S E42G A43K ... capped   588/588
(100 %)
1 diff
(99.9 %id)
DA618750   .e 53 to 642 2 to 594 S39P I40P R41S E42G A43K ... capped   593/593
(100 %)
4 diff
(99.4 %id)
DA929478 small intestine .e 53 to 622 2 to 573 A37S S39P I40P R41S E42G ... capped   572/572
(100 %)
3 diff
(99.5 %id)
DB013210 esophageal, tumor tissue .e 53 to 605 2 to 554 exact capped   553/553
(100 %)
0 diff
(100 %id)
DB036184 testis .e 53 to 615 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
DB185501 liver, tumor tissue .e 53 to 616 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DB241875 stomach, tumor tissue .e 53 to 617 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DB264607 uterus .e 53 to 649 2 to 598 exact capped   597/597
(100 %)
1 diff
(99.9 %id)
DB261876 uterus .e 55 to 634 2 to 585 V14S W15V V17R R18E T19D ... capped   584/584
(100 %)
5 diff
(99.2 %id)
CA947201 Pancreas, Purified pancreatic islet .e 58 to 564 1 to 507 exact     507/507
(100 %)
6 diff
(98.9 %id)
AL534024 brain, fetal brain .e 60 to 700 1 to 641 exact     641/641
(100 %)
0 diff
(100 %id)
AL050386 brain .e 62 to 1906 4 to 1848 exact available from DKFZ, AAA   1845/1845
(100 %)
0 diff
(100 %id)
DA079906 cerebellum .e 62 to 624 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
CR597880 HeLa cells Cot 25-normalized .e 62 to 1904 1 to 1843 exact     1843/1843
(100 %)
0 diff
(100 %id)
BX341973   .e 62 to 1053 1 to 993 exact     993/993
(100 %)
2 diff
(99.8 %id)
TI_57232329   .e 62 to 820 27 to 794 exact     768/822
(93 %)
29 diff
(96.5 %id)
DA631041 Kidney .e 62 to 629 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA705347   .e 62 to 521 2 to 461 exact capped   460/460
(100 %)
0 diff
(100 %id)
DB185325 liver, tumor tissue .e 62 to 576 2 to 516 exact capped   515/515
(100 %)
0 diff
(100 %id)
DA174613 amygdala .e 68 to 583 2 to 517 exact capped   516/516
(100 %)
0 diff
(100 %id)
BP269627 thyroid .e 69 to 647 1 to 579 exact     579/579
(100 %)
0 diff
(100 %id)
DA071397 cerebellum .e 70 to 643 2 to 575 exact capped   574/574
(100 %)
0 diff
(100 %id)
CN346377 embryonic stem cells, DMSO-treated H9 cellline .e 70 to 737 1 to 668 exact     668/668
(100 %)
5 diff
(99.3 %id)
BF975570 B-cells, primary B-cells from tonsils (cell line) .e 70 to 877 1 to 809 exact     809/1002
(80 %)
29 diff
(97.2 %id)
BG686825 B-cells, primary B-cells from tonsils (cell line) .e 70 to 1019 1 to 950 exact     950/969
(98 %)
33 diff
(96.6 %id)
BG685746 B-cells, primary B-cells from tonsils (cell line) .e 70 to 844 1 to 778 exact     778/778
(100 %)
11 diff
(98.6 %id)
BG685663 B-cells, primary B-cells from tonsils (cell line) .e 70 to 857 1 to 787 exact     787/792
(99 %)
9 diff
(98.9 %id)
BG686243 B-cells, primary B-cells from tonsils (cell line) .e 70 to 1015 1 to 959 exact     959/963
(99 %)
31 diff
(96.8 %id)
BG686244 B-cells, primary B-cells from tonsils (cell line) .e 70 to 1072 1 to 989 exact     989/989
(100 %)
43 diff
(95.7 %id)
BG759201 B-cells, primary B-cells from tonsils (cell line) .e 70 to 789 1 to 721 L6V A7G A8G R9A T10D ...     721/1148
(62 %)
16 diff
(98.7 %id)
BG759563 B-cells, primary B-cells from tonsils (cell line) .e 70 to 669 1 to 600 exact     600/600
(100 %)
1 diff
(99.9 %id)
BG756352 B-cells, primary B-cells from tonsils (cell line) .e 70 to 1017 1 to 948 exact     948/952
(99 %)
24 diff
(97.5 %id)
BI756964 brain .e 70 to 947 1 to 876 R50E E51R Q52A A53G E54*     876/876
(100 %)
15 diff
(98.3 %id)
TI_57220218   .e 70 to 947 36 to 911 R50E E51R Q52A A53G E54*     876/911
(96 %)
21 diff
(97.7 %id)
BC001867 Lung, small cell carcinoma .e 71 to 1906 93 to 1928 exact tiling clone, available from MGC, AAA   1836/1928
(95 %)
6 diff
(99.7 %id)
BE264003 lung, small cell carcinoma .e 71 to 420 74 to 423 exact available from MGC,   350/423
(82 %)
6 diff
(98.6 %id)
BQ056012 lymph, lymphoma, cell line .e 73 to 948 1 to 882 exact     882/1003
(87 %)
14 diff
(98.7 %id)
BU182674 melanotic melanoma, skin .e 73 to 921 21 to 872 exact     852/872
(97 %)
16 diff
(98.2 %id)
TI_57152578   .e 73 to 644 54 to 625 M20S Q21A A22S R23P G24R ...     572/625
(91 %)
7 diff
(98.9 %id)
CV804288 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .e 74 to 839 1 to 766 exact     766/767
(99 %)
6 diff
(99.3 %id)
BP244551 Kidney .e 75 to 661 1 to 587 exact     587/587
(100 %)
2 diff
(99.7 %id)
CX751824 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .e 75 to 834 1 to 750 exact     750/875
(85 %)
18 diff
(98.0 %id)
CR621184 fetal brain .e 77 to 1853 1 to 1777 exact     1777/1777
(100 %)
0 diff
(100 %id)
BX440979 brain, fetal brain .e 77 to 1110 1 to 1036 Q29X E31X V33I D34B R50K ... fully sequenced,   1036/1036
(100 %)
44 diff
(95.8 %id)
DA069310 cerebellum .e 79 to 629 2 to 552 exact capped   551/551
(100 %)
0 diff
(100 %id)
CV575867 cornea, eye .e 82 to 695 1 to 614 exact     614/614
(100 %)
0 diff
(100 %id)
BC017562 Ovary, adenocarcinoma .e 86 to 1906 1 to 1821   available from MGC, AAA   1821/1821
(100 %)
0 diff
(100 %id)
BE747272 adenocarcinoma cell line, ovary .e 86 to 857 1 to 770       770/772
(99 %)
5 diff
(99.4 %id)
BE791051 lung, small cell carcinoma .e 91 to 897 1 to 798       798/926
(86 %)
15 diff
(98.4 %id)
BE778582 eye, retinoblastoma .e 92 to 812 1 to 723       723/1020
(70 %)
29 diff
(97.2 %id)
CX759862 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .e 93 to 827 1 to 729       729/824
(88 %)
12 diff
(98.6 %id)
CN346378 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 95 to 847 1 to 753       753/753
(100 %)
5 diff
(99.4 %id)
BG326006 Kidney, renal cell adenocarcinoma .e 133 to 885 1 to 755       755/1092
(69 %)
16 diff
(98.6 %id)
BG468360 adenocarcinoma cell line, colon .e 133 to 1021 1 to 876       876/912
(96 %)
30 diff
(96.8 %id)
BU948912 Pancreas, Purified pancreatic islet .e 234 to 647 1 to 414       414/414
(100 %)
0 diff
(100 %id)
BX399309 Placenta Cot 25-normalized .e 811 to 1895 1077 to 1       1077/1077
(100 %)
20 diff
(98.2 %id)
CB045961 2 pooled tumors (clear cell type), Kidney .e 940 to 1548 17 to 625   fully sequenced,   609/625
(97 %)
6 diff
(99.1 %id)
BM559728 brain, medulla .e 997 to 1896 14 to 918       905/1017
(88 %)
9 diff
(99.2 %id)
TI_149291410   .e 1006 to 1906 968 to 76   AAA   893/951
(93 %)
18 diff
(98.2 %id)
BF982819 duodenal adenocarcinoma, cell line, small intestine .e 1008 to 1730 1 to 718       718/944
(76 %)
13 diff
(98.7 %id)
BG340290 leiomyosarcoma cell line, uterus .e 1023 to 1812 1 to 780       780/928
(84 %)
19 diff
(98.0 %id)
BX393248   .e 1073 to 1904 836 to 1       836/868
(96 %)
19 diff
(97.9 %id)
BX434910 brain, fetal brain .e 1080 to 1853 779 to 1   fully sequenced,   779/779
(100 %)
50 diff
(93.6 %id)
BI223511 cervical carcinoma cell line, cervix .e 1083 to 1713 1 to 631       631/632
(99 %)
7 diff
(98.9 %id)
TI_149300919   .e 1129 to 1906 848 to 75   AAA   774/980
(78 %)
8 diff
(99.2 %id)
BQ007789 Chondrosarcoma, Left Pelvis .e 1174 to 1906 751 to 19   AAA   733/733
(100 %)
1 diff
(99.9 %id)
AL534023 brain, fetal brain .e 1192 to 1866 675 to 1       675/675
(100 %)
2 diff
(99.8 %id)
BG291553 bladder, transitional cell papilloma, cell line .e 1222 to 1894 1 to 673       673/708
(95 %)
12 diff
(98.4 %id)
BM974031 lung .e 1224 to 1906 701 to 19   AAA   683/683
(100 %)
0 diff
(100 %id)
BQ576194 Chondrosarcoma Grade II, Left Pelvis .e 1224 to 1906 701 to 19   AAA   683/683
(100 %)
2 diff
(99.8 %id)
BM976899 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1234 to 1906 691 to 19   AAA   673/673
(100 %)
0 diff
(100 %id)
TI_154169556   .e 1330 to 1908 670 to 96     Submitted on the opposite strand 575/932
(61 %)
0 diff
(100 %id)
BM685404 eye, RPE and Choroid .e 1336 to 1906 8 to 579   AAA   572/579
(98 %)
6 diff
(99.0 %id)
BQ332522 lung_tumor .e 1339 to 1784 452 to 1       452/452
(100 %)
16 diff
(96.5 %id)
AU145608 whole embryo, mainly head .e 1347 to 1906 555 to 1       555/555
(100 %)
7 diff
(98.8 %id)
BU948661 Pancreas, Purified pancreatic islet .e 1365 to 1907 543 to 1       543/543
(100 %)
1 diff
(99.9 %id)
AU144372 whole embryo, mainly head .e 1406 to 1906 499 to 1       499/541
(92 %)
7 diff
(98.8 %id)
TI_149294332   .e 1410 to 1906 560 to 64   AAA   497/709
(70 %)
3 diff
(99.6 %id)
DB576152 hypothalamus .e 1416 to 1904 1 to 489     Submitted on the opposite strand 489/490
(99 %)
1 diff
(99.8 %id)
CF139292 CNCAP(3)T-225 cell line, Prostate .e 1418 to 1908 504 to 14     Submitted on the opposite strand 491/506
(97 %)
0 diff
(100 %id)
BQ331663 lung_tumor .e 1436 to 1827 395 to 6       390/395
(98 %)
0 diff
(100 %id)
AW268818 pooled .e 1443 to 1905 463 to 1       463/463
(100 %)
0 diff
(100 %id)
DB523803 testis .e 1456 to 1904 1 to 449     Submitted on the opposite strand 449/451
(99 %)
1 diff
(99.8 %id)
DB560840 hypothalamus .e 1459 to 1904 1 to 447     Submitted on the opposite strand 447/448
(99 %)
2 diff
(99.6 %id)
DB546457 hippocampus .e 1465 to 1906 1 to 442     Submitted on the opposite strand 442/442
(100 %)
0 diff
(100 %id)
AW249985 lung, small cell carcinoma .e 1472 to 1906 445 to 11   AAA   435/435
(100 %)
0 diff
(100 %id)
CA946910 Pancreas, Purified pancreatic islet .e 1473 to 1905 433 to 1       433/433
(100 %)
1 diff
(99.8 %id)
C05832   .e 1495 to 1906 424 to 11       414/425
(97 %)
0 diff
(100 %id)
EC546496 Prostate .e 1515 to 1622 1 to 108       108/108
(100 %)
0 diff
(100 %id)
CB045960 2 pooled tumors (clear cell type), Kidney .e 1518 to 1906 432 to 44   fully sequenced, AAA   389/389
(100 %)
4 diff
(99.0 %id)
BM691379 eye, RPE and Choroid .e 1532 to 1906 1 to 375   AAA   375/375
(100 %)
7 diff
(98.2 %id)
BE937044 stomach_normal .e 1565 to 1678 130 to 17       114/133
(85 %)
0 diff
(100 %id)
CN478687 Human Lung Epithelial cells, lung .e 1596 to 1906 16 to 326   AAA Submitted on the opposite strand 311/326
(95 %)
6 diff
(98.2 %id)
DA930126 small intestine .f-u 1 to 584 2 to 585   tiling clone, capped   584/584
(100 %)
0 diff
(100 %id)
DA966199 stomach .f-u 20 to 583 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB024156 testis .f-u 20 to 571 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DA086515 cerebellum .f-u 30 to 594 2 to 568   capped   567/567
(100 %)
4 diff
(99.3 %id)
DA016939 adrenal gland .f-u 33 to 585 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
TI_44351196   .f-u 53 to 841 132 to 931 K22N P23R P25H P26R A27R ...     800/1255
(63 %)
6 diff
(99.6 %id)
DB128697 thymus .f-u 53 to 609 2 to 558   tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
BI562694 testis .f-u 56 to 923 1 to 884 K22N P23R P25H P26R A27R ... tiling clone,   884/1121
(78 %)
70 diff
(93.8 %id)
W86492 liver and spleen Gene ATPIF1, variant not shown       fully sequenced, AAA Suspected internal deletion, this clone was ignored    
W86637 liver and spleen Gene ATPIF1, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
BE265799 lung, small cell carcinoma Gene ATPIF1, variant not shown         Suspected internal deletion, this clone was ignored    
BI222601 cervical carcinoma cell line, cervix Gene ATPIF1, variant not shown              
BI458221 brain, hypothalamus Gene ATPIF1, variant not shown         This clone was ignored    
TI_154005871   Gene ATPIF1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI