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Gene KIAA0494andATPAF1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
592 representative clones for gene KIAA0494andATPAF1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA737324   .a -8 to 756 2 to 765   tiling clone, capped   764/764
(100 %)
6 diff
(99.3 %id)
AB007963 brain .a 50 to 5814 1 to 5766 exact tiling clone, available from KIAA,   5766/5766
(100 %)
8 diff
(99.9 %id)
NM_014774.2   .a 50 to 5814 1 to 5765 exact RefSeq, AAA   5765/5765
(100 %)
0 diff
(100 %id)
BC002525 Placenta, choriocarcinoma .a 905 to 2758 1 to 1854 exact available from MGC, AAA   1854/1854
(100 %)
0 diff
(100 %id)
BC018842.
matches multiple genes
choriocarcinoma, placenta, Placenta, choriocarcinoma .a 905 to 2758 1 to 1854   available from MGC, AAA also hits gene OSGEP 1854/1854
(100 %)
0 diff
(100 %id)
BI827858 brain, medulla .a 942 to 1837 1 to 898       898/900
(99 %)
12 diff
(98.7 %id)
TI_57171902   .a 942 to 1837 36 to 933       898/935
(96 %)
17 diff
(98.2 %id)
TI_1948085735   .a 1027 to 1768 141 to 883   fully sequenced,   743/883
(84 %)
7 diff
(99.3 %id)
TI_1948085881   .a 1027 to 1822 144 to 938       795/1361
(58 %)
12 diff
(99.2 %id)
TI_1948086048   .a 1027 to 1822 133 to 928   fully sequenced,   796/928
(85 %)
8 diff
(99.2 %id)
TI_1948086202   .a 1027 to 1789 134 to 903   fully sequenced,   768/901
(85 %)
20 diff
(97.8 %id)
BG033669 breast, mammary adenocarcinoma, cell line .a 1195 to 1956 15 to 780       766/1127
(67 %)
32 diff
(97.2 %id)
BQ422943 embryonal carcinoma, cell line, testis .a 1420 to 2241 82 to 903       821/903
(90 %)
15 diff
(98.4 %id)
BQ889819 dorsal root ganglia .a 1433 to 2290 1 to 862       862/862
(100 %)
6 diff
(99.4 %id)
AK001487   .a 1551 to 4405 1 to 2856   available from FLJ,   2856/2856
(100 %)
6 diff
(99.8 %id)
AL120413 amygdala .a 1605 to 2109 1 to 505       505/506
(99 %)
0 diff
(100 %id)
AV709766 adrenal gland .a 1639 to 2037 1 to 399       399/399
(100 %)
0 diff
(100 %id)
AV725622 hypothalamus .a 1723 to 2082 1 to 360       360/360
(100 %)
0 diff
(100 %id)
TI_1948085736   .a 1738 to 2513 901 to 126   fully sequenced,   776/901
(86 %)
2 diff
(99.8 %id)
TI_1948086203   .a 1759 to 2513 893 to 125   fully sequenced,   769/893
(86 %)
18 diff
(98.0 %id)
TI_1948086049   .a 1791 to 2513 849 to 126   fully sequenced,   724/849
(85 %)
3 diff
(99.7 %id)
TI_1948085882   .a 1820 to 2529 817 to 108       710/1245
(57 %)
10 diff
(99.2 %id)
AU132961   .a 1833 to 2785 2 to 949   capped   948/949
(99 %)
20 diff
(97.9 %id)
BU175611 embryonal carcinoma, cell line, testis .a 1895 to 2711 1 to 821       821/821
(100 %)
7 diff
(99.2 %id)
TI_149315518   .a 1935 to 2760 902 to 83   AAA   820/966
(84 %)
10 diff
(99.0 %id)
DA128076 cerebellum .a 1972 to 2548 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB213230 trachea .a 1973 to 2520 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB227024 trachea .a 1979 to 2546 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
CV807254 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 2013 to 2680 713 to 44   AAA Submitted on the opposite strand 670/854
(78 %)
15 diff
(98.3 %id)
BQ008634 Chondrosarcoma, Left Pubic Bone .a 2056 to 2760 721 to 17   AAA   705/705
(100 %)
0 diff
(100 %id)
TI_153989130   .a 2129 to 2758 720 to 91   AAA   630/631
(99 %)
15 diff
(97.7 %id)
BG236306 blood, lymphocyte .a 2134 to 2685 556 to 5       552/556
(99 %)
1 diff
(99.9 %id)
DA366901 subthalamic nucleus .a 2144 to 2697 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
AI804463 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2146 to 2760 615 to 1       615/615
(100 %)
1 diff
(99.9 %id)
DB215543 trachea .a 2174 to 2704 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
H69110 liver and spleen .a 2213 to 2554 2 to 343       342/343
(99 %)
0 diff
(100 %id)
DB509919 testis .a 2215 to 2683 1 to 470     Submitted on the opposite strand 470/470
(100 %)
3 diff
(99.4 %id)
BM785012 stomach .a 2221 to 2624 1 to 404       404/404
(100 %)
0 diff
(100 %id)
DB523852 testis .a 2227 to 2680 1 to 454     Submitted on the opposite strand 454/454
(100 %)
0 diff
(100 %id)
AL599302   .a 2231 to 2730 1 to 500       500/500
(100 %)
0 diff
(100 %id)
BQ582027 insulinoma, Pancreas .a 2234 to 2758 1 to 525   fully sequenced, AAA   525/525
(100 %)
5 diff
(99.1 %id)
DB517623 testis .a 2236 to 2680 1 to 445     Submitted on the opposite strand 445/445
(100 %)
0 diff
(100 %id)
DB523763 testis .a 2236 to 2683 1 to 448     Submitted on the opposite strand 448/448
(100 %)
0 diff
(100 %id)
AI148454   .a 2238 to 2676 450 to 12   AAA   439/439
(100 %)
0 diff
(100 %id)
DB219508 trachea .a 2260 to 2831 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
AI220222 pooled .a 2263 to 2685 424 to 2       423/424
(99 %)
0 diff
(100 %id)
BG163445 hypernephroma, cell line, Kidney .a 2271 to 2680 1 to 410   AAA   410/410
(100 %)
0 diff
(100 %id)
DB369912   .a 2274 to 2758 485 to 1       485/489
(99 %)
2 diff
(99.6 %id)
CN308007 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2292 to 2676 1 to 385   AAA   385/385
(100 %)
3 diff
(99.3 %id)
AA287753 germinal center B cell .a 2296 to 2681 386 to 1     Submitted on the opposite strand 386/386
(100 %)
0 diff
(100 %id)
DB081732 testis .a 2305 to 2838 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
BQ581691 insulinoma, Pancreas .a 2308 to 2773 466 to 1   fully sequenced,   466/466
(100 %)
3 diff
(99.4 %id)
AI024654   .a 2311 to 2679 369 to 1       369/369
(100 %)
0 diff
(100 %id)
AA431370.
matches multiple genes
  .a 2327 to 2663 1 to 337     also hits gene spoyfeyby 337/337
(100 %)
0 diff
(100 %id)
DB285212 uterus .a 2329 to 2873 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
TI_154160673   .a 2379 to 3076 82 to 773       692/707
(97 %)
17 diff
(97.6 %id)
CN308008 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2440 to 2947 1 to 508       508/508
(100 %)
0 diff
(100 %id)
BU603286 mixed (pool of 40 RNAs) .a 2443 to 3278 1 to 836       836/836
(100 %)
19 diff
(97.8 %id)
AA680159 liver and spleen .a 2445 to 2760 316 to 1       316/316
(100 %)
0 diff
(100 %id)
AA476304 ovarian tumor, ovary .a 2534 to 2722 1 to 189     Submitted on the opposite strand 189/189
(100 %)
0 diff
(100 %id)
AL705944 human skeletal muscle .a 2588 to 3365 1 to 780       780/780
(100 %)
4 diff
(99.5 %id)
CD656131 Embryonic Stem cells .a 2601 to 3386 5 to 788       784/791
(99 %)
17 diff
(97.9 %id)
AA013465 eye, retina .a 2604 to 2762 159 to 1     Submitted on the opposite strand 159/159
(100 %)
1 diff
(99.4 %id)
TI_154168908   .a 2610 to 3114 80 to 584       505/505
(100 %)
2 diff
(99.7 %id)
AI123770 pooled .a 2616 to 3064 449 to 1       449/449
(100 %)
0 diff
(100 %id)
DA532321 brain .a 2634 to 3162 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
AA478157 ovarian tumor, ovary .a 2640 to 3178 1 to 538       538/538
(100 %)
6 diff
(98.9 %id)
DA416859 thalamus .a 2754 to 3258 2 to 506   capped   505/505
(100 %)
0 diff
(100 %id)
BQ439649 melanotic melanoma, skin .a 2762 to 3620 1 to 867       867/874
(99 %)
16 diff
(98.2 %id)
BF434376 fibrotheoma, ovary .a 2784 to 3268 1 to 484     Submitted on the opposite strand 484/484
(100 %)
4 diff
(99.2 %id)
DA161189 amygdala .a 2786 to 3355 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BQ878658 dorsal root ganglia .a 2815 to 3705 1 to 907       907/911
(99 %)
29 diff
(96.9 %id)
AU138785 placenta .a 2816 to 3315 2 to 501   capped   500/500
(100 %)
3 diff
(99.4 %id)
AA133659 uterus .a 2872 to 3349 1 to 483       483/483
(100 %)
9 diff
(98.2 %id)
BU193783 melanotic melanoma, skin .a 2889 to 3760 1 to 883       883/892
(98 %)
29 diff
(96.8 %id)
W90305 liver and spleen .a 2890 to 3333 1 to 445       445/445
(100 %)
3 diff
(99.4 %id)
BM721209 eye, fetal eye .a 2941 to 3634 1 to 694       694/694
(100 %)
0 diff
(100 %id)
FN129165 breast carcinoma .a 2960 to 3060 1 to 101       101/101
(100 %)
0 diff
(100 %id)
CD626130   .a 2985 to 3820 839 to 8       832/839
(99 %)
0 diff
(100 %id)
AA306403   .a 3003 to 3489 1 to 487       487/487
(100 %)
0 diff
(100 %id)
CN308016 embryonic stem cells, cell lines H1, H7, andH9 .a 3006 to 3708 1 to 703   tiling clone,   703/703
(100 %)
1 diff
(99.9 %id)
DA592037 lung .a 3041 to 3610 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
CD626127   .a 3106 to 3745 1 to 640       640/640
(100 %)
0 diff
(100 %id)
CD626128   .a 3106 to 3820 722 to 8       715/722
(99 %)
0 diff
(100 %id)
CB243202 Human Lung Epithelial cells, lung .a 3167 to 3926 777 to 19   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 759/759
(100 %)
3 diff
(99.7 %id)
DA884259   .a 3219 to 3790 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BE222263 carcinoid, lung .a 3287 to 3697 1 to 411     Submitted on the opposite strand 411/411
(100 %)
0 diff
(100 %id)
DB126362 thymus .a 3287 to 3859 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
AI089377 uterus .a 3290 to 3763 1 to 474     Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
DA072032 cerebellum .a 3302 to 3879 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
AA826530 carcinoid, lung .a 3305 to 3683 1 to 379     Submitted on the opposite strand 379/379
(100 %)
0 diff
(100 %id)
AI266054 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3305 to 3682 1 to 378     Submitted on the opposite strand 378/378
(100 %)
0 diff
(100 %id)
BQ718690 sympathetic trunk .a 3320 to 4111 1 to 798       798/885
(90 %)
11 diff
(98.8 %id)
DA394540 thalamus .a 3358 to 3888 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
AA676790 liver and spleen .a 3379 to 3926 548 to 1       548/548
(100 %)
0 diff
(100 %id)
BM454722 embryonal carcinoma, cell line, testis .a 3401 to 4389 1 to 997       997/998
(99 %)
21 diff
(97.9 %id)
BQ026086 placenta .a 3417 to 3926 527 to 18   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 510/510
(100 %)
0 diff
(100 %id)
AA255740 germinal center B cell .a 3437 to 3789 1 to 353       353/353
(100 %)
0 diff
(100 %id)
BF752660 breast_normal .a 3474 to 4027 558 to 6     Submitted on the opposite strand 553/558
(99 %)
0 diff
(100 %id)
AA133660 uterus .a 3476 to 3926 453 to 1       453/453
(100 %)
2 diff
(99.6 %id)
CN308015 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3477 to 4103 1 to 627       627/627
(100 %)
0 diff
(100 %id)
AA418887 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3477 to 3908 1 to 431   fully sequenced,   431/431
(100 %)
1 diff
(99.8 %id)
BQ187238 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3512 to 3880 1 to 370   fully sequenced, Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 370/370
(100 %)
1 diff
(99.8 %id)
TI_151734206   .a 3512 to 4231 797 to 75   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 723/898
(80 %)
9 diff
(99.0 %id)
AA932329 carcinoid, lung .a 3527 to 3925 399 to 1       399/399
(100 %)
0 diff
(100 %id)
W90615 liver and spleen .a 3530 to 3926 400 to 1       400/400
(100 %)
3 diff
(99.3 %id)
AI191834 heart .a 3595 to 3926 332 to 1       332/332
(100 %)
0 diff
(100 %id)
AA361382   .a 3632 to 3804 1 to 173       173/173
(100 %)
0 diff
(100 %id)
AA001638 liver and spleen .a 3689 to 3926 238 to 1       238/238
(100 %)
0 diff
(100 %id)
AI351376 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3695 to 4177 483 to 1   tiling clone,   483/483
(100 %)
0 diff
(100 %id)
AA418888 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3728 to 3926 199 to 1   fully sequenced,   199/199
(100 %)
0 diff
(100 %id)
BQ959934 leiomyosarcoma, uterus .a 3801 to 4725 1 to 935       935/938
(99 %)
22 diff
(97.7 %id)
BP205046 coronary artery .a 3823 to 4398 1 to 576       576/576
(100 %)
0 diff
(100 %id)
CK300569 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3850 to 4231 404 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 386/386
(100 %)
6 diff
(98.5 %id)
GD139923   .a 3851 to 3935 1 to 85       85/91
(93 %)
3 diff
(96.8 %id)
AU135750 placenta .a 3880 to 4608 2 to 731   capped   730/733
(99 %)
8 diff
(99.0 %id)
BQ897190 dorsal root ganglia .a 3907 to 4748 20 to 867       848/871
(97 %)
10 diff
(98.9 %id)
AA478158 ovarian tumor, ovary .a 3911 to 4418 513 to 5       509/513
(99 %)
0 diff
(100 %id)
BM987014 mixed .a 3920 to 4405 504 to 19   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 486/486
(100 %)
0 diff
(100 %id)
BF440035 brain, glioblastoma (pooled) .a 3934 to 4411 478 to 1       478/478
(100 %)
0 diff
(100 %id)
AW166981 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 3947 to 4407 461 to 1       461/461
(100 %)
0 diff
(100 %id)
AA262028 germinal center B cell .a 3975 to 4405 432 to 1       432/432
(100 %)
1 diff
(99.8 %id)
BQ217904 embryonal carcinoma, cell line, testis .a 4017 to 4832 1 to 829       829/891
(93 %)
21 diff
(97.7 %id)
BP207418 coronary artery .a 4102 to 4683 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BG546976 lung .a 4126 to 4901 1 to 781       781/864
(90 %)
20 diff
(97.7 %id)
H15510 whole brain .a 4204 to 4611 1 to 414       414/414
(100 %)
9 diff
(97.9 %id)
BP206370 coronary artery .a 4208 to 4789 1 to 582       582/582
(100 %)
0 diff
(100 %id)
EH337650   .a 4261 to 4340 1 to 80       80/80
(100 %)
0 diff
(100 %id)
BM925136 pooled lung and spleen .a 4301 to 5184 1 to 885       885/1059
(83 %)
21 diff
(98.1 %id)
CN308013 embryonic stem cells, cell lines H1, H7, andH9 .a 4342 to 5008 671 to 5     Submitted on the opposite strand 667/671
(99 %)
0 diff
(100 %id)
DA366416 subthalamic nucleus .a 4406 to 4958 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA568701 whole embryo, mainly head .a 4432 to 5285 2 to 852   fully sequenced, capped   851/851
(100 %)
6 diff
(99.3 %id)
CU444676 epidermis .a 4450 to 5163 1 to 715       715/715
(100 %)
6 diff
(99.2 %id)
AA404309 ovarian tumor, ovary .a 4478 to 5055 1 to 578       578/578
(100 %)
2 diff
(99.7 %id)
BG433503 Kidney .a 4601 to 5396 1 to 784       784/830
(94 %)
25 diff
(97.0 %id)
BQ942473 large cell carcinoma, lung .a 4669 to 5456 1 to 796       796/845
(94 %)
11 diff
(98.7 %id)
BU192369 embryonal carcinoma, cell line, testis .a 4672 to 5517 1 to 849       849/849
(100 %)
4 diff
(99.6 %id)
TI_149298313   .a 4818 to 5814 1072 to 83   AAA   990/991
(99 %)
3 diff
(99.7 %id)
TI_149297338   .a 4857 to 5814 1022 to 81   AAA   942/967
(97 %)
3 diff
(99.7 %id)
TI_149303718   .a 4885 to 5814 1019 to 103   AAA   917/990
(92 %)
19 diff
(98.1 %id)
BG576309 breast, mammary adenocarcinoma, cell line .a 4896 to 5690 15 to 809   tiling clone,   795/809
(98 %)
6 diff
(99.3 %id)
CB177526 Pancreas, Purified pancreatic islet .a 4896 to 5331 10 to 445   fully sequenced,   436/445
(97 %)
9 diff
(98.0 %id)
BM915374 amelanotic melanoma, cell line, skin .a 4980 to 5814 1 to 836       836/843
(99 %)
13 diff
(98.5 %id)
TI_149296065   .a 5016 to 5814 878 to 84   AAA   795/966
(82 %)
3 diff
(99.7 %id)
TI_149315846   .a 5017 to 5814 872 to 76   AAA   797/989
(80 %)
9 diff
(99.1 %id)
TI_154120307   .a 5017 to 5814 874 to 80   AAA   795/975
(81 %)
6 diff
(99.4 %id)
TI_154130997   .a 5020 to 5814 876 to 87   AAA   790/973
(81 %)
25 diff
(97.5 %id)
TI_154126034   .a 5023 to 5814 871 to 94   AAA   778/934
(83 %)
22 diff
(97.7 %id)
N76309 liver and spleen .a 5028 to 5467 1 to 439   fully sequenced,   439/439
(100 %)
1 diff
(99.8 %id)
AA281109 germinal center B cell .a 5030 to 5452 1 to 425   fully sequenced,   425/425
(100 %)
2 diff
(99.6 %id)
AA281595 germinal center B cell .a 5030 to 5297 1 to 268       268/268
(100 %)
0 diff
(100 %id)
BM679627 eye, fetal eye .a 5091 to 5814 743 to 19   AAA   725/725
(100 %)
2 diff
(99.8 %id)
CA420162 Bone, Human Chondrosarcoma Cell Line .a 5097 to 5814 1 to 718   AAA Submitted on the opposite strand 718/718
(100 %)
5 diff
(99.4 %id)
BU622933 cell lines, Chondrosarcoma .a 5099 to 5814 734 to 19   AAA   716/720
(99 %)
4 diff
(99.5 %id)
BU684107 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 5118 to 5814 715 to 19   AAA   697/697
(100 %)
0 diff
(100 %id)
CB306607 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 5118 to 5814 715 to 19   AAA   697/697
(100 %)
0 diff
(100 %id)
BQ575708 Chondrosarcoma Grade II, Left Pelvis .a 5121 to 5814 712 to 19   AAA   694/694
(100 %)
0 diff
(100 %id)
CB850624 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 5122 to 5814 711 to 19   AAA   693/693
(100 %)
0 diff
(100 %id)
W68542 heart .a 5123 to 5447 1 to 326     Submitted on the opposite strand 326/326
(100 %)
1 diff
(99.7 %id)
TI_149277722   .a 5127 to 5810 773 to 91   AAA   683/683
(100 %)
4 diff
(99.5 %id)
BM981674 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 5132 to 5814 701 to 19   AAA   683/683
(100 %)
0 diff
(100 %id)
CA415560 Chondrosarcoma Grade II, Left Pelvis .a 5132 to 5814 701 to 19   AAA   683/683
(100 %)
0 diff
(100 %id)
W68541 heart .a 5138 to 5520 382 to 1     Submitted on the opposite strand 382/382
(100 %)
1 diff
(99.8 %id)
BM983071 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 5159 to 5814 674 to 19   AAA   656/656
(100 %)
0 diff
(100 %id)
AA044039 uterus .a 5173 to 5532 1 to 362   fully sequenced,   362/362
(100 %)
2 diff
(99.5 %id)
AA441970   .a 5173 to 5616 1 to 444   fully sequenced,   444/444
(100 %)
0 diff
(100 %id)
BU677903 lung .a 5201 to 5810 628 to 19   AAA   610/610
(100 %)
0 diff
(100 %id)
CF127305 Chondrosarcoma Lung Metastasis cell lines, lung .a 5209 to 5814 1 to 606   AAA   606/606
(100 %)
0 diff
(100 %id)
TI_154190852   .a 5209 to 5814 51 to 656   AAA   606/606
(100 %)
0 diff
(100 %id)
CA416295 Chondrosarcoma Cell line .a 5217 to 5814 616 to 19   AAA   598/598
(100 %)
0 diff
(100 %id)
CA418004 Bone, Human Chondrosarcoma Cell Line .a 5237 to 5814 596 to 19   AAA   578/578
(100 %)
0 diff
(100 %id)
CA435345 lung, Metastatic Chondrosarcoma .a 5249 to 5814 584 to 19   AAA   566/566
(100 %)
0 diff
(100 %id)
DB355246 whole embryo, mainly head .a 5255 to 5814 559 to 1   fully sequenced,   559/559
(100 %)
7 diff
(98.8 %id)
AA404673 ovarian tumor, ovary .a 5272 to 5814 542 to 1       542/542
(100 %)
2 diff
(99.7 %id)
BG231688 blood, lymphocyte .a 5273 to 5814 542 to 1       542/542
(100 %)
0 diff
(100 %id)
AA687489 normal prostate, Prostate .a 5294 to 5554 1 to 259   fully sequenced,   259/259
(100 %)
2 diff
(99.3 %id)
CB177927 Pancreas, Purified pancreatic islet .a 5311 to 5816 506 to 1   tiling clone, fully sequenced,   506/506
(100 %)
0 diff
(100 %id)
AI961208 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 5327 to 5814 488 to 1       488/488
(100 %)
0 diff
(100 %id)
BQ007400 placenta .a 5342 to 5814 490 to 18   AAA   473/473
(100 %)
0 diff
(100 %id)
BM313450 Pancreas, Purified pancreatic islet .a 5344 to 5813 470 to 1       470/470
(100 %)
0 diff
(100 %id)
AI890470 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 5354 to 5814 461 to 1       461/461
(100 %)
0 diff
(100 %id)
AW170342 cervix, tumor .a 5361 to 5787 1 to 427     Submitted on the opposite strand 427/427
(100 %)
0 diff
(100 %id)
BP394995 pancreatic islet .a 5365 to 5812 1 to 448     Submitted on the opposite strand 448/448
(100 %)
0 diff
(100 %id)
DB374099 placenta .a 5367 to 5814 450 to 1       450/450
(100 %)
7 diff
(98.5 %id)
BM706872 eye, optic nerve .a 5383 to 5814 9 to 440   fully sequenced,   432/440
(98 %)
6 diff
(98.7 %id)
H98626.
matches multiple genes
melanocyte .a 5384 to 5814 431 to 1     also hits gene CRYBB2P1andADRBK2 431/431
(100 %)
0 diff
(100 %id)
AI926551 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 5387 to 5815 429 to 1       429/429
(100 %)
0 diff
(100 %id)
BM144653 leukopheresis .a 5387 to 5816 444 to 15       430/444
(96 %)
0 diff
(100 %id)
AI052074 liver and spleen .a 5390 to 5814 435 to 11   AAA   425/425
(100 %)
0 diff
(100 %id)
AI499297 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 5392 to 5815 424 to 1       424/424
(100 %)
0 diff
(100 %id)
AI634194 Kidney, renal cell tumor .a 5393 to 5814 422 to 1       422/422
(100 %)
0 diff
(100 %id)
AW089998 brain, tumor, 5 pooled (see description) .a 5394 to 5814 421 to 1       421/421
(100 %)
0 diff
(100 %id)
BG059803 brain, glioblastoma without EGFR amplification .a 5397 to 5814 418 to 1       418/418
(100 %)
0 diff
(100 %id)
BM994008 lung, Metastatic Chondrosarcoma .a 5405 to 5814 428 to 19   AAA   410/410
(100 %)
0 diff
(100 %id)
AI523115 aorta .a 5406 to 5790 385 to 1       385/385
(100 %)
0 diff
(100 %id)
H15451 whole brain .a 5407 to 5814 426 to 19   AAA   408/408
(100 %)
0 diff
(100 %id)
DB378763 placenta .a 5412 to 5788 377 to 1       377/382
(98 %)
5 diff
(98.7 %id)
AI266272 borderline ovarian carcinoma, ovary .a 5421 to 5816 403 to 8       396/403
(98 %)
0 diff
(100 %id)
AA281206 germinal center B cell .a 5422 to 5814 393 to 1   fully sequenced,   393/393
(100 %)
0 diff
(100 %id)
AI589746 adenocarcinoma, Pancreas .a 5429 to 5815 387 to 1       387/387
(100 %)
0 diff
(100 %id)
AA281605 germinal center B cell .a 5430 to 5814 385 to 1       385/385
(100 %)
0 diff
(100 %id)
BI793275 Islets of Langerhans, Pancreas .a 5436 to 5814 1 to 379       379/379
(100 %)
0 diff
(100 %id)
N54977 liver and spleen .a 5437 to 5814 380 to 1   fully sequenced,   380/380
(100 %)
2 diff
(99.5 %id)
BI793196 Islets of Langerhans, Pancreas .a 5437 to 5814 1 to 378   AAA   378/378
(100 %)
0 diff
(100 %id)
BU728207 eye, optic nerve .a 5446 to 5810 387 to 23   fully sequenced,   365/387
(94 %)
0 diff
(100 %id)
AI222661 Kidney .a 5452 to 5814 374 to 12   AAA   363/363
(100 %)
0 diff
(100 %id)
AI128449 uterus .a 5468 to 5810 356 to 14   AAA   343/343
(100 %)
0 diff
(100 %id)
N75116 multiple sclerosis lesions .a 5471 to 5814 1 to 344   AAA   344/344
(100 %)
0 diff
(100 %id)
AA043986 uterus .a 5502 to 5814 314 to 1   fully sequenced,   314/314
(100 %)
0 diff
(100 %id)
AA687433 normal prostate, Prostate .a 5524 to 5814 290 to 1   fully sequenced,   290/290
(100 %)
0 diff
(100 %id)
H97888 melanocyte .a 5577 to 5813 237 to 1       237/237
(100 %)
0 diff
(100 %id)
AA441971   .a 5586 to 5818 233 to 1   fully sequenced,   233/233
(100 %)
2 diff
(99.2 %id)
AW934881 denis_drash .a 5588 to 5744 157 to 1     Submitted on the opposite strand 157/157
(100 %)
0 diff
(100 %id)
Z28481 leg muscle, skeletal muscle .a 5636 to 5814 179 to 1       179/179
(100 %)
0 diff
(100 %id)
AW512728 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 5638 to 5815 178 to 1       178/178
(100 %)
0 diff
(100 %id)
FN059961 breast carcinoma .a 5659 to 5772 1 to 114       114/114
(100 %)
0 diff
(100 %id)
DB452090 testis .b 1 to 501 9 to 509       509/509
(100 %)
4 diff
(99.3 %id)
BG721398 testis .b 1 to 868 13 to 872       867/889
(97 %)
30 diff
(96.7 %id)
DA089765 cerebellum .b 1 to 535 8 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
CB990634 Human Placenta, placenta .b 1 to 758 28 to 804       783/807
(97 %)
26 diff
(96.8 %id)
CD101705 Human Placenta, placenta .b 1 to 739 28 to 779       758/799
(94 %)
24 diff
(97.0 %id)
BP282486 bone marrow .b 1 to 576 7 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
DA742179   .b 1 to 486 8 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
DA050281   .b 1 to 558 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
TI_44348037   .b 10 to 884 87 to 961       875/964
(90 %)
31 diff
(96.8 %id)
CD109805 Human Placenta, placenta .b 17 to 766 27 to 790       764/795
(96 %)
24 diff
(97.0 %id)
DB444944 testis .b 29 to 464 1 to 436       436/436
(100 %)
2 diff
(99.6 %id)
DB458355 testis .b 34 to 503 1 to 470       470/470
(100 %)
1 diff
(99.8 %id)
AI244003 Kidney .b 42 to 380 1 to 339     Submitted on the opposite strand 339/339
(100 %)
0 diff
(100 %id)
AI806495 pooled .b 42 to 508 1 to 467     Submitted on the opposite strand 467/467
(100 %)
0 diff
(100 %id)
AW166537 cervix .b 42 to 462 1 to 421     Submitted on the opposite strand 421/421
(100 %)
0 diff
(100 %id)
TI_57176974   .b 42 to 509 531 to 65     Submitted on the opposite strand 467/701
(66 %)
0 diff
(100 %id)
AW575697.
matches multiple genes
lymph .b 43 to 494 1 to 452     Submitted on the opposite strand, also hits gene GNG7 452/452
(100 %)
0 diff
(100 %id)
BF594545 colon, colon tumor, RER+ .b 44 to 597 1 to 554     Submitted on the opposite strand 554/554
(100 %)
0 diff
(100 %id)
BI831296 brain, medulla .b 54 to 503 448 to 1     Submitted on the opposite strand 448/453
(98 %)
5 diff
(98.9 %id)
BG014706 placenta_normal .b 187 to 469 284 to 1       284/284
(100 %)
6 diff
(97.9 %id)
DA244501 brain .b 318 to 922 2 to 606   tiling clone, capped   605/605
(100 %)
1 diff
(99.9 %id)
AW391281 stomach .b 434 to 742 331 to 21       311/344
(90 %)
0 diff
(100 %id)
AL556848 placenta .b 508 to 1443 1 to 936       936/936
(100 %)
2 diff
(99.8 %id)
DB073008 testis .b 620 to 1165 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
AW450392   .b 625 to 1034 414 to 4   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 411/414
(99 %)
0 diff
(100 %id)
DA926471 small intestine .b 708 to 1267 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
CA419459 Bone, Human Chondrosarcoma Cell Line .b 712 to 1309 19 to 616     Submitted on the opposite strand 598/598
(100 %)
0 diff
(100 %id)
DA693952   .b 718 to 1159 2 to 443   capped   442/442
(100 %)
0 diff
(100 %id)
BX391965   .b 797 to 1700 906 to 7       900/906
(99 %)
10 diff
(98.9 %id)
TI_154133284   .b 805 to 929 857 to 979     Submitted on the opposite strand 803/1043
(76 %)
31 diff
(97.1 %id)
BM923647 pooled colon, kidney, stomach .b 849 to 1700 1 to 858   tiling clone,   858/1036
(82 %)
20 diff
(98.1 %id)
DR006021 Prostate .b 929 to 1527 1 to 599       599/599
(100 %)
0 diff
(100 %id)
DA652343   .b 938 to 1484 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
BY799097 eye .b 967 to 1247 1 to 281       281/281
(100 %)
0 diff
(100 %id)
DB238602 trachea .b 971 to 1561 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DB070592 testis .b 1052 to 1596 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
TI_59394545   .b 1056 to 1824 87 to 856       770/775
(99 %)
6 diff
(99.3 %id)
BM016152 breast, mammary adenocarcinoma, cell line .b 1057 to 1824 1 to 769       769/774
(99 %)
6 diff
(99.3 %id)
BG983345 colon_normal .b 1179 to 1519 1 to 341       341/341
(100 %)
0 diff
(100 %id)
AK296777 tongue, tumor tissue .b 1212 to 2299 1252 to 2339 T165A tiling clone,   2339/2339
(100 %)
6 diff
(99.8 %id)
BP251189 hippocampus .b 1218 to 1800 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DB159751 thymus .b 1222 to 1813 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA338802 hippocampus .b 1226 to 1817 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
CU447990 epidermis .b 1233 to 1790 571 to 14     Submitted on the opposite strand 558/592
(94 %)
0 diff
(100 %id)
AW373516 breast .b 1332 to 1922 11 to 600       590/600
(98 %)
9 diff
(98.5 %id)
DC334022 hippocampus .b 1408 to 1967 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DW437375 Liver .b 1665 to 1897 17 to 249       233/249
(93 %)
6 diff
(97.6 %id)
BE843882 testis_normal .b 1716 to 2104 386 to 1       386/392
(98 %)
5 diff
(98.8 %id)
AW609896 stomach .b 1784 to 1989 211 to 5       207/211
(98 %)
4 diff
(98.2 %id)
NM_022745.3   .c 1 to 4127 1 to 4127 exact RefSeq, AAA   4127/4127
(100 %)
0 diff
(100 %id)
BX417683 placenta .c 7 to 1020 1 to 1014   tiling clone,   1014/1062
(95 %)
18 diff
(98.4 %id)
AK026004   .c 64 to 1819 1 to 1756   available from FLJ, AAA   1756/1756
(100 %)
2 diff
(99.9 %id)
BG713959 brain, hypothalamus .c 65 to 730 1 to 668       668/793
(84 %)
7 diff
(99.2 %id)
BC008498 Brain, primitive neuroectodermal .c 70 to 1827 1 to 1758   tiling clone, available from MGC, AAA   1758/1758
(100 %)
4 diff
(99.8 %id)
BI596664 brain, hypothalamus .c 70 to 887 1 to 813       813/815
(99 %)
19 diff
(97.7 %id)
BG764756 melanotic melanoma, high MDR (cell line), skin .c 71 to 840 1 to 773       773/773
(100 %)
12 diff
(98.5 %id)
BG764889 melanotic melanoma, high MDR (cell line), skin .c 71 to 789 1 to 720       718/838
(85 %)
14 diff
(98.4 %id)
BC018781 Skin, melanotic melanoma, high MDR. .c 72 to 1821 1 to 1750   available from MGC, AAA   1750/1750
(100 %)
2 diff
(99.9 %id)
BC071731 Blood, adult leukocytes .c 72 to 1827 1 to 1756   available from MGC, AAA   1756/1756
(100 %)
2 diff
(99.9 %id)
TI_57233087   .c 72 to 718 86 to 779       513/1041
(49 %)
33 diff
(96.9 %id)
TI_45209092   .c 72 to 887 87 to 897       811/899
(90 %)
21 diff
(97.7 %id)
BG326750 Kidney, renal cell adenocarcinoma .c 73 to 864 1 to 792       792/1131
(70 %)
22 diff
(98.1 %id)
BG823489 adenocarcinoma cell line, colon .c 73 to 897 1 to 832       832/896
(92 %)
29 diff
(96.8 %id)
BU855658 ovary, teratocarcinoma, cell line .c 74 to 782 1 to 721       721/879
(82 %)
22 diff
(97.5 %id)
BU931160 ovary, teratocarcinoma, cell line .c 74 to 969 1 to 903       902/940
(95 %)
22 diff
(97.7 %id)
BG766495 melanotic melanoma, high MDR (cell line), skin .c 76 to 745 1 to 669       669/669
(100 %)
7 diff
(99.0 %id)
CR601689 adult brain .c 81 to 1790 1 to 1710   tiling clone,   1710/1710
(100 %)
0 diff
(100 %id)
BU845821 ovary, teratocarcinoma, cell line .c 81 to 980 1 to 910       909/946
(96 %)
17 diff
(98.3 %id)
BU175861 large cell carcinoma, lung .c 83 to 942 1 to 864       862/923
(93 %)
22 diff
(97.7 %id)
AL550850 placenta, Placenta Cot 25-normalized .c 84 to 877 1 to 794       794/794
(100 %)
3 diff
(99.7 %id)
BU517164 leiomyosarcoma, uterus .c 87 to 786 1 to 703       703/920
(76 %)
21 diff
(97.8 %id)
BF205424 muscle, rhabdomyosarcoma .c 88 to 852 1 to 758       758/758
(100 %)
21 diff
(97.3 %id)
BG284534 adenocarcinoma, cell line, Prostate .c 88 to 787 1 to 703       703/920
(76 %)
12 diff
(98.7 %id)
BU553693 ovary, teratocarcinoma, cell line .c 88 to 861 1 to 776       776/903
(85 %)
17 diff
(98.2 %id)
CR600112 fetal brain .c 90 to 1781 1 to 1692       1692/1692
(100 %)
0 diff
(100 %id)
AL537615 brain, fetal brain .c 90 to 1003 1 to 913   fully sequenced,   913/913
(100 %)
4 diff
(99.6 %id)
BU553824 ovary, teratocarcinoma, cell line .c 90 to 1002 1 to 918       917/918
(99 %)
22 diff
(97.7 %id)
BU557190 ovary, teratocarcinoma, cell line .c 90 to 901 1 to 819       819/866
(94 %)
13 diff
(98.5 %id)
BU859065 ovary, teratocarcinoma, cell line .c 90 to 979 1 to 891       891/891
(100 %)
2 diff
(99.8 %id)
CV573251 cornea, eye .c 93 to 708 1 to 616       616/616
(100 %)
1 diff
(99.9 %id)
DR006941 Spleen .c 102 to 807 7 to 712       706/712
(99 %)
1 diff
(99.9 %id)
CR999311 T-Lymphocytes .c 105 to 779 1 to 678       678/685
(98 %)
6 diff
(99.2 %id)
BI115180 muscle, rhabdomyosarcoma .c 107 to 801 1 to 693       693/693
(100 %)
12 diff
(98.3 %id)
CV814542 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 110 to 894 1 to 783       783/887
(88 %)
17 diff
(98.1 %id)
BU195642 leiomyosarcoma, uterus .c 114 to 996 1 to 886       886/897
(98 %)
20 diff
(97.8 %id)
BG163867 hypernephroma, cell line, Kidney .c 124 to 864 1 to 739       739/1002
(73 %)
23 diff
(97.8 %id)
BM476758 leiomyosarcoma, uterus .c 124 to 787 1 to 664       664/1156
(57 %)
6 diff
(99.5 %id)
AL548897 placenta, Placenta Cot 25-normalized .c 129 to 866 1 to 736       736/736
(100 %)
7 diff
(99.1 %id)
DA239964 brain .c 269 to 852 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
BU181574 eye, retinoblastoma .c 285 to 1158 1 to 874       874/875
(99 %)
5 diff
(99.5 %id)
AW376819 colon .c 442 to 957 1 to 516       516/516
(100 %)
0 diff
(100 %id)
AW376824 colon .c 442 to 920 1 to 479       479/479
(100 %)
0 diff
(100 %id)
AW376826 colon .c 442 to 1000 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
AW578354 colon .c 442 to 1083 1 to 641       641/642
(99 %)
8 diff
(98.8 %id)
AW578356 colon .c 442 to 1007 1 to 566       566/566
(100 %)
3 diff
(99.5 %id)
AW848234 colon .c 442 to 1064 1 to 623       623/623
(100 %)
2 diff
(99.7 %id)
AW848374 colon .c 442 to 927 1 to 488       486/488
(99 %)
3 diff
(99.4 %id)
AW848735 colon .c 442 to 873 1 to 432       432/432
(100 %)
0 diff
(100 %id)
CR736995   .c 443 to 984 1 to 542       542/542
(100 %)
1 diff
(99.9 %id)
EL955153 eyeball .c 452 to 1003 45 to 593       551/593
(92 %)
6 diff
(99.0 %id)
BE274355 melanotic melanoma, skin .c 458 to 1218 1 to 759       759/760
(99 %)
8 diff
(99.0 %id)
CX786468 human embryonic stem cells .c 463 to 1261 1 to 799       799/799
(100 %)
1 diff
(99.9 %id)
BF969663 adrenal cortex carcinoma, cell line, adrenal gland .c 469 to 1214 1 to 750       750/824
(91 %)
13 diff
(98.5 %id)
DA757896   .c 476 to 996 2 to 521   capped   520/520
(100 %)
4 diff
(99.3 %id)
CT003457 T-Lymphocytes .c 484 to 1330 1 to 847       847/852
(99 %)
7 diff
(99.2 %id)
BM699837 eye, lens .c 505 to 951 1 to 447       447/447
(100 %)
0 diff
(100 %id)
BE392889 endometrium, adenocarcinoma cell line, uterus .c 530 to 1133 1 to 610       610/610
(100 %)
6 diff
(99.1 %id)
DA804264 brain .c 530 to 1073 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
BG105010 adrenal cortex carcinoma, cell line, adrenal gland .c 552 to 1366 1 to 805       805/862
(93 %)
21 diff
(97.6 %id)
AW849075 colon .c 562 to 1064 503 to 1       503/503
(100 %)
6 diff
(98.9 %id)
CF144823 CNCAP(3)T-225 cell line, Prostate .c 589 to 998 1 to 410       410/410
(100 %)
5 diff
(98.8 %id)
CK003723 brain/CNS, Human Brain - Cerebellar Cortex .c 591 to 1266 1 to 673       673/677
(99 %)
18 diff
(97.4 %id)
DA233488 brain .c 596 to 1170 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
TI_154176847   .c 596 to 1153 80 to 638       559/559
(100 %)
12 diff
(97.9 %id)
TI_154176907   .c 596 to 1127 81 to 611       531/532
(99 %)
9 diff
(98.4 %id)
BE742244 adenocarcinoma cell line, ovary .c 602 to 1430 1 to 826       826/837
(98 %)
25 diff
(97.1 %id)
AA150795 uterus .c 622 to 1065 1 to 444       444/444
(100 %)
4 diff
(99.1 %id)
BY995865   .c 663 to 1391 9 to 737       729/737
(98 %)
6 diff
(99.2 %id)
DA336202 hippocampus .c 667 to 1250 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
BF834088 head_neck .c 701 to 1148 458 to 11     Submitted on the opposite strand 448/466
(96 %)
1 diff
(99.8 %id)
BQ320405 colon .c 701 to 1044 348 to 4       345/356
(96 %)
6 diff
(98.4 %id)
BG755936 B-cells, primary B-cells from tonsils (cell line) .c 715 to 1416 1 to 702       702/702
(100 %)
1 diff
(99.9 %id)
BI053437 placenta_normal .c 731 to 1152 1 to 422       422/422
(100 %)
4 diff
(99.1 %id)
AW956777   .c 735 to 1347 1 to 613       613/613
(100 %)
5 diff
(99.2 %id)
BU167643 melanotic melanoma, skin .c 744 to 1629 12 to 902       891/906
(98 %)
21 diff
(97.7 %id)
CD512469 Pooled-Skin .c 744 to 1438 1 to 702       702/762
(92 %)
16 diff
(98.0 %id)
BE897049 melanotic melanoma, skin .c 748 to 1528 1 to 769       769/944
(81 %)
17 diff
(98.2 %id)
BM015691 breast, mammary adenocarcinoma, cell line .c 755 to 1627 1 to 876       876/876
(100 %)
12 diff
(98.7 %id)
TI_59393954   .c 755 to 1627 92 to 967       876/876
(100 %)
12 diff
(98.7 %id)
DB285957 uterus .c 784 to 1333 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
AA177127   .c 787 to 1273 493 to 11       483/549
(87 %)
17 diff
(97.0 %id)
TI_154189927   .c 844 to 1682 48 to 872       825/982
(84 %)
22 diff
(97.8 %id)
CF126859 Chondrosarcoma Lung Metastasis cell lines, lung .c 848 to 1593 1 to 744       744/747
(99 %)
6 diff
(99.2 %id)
BE081142 breast .c 886 to 1173 1 to 288       288/288
(100 %)
0 diff
(100 %id)
AL574706 placenta, Placenta Cot 25-normalized .c 958 to 1789 850 to 19       832/850
(97 %)
0 diff
(100 %id)
AL537614 brain, fetal brain .c 973 to 1747 808 to 35   fully sequenced,   774/808
(95 %)
16 diff
(98.1 %id)
AL573286 placenta, Placenta Cot 25-normalized .c 1016 to 1799 784 to 1       784/784
(100 %)
2 diff
(99.8 %id)
CN478478 eye, lens .c 1229 to 1827 617 to 19   AAA   599/599
(100 %)
2 diff
(99.7 %id)
AA150671 uterus .c 1403 to 1827 429 to 1       429/429
(100 %)
6 diff
(98.7 %id)
CT004896 T-Lymphocytes .d 1 to 521 1 to 521   tiling clone,   521/521
(100 %)
2 diff
(99.7 %id)
BM459739 leiomyosarcoma, uterus .d 70 to 748 27 to 706       680/977
(69 %)
18 diff
(98.2 %id)
DB483450 hippocampus .d 104 to 563 1 to 460       460/460
(100 %)
3 diff
(99.4 %id)
NM_001042546.1   .d 104 to 4026 1 to 3923   RefSeq, AAA   3923/3923
(100 %)
0 diff
(100 %id)
BX438342 neuroblastoma .d 165 to 1239 13 to 1079       1067/1080
(98 %)
19 diff
(98.3 %id)
CV572191 cornea, eye .d 169 to 785 1 to 617       617/617
(100 %)
1 diff
(99.9 %id)
DA109792 cerebellum .d 174 to 727 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA136969 alzheimer cortex .d 174 to 716 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA244814 brain .d 174 to 691 2 to 519   capped   518/518
(100 %)
2 diff
(99.7 %id)
DA247105 brain .d 174 to 753 2 to 581   tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
DA252111 caudate nucleus .d 174 to 660 2 to 488   capped   487/487
(100 %)
2 diff
(99.6 %id)
DA561570 heart .d 174 to 666 2 to 494   capped   493/493
(100 %)
1 diff
(99.8 %id)
BG424182 Kidney, renal cell adenocarcinoma .d 174 to 796 1 to 626       626/1106
(56 %)
13 diff
(98.9 %id)
DB505358 hypothalamus .d 176 to 639 1 to 464       464/464
(100 %)
1 diff
(99.8 %id)
TI_154163141   .d 176 to 699 79 to 602       524/733
(71 %)
27 diff
(96.4 %id)
CN418165 embryonic stem cells, DMSO-treated H9 cellline .d 177 to 410 1 to 234       234/234
(100 %)
0 diff
(100 %id)
BU845195 ovary, teratocarcinoma, cell line .d 177 to 677 1 to 508       506/909
(55 %)
13 diff
(98.6 %id)
DA248738 brain .d 182 to 748 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
BI458279 brain, hypothalamus .d 182 to 950 1 to 781       781/947
(82 %)
21 diff
(97.8 %id)
CN418164 embryonic stem cells, cell lines H1, H7, andH9 .d 186 to 715 1 to 530       530/530
(100 %)
1 diff
(99.9 %id)
DB500543 hypothalamus .d 187 to 659 1 to 473       473/473
(100 %)
2 diff
(99.6 %id)
DA211775 brain .d 193 to 682 2 to 492   capped   491/491
(100 %)
3 diff
(99.4 %id)
DA387650 thalamus .d 193 to 781 2 to 591   capped   590/590
(100 %)
3 diff
(99.5 %id)
DB453884 testis .d 200 to 688 1 to 489       489/489
(100 %)
2 diff
(99.6 %id)
DN992768 brain, whole brain .d 223 to 747 1 to 525       525/525
(100 %)
4 diff
(99.3 %id)
BF791966 adrenal cortex carcinoma, cell line, adrenal gland .d 432 to 1217 1 to 787       787/1117
(70 %)
10 diff
(99.2 %id)
CR623971 T cells (Jurkat cell line) Cot10-normalized .d 467 to 1688 1 to 1222   tiling clone,   1222/1222
(100 %)
0 diff
(100 %id)
AL558848 T cells from T cell leukemia .d 467 to 1247 1 to 782   fully sequenced,   782/782
(100 %)
7 diff
(99.2 %id)
AK311271 thalamus .d 696 to 1659 1 to 964       964/964
(100 %)
1 diff
(99.9 %id)
DA408859 thalamus .d 697 to 1344 2 to 650   capped   649/649
(100 %)
1 diff
(99.9 %id)
AA397738   .d 797 to 1213 11 to 427       427/427
(100 %)
4 diff
(99.1 %id)
BG490061 large cell carcinoma, lung .d 803 to 1674 1 to 880       880/939
(93 %)
14 diff
(98.6 %id)
BP418652 small intestine .d 824 to 1358 1 to 535     Submitted on the opposite strand 535/535
(100 %)
0 diff
(100 %id)
AW386148 pnet .d 832 to 989 21 to 176       156/176
(88 %)
6 diff
(96.6 %id)
AW386146 pnet .d 834 to 989 8 to 163       156/163
(95 %)
6 diff
(96.4 %id)
FN136877 breast carcinoma .d 834 to 919 86 to 1     Submitted on the opposite strand 86/87
(98 %)
0 diff
(100 %id)
AW373184 breast .d 837 to 989 4 to 158       155/158
(98 %)
6 diff
(96.3 %id)
AW373163 breast .d 840 to 990 153 to 3       151/153
(98 %)
0 diff
(100 %id)
AW386132 pnet .d 840 to 974 141 to 8       134/141
(95 %)
0 diff
(100 %id)
AW386135 pnet .d 840 to 982 145 to 3       143/145
(98 %)
0 diff
(100 %id)
AW386138 pnet .d 840 to 989 1 to 150       150/150
(100 %)
0 diff
(100 %id)
AW386149 pnet .d 840 to 940 105 to 5       101/105
(96 %)
0 diff
(100 %id)
BF746813 breast .d 840 to 989 1 to 150       150/150
(100 %)
11 diff
(92.7 %id)
BF746816 breast .d 840 to 979 144 to 5     Submitted on the opposite strand 140/144
(97 %)
0 diff
(100 %id)
BF746818 breast .d 840 to 974 141 to 6     Submitted on the opposite strand 136/141
(96 %)
0 diff
(100 %id)
BF742781 breast .d 842 to 966 129 to 3     Submitted on the opposite strand 127/131
(96 %)
0 diff
(100 %id)
AW373160 breast .d 845 to 996 152 to 1       152/152
(100 %)
6 diff
(96.1 %id)
DA413173 thalamus .d 848 to 1401 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
FN096280 breast carcinoma .d 857 to 959 1 to 107       107/107
(100 %)
4 diff
(96.3 %id)
BE696094 colon .d 878 to 1429 557 to 7       551/557
(98 %)
0 diff
(100 %id)
CD653503 Embryonic Stem cells .d 880 to 1711 36 to 866       831/871
(95 %)
11 diff
(98.8 %id)
TI_149308595   .d 885 to 1726 916 to 92   AAA   825/1023
(80 %)
23 diff
(97.8 %id)
TI_154104011   .d 885 to 1726 904 to 79   AAA   826/939
(87 %)
22 diff
(97.7 %id)
BE080701 breast .d 896 to 1343 489 to 42     Submitted on the opposite strand 448/489
(91 %)
0 diff
(100 %id)
FN175577 breast carcinoma .d 919 to 994 1 to 75       75/75
(100 %)
5 diff
(93.4 %id)
CB144582 Liver .d 923 to 1494 1 to 572       572/572
(100 %)
0 diff
(100 %id)
TI_149273632   .d 925 to 1720 880 to 89   AAA   792/972
(81 %)
7 diff
(99.3 %id)
BI856390 breast, mammary adenocarcinoma, cell line .d 926 to 1526 169 to 770       602/771
(78 %)
5 diff
(99.4 %id)
TI_57190356   .d 926 to 1526 223 to 824       602/771
(78 %)
5 diff
(99.4 %id)
TI_149289029   .d 931 to 1726 874 to 87   AAA   788/814
(96 %)
25 diff
(97.0 %id)
AW849834 colon .d 943 to 1420 478 to 1       478/478
(100 %)
3 diff
(99.4 %id)
FN060231 breast carcinoma .d 953 to 1064 1 to 114       114/114
(100 %)
2 diff
(98.3 %id)
BE077477 breast .d 968 to 1138 174 to 5     Submitted on the opposite strand 170/180
(94 %)
0 diff
(100 %id)
BE694115 breast .d 969 to 1407 441 to 3       439/441
(99 %)
0 diff
(100 %id)
DA407588 thalamus .d 975 to 1536 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BQ014001 Chondrosarcoma, Left Pubic Bone .d 997 to 1720 740 to 17   AAA   724/724
(100 %)
2 diff
(99.8 %id)
AI905873 breast .d 1001 to 1298 303 to 5       299/595
(50 %)
0 diff
(100 %id)
EB387728 eye, optic nerve .d 1023 to 1725 1 to 703       703/703
(100 %)
3 diff
(99.6 %id)
BM708755 eye, RPE and Choroid .d 1042 to 1512 1 to 471       471/471
(100 %)
1 diff
(99.8 %id)
BQ324909 colon_ins .d 1049 to 1398 358 to 2       357/358
(99 %)
0 diff
(100 %id)
CA774696 Pancreas, Purified pancreatic islet .d 1054 to 1704 675 to 26       650/675
(96 %)
0 diff
(100 %id)
BQ774855 Bone, Human Chondrosarcoma Cell Line .d 1057 to 1726 688 to 19   AAA   670/670
(100 %)
1 diff
(99.9 %id)
BU675955 lung, Primary Lung Epithelial Cells .d 1058 to 1720 679 to 17   AAA   663/663
(100 %)
2 diff
(99.7 %id)
CA446190 Chondrosarcoma, Left Pubic Bone .d 1058 to 1726 687 to 19   AAA   669/669
(100 %)
1 diff
(99.9 %id)
BQ368265 placenta_normal .d 1062 to 1664 1 to 603       603/603
(100 %)
3 diff
(99.6 %id)
BM970725 lung .d 1068 to 1726 677 to 19   AAA   659/659
(100 %)
3 diff
(99.6 %id)
BU624892 cell lines, Enchondroma .d 1074 to 1726 672 to 19   AAA   654/654
(100 %)
5 diff
(99.3 %id)
W17035 lung .d 1085 to 1486 1 to 397   fully sequenced,   397/397
(100 %)
2 diff
(99.5 %id)
BM997040 Chondrosarcoma, Left Pubic Bone .d 1086 to 1720 651 to 17   AAA   635/635
(100 %)
1 diff
(99.9 %id)
BM993803 Bone, Subchondral Bone .d 1086 to 1720 651 to 17   AAA   635/635
(100 %)
1 diff
(99.9 %id)
CN479334 Bone, Subchondral Bone .d 1086 to 1720 651 to 17   AAA   635/635
(100 %)
1 diff
(99.9 %id)
EB386451 eye, optic nerve .d 1089 to 1720 1 to 632   AAA   632/632
(100 %)
1 diff
(99.9 %id)
CB157540 Liver .d 1103 to 1651 1 to 549       549/549
(100 %)
0 diff
(100 %id)
DA144276 amygdala .d 1136 to 1703 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
BQ961563 leiomyosarcoma, uterus .d 1185 to 1721 1 to 538       538/538
(100 %)
2 diff
(99.7 %id)
AI743304 pooled .d 1191 to 1722 535 to 4       532/535
(99 %)
0 diff
(100 %id)
AI653592 ovary, tumor, 5 pooled (see description) .d 1194 to 1726 543 to 11   AAA   533/533
(100 %)
1 diff
(99.9 %id)
CA952400 Pancreas, Purified pancreatic islet .d 1196 to 1722 530 to 4       527/530
(99 %)
0 diff
(100 %id)
DB306406.
matches multiple genes
caudate nucleus .d 1203 to 1726 524 to 1     also hits gene yatiri 524/524
(100 %)
1 diff
(99.9 %id)
AL580574 T cells from T cell leukemia .d 1217 to 1683 474 to 4   fully sequenced,   471/474
(99 %)
21 diff
(95.6 %id)
DA484182 brain .d 1218 to 1734 2 to 518   capped   517/517
(100 %)
3 diff
(99.5 %id)
BG026226 Bone, osteosarcoma, cell line .d 1219 to 1726 1 to 508   AAA   508/508
(100 %)
1 diff
(99.9 %id)
DA744203   .d 1227 to 1787 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
CB052441 leiomyosarcoma, soft tissue .d 1232 to 1726 9 to 503   fully sequenced, AAA   495/503
(98 %)
6 diff
(98.9 %id)
TI_154191064   .d 1232 to 1726 50 to 544   AAA   495/495
(100 %)
1 diff
(99.8 %id)
CF129372 Chondrosarcoma Lung Metastasis cell lines, lung .d 1233 to 1726 1 to 494   AAA   494/494
(100 %)
1 diff
(99.8 %id)
AI188403 placenta .d 1239 to 1720 495 to 14   AAA   482/482
(100 %)
0 diff
(100 %id)
AA447891   .d 1240 to 1514 1 to 275   fully sequenced,   275/275
(100 %)
1 diff
(99.7 %id)
DB576627 hypothalamus .d 1242 to 1718 1 to 477     Submitted on the opposite strand 477/477
(100 %)
2 diff
(99.6 %id)
CR607719 Placenta Cot 25-normalized .d 1243 to 1692 1 to 450       450/450
(100 %)
0 diff
(100 %id)
TI_157613349   .d 1246 to 1726 571 to 91   AAA   481/532
(90 %)
6 diff
(98.9 %id)
AI823726 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 1250 to 1728 478 to 1       478/478
(100 %)
2 diff
(99.6 %id)
AI590822 normal gingiva (cell line from immortalizedkeratinocytes) .d 1251 to 1712 471 to 10       462/471
(98 %)
0 diff
(100 %id)
BQ229864 large cell carcinoma, lung .d 1251 to 2136 1 to 891       891/893
(99 %)
10 diff
(98.9 %id)
BF747188 breast .d 1253 to 1558 305 to 1     Submitted on the opposite strand 305/305
(100 %)
14 diff
(95.5 %id)
BM703939 eye, Retina Foveal and Macular .d 1254 to 1728 1 to 475   fully sequenced,   475/475
(100 %)
3 diff
(99.4 %id)
AI128814 heart .d 1259 to 1728 471 to 2       470/471
(99 %)
0 diff
(100 %id)
AA503790 colon .d 1260 to 1726 467 to 1       467/467
(100 %)
2 diff
(99.6 %id)
AI734992 colon .d 1260 to 1726 467 to 1       467/467
(100 %)
2 diff
(99.6 %id)
AW262902 brain, three pooled meningiomas .d 1260 to 1726 467 to 1       467/467
(100 %)
1 diff
(99.8 %id)
AI332562 lung .d 1266 to 1726 461 to 1       461/461
(100 %)
1 diff
(99.8 %id)
AA633586   .d 1271 to 1685 415 to 1       415/415
(100 %)
1 diff
(99.8 %id)
CB052440 leiomyosarcoma, soft tissue .d 1272 to 1726 493 to 32   fully sequenced, AAA   462/462
(100 %)
8 diff
(98.3 %id)
AA342290 Spleen .d 1273 to 1726 455 to 1       455/455
(100 %)
3 diff
(99.4 %id)
AW028074 brain, glioblastoma (pooled) .d 1282 to 1720 439 to 1       439/439
(100 %)
2 diff
(99.6 %id)
DA502963 brain .d 1285 to 1841 2 to 558   capped   557/561
(99 %)
3 diff
(99.5 %id)
DB513378 testis .d 1285 to 1712 1 to 428     Submitted on the opposite strand 428/439
(97 %)
9 diff
(98.0 %id)
DB519339 testis .d 1285 to 1720 1 to 436     Submitted on the opposite strand 436/436
(100 %)
2 diff
(99.6 %id)
AA514942 breast .d 1285 to 1725 441 to 1       441/441
(100 %)
1 diff
(99.8 %id)
FN109101 breast carcinoma .d 1296 to 1380 1 to 85       85/85
(100 %)
0 diff
(100 %id)
EC575313 Prostate .d 1301 to 1392 1 to 92       92/92
(100 %)
0 diff
(100 %id)
EC488858 Prostate .d 1303 to 1392 1 to 90       90/90
(100 %)
0 diff
(100 %id)
AI190621 heart .d 1313 to 1726 425 to 12   AAA   414/414
(100 %)
1 diff
(99.8 %id)
AI628159 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d 1313 to 1726 414 to 1       414/414
(100 %)
1 diff
(99.8 %id)
AI613284 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .d 1314 to 1726 431 to 19   AAA   413/413
(100 %)
1 diff
(99.8 %id)
AI289153 2 pooled tumors (clear cell type), Kidney .d 1315 to 1722 409 to 2       408/409
(99 %)
0 diff
(100 %id)
AI130845 heart .d 1325 to 1728 407 to 4       404/407
(99 %)
0 diff
(100 %id)
AI290337 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1325 to 1722 400 to 3       398/400
(99 %)
0 diff
(100 %id)
AI240564 liver and spleen .d 1327 to 1726 413 to 14   AAA   400/400
(100 %)
1 diff
(99.8 %id)
FN142659 breast carcinoma .d 1340 to 1435 1 to 100       100/100
(100 %)
5 diff
(95.0 %id)
DA600046   .d 1340 to 1903 2 to 565   capped   564/564
(100 %)
3 diff
(99.5 %id)
BU169791 melanotic melanoma, skin .d 1404 to 2282 1 to 888       888/892
(99 %)
12 diff
(98.7 %id)
FN172032 breast carcinoma .d 1416 to 1513 1 to 98       98/98
(100 %)
3 diff
(97.0 %id)
N89779 lung .d 1456 to 1723 269 to 1   fully sequenced,   269/269
(100 %)
0 diff
(100 %id)
W60170 Pancreas, pancreatic islet .d 1469 to 1539 1 to 71   fully sequenced, Submitted on the opposite strand 71/71
(100 %)
0 diff
(100 %id)
AI382976 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1476 to 1721 246 to 1       246/246
(100 %)
0 diff
(100 %id)
W52038 Pancreas, pancreatic islet .d 1478 to 1563 86 to 1   fully sequenced, Submitted on the opposite strand 86/86
(100 %)
0 diff
(100 %id)
AA448837   .d 1484 to 1720 237 to 1   fully sequenced,   237/237
(100 %)
0 diff
(100 %id)
AA995566 carcinoid, lung .d 1499 to 1725 227 to 1       227/227
(100 %)
0 diff
(100 %id)
BQ014827 Chondrosarcoma, Left Pubic Bone .d 1514 to 1726 231 to 19   AAA   213/213
(100 %)
0 diff
(100 %id)
AI498560 lymph node, lymphoma, follicular mixed small and largecell .d 1516 to 1723 208 to 1       208/208
(100 %)
0 diff
(100 %id)
AI470453 pooled .d 1540 to 1726 201 to 15   AAA   187/187
(100 %)
0 diff
(100 %id)
DA276238 corpus callosum .d 1545 to 2102 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA822688 pericardium .d 1545 to 2107 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BM664097 eye, Retina Foveal and Macular .d 1548 to 1726 197 to 19   fully sequenced, AAA   179/179
(100 %)
0 diff
(100 %id)
AI932409 adenocarcinoma, Pancreas .d 1550 to 1720 185 to 15   AAA   171/171
(100 %)
0 diff
(100 %id)
EC538199 Prostate .d 1611 to 1728 117 to 1       117/117
(100 %)
3 diff
(97.5 %id)
FN108921 breast carcinoma .d 1611 to 1724 1 to 114       114/116
(98 %)
1 diff
(99.2 %id)
FN158039 breast carcinoma .d 1638 to 1719 1 to 82       82/85
(96 %)
3 diff
(96.5 %id)
BQ422685 melanotic melanoma, skin .d 1666 to 2526 1 to 868   tiling clone,   868/885
(98 %)
14 diff
(98.5 %id)
DA151757 amygdala .d 1696 to 2224 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
AL134939 melanoma (MeWo cell line) .d 1719 to 2361 1 to 644       644/644
(100 %)
2 diff
(99.7 %id)
DA921168 small intestine .d 1831 to 2397 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA153649 amygdala .d 1840 to 2393 2 to 555   tiling clone, capped   554/554
(100 %)
1 diff
(99.9 %id)
DA357204 subthalamic nucleus .d 1840 to 2383 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA752118   .d 1955 to 2532 2 to 579   capped   578/578
(100 %)
4 diff
(99.4 %id)
DA005360   .d 2067 to 2616 2 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
CB118617 Liver .d 2136 to 2790 1 to 655       655/655
(100 %)
4 diff
(99.4 %id)
DA688200   .d 2145 to 2693 2 to 550   capped   549/549
(100 %)
4 diff
(99.3 %id)
DA828339 placenta .d 2310 to 3004 2 to 700   tiling clone, capped   699/780
(89 %)
16 diff
(98.0 %id)
BF969427 adrenal cortex carcinoma, cell line, adrenal gland .d 2421 to 2974 27 to 580       554/609
(90 %)
4 diff
(99.4 %id)
DA365277 subthalamic nucleus .d 2446 to 2986 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
CX782185 human embryonic stem cells .d 2458 to 3329 1 to 872       872/872
(100 %)
2 diff
(99.8 %id)
BG393563 embryonal carcinoma, cell line, testis .d 2487 to 3264 1 to 783       783/996
(78 %)
27 diff
(97.3 %id)
BM927137 brain .d 2501 to 3419 1 to 922       922/1042
(88 %)
31 diff
(97.1 %id)
AF111705 aorta .d 2520 to 4026 1 to 1507   tiling clone, AAA   1507/1507
(100 %)
0 diff
(100 %id)
DR158326 human embryonic stem cells differentiated toan early endodermal cell type .d 2622 to 3382 1 to 761       761/761
(100 %)
2 diff
(99.8 %id)
CX163363 human embryonic stem cells differentiated toan early endodermal cell type .d 2655 to 3476 13 to 834       822/834
(98 %)
6 diff
(99.3 %id)
CD239464 Pituitary .d 2673 to 3403 1 to 732       732/732
(100 %)
17 diff
(97.7 %id)
BM689823 eye, Retina Foveal and Macular .d 2955 to 3470 9 to 525       517/525
(98 %)
6 diff
(98.9 %id)
BM703628 eye, human retina .d 2969 to 3450 1 to 482       482/482
(100 %)
1 diff
(99.8 %id)
CB157866 Liver .d 3102 to 3629 1 to 528       528/528
(100 %)
0 diff
(100 %id)
CN358563 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 3263 to 3732 1 to 472       472/472
(100 %)
1 diff
(99.8 %id)
W79082 heart .d 3285 to 3624 1 to 341   fully sequenced,   341/341
(100 %)
1 diff
(99.8 %id)
FN120937 breast carcinoma .d 3355 to 3453 96 to 1     Submitted on the opposite strand 96/97
(98 %)
4 diff
(95.9 %id)
BG617785 Liver .d 3356 to 4003 1 to 648       648/648
(100 %)
0 diff
(100 %id)
BE881219 large cell carcinoma, undifferentiated, lung .d 3413 to 4030 1 to 614       614/619
(99 %)
7 diff
(98.9 %id)
AA196189 muscle, skeletal muscle .d 3418 to 4028 609 to 1       609/609
(100 %)
12 diff
(98.1 %id)
BQ752492 Prostate .d 3419 to 4030 618 to 7     Submitted on the opposite strand 612/618
(99 %)
0 diff
(100 %id)
AI444664 Liver .d 3453 to 4013 566 to 6       561/566
(99 %)
0 diff
(100 %id)
DB323039   .d 3459 to 4022 564 to 1       564/564
(100 %)
2 diff
(99.7 %id)
AI654099 Kidney .d 3481 to 4026 547 to 1       547/547
(100 %)
4 diff
(99.3 %id)
DB331926 small intestine .d 3503 to 4026 524 to 1       524/524
(100 %)
1 diff
(99.9 %id)
BM548162 brain, hippocampus .d 3505 to 4030 1 to 525   tiling clone,   525/1272
(41 %)
7 diff
(99.5 %id)
W93669 heart .d 3507 to 4026 530 to 1       530/534
(99 %)
15 diff
(97.2 %id)
BM661855 eye, Retina Foveal and Macular .d 3523 to 4026 522 to 19   AAA   504/504
(100 %)
1 diff
(99.9 %id)
AA573279 colon .d 3528 to 4026 499 to 1       499/499
(100 %)
7 diff
(98.6 %id)
R22613 placenta .d 3529 to 3794 1 to 273   fully sequenced,   273/273
(100 %)
5 diff
(98.2 %id)
AW450948   .d 3536 to 4026 508 to 18   AAA   491/491
(100 %)
2 diff
(99.6 %id)
DB571706 hypothalamus .d 3555 to 4026 1 to 472     Submitted on the opposite strand 472/472
(100 %)
2 diff
(99.6 %id)
BM929960 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 3560 to 4028 1 to 469   fully sequenced,   469/469
(100 %)
1 diff
(99.8 %id)
DB552367 hippocampus .d 3562 to 4026 1 to 465     Submitted on the opposite strand 465/465
(100 %)
1 diff
(99.8 %id)
BQ752529 Prostate .d 3581 to 4030 458 to 7     Submitted on the opposite strand 452/458
(98 %)
0 diff
(100 %id)
DB372835 placenta .d 3586 to 4026 443 to 1       443/451
(98 %)
5 diff
(98.9 %id)
W74436 heart .d 3594 to 4025 430 to 1   fully sequenced,   430/430
(100 %)
1 diff
(99.8 %id)
AA421789 ovarian tumor, ovary .d 3606 to 4026 421 to 1       421/421
(100 %)
1 diff
(99.8 %id)
AI276285 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 3614 to 4027 413 to 1       413/438
(94 %)
2 diff
(99.6 %id)
AI948676 Kidney .d 3618 to 4026 409 to 1       409/409
(100 %)
0 diff
(100 %id)
BF993506 placenta_normal .d 3622 to 3902 415 to 135       281/415
(67 %)
0 diff
(100 %id)
BG056684 brain, glioblastoma with probably TP53 mutation andwithout EGFR amplification .d 3625 to 4027 403 to 1       403/403
(100 %)
0 diff
(100 %id)
BG223346 brain, glioblastoma with probably TP53 mutation andwithout EGFR amplification .d 3630 to 4027 398 to 1       398/398
(100 %)
0 diff
(100 %id)
CX782127 human embryonic stem cells .d 3633 to 4026 421 to 28   AAA   394/394
(100 %)
3 diff
(99.3 %id)
DB531454 hippocampus .d 3652 to 4026 1 to 374     Submitted on the opposite strand 374/374
(100 %)
8 diff
(97.9 %id)
BF063005 colon, colon tumor, RER+ .d 3659 to 4026 368 to 1       368/368
(100 %)
3 diff
(99.2 %id)
AA993910 pooled .d 3673 to 4028 356 to 1       356/356
(100 %)
1 diff
(99.8 %id)
AJ710373 heart .d 3745 to 4026 1 to 282   AAA   282/282
(100 %)
0 diff
(100 %id)
BU730079 eye, human retina .d 3746 to 4022 295 to 19   AAA   277/277
(100 %)
0 diff
(100 %id)
R22614 placenta .d 3764 to 4022 268 to 1   fully sequenced,   268/268
(100 %)
4 diff
(98.6 %id)
BM684377 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 3960 to 4025 85 to 20   fully sequenced, AAA   66/66
(100 %)
0 diff
(100 %id)
AK295722 hippocampus .e 1 to 1085 1 to 1085 exact tiling clone,   1085/1085
(100 %)
2 diff
(99.9 %id)
CX163764 human embryonic stem cells differentiated toan early endodermal cell type .e 148 to 1021 18 to 890       873/890
(98 %)
7 diff
(99.3 %id)
BU430203 lymph .e 282 to 805 1 to 525       525/525
(100 %)
3 diff
(99.5 %id)
TI_154151547   .e 288 to 943 80 to 733       654/659
(99 %)
17 diff
(97.5 %id)
T98314 liver and spleen .e 309 to 610 34 to 347       314/348
(90 %)
30 diff
(91.4 %id)
BG620455 placenta .e 337 to 1112 1 to 766       766/766
(100 %)
20 diff
(97.4 %id)
DB229545 trachea .e 409 to 997 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
BU183854 melanotic melanoma, skin .e 410 to 1266 1 to 867   tiling clone,   867/871
(99 %)
19 diff
(97.9 %id)
T98259 liver and spleen .e 885 to 1156 276 to 2       275/487
(56 %)
0 diff
(100 %id)
AK302090 testis .f 1 to 998 1 to 998 exact tiling clone,   998/998
(100 %)
0 diff
(100 %id)
DB447483 testis .f 1 to 354 1 to 344       344/344
(100 %)
18 diff
(94.8 %id)
DC396922 testis .f 1 to 572 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
DC397478 testis .f 1 to 519 1 to 519       519/519
(100 %)
0 diff
(100 %id)
CD672360 eye, Iris .g 1 to 639 1 to 639 S51G E85A L137F S154T D178G ... tiling clone,   639/639
(100 %)
9 diff
(98.6 %id)
DB448244 testis .h 1 to 436 1 to 436   tiling clone,   436/439
(99 %)
5 diff
(98.9 %id)
DC394570 testis .h 23 to 741 1 to 718       718/815
(88 %)
3 diff
(99.7 %id)
AK301874 testis .h 24 to 1494 1 to 1471 exact tiling clone,   1471/1471
(100 %)
2 diff
(99.9 %id)
DC395841 testis .h 24 to 627 1 to 604       604/604
(100 %)
1 diff
(99.9 %id)
DC398676 testis .h 24 to 583 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
DC399125 testis .h 24 to 586 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
AK310338 testis .h 31 to 849 1 to 820       820/830
(98 %)
1 diff
(99.9 %id)
DC399658 testis .h 31 to 559 1 to 529       529/529
(100 %)
0 diff
(100 %id)
BE179483 head_neck .i 1 to 172 171 to 1   tiling clone, Submitted on the opposite strand 171/174
(98 %)
6 diff
(96.6 %id)
AW867035 stomach_normal .i 55 to 337 279 to 3   tiling clone,   277/287
(96 %)
0 diff
(100 %id)
BM711511 eye, optic nerve .i 188 to 801 1 to 614 exact     614/614
(100 %)
0 diff
(100 %id)
TI_151704448   .i 188 to 913 817 to 92 exact tiling clone, AAA   726/938
(77 %)
0 diff
(100 %id)
BG330283 large cell carcinoma, lung .j 1 to 679 1 to 662   tiling clone,   664/903
(73 %)
25 diff
(97.3 %id)
EC460880 Prostate .j 227 to 331 103 to 1   tiling clone,   103/110
(93 %)
2 diff
(98.2 %id)
EC554358 Prostate .j 227 to 321 92 to 1       92/105
(87 %)
9 diff
(91.5 %id)
EC569091 Prostate .j 227 to 321 91 to 1       91/104
(87 %)
8 diff
(92.4 %id)
BF881008 lung_tumor .j 252 to 667 2 to 419   tiling clone,   418/419
(99 %)
7 diff
(98.4 %id)
CF144724 CNCAP(3)T-225 cell line, Prostate .j 330 to 607 1 to 278       278/278
(100 %)
5 diff
(98.3 %id)
EC460045 Prostate .j 392 to 498 105 to 1       105/106
(99 %)
1 diff
(99.1 %id)
BF092852 testis_normal .j 435 to 863 431 to 1   tiling clone,   431/438
(98 %)
9 diff
(98.0 %id)
FN100614 breast carcinoma .j 530 to 622 94 to 1     Submitted on the opposite strand 94/94
(100 %)
1 diff
(99.0 %id)
EC574053 Prostate .j 552 to 638 1 to 86       86/94
(91 %)
4 diff
(95.8 %id)
BG716938 testis .k 1 to 517 1 to 517   tiling clone,   517/517
(100 %)
6 diff
(98.9 %id)
TI_154018249   .k 464 to 935 552 to 83   tiling clone, AAA   470/695
(67 %)
3 diff
(99.6 %id)
CA430038 cell lines, Chondrosarcoma .k 494 to 926 451 to 19   tiling clone, AAA   433/441
(98 %)
7 diff
(98.5 %id)
AW016248   .l 1 to 537 1 to 537 K12N   Submitted on the opposite strand 537/537
(100 %)
7 diff
(98.7 %id)
AW027466 pooled germ cell tumors .l 3 to 523 521 to 1 exact tiling clone,   521/521
(100 %)
0 diff
(100 %id)
BF110174 carcinoid, lung .l 32 to 484 1 to 453     Submitted on the opposite strand 453/453
(100 %)
1 diff
(99.8 %id)
BI088660 cervix .l 377 to 578 1 to 201   tiling clone, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 201/201
(100 %)
1 diff
(99.6 %id)
T96203 liver and spleen .m-u 1 to 267 10 to 283   tiling clone, fully sequenced,   282/283
(99 %)
6 diff
(97.9 %id)
DA329764 hippocampus .m-u 1 to 561 2 to 562   capped   561/561
(100 %)
5 diff
(99.2 %id)
AA405343   .m-u 42 to 539 1 to 495   tiling clone,   495/495
(100 %)
2 diff
(99.6 %id)
T96121 liver and spleen .m-u 237 to 610 378 to 1   fully sequenced,   378/378
(100 %)
9 diff
(97.7 %id)
DC320896 brain .m-u 345 to 861 1 to 518       518/518
(100 %)
2 diff
(99.7 %id)
AK296360 thalamus .m-u 514 to 1728 1 to 1215 exact tiling clone,   1215/1215
(100 %)
1 diff
(100.0 %id)
DC342687 thalamus .m-u 514 to 1057 1 to 544 exact     544/544
(100 %)
0 diff
(100 %id)
BE169761 head_neck .m-u 706 to 1117 1 to 414       414/414
(100 %)
16 diff
(96.2 %id)
AL137294 testis .m-u 753 to 4073 1 to 3320   tiling clone, available from DKFZ, AAA   3320/3320
(100 %)
10 diff
(99.7 %id)
TI_154104387   .n 1 to 914 952 to 45 exact tiling clone,   908/1042
(87 %)
16 diff
(98.5 %id)
N42247 placenta .o 1 to 452 1 to 456   tiling clone,   456/458
(99 %)
9 diff
(98.1 %id)
AW978026   .o 39 to 506 497 to 31   tiling clone, Submitted on the opposite strand 467/497
(93 %)
0 diff
(100 %id)
AA827657 germinal center B cell .o 233 to 506 314 to 41   AAA   274/305
(89 %)
0 diff
(100 %id)
AA806649 germinal center B cell .o 307 to 506 240 to 41   AAA   200/231
(86 %)
0 diff
(100 %id)
N32803 placenta .o 526 to 1115 589 to 1 F14S T15H S16Q K17X P18H ... tiling clone,   589/597
(98 %)
6 diff
(99.0 %id)
AA318803 adrenal gland .p 1 to 311 1 to 311 F24X A40X A75X M99X D100G tiling clone,   311/311
(100 %)
2 diff
(99.4 %id)
BF747916 breast .q 1 to 303 313 to 6   tiling clone, Submitted on the opposite strand 308/313
(98 %)
3 diff
(99.1 %id)
BG949262 breast .q 52 to 311 275 to 16   tiling clone,   260/275
(94 %)
0 diff
(100 %id)
BM767314 Ascites, stomach .r-u 1 to 677 1 to 677 exact tiling clone,   677/677
(100 %)
0 diff
(100 %id)
CR978184 T-Lymphocytes .r-u 350 to 1054 1 to 705   tiling clone,   705/707
(99 %)
1 diff
(99.9 %id)
BE831123 marrow .r-u 538 to 1054 519 to 3       517/519
(99 %)
0 diff
(100 %id)
BE831128 marrow .r-u 585 to 1108 533 to 11   tiling clone,   523/547
(95 %)
0 diff
(100 %id)
BQ711514 Spleen .s 1 to 923 1 to 958 Q2E N4T P5L F6S Y7T ... tiling clone,   958/958
(100 %)
34 diff
(96.5 %id)
BQ708486 Spleen .s 13 to 795 1 to 786   tiling clone,   786/872
(90 %)
10 diff
(98.9 %id)
BQ710706 Spleen .s 13 to 881 1 to 889   tiling clone,   889/890
(99 %)
42 diff
(95.3 %id)
BE931007 placenta_normal .s 347 to 582 37 to 272       236/272
(86 %)
6 diff
(97.8 %id)
FN051185 breast carcinoma .t-u 1 to 109 109 to 1   tiling clone, Submitted on the opposite strand 109/110
(99 %)
0 diff
(100 %id)
BQ372551 prostate_normal .t-u 35 to 412 392 to 14   tiling clone,   379/392
(96 %)
0 diff
(100 %id)
H52420 liver and spleen .t-u 183 to 547 1 to 366   tiling clone,   366/366
(100 %)
1 diff
(99.8 %id)
BF434160 fibrotheoma, ovary .t-u 432 to 970 1 to 539   tiling clone, Submitted on the opposite strand 539/539
(100 %)
1 diff
(99.9 %id)
AI078305 liver and spleen .t-u 993 to 1421 429 to 1   tiling clone,   429/429
(100 %)
0 diff
(100 %id)
H52421 liver and spleen .t-u 1042 to 1419 386 to 1       386/388
(99 %)
17 diff
(95.7 %id)
DC396144 testis .u 1 to 601 1 to 603 exact tiling clone,   603/603
(100 %)
2 diff
(99.7 %id)
DC397041 testis .va 1 to 574 1 to 574 exact tiling clone,   574/574
(100 %)
0 diff
(100 %id)
DB512468 testis .vb 1 to 441 1 to 441 G50D tiling clone, Submitted on the opposite strand 441/441
(100 %)
2 diff
(99.6 %id)
112 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m-u, .n, .o, .p, .q, .r-u, .s, .t-u, .u, .va, .vb Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI