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Gene ATP8B4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
104 supporting clones for gene ATP8B4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BF898265 marrow .a 1 to 425 17 to 440       424/440
(96 %)
6 diff
(98.7 %id)
BE241899 leukopheresis .a 1 to 320 1 to 320   tiling clone,   320/320
(100 %)
6 diff
(98.2 %id)
NM_024837.2   .a 2 to 5680 1 to 5679 exact RefSeq,   5679/5679
(100 %)
3 diff
(100.0 %id)
TI_2194644180   .a 3 to 1183 85 to 1250   tiling clone,   1166/1277
(91 %)
35 diff
(97.3 %id)
TI_2194645374   .a 3 to 1007 83 to 1082   tiling clone,   1000/1284
(77 %)
14 diff
(99.0 %id)
BF898268 marrow .a 5 to 443 25 to 462       438/463
(94 %)
6 diff
(98.8 %id)
BQ337344 marrow .a 11 to 435 1 to 430       430/430
(100 %)
20 diff
(95.4 %id)
BF895907 marrow .a 174 to 279 106 to 1     Submitted on the opposite strand 106/106
(100 %)
1 diff
(99.1 %id)
BQ337501 marrow .a 1039 to 1224 20 to 206   tiling clone,   187/206
(90 %)
7 diff
(96.7 %id)
DA315120 hippocampus .a 1524 to 2093 2 to 571   tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
BF898163 marrow .a 1767 to 2273 510 to 5     Submitted on the opposite strand 506/510
(99 %)
0 diff
(100 %id)
DA100538 cerebellum .a 2045 to 2632 2 to 589   tiling clone, capped   588/588
(100 %)
0 diff
(100 %id)
BF932901 nervous_tumor .a 2106 to 2475 395 to 25     Submitted on the opposite strand 371/395
(93 %)
10 diff
(97.5 %id)
BF933373 nervous_tumor .a 2106 to 2475 395 to 25     Submitted on the opposite strand 371/395
(93 %)
10 diff
(97.5 %id)
AJ713631 bone marrow .a 2673 to 2799 1 to 127   tiling clone,   127/127
(100 %)
0 diff
(100 %id)
AK025125 colon .a 2861 to 4914 1 to 2053   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 2053/2053
(100 %)
4 diff
(99.9 %id)
DA620491   .a 2879 to 3455 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA015899 adrenal gland .a 2918 to 3473 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DA872711 Prostate .a 2918 to 3486 2 to 570   capped   569/570
(99 %)
2 diff
(99.7 %id)
DA878379 Prostate .a 2918 to 3497 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
BC057236 Prostate .a 2919 to 4914 3 to 2003   tiling clone, available from MGC,   2008/2036
(98 %)
17 diff
(99.2 %id)
BU930510 Prostate .a 2919 to 3695 2 to 789   available from MGC,   795/799
(99 %)
19 diff
(97.7 %id)
TI_2194645753   .a 3203 to 4280 1176 to 112       1065/1271
(83 %)
17 diff
(98.7 %id)
TI_2194645755   .a 3209 to 4277 1170 to 114       1057/1267
(83 %)
14 diff
(98.9 %id)
DA463452   .a 3235 to 3788 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
TI_2194644188   .a 3241 to 4280 1139 to 110       1030/1257
(81 %)
13 diff
(99.0 %id)
TI_2194644189   .a 3248 to 4277 1136 to 118       1019/1264
(80 %)
13 diff
(99.0 %id)
DA468789   .a 3376 to 3938 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA307776 hippocampus .a 3474 to 4042 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
AB075819 brain .b 1 to 5783 1 to 5782 G504E tiling clone, available from KIAA,   5782/5782
(100 %)
5 diff
(100.0 %id)
DB259107 uterus .b 3679 to 4252 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BP326529 prostata .b 3765 to 4316 1 to 550       550/550
(100 %)
21 diff
(96.2 %id)
FN097239 breast carcinoma .b 3854 to 3954 103 to 1     Submitted on the opposite strand 103/103
(100 %)
5 diff
(95.2 %id)
BP343691 stomach mucosa .b 3867 to 4449 1 to 582   tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
GD149236   .b 4078 to 4221 149 to 7     Submitted on the opposite strand 143/149
(95 %)
0 diff
(100 %id)
BX110805 placenta .b 4177 to 4905 1 to 730       730/730
(100 %)
1 diff
(99.9 %id)
R78174 placenta .b 4177 to 4531 1 to 363       363/366
(99 %)
14 diff
(96.2 %id)
AU186080 skin .b 4367 to 5015 636 to 1     Submitted on the opposite strand 636/638
(99 %)
47 diff
(92.7 %id)
FN093704 breast carcinoma .b 4418 to 4520 101 to 1     Submitted on the opposite strand 101/101
(100 %)
5 diff
(95.1 %id)
BG570719 placenta .b 4448 to 5035 1 to 586       586/586
(100 %)
3 diff
(99.5 %id)
AA318526 Spleen .b 4495 to 4856 1 to 362       362/364
(99 %)
2 diff
(99.5 %id)
AI083524 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 4542 to 5018 478 to 2       477/478
(99 %)
0 diff
(100 %id)
BF921994 nervous_tumor .b 4562 to 4693 1 to 131       131/131
(100 %)
6 diff
(95.5 %id)
C17785 placenta .b 4631 to 5047 1 to 417       417/420
(99 %)
5 diff
(98.9 %id)
R77809 placenta .b 4730 to 5008 282 to 1       282/283
(99 %)
6 diff
(97.9 %id)
BF446914 Prostate .b 5200 to 5783 584 to 1       584/584
(100 %)
0 diff
(100 %id)
BG057685 blood, lymphocyte .b 5221 to 5778 559 to 2       558/559
(99 %)
0 diff
(100 %id)
AI290271 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 5252 to 5754 506 to 1       506/506
(100 %)
8 diff
(98.5 %id)
BQ378025 uterus .b 5282 to 5540 1 to 260       260/260
(100 %)
7 diff
(97.4 %id)
AW795715 uterus .b 5298 to 5540 1 to 243       243/243
(100 %)
8 diff
(96.8 %id)
BG413537 pooled .b 5304 to 5784 483 to 3       481/483
(99 %)
0 diff
(100 %id)
BU754430 placenta .b 5406 to 5783 396 to 19   AAA   378/378
(100 %)
0 diff
(100 %id)
GD137337   .b 5656 to 5783 7 to 134       128/149
(85 %)
2 diff
(98.7 %id)
GD137338   .b 5656 to 5783 7 to 134       128/149
(85 %)
2 diff
(98.7 %id)
AW016805   .b 5691 to 5788 116 to 19   tiling clone, AAA   98/108
(90 %)
0 diff
(100 %id)
TI_2194644181   .c 1 to 1064 85 to 1140       1056/1270
(83 %)
16 diff
(98.8 %id)
TI_2194645376   .c 1 to 1140 80 to 1195       1119/1292
(86 %)
30 diff
(97.7 %id)
BC144298 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .c 3 to 4172 1 to 4170 exact tiling clone,   4170/4170
(100 %)
3 diff
(100.0 %id)
BQ337343 marrow .c 151 to 587 449 to 13       437/449
(97 %)
0 diff
(100 %id)
BC144297 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .d 1 to 4124 1 to 4124 H452N tiling clone,   4124/4124
(100 %)
2 diff
(100.0 %id)
AK123747   .e 1 to 2680 2 to 2681 M89I Q124H tiling clone, available from FLJ,   2681/2681
(100 %)
5 diff
(99.9 %id)
DA602891   .e 1 to 574 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB319981   .e 2148 to 2680 533 to 1       533/533
(100 %)
2 diff
(99.7 %id)
DA672805   .f 1 to 594 2 to 596   tiling clone, capped   595/595
(100 %)
3 diff
(99.5 %id)
BI258773 cervical carcinoma cell line, cervix .f 343 to 1125 1 to 788   tiling clone,   788/788
(100 %)
7 diff
(99.2 %id)
BX647496 human colon endothel primary cell culture .g 1 to 2806 1 to 2804 D181F L182I Y183P P184N T185P ... tiling clone, available from DKFZ, AAA   2804/2804
(100 %)
3 diff
(99.9 %id)
AK128602 trachea .h 1 to 3453 1 to 3453 exact tiling clone, available from FLJ,   3453/3453
(100 %)
3 diff
(100.0 %id)
BQ012502 placenta .h 687 to 1162 492 to 17   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 476/492
(96 %)
0 diff
(100 %id)
BQ011330 placenta .h 934 to 1162 245 to 17   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 229/245
(93 %)
0 diff
(100 %id)
DW421053 Liver .h 1540 to 1821 298 to 17       282/298
(94 %)
0 diff
(100 %id)
GD159819   .h 2135 to 2247 119 to 8     Submitted on the opposite strand 112/123
(91 %)
0 diff
(100 %id)
DN995278 breast cancer, Mammary gland (cancer tissue) .i 1 to 765 1 to 764   tiling clone,   764/764
(100 %)
9 diff
(98.9 %id)
AI760818 2 pooled tumors (clear cell type), Kidney .i 766 to 1436 687 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 671/672
(99 %)
9 diff
(98.7 %id)
BX106818 2 pooled tumors (clear cell type), Kidney .i 772 to 1275 1 to 504   tiling clone,   504/504
(100 %)
0 diff
(100 %id)
AI769951 2 pooled tumors (clear cell type), Kidney .i 921 to 1437 542 to 26   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 517/517
(100 %)
8 diff
(98.5 %id)
GD159737   .i 1361 to 1436 1 to 73   tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 73/73
(100 %)
3 diff
(95.9 %id)
DR005703 Prostate .j 1 to 435 1 to 434 A34G N107K T108P S109A W110G ... tiling clone,   434/434
(100 %)
2 diff
(99.6 %id)
DA564304 heart .k 1 to 571 2 to 572   tiling clone, capped   571/571
(100 %)
1 diff
(99.9 %id)
DB266755 uterus .k 16 to 514 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
DB153221 thymus .k 44 to 619 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
BP327175 prostata .k 77 to 659 1 to 583   tiling clone,   583/583
(100 %)
0 diff
(100 %id)
DA317280 hippocampus .l 1 to 573 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB233834 trachea .l 1 to 590 2 to 591 exact tiling clone, capped   590/590
(100 %)
0 diff
(100 %id)
DB283874 uterus .l 1 to 548 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB285157 uterus .l 1 to 539 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA389439 thalamus .m 1 to 444 2 to 445   tiling clone, capped   444/444
(100 %)
0 diff
(100 %id)
BF898707 marrow .m 244 to 724 492 to 12   tiling clone, Submitted on the opposite strand 481/492
(97 %)
0 diff
(100 %id)
BF904690 marrow .m 338 to 636 1 to 299       299/299
(100 %)
2 diff
(99.4 %id)
AL597024   .n 1 to 553 1 to 553   tiling clone,   553/553
(100 %)
0 diff
(100 %id)
AL598105   .n 1 to 513 1 to 516       516/516
(100 %)
4 diff
(99.3 %id)
BI023663 marrow .n 430 to 801 1 to 374 exact tiling clone,   374/374
(100 %)
7 diff
(98.2 %id)
DA328895 hippocampus .o 1 to 551 2 to 552 exact tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
DA325703 hippocampus .p 1 to 607 2 to 609 G54S tiling clone, capped   608/608
(100 %)
2 diff
(99.7 %id)
DB287784 uterus .p 7 to 563 2 to 559   tiling clone, capped   558/558
(100 %)
2 diff
(99.7 %id)
AI638633 pooled germ cell tumors .q-u 1 to 563 575 to 13 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 563/563
(100 %)
0 diff
(100 %id)
BF897942 marrow .r-u 1 to 494 15 to 507 S6P Q7K S8V A9L I11L ... tiling clone,   493/507
(97 %)
6 diff
(98.9 %id)
BI031942 marrow .s-u 1 to 484 1 to 484 exact tiling clone,   484/484
(100 %)
7 diff
(98.6 %id)
BQ022087 placenta .t-u 1 to 410 427 to 18 F10C tiling clone, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 410/410
(100 %)
2 diff
(99.6 %id)
AV682889 hepatocellular carcinoma .u-u 1 to 382 1 to 375 V7D tiling clone,   375/402
(93 %)
12 diff
(97.1 %id)
AV715713   Gene ATP8B4, variant not shown         Suspected internal deletion, this clone was ignored    
DB312417 thalamus Gene ATP8B4, variant not shown         This clone was ignored    
DA407153 thalamus Gene ATP8B4, variant not shown       capped This clone was ignored    
GD159712   Gene ATP8B4, variant not shown         This clone was ignored    
DB230667 trachea Gene ATP8B4, variant not shown       capped This clone was ignored    
BI020087 marrow Gene ATP8B4, variant not shown              
DB304502 brain Gene ATP8B4, variant not shown         This clone was ignored    
DA212688 brain Gene ATP8B4, variant not shown       capped This clone was ignored    
DB229959 trachea Gene ATP8B4, variant not shown       capped This clone was ignored    
DB349951 trachea Gene ATP8B4, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q-u, .r-u, .s-u, .t-u, .u-u, .va-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C