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Gene ATP5ITABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
347 supporting clones for gene ATP5I back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BF215596 brain, glioblastoma .a -9 to 353 1 to 360 R15A Y16T S17P A18P L19C ... AAA   360/360
(100 %)
4 diff
(98.9 %id)
NM_007100.3   .a -8 to 361 1 to 370 exact RefSeq,   370/373
(99 %)
5 diff
(98.7 %id)
BP346950 brain .a -8 to 353 1 to 361 exact AAA   361/361
(100 %)
1 diff
(99.8 %id)
BG705142 brain, hippocampus .a 1 to 353 7 to 359 exact AAA   359/359
(100 %)
4 diff
(98.9 %id)
BG704851 brain, hippocampus .a 1 to 353 7 to 359 exact tiling clone, AAA   359/359
(100 %)
3 diff
(99.2 %id)
DB533727 hippocampus .a 1 to 355 4 to 358 A18P R56P   Submitted on the opposite strand 358/358
(100 %)
6 diff
(98.4 %id)
DB494253 hypothalamus .a 1 to 353 3 to 355 K49N AAA   355/355
(100 %)
4 diff
(98.9 %id)
DB565295 hypothalamus .a 1 to 353 3 to 355 exact AAA Submitted on the opposite strand 355/355
(100 %)
3 diff
(99.2 %id)
CD172903 embryonic stem cells, WA01, passage 38 .a 1 to 353 20 to 371 Y25C AAA   353/371
(95 %)
9 diff
(97.6 %id)
DB466830 hippocampus .a 1 to 355 1 to 355 A44E     355/355
(100 %)
2 diff
(99.5 %id)
DN992591 brain, whole brain .a 6 to 353 29 to 375 exact tiling clone, AAA   347/375
(92 %)
6 diff
(98.4 %id)
D50371 brain .a 20 to 355 1 to 336 exact     336/336
(100 %)
3 diff
(99.2 %id)
BU858880 mixed (pool of 40 RNAs) .a 25 to 354 1 to 330 Y25C     330/1262
(26 %)
4 diff
(99.7 %id)
BG778681 adenocarcinoma, Prostate .a 27 to 353 1 to 326 exact AAA   326/326
(100 %)
2 diff
(99.4 %id)
DW425137 Liver .a 28 to 296 18 to 286 exact     269/286
(94 %)
6 diff
(98.0 %id)
DW427599 Liver .a 28 to 288 18 to 278       261/278
(93 %)
8 diff
(97.2 %id)
BU533527 mixed (pool of 40 RNAs) .a 36 to 355 1 to 320 exact AAA   320/320
(100 %)
3 diff
(99.1 %id)
AB028624   .a 40 to 355 1 to 316 exact AAA   316/316
(100 %)
1 diff
(99.7 %id)
BU589175 mixed (pool of 40 RNAs) .a 40 to 355 1 to 316 exact AAA   316/316
(100 %)
4 diff
(98.8 %id)
BU533691 mixed (pool of 40 RNAs) .a 40 to 351 1 to 312 exact     312/962
(32 %)
4 diff
(99.6 %id)
BU565953 mixed (pool of 40 RNAs) .a 40 to 356 1 to 317 exact AAA   317/317
(100 %)
4 diff
(98.8 %id)
CN408420 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 41 to 353 1 to 313 exact AAA   313/313
(100 %)
0 diff
(100 %id)
DW408854 Liver .a 43 to 353 18 to 328 exact AAA   311/328
(94 %)
9 diff
(97.3 %id)
BU536029 mixed (pool of 40 RNAs) .a 46 to 353 1 to 308 exact AAA   308/308
(100 %)
2 diff
(99.4 %id)
DW412629 Liver .a 47 to 354 11 to 318 exact     308/323
(95 %)
9 diff
(97.3 %id)
DW433874 Liver .a 47 to 293 15 to 261 exact     247/261
(94 %)
7 diff
(97.4 %id)
AA654953   .a 47 to 310 1 to 264 P3A Y30*     264/264
(100 %)
4 diff
(98.5 %id)
BI859791 breast, mammary adenocarcinoma, cell line .a 47 to 353 1 to 308 V5G Q6A V7G S8L P9S ... AAA   308/308
(100 %)
1 diff
(99.7 %id)
TI_57189848   .a 47 to 354 55 to 363 V5G Q6A V7G S8L P9S ... AAA   309/672
(45 %)
2 diff
(99.8 %id)
TI_57190114   .a 47 to 353 57 to 363 exact AAA   307/307
(100 %)
1 diff
(99.7 %id)
BI860357 breast, mammary adenocarcinoma, cell line .a 48 to 353 1 to 306 exact AAA   306/306
(100 %)
1 diff
(99.7 %id)
BU532780 mixed (pool of 40 RNAs) .a 49 to 356 1 to 308 exact     308/312
(98 %)
4 diff
(98.8 %id)
BG944618 blood .a 50 to 353 1 to 304 exact AAA   304/304
(100 %)
1 diff
(99.7 %id)
BC105610 Pooled, 40 cell lines .a 50 to 353 1 to 304 exact AAA   304/304
(100 %)
2 diff
(99.4 %id)
DW415483 Liver .a 50 to 346 16 to 312 exact     297/312
(95 %)
10 diff
(96.8 %id)
CD172962 embryonic stem cells, WA01, passage 38 .a 51 to 355 27 to 331 V2L AAA   305/331
(92 %)
9 diff
(97.3 %id)
BU587282 mixed (pool of 40 RNAs) .a 51 to 356 1 to 305 exact     305/341
(89 %)
3 diff
(99.2 %id)
BU532665 mixed (pool of 40 RNAs) .a 51 to 353 1 to 303 exact     303/303
(100 %)
2 diff
(99.4 %id)
BU564562 mixed (pool of 40 RNAs) .a 51 to 357 1 to 307 exact     307/335
(91 %)
8 diff
(97.7 %id)
BU565846 mixed (pool of 40 RNAs) .a 51 to 351 1 to 301 exact     301/308
(97 %)
3 diff
(99.1 %id)
BU860969 mixed (pool of 40 RNAs) .a 51 to 356 1 to 306 exact     306/863
(35 %)
3 diff
(99.7 %id)
CA455630 mixed (pool of 40 RNAs) .a 51 to 353 1 to 303 exact AAA   303/303
(100 %)
2 diff
(99.4 %id)
CD299177 Blood vessels - aorta, basilar and artery .a 51 to 353 1 to 303 R42M AAA   303/303
(100 %)
3 diff
(99.1 %id)
BP319807 pericardium .a 51 to 353 1 to 303 exact AAA   303/303
(100 %)
0 diff
(100 %id)
AJ715071 bone marrow .a 52 to 353 8 to 309 exact AAA   302/309
(97 %)
6 diff
(98.1 %id)
BP214064 cerebrum .a 52 to 355 1 to 304 exact AAA   304/304
(100 %)
1 diff
(99.7 %id)
CD246676 embryonic stem cells, WA01, passage 38 .a 52 to 352 18 to 317 exact AAA   300/317
(94 %)
7 diff
(97.8 %id)
AA229611   .a 52 to 353 1 to 302 L21H AAA   302/302
(100 %)
5 diff
(98.4 %id)
CA971133 mixed (pool of 40 RNAs) .a 52 to 353 1 to 302 exact AAA   302/302
(100 %)
5 diff
(98.4 %id)
CB112659 Liver .a 52 to 355 1 to 304 exact AAA   304/304
(100 %)
2 diff
(99.4 %id)
CD174610 embryonic stem cells, WA01, passage 38 .a 53 to 353 23 to 325 V2S L21F AAA   303/325
(93 %)
7 diff
(97.9 %id)
BU531899 mixed (pool of 40 RNAs) .a 53 to 353 1 to 301 exact AAA   301/301
(100 %)
2 diff
(99.4 %id)
BU532336 mixed (pool of 40 RNAs) .a 53 to 352 1 to 300 exact     300/339
(88 %)
3 diff
(99.2 %id)
BU532601 mixed (pool of 40 RNAs) .a 53 to 356 1 to 304 exact     304/339
(89 %)
4 diff
(98.9 %id)
BU564344 mixed (pool of 40 RNAs) .a 53 to 353 1 to 301 A45S AAA   301/301
(100 %)
4 diff
(98.7 %id)
BU566756 mixed (pool of 40 RNAs) .a 53 to 352 1 to 300 exact     300/336
(89 %)
3 diff
(99.2 %id)
BU953427 mixed (pool of 40 RNAs) .a 53 to 356 1 to 304 exact     304/772
(39 %)
3 diff
(99.7 %id)
BU958153 mixed (pool of 40 RNAs) .a 53 to 353 1 to 301 exact AAA   301/301
(100 %)
3 diff
(99.1 %id)
AU099973   .a 53 to 351 1 to 299 Q6R V7A S8F K12T I57L ...     299/300
(99 %)
21 diff
(93.0 %id)
CD177578 embryonic trophoblasts, made from WA01 stemcells .a 54 to 355 21 to 322 exact AAA   302/322
(93 %)
7 diff
(97.9 %id)
BU589435 mixed (pool of 40 RNAs) .a 54 to 354 1 to 301 exact     301/371
(81 %)
2 diff
(99.5 %id)
BU565653 mixed (pool of 40 RNAs) .a 54 to 353 1 to 300 exact     300/306
(98 %)
2 diff
(99.4 %id)
BU954996 mixed (pool of 40 RNAs) .a 54 to 354 1 to 301 exact     301/338
(89 %)
3 diff
(99.2 %id)
CB107332 Liver .a 54 to 355 1 to 302 R59I E60* AAA   302/302
(100 %)
3 diff
(99.1 %id)
CB118484 Liver .a 54 to 353 1 to 300 exact AAA   300/300
(100 %)
0 diff
(100 %id)
CB116863 Liver .a 54 to 310 1 to 257 exact     257/257
(100 %)
1 diff
(99.7 %id)
BP305162   .a 54 to 353 1 to 300 exact AAA   300/300
(100 %)
0 diff
(100 %id)
BP316397 pericardium .a 54 to 353 1 to 300 exact AAA   300/300
(100 %)
2 diff
(99.4 %id)
BP318832 pericardium .a 54 to 353 1 to 300 exact AAA   300/300
(100 %)
0 diff
(100 %id)
BP329620 rectum .a 54 to 354 1 to 301 V5G E46Q     301/583
(51 %)
4 diff
(99.4 %id)
BP330576 rectum .a 54 to 353 1 to 300 exact AAA   300/300
(100 %)
0 diff
(100 %id)
BM746914 Ascites, stomach .a 54 to 355 1 to 301 exact AAA   301/301
(100 %)
1 diff
(99.7 %id)
BM770207 Ascites, stomach .a 54 to 355 1 to 302 exact AAA   302/302
(100 %)
0 diff
(100 %id)
BP377717 uterus .a 54 to 355 1 to 302 exact AAA   302/302
(100 %)
0 diff
(100 %id)
BF244532 brain, glioblastoma .a 55 to 350 1 to 296 exact AAA   296/296
(100 %)
1 diff
(99.7 %id)
BF216630 brain, glioblastoma .a 55 to 350 1 to 295 R15A Y16T S17P A18P L19C ... AAA   295/295
(100 %)
2 diff
(99.4 %id)
BF979141 melanotic melanoma, high MDR, skin .a 55 to 349 1 to 295 I57M A58P R59E E60N L61G ...     295/343
(86 %)
8 diff
(97.7 %id)
DA737481   .a 55 to 355 2 to 302 exact capped   301/301
(100 %)
0 diff
(100 %id)
BC003679 Kidney, hypernephroma .a 56 to 355 1 to 300 exact available from MGC, AAA   300/300
(100 %)
1 diff
(99.7 %id)
DW411807 Liver .a 56 to 353 18 to 315 K69Q     298/327
(91 %)
12 diff
(96.4 %id)
DW412849 Liver .a 56 to 353 19 to 316 exact     298/322
(92 %)
9 diff
(97.3 %id)
DW413612 Liver .a 56 to 353 18 to 315 K69Q     298/319
(93 %)
10 diff
(96.9 %id)
DW414590 Liver .a 56 to 352 11 to 307 exact     297/315
(94 %)
10 diff
(96.9 %id)
DW416699 Liver .a 56 to 346 18 to 308 L10R K69Q     291/308
(94 %)
11 diff
(96.5 %id)
DW432853 Liver .a 56 to 303 18 to 264 G26E A27P T28R R29A Y30T ...     247/264
(93 %)
9 diff
(96.6 %id)
DW437006 Liver .a 56 to 288 18 to 250       233/250
(93 %)
6 diff
(97.6 %id)
DW462465 Liver .a 56 to 353 18 to 315 Q6X AAA   298/315
(94 %)
6 diff
(98.1 %id)
BU588768 mixed (pool of 40 RNAs) .a 56 to 354 1 to 299 exact     299/335
(89 %)
3 diff
(99.2 %id)
BU566749 mixed (pool of 40 RNAs) .a 56 to 353 1 to 299 Q6L R15L Y16L S17L A18R ... AAA   299/299
(100 %)
5 diff
(98.4 %id)
CD357975 Pooled-Skin .a 56 to 354 1 to 300 A37S K49R     300/334
(89 %)
8 diff
(97.7 %id)
CD238160 Pituitary .a 57 to 351 1 to 295 exact AAA   295/295
(100 %)
0 diff
(100 %id)
BX331577 Neuroblastoma Cot 10-normalized .a 57 to 356 1 to 299 exact     299/299
(100 %)
5 diff
(98.4 %id)
DW413086 Liver .a 57 to 350 19 to 313 exact     295/321
(91 %)
10 diff
(96.9 %id)
BU588475 mixed (pool of 40 RNAs) .a 57 to 352 1 to 295 exact     295/332
(88 %)
4 diff
(98.8 %id)
BU532128 mixed (pool of 40 RNAs) .a 58 to 353 1 to 296 exact AAA   296/296
(100 %)
3 diff
(99.0 %id)
BU533597 mixed (pool of 40 RNAs) .a 58 to 355 1 to 298 exact AAA   298/298
(100 %)
3 diff
(99.0 %id)
BU566640 mixed (pool of 40 RNAs) .a 58 to 356 1 to 299 exact     299/339
(88 %)
4 diff
(98.9 %id)
BU928045 mixed (pool of 40 RNAs) .a 58 to 356 1 to 299 exact     299/386
(77 %)
4 diff
(99.0 %id)
BU954291 mixed (pool of 40 RNAs) .a 58 to 355 1 to 298 exact AAA   298/298
(100 %)
3 diff
(99.0 %id)
BU945161 mixed (pool of 40 RNAs) .a 58 to 352 1 to 295 exact AAA   295/295
(100 %)
3 diff
(99.0 %id)
DW462687 Liver .a 59 to 354 349 to 54 exact     296/366
(80 %)
0 diff
(100 %id)
BU595847 mixed (pool of 40 RNAs) .a 59 to 351 1 to 293 exact     293/330
(88 %)
4 diff
(98.8 %id)
BU537132 mixed (pool of 40 RNAs) .a 59 to 352 1 to 294 exact     294/330
(89 %)
5 diff
(98.5 %id)
BU537840 mixed (pool of 40 RNAs) .a 59 to 352 1 to 294 exact AAA   294/294
(100 %)
3 diff
(99.0 %id)
BU963789 mixed (pool of 40 RNAs) .a 59 to 351 1 to 293 exact     293/330
(88 %)
4 diff
(98.8 %id)
CB957724 Pooled-Glandular .a 59 to 355 1 to 297 exact     297/333
(89 %)
4 diff
(98.8 %id)
CK005023 brain/CNS, Human Brain - Frontal Cortex .a 59 to 355 1 to 297 exact AAA   297/297
(100 %)
3 diff
(99.0 %id)
TI_57214890   .a 59 to 353 29 to 323 exact AAA   295/323
(91 %)
7 diff
(97.9 %id)
AA364844 pineal body .a 60 to 336 1 to 277 R29X     277/277
(100 %)
0 diff
(100 %id)
DW414962 Liver .a 60 to 351 18 to 311 Q6H E46A E47R K48E K49E ...     294/314
(93 %)
8 diff
(97.5 %id)
DW415586 Liver .a 60 to 351 18 to 309 exact     292/312
(93 %)
7 diff
(97.8 %id)
DW416434 Liver .a 60 to 351 18 to 309 exact     292/309
(94 %)
7 diff
(97.8 %id)
DW439362 Liver .a 60 to 290 12 to 242       231/242
(95 %)
6 diff
(97.6 %id)
DW463480 Liver .a 60 to 157 18 to 115       98/115
(85 %)
8 diff
(93.1 %id)
DW463939 Liver .a 60 to 151 18 to 109       92/109
(84 %)
6 diff
(94.5 %id)
BI752813 brain .a 60 to 353 1 to 294 exact AAA   294/294
(100 %)
1 diff
(99.7 %id)
CB410475 maxilla, pooled .a 60 to 354 1 to 295 exact     295/295
(100 %)
1 diff
(99.7 %id)
BU599099 mixed (pool of 40 RNAs) .a 60 to 360 1 to 302 exact     302/329
(91 %)
10 diff
(97.0 %id)
BP315970 pericardium .a 60 to 355 1 to 296 exact AAA   296/296
(100 %)
0 diff
(100 %id)
BG944687 blood .a 61 to 357 1 to 297 E60G AAA   297/297
(100 %)
3 diff
(99.0 %id)
AV758155 bone marrow .a 61 to 353 73 to 365 exact AAA   293/365
(80 %)
8 diff
(97.9 %id)
AV716261   .a 61 to 355 1 to 295 E38D AAA   295/295
(100 %)
2 diff
(99.4 %id)
DW409726 Liver .a 61 to 351 19 to 309 exact AAA   291/309
(94 %)
6 diff
(98.1 %id)
DW415285 Liver .a 61 to 351 18 to 308 E38A     291/313
(92 %)
8 diff
(97.5 %id)
DW416275 Liver .a 61 to 351 18 to 308 exact     291/310
(93 %)
8 diff
(97.5 %id)
DW419429 Liver .a 61 to 346 18 to 303 exact     286/303
(94 %)
9 diff
(97.1 %id)
DW427049 Liver .a 61 to 323 18 to 280 Q51P K69Q     263/280
(93 %)
10 diff
(96.5 %id)
DW429172 Liver .a 61 to 316 18 to 273 P35T I67L L68F     256/273
(93 %)
10 diff
(96.4 %id)
DW431127 Liver .a 61 to 313 18 to 270 exact     253/270
(93 %)
6 diff
(97.8 %id)
DW438785 Liver .a 61 to 287 18 to 244       227/244
(93 %)
6 diff
(97.6 %id)
DW440220 Liver .a 61 to 282 18 to 239       222/239
(92 %)
12 diff
(95.0 %id)
DW464797 Liver .a 61 to 353 18 to 310 exact     293/362
(80 %)
7 diff
(98.1 %id)
CA335469 posterior tongue (pooled) .a 61 to 353 1 to 293 exact AAA   293/293
(100 %)
1 diff
(99.7 %id)
CA335801 anterior rhombomeres 1-4 (4 pooled) .a 61 to 353 1 to 293 exact AAA   293/293
(100 %)
1 diff
(99.7 %id)
CB857165 anterior tongue, pooled .a 61 to 353 1 to 293 E38G fully sequenced, AAA   293/293
(100 %)
2 diff
(99.4 %id)
BQ946310 leiomyosarcoma, uterus .a 61 to 355 1 to 295 exact AAA   295/295
(100 %)
0 diff
(100 %id)
AV760847 bone marrow .a 61 to 355 1 to 295 exact AAA   295/295
(100 %)
1 diff
(99.7 %id)
F19519 pectoral muscle (after mastectomy) .a 61 to 315 1 to 255 L13I     255/256
(99 %)
3 diff
(98.9 %id)
AA301789 aorta .a 62 to 355 1 to 295 exact     295/295
(100 %)
6 diff
(98.0 %id)
AV744371 cord Blood .a 62 to 353 43 to 334 K69N AAA   292/334
(87 %)
8 diff
(97.7 %id)
AV736594 cord Blood .a 62 to 353 47 to 338 exact AAA   292/338
(86 %)
7 diff
(98.0 %id)
AV744979 cord Blood .a 62 to 352 45 to 335 exact AAA   291/335
(86 %)
6 diff
(98.3 %id)
AV744306 cord Blood .a 62 to 352 45 to 333 L68*     289/342
(84 %)
10 diff
(97.1 %id)
AV738214 cord Blood .a 62 to 350 47 to 335 exact AAA   289/335
(86 %)
6 diff
(98.3 %id)
AL037646 brain .a 62 to 355 50 to 344 P3X AAA   295/344
(85 %)
6 diff
(98.3 %id)
DW426040 Liver .a 62 to 327 18 to 283 exact     266/283
(93 %)
6 diff
(97.9 %id)
DW434271 Liver .a 62 to 306 15 to 259 K69Q     245/259
(94 %)
7 diff
(97.3 %id)
DW442996 Liver .a 62 to 279 15 to 232       218/232
(93 %)
16 diff
(93.2 %id)
BU603708 mixed (pool of 40 RNAs) .a 62 to 352 1 to 291 exact AAA   291/291
(100 %)
1 diff
(99.7 %id)
BU954217 mixed (pool of 40 RNAs) .a 62 to 353 1 to 292 exact AAA   292/292
(100 %)
1 diff
(99.7 %id)
AV716704   .a 63 to 355 1 to 293 V2G AAA   293/293
(100 %)
3 diff
(99.0 %id)
BG940181 blood .a 64 to 355 1 to 292 exact AAA   292/292
(100 %)
2 diff
(99.4 %id)
BG943206 blood .a 64 to 330 1 to 267 R42K     267/267
(100 %)
2 diff
(99.3 %id)
BG943551 blood .a 64 to 356 1 to 293 K34E AAA   293/293
(100 %)
4 diff
(98.7 %id)
BG940879 blood .a 65 to 352 324 to 37 exact AAA   288/289
(99 %)
0 diff
(100 %id)
BG944916 blood .a 65 to 353 326 to 38 G26E AAA   289/290
(99 %)
3 diff
(99.0 %id)
BG231171 nasopharynx, normal epithelium .a 65 to 353 32 to 320 exact AAA   289/320
(90 %)
6 diff
(98.2 %id)
F24173 pectoral muscle (after mastectomy) .a 65 to 355 1 to 291 S66R     291/291
(100 %)
5 diff
(98.3 %id)
CD238024 Pituitary .a 66 to 353 1 to 287 V2C P3D P4G V5G Q6R ... AAA   287/287
(100 %)
7 diff
(97.6 %id)
AV682012 hepatocellular carcinoma .a 66 to 353 1 to 288 exact AAA   288/288
(100 %)
0 diff
(100 %id)
DW415309 Liver .a 67 to 352 16 to 302 Y25L G26R A27S T28H R29A ... AAA   287/302
(95 %)
9 diff
(97.1 %id)
DW422209 Liver .a 67 to 346 16 to 295 exact     280/295
(94 %)
9 diff
(97.0 %id)
DW439089 Liver .a 67 to 294 16 to 243 K69Q     228/243
(93 %)
7 diff
(97.2 %id)
BG230929 nasopharynx, normal epithelium .a 67 to 311 1 to 256 R15P Y16L S17T A18P L19P ...     256/256
(100 %)
15 diff
(94.2 %id)
F24939 pectoral muscle (after mastectomy) .a 68 to 356 1 to 289 exact     289/294
(98 %)
6 diff
(98.0 %id)
DW417704 Liver .a 70 to 354 14 to 298 exact     285/305
(93 %)
10 diff
(96.8 %id)
DW421310 Liver .a 70 to 354 14 to 298 exact     285/298
(95 %)
6 diff
(98.0 %id)
DW424858 Liver .a 70 to 343 14 to 287 D65G K69P     274/287
(95 %)
11 diff
(96.2 %id)
CD677560 eye, Trabecular meshwork .a 71 to 353 1 to 283 exact AAA   283/283
(100 %)
0 diff
(100 %id)
BU564472 mixed (pool of 40 RNAs) .a 71 to 353 1 to 283 exact     283/320
(88 %)
3 diff
(99.1 %id)
BU963488 mixed (pool of 40 RNAs) .a 71 to 353 1 to 283 K50R     283/320
(88 %)
4 diff
(98.8 %id)
CV574237 cornea, eye .a 71 to 355 1 to 285 exact AAA   285/285
(100 %)
0 diff
(100 %id)
BM921384 pooled brain, lung, testis .a 72 to 353 1 to 282 exact AAA   282/282
(100 %)
1 diff
(99.7 %id)
BG942402 blood .a 73 to 353 1 to 281 L10V Y16W F20V AAA   281/281
(100 %)
8 diff
(97.2 %id)
CN408426 embryonic stem cells, DMSO-treated H9 cellline .a 73 to 353 1 to 281 exact AAA   281/281
(100 %)
0 diff
(100 %id)
EC543840 Prostate .a 73 to 172 1 to 99       99/99
(100 %)
1 diff
(99.0 %id)
BG716136 brain, hypothalamus .a 73 to 353 1 to 288 V5D Q6A V7G S8L P9S ... AAA   286/288
(99 %)
12 diff
(95.9 %id)
CK904195 Islets of Langerhans, Pancreas .a 73 to 356 291 to 8 exact     284/302
(94 %)
0 diff
(100 %id)
CB152451 cervix, Uterine .a 74 to 356 1 to 283 V2E A45S E46D E47D     283/287
(98 %)
7 diff
(97.6 %id)
CD387554 embryonic trophoblasts, made from WA01 stemcells .a 74 to 355 19 to 299 exact AAA   281/299
(93 %)
6 diff
(98.0 %id)
BF214460 bone marrow, from acute myelogenous leukemia .a 74 to 344 1 to 269 R15A Y16T S17P A18P L19C ...     269/335
(80 %)
6 diff
(98.3 %id)
CK904196 Islets of Langerhans, Pancreas .a 74 to 355 1 to 282 exact AAA   282/282
(100 %)
0 diff
(100 %id)
BG952097 colon .a 75 to 354 1 to 282 P4R V5C Q6R V7S S8L ... AAA   280/282
(99 %)
13 diff
(95.4 %id)
BG959788 colon .a 75 to 310 1 to 235 V2C P3T P4G V5A Q6G ...     235/235
(100 %)
10 diff
(95.8 %id)
CN408422 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 75 to 353 1 to 279 exact AAA   279/279
(100 %)
0 diff
(100 %id)
EC463887 Prostate .a 75 to 173 1 to 99       99/104
(95 %)
4 diff
(96.2 %id)
AA484317 Kidney .a 75 to 353 291 to 13 Y25T I67T AAA   279/286
(97 %)
4 diff
(98.7 %id)
AV714092   .a 76 to 355 1 to 280 V5L AAA   280/280
(100 %)
3 diff
(99.0 %id)
EC574698 Prostate .a 76 to 172 13 to 115       103/115
(89 %)
12 diff
(89.6 %id)
H92426 eye, retina .a 76 to 353 305 to 28 exact AAA Submitted on the opposite strand 278/387
(71 %)
0 diff
(100 %id)
AA431836   .a 76 to 354 1 to 279 E38H K69E fully sequenced,   279/279
(100 %)
4 diff
(98.6 %id)
F17383 pectoral muscle (after mastectomy) .a 76 to 354 1 to 279 exact     279/279
(100 %)
1 diff
(99.7 %id)
F24109 pectoral muscle (after mastectomy) .a 76 to 350 15 to 288 P3H P4R V5C Q6R V7S ...     274/288
(95 %)
6 diff
(98.0 %id)
AK000656   .a 77 to 355 1 to 279 A24V available from FLJ, AAA   279/279
(100 %)
1 diff
(99.7 %id)
CB051078 Prostate .a 77 to 353 9 to 285 A18D AAA   277/285
(97 %)
7 diff
(97.6 %id)
F20283 pectoral muscle (after mastectomy) .a 77 to 354 1 to 278 Y25X     278/278
(100 %)
1 diff
(99.7 %id)
AA385387 thyroid gland .a 79 to 348 1 to 274 exact     274/281
(97 %)
10 diff
(96.5 %id)
BG951690 colon .a 79 to 334 1 to 254 P3H P4R V5C Q6R V7S ...     254/254
(100 %)
5 diff
(98.1 %id)
BP418480 small intestine .a 79 to 353 1 to 275 exact AAA Submitted on the opposite strand 275/275
(100 %)
0 diff
(100 %id)
AA188463   .a 80 to 149 1 to 70   fully sequenced,   70/70
(100 %)
0 diff
(100 %id)
AA552077 colon .a 81 to 356 277 to 2 exact     276/277
(99 %)
0 diff
(100 %id)
BE739540 hypernephroma, Kidney .a 82 to 304 223 to 1 K69Y     223/223
(100 %)
4 diff
(98.3 %id)
BT006922   .a 83 to 290 1 to 208       208/210
(99 %)
1 diff
(99.6 %id)
CV027310 mixed .a 83 to 297 1 to 215 exact     215/376
(57 %)
5 diff
(98.7 %id)
EC516657 Prostate .a 83 to 173 8 to 97       90/104
(86 %)
8 diff
(92.4 %id)
CN408425 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 84 to 353 1 to 270   AAA   270/270
(100 %)
0 diff
(100 %id)
CN408423 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 85 to 355 1 to 271   AAA   271/271
(100 %)
0 diff
(100 %id)
BM693179 eye, Retina Foveal and Macular .a 85 to 355 1 to 271   fully sequenced, AAA   271/271
(100 %)
0 diff
(100 %id)
AA935826 Kidney .a 86 to 355 270 to 1       270/270
(100 %)
0 diff
(100 %id)
AW772816 normal epithelium, thyroid .a 86 to 347 9 to 270     Submitted on the opposite strand 262/270
(97 %)
7 diff
(97.5 %id)
AA187337   .a 88 to 355 267 to 1   fully sequenced,   267/267
(100 %)
1 diff
(99.7 %id)
AA411634 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 88 to 139 1 to 52   fully sequenced,   52/52
(100 %)
4 diff
(92.4 %id)
AA505475 breast .a 90 to 354 265 to 1       265/265
(100 %)
0 diff
(100 %id)
AI720966 colon .a 90 to 353 264 to 1       264/293
(90 %)
0 diff
(100 %id)
BM021277 Islets of Langerhans, Pancreas .a 90 to 355 1 to 266   AAA   266/266
(100 %)
0 diff
(100 %id)
AW957321   .a 91 to 353 1 to 263   AAA   263/263
(100 %)
0 diff
(100 %id)
BF128935 B-cells, primary B-cells from tonsils (cell line) .a 91 to 353 1 to 263   fully sequenced,   263/263
(100 %)
2 diff
(99.3 %id)
AA308185 colon .a 92 to 355 1 to 264       264/264
(100 %)
0 diff
(100 %id)
CN408421 embryonic stem cells, DMSO-treated H9 cellline .a 92 to 353 1 to 262   AAA   262/262
(100 %)
0 diff
(100 %id)
AI224989 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 92 to 279 196 to 9       188/202
(93 %)
5 diff
(97.6 %id)
AW953372   .a 93 to 356 1 to 265       265/393
(67 %)
4 diff
(99.0 %id)
DW427854 Liver .a 93 to 353 9 to 269       261/277
(94 %)
9 diff
(96.8 %id)
AA320647 adipose tissue, white .a 95 to 306 1 to 213       213/213
(100 %)
6 diff
(97.2 %id)
AV721940 hypothalamus .a 95 to 353 1 to 259   AAA   259/259
(100 %)
0 diff
(100 %id)
AI140872 heart .a 95 to 356 269 to 9       261/269
(97 %)
1 diff
(99.7 %id)
CN408424 embryonic stem cells, DMSO-treated H9 cellline .a 100 to 355 1 to 256   AAA   256/256
(100 %)
0 diff
(100 %id)
AA729615 alveolar rhabdomyosarcoma .a 101 to 355 266 to 12   AAA   255/255
(100 %)
4 diff
(98.5 %id)
AA746763 alveolar rhabdomyosarcoma .a 101 to 355 265 to 12   AAA   254/255
(99 %)
6 diff
(97.7 %id)
AA352591   .a 102 to 353 1 to 252       252/252
(100 %)
0 diff
(100 %id)
AA505536 breast .a 104 to 354 251 to 1       251/251
(100 %)
0 diff
(100 %id)
AA737877 pooled germ cell tumors .a 104 to 355 252 to 1       252/252
(100 %)
1 diff
(99.7 %id)
AA913396 pooled .a 104 to 287 184 to 1       184/184
(100 %)
1 diff
(99.5 %id)
AA913850 pooled .a 104 to 355 269 to 18   AAA   252/252
(100 %)
1 diff
(99.7 %id)
AA936908 pooled germ cell tumors .a 104 to 353 251 to 1       251/251
(100 %)
2 diff
(99.3 %id)
AI081659 breast .a 104 to 355 252 to 1       252/252
(100 %)
1 diff
(99.7 %id)
AW024998 Kidney .a 104 to 356 254 to 2       253/254
(99 %)
0 diff
(100 %id)
W31741 parathyroid gland, parathyroid tumor .a 105 to 269 1 to 166   fully sequenced,   166/166
(100 %)
4 diff
(97.6 %id)
AA353193   .a 106 to 353 1 to 249       249/249
(100 %)
1 diff
(99.6 %id)
AI749192 colon .a 106 to 354 252 to 4       249/252
(98 %)
0 diff
(100 %id)
AW183987 pooled .a 106 to 356 256 to 6       251/256
(98 %)
0 diff
(100 %id)
AA863362 Kidney .a 107 to 353 267 to 22   AAA   246/246
(100 %)
1 diff
(99.6 %id)
AI620973 Prostate .a 107 to 353 247 to 1       247/247
(100 %)
0 diff
(100 %id)
BY797125 eye .a 108 to 354 1 to 247       247/247
(100 %)
0 diff
(100 %id)
AA514223 colon .a 108 to 356 253 to 5       249/253
(98 %)
0 diff
(100 %id)
AA923726 pooled .a 108 to 279 180 to 9       172/180
(95 %)
1 diff
(99.5 %id)
AA534308 colon .a 109 to 354 249 to 3       247/249
(99 %)
3 diff
(98.8 %id)
AW025393 Kidney .a 109 to 354 253 to 8       246/253
(97 %)
1 diff
(99.7 %id)
AI206102 Kidney .a 110 to 356 247 to 1       247/247
(100 %)
0 diff
(100 %id)
AA406595 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 111 to 356 246 to 1   fully sequenced,   246/246
(100 %)
0 diff
(100 %id)
F24201 pectoral muscle (after mastectomy) .a 114 to 356 1 to 243       243/244
(99 %)
1 diff
(99.6 %id)
BI018622 marrow .a 117 to 355 16 to 253   AAA   238/253
(94 %)
11 diff
(95.7 %id)
AI357163 pooled germ cell tumors .a 117 to 354 242 to 5       238/248
(95 %)
1 diff
(99.6 %id)
AI379642 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 117 to 331 134 to 348     Submitted on the opposite strand 215/348
(61 %)
6 diff
(98.3 %id)
BF222342 Prostate .a 117 to 353 237 to 1       237/242
(97 %)
2 diff
(99.2 %id)
AA746620 pooled germ cell tumors .a 119 to 355 238 to 1       238/238
(100 %)
0 diff
(100 %id)
AA933669 pooled germ cell tumors .a 119 to 355 238 to 1       238/238
(100 %)
0 diff
(100 %id)
BM021052 Islets of Langerhans, Pancreas .a 120 to 356 244 to 8       237/244
(97 %)
0 diff
(100 %id)
AI310754 2 pooled tumors (clear cell type), Kidney .a 124 to 353 253 to 24   AAA   230/230
(100 %)
8 diff
(96.6 %id)
FN090281 breast carcinoma .a 127 to 232 1 to 103       103/103
(100 %)
4 diff
(96.2 %id)
BE764691 nervous_tumor .a 128 to 334 207 to 1       207/207
(100 %)
5 diff
(97.6 %id)
AA973773 pooled germ cell tumors .a 128 to 353 236 to 11   AAA   226/226
(100 %)
0 diff
(100 %id)
BG943252 blood .a 132 to 355 287 to 64   AAA   224/224
(100 %)
7 diff
(96.9 %id)
CD638946 pooled .a 137 to 353 1 to 217   AAA   217/217
(100 %)
4 diff
(98.2 %id)
BF081821 amnion_normal .a 140 to 319 1 to 180       180/180
(100 %)
0 diff
(100 %id)
AW182543 pooled .a 140 to 287 148 to 1       148/148
(100 %)
3 diff
(98.0 %id)
AA568159 colon, colon tumor RER+ .a 142 to 353 212 to 1       212/212
(100 %)
3 diff
(98.6 %id)
W04646 parathyroid gland, parathyroid tumor .a 143 to 275 133 to 1   fully sequenced,   133/133
(100 %)
0 diff
(100 %id)
AA419110 ovarian tumor, ovary .a 143 to 347 1 to 205   fully sequenced,   205/205
(100 %)
1 diff
(99.6 %id)
AA431433   .a 143 to 354 214 to 3   fully sequenced,   212/214
(99 %)
0 diff
(100 %id)
AA583874 larynx .a 154 to 272 122 to 4       119/124
(95 %)
2 diff
(98.4 %id)
EC529020 Prostate .a 162 to 258 8 to 104       97/104
(93 %)
0 diff
(100 %id)
FN062167 breast carcinoma .a 165 to 261 100 to 1     Submitted on the opposite strand 100/100
(100 %)
6 diff
(94.0 %id)
BG108789 retina, Retinal Pigment Epithelium sheets .a 168 to 351 1 to 182   AAA   180/182
(98 %)
11 diff
(94.0 %id)
EC537846 Prostate .a 178 to 272 1 to 94       94/95
(98 %)
2 diff
(97.9 %id)
AF052490.
matches multiple genes
Liver .a 181 to 353 1 to 173     also hits gene RNF126 173/173
(100 %)
2 diff
(98.9 %id)
BG960652 colon .a 185 to 299 1 to 116       116/116
(100 %)
2 diff
(98.3 %id)
BG961012 colon .a 185 to 299 1 to 116       116/116
(100 %)
2 diff
(98.3 %id)
BG961677 colon .a 185 to 299 1 to 116       116/116
(100 %)
2 diff
(98.3 %id)
GW493473 diffuse (Lauren) gastric adenocarcinoma, stomach .a 188 to 355 8 to 175   AAA   168/175
(96 %)
6 diff
(96.6 %id)
N89555 cerebrum and cerebellum .a 188 to 352 1 to 165   AAA   165/165
(100 %)
2 diff
(98.8 %id)
EC443172 Prostate .a 189 to 272 19 to 102       84/102
(82 %)
6 diff
(94.2 %id)
AI040090   .a 189 to 355 191 to 25   AAA   167/167
(100 %)
3 diff
(98.3 %id)
AI312304 brain, oligodendroglioma .a 212 to 353 1 to 141   AAA Submitted on the opposite strand 141/141
(100 %)
7 diff
(95.1 %id)
AI284631 breast, invasive carcinoma .a 213 to 353 1 to 140   AAA   140/140
(100 %)
8 diff
(94.3 %id)
AI284838 breast, invasive carcinoma .a 213 to 353 1 to 140   AAA   140/140
(100 %)
8 diff
(94.3 %id)
FN047189 breast carcinoma .a 215 to 278 64 to 1     Submitted on the opposite strand 64/64
(100 %)
0 diff
(100 %id)
FN074875 breast carcinoma .a 215 to 272 64 to 7     Submitted on the opposite strand 58/64
(90 %)
2 diff
(96.9 %id)
R74226 breast .a 218 to 354 1 to 137       137/137
(100 %)
0 diff
(100 %id)
EC481100 Prostate .a 222 to 322 1 to 100       100/100
(100 %)
5 diff
(95.0 %id)
EC469592 Prostate .a 225 to 321 1 to 97       97/97
(100 %)
0 diff
(100 %id)
EC470266 Prostate .a 225 to 321 1 to 96       96/96
(100 %)
1 diff
(99.0 %id)
EC510252 Prostate .a 230 to 324 1 to 94       94/94
(100 %)
3 diff
(96.9 %id)
EC451014 Prostate .a 231 to 324 1 to 92       92/92
(100 %)
2 diff
(97.9 %id)
EC465333 Prostate .a 231 to 324 1 to 94       94/94
(100 %)
0 diff
(100 %id)
EC465682 Prostate .a 231 to 324 1 to 94       94/94
(100 %)
0 diff
(100 %id)
EC509546 Prostate .a 231 to 324 1 to 93       93/93
(100 %)
1 diff
(99.0 %id)
EC509639 Prostate .a 231 to 324 1 to 94       94/94
(100 %)
0 diff
(100 %id)
EC523439 Prostate .a 231 to 324 1 to 93       93/93
(100 %)
1 diff
(99.0 %id)
EC538055 Prostate .a 231 to 324 1 to 93       93/93
(100 %)
1 diff
(99.0 %id)
EC538507 Prostate .a 231 to 324 1 to 94       94/94
(100 %)
0 diff
(100 %id)
EC552309 Prostate .a 231 to 324 1 to 92       92/92
(100 %)
2 diff
(97.9 %id)
EC552896 Prostate .a 231 to 324 1 to 93       93/93
(100 %)
1 diff
(99.0 %id)
EC567188 Prostate .a 231 to 324 1 to 94       94/94
(100 %)
0 diff
(100 %id)
EC581644 Prostate .a 231 to 324 1 to 92       92/92
(100 %)
2 diff
(97.9 %id)
EC581814 Prostate .a 231 to 324 1 to 94       94/94
(100 %)
0 diff
(100 %id)
FN122029 breast carcinoma .a 231 to 326 1 to 92       92/92
(100 %)
8 diff
(91.4 %id)
BF057923 brain, oligodendroglioma .a 231 to 352 1 to 122       122/138
(88 %)
1 diff
(99.3 %id)
FN127605 breast carcinoma .a 232 to 323 1 to 90       90/93
(96 %)
4 diff
(95.7 %id)
EC485261 Prostate .a 240 to 322 21 to 102       82/102
(80 %)
7 diff
(93.2 %id)
AA419068 ovarian tumor, ovary .a 242 to 355 140 to 27   fully sequenced, AAA   114/114
(100 %)
0 diff
(100 %id)
CB857164 anterior tongue, pooled .a 242 to 353 156 to 45   fully sequenced, AAA   112/112
(100 %)
0 diff
(100 %id)
BM668408 eye, Retina Foveal and Macular .a 242 to 355 130 to 17   fully sequenced, AAA   114/114
(100 %)
0 diff
(100 %id)
BM854596 stomach .a 254 to 353 1 to 100   AAA   100/100
(100 %)
0 diff
(100 %id)
EC458249 Prostate .a 260 to 352 100 to 3       98/100
(98 %)
0 diff
(100 %id)
EC486105 Prostate .a 260 to 352 96 to 4       93/96
(96 %)
0 diff
(100 %id)
EC514265 Prostate .a 260 to 352 95 to 3       93/95
(97 %)
0 diff
(100 %id)
BF129589 B-cells, primary B-cells from tonsils (cell line) .a 278 to 353 80 to 1   fully sequenced,   80/80
(100 %)
11 diff
(86.3 %id)
DW436696 Liver .b 1 to 230 18 to 247 exact tiling clone,   234/251
(93 %)
6 diff
(97.7 %id)
DW444836 Liver .b 5 to 218 11 to 224 S55G     214/224
(95 %)
7 diff
(96.9 %id)
DW445472 Liver .b 5 to 215 11 to 221 D11H P29H S46*     211/221
(95 %)
10 diff
(95.5 %id)
DW447697 Liver .b 5 to 205 11 to 211 exact     201/211
(95 %)
6 diff
(97.2 %id)
BU588045 mixed (pool of 40 RNAs) .b 9 to 224 1 to 216 exact tiling clone, AAA   216/216
(100 %)
2 diff
(99.1 %id)
DW459680 Liver .b 12 to 140 17 to 145       129/145
(88 %)
7 diff
(95.2 %id)
DW443902 Liver .b 14 to 224 18 to 228       211/228
(92 %)
8 diff
(96.5 %id)
DW447289 Liver .b 14 to 209 18 to 213       196/213
(92 %)
7 diff
(96.8 %id)
DW447198 Liver .b 19 to 214 18 to 214       197/214
(92 %)
9 diff
(95.8 %id)
DW460655 Liver .b 19 to 137 18 to 136       119/136
(87 %)
7 diff
(94.9 %id)
DW447056 Liver .b 20 to 219 15 to 214       200/214
(93 %)
6 diff
(97.2 %id)
DW447706 Liver .b 20 to 213 18 to 211       194/211
(91 %)
8 diff
(96.3 %id)
EC489820 Prostate .b 48 to 155 1 to 108       108/108
(100 %)
1 diff
(99.1 %id)
EC525962 Prostate .b 48 to 155 1 to 108       108/108
(100 %)
0 diff
(100 %id)
AA303971 aorta .b 49 to 219 1 to 171       171/171
(100 %)
2 diff
(98.9 %id)
F27960 pectoral muscle (after mastectomy) .b 54 to 207 1 to 154       154/154
(100 %)
1 diff
(99.4 %id)
EC477687 Prostate .b 55 to 161 105 to 1       105/105
(100 %)
2 diff
(98.1 %id)
NR_033743.1   .c -8 to 306 1 to 315 exact RefSeq,   315/318
(99 %)
5 diff
(98.5 %id)
DA119852 cerebellum .c 1 to 298 2 to 299 exact tiling clone, capped, AAA   298/298
(100 %)
0 diff
(100 %id)
BU536903 mixed (pool of 40 RNAs) .c 49 to 298 1 to 250 exact AAA   250/250
(100 %)
1 diff
(99.6 %id)
CD511726 Blood vessels - aorta, basilar and artery .c 59 to 299 1 to 241       241/277
(87 %)
3 diff
(99.0 %id)
BF216615 brain, glioblastoma .c 61 to 295 1 to 236       236/583
(40 %)
2 diff
(99.7 %id)
AL037267 brain .c 62 to 298 252 to 16   AAA   237/240
(98 %)
0 diff
(100 %id)
AW089790 ovary, tumor, 5 pooled (see description) .c 63 to 301 244 to 6       239/244
(97 %)
0 diff
(100 %id)
AI143261 heart .c 104 to 300 212 to 16   AAA   197/197
(100 %)
0 diff
(100 %id)
BM722116 eye, fetal eye .d-u 1 to 548 1 to 548   tiling clone, fully sequenced,   548/548
(100 %)
1 diff
(99.9 %id)
BE172816 head_neck .d-u 276 to 559 289 to 6     Submitted on the opposite strand 284/289
(98 %)
0 diff
(100 %id)
BE172123 head_neck .d-u 279 to 563 17 to 301       285/305
(93 %)
4 diff
(98.7 %id)
BQ301312 bocio_tumor .d-u 290 to 517 250 to 21       230/250
(92 %)
0 diff
(100 %id)
BM678700 eye, fetal eye .d-u 518 to 1209 692 to 1 exact tiling clone, fully sequenced,   692/692
(100 %)
1 diff
(99.9 %id)
DB342383 thymus .d-u 872 to 1376 505 to 1       505/505
(100 %)
1 diff
(99.9 %id)
BM768749 stomach .d-u 884 to 1369 1 to 486       486/486
(100 %)
0 diff
(100 %id)
BM855625 stomach .d-u 884 to 1376 1 to 493   tiling clone, AAA   493/493
(100 %)
0 diff
(100 %id)
BC017215 Uterus, leiomyosarcoma .e 1 to 495 1 to 495 exact tiling clone, available from MGC, AAA   495/495
(100 %)
0 diff
(100 %id)
BE925618 amnion_normal .e 191 to 358 1 to 167       167/167
(100 %)
2 diff
(98.9 %id)
AA426364   .f 1 to 393 401 to 9 P36A tiling clone,   393/401
(98 %)
1 diff
(99.8 %id)
AA359518 lung .f 30 to 312 1 to 283       283/283
(100 %)
0 diff
(100 %id)
AW959310   .f 31 to 390 1 to 360   tiling clone, AAA   360/360
(100 %)
3 diff
(99.2 %id)
AW009735 colon .f 79 to 393 317 to 3   tiling clone,   315/317
(99 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes