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Gene ATP5A1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
480 representative clones for gene ATP5A1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001001937.1   .a 1 to 1950 1 to 1950 exact RefSeq,   1950/1950
(100 %)
5 diff
(99.8 %id)
BM479312 eye, retinoblastoma .a 95 to 1041 1 to 953       953/1001
(95 %)
17 diff
(98.4 %id)
BM475442 eye, retinoblastoma .a 95 to 1097 1 to 1018       1018/1058
(96 %)
29 diff
(97.3 %id)
BM802046 eye, retinoblastoma .a 95 to 927 1 to 842       842/1153
(73 %)
22 diff
(98.1 %id)
BU164559 large cell carcinoma, lung .a 95 to 929 1 to 842       842/843
(99 %)
16 diff
(98.2 %id)
BU193064 eye, retinoblastoma .a 95 to 1030 1 to 936       936/943
(99 %)
22 diff
(97.7 %id)
BU159634 eye, retinoblastoma .a 95 to 1020 1 to 929   tiling clone,   929/930
(99 %)
5 diff
(99.5 %id)
BU161708 eye, retinoblastoma .a 96 to 942 1 to 854       854/910
(93 %)
23 diff
(97.5 %id)
BU173464 eye, retinoblastoma .a 96 to 943 1 to 856       856/963
(88 %)
19 diff
(98.1 %id)
AU143516   .a 96 to 923 2 to 828   capped   827/827
(100 %)
5 diff
(99.4 %id)
CR617880 adult brain .a 97 to 1923 1 to 1827 exact     1827/1827
(100 %)
0 diff
(100 %id)
TI_59391934   .a 97 to 829 89 to 826       738/877
(84 %)
19 diff
(97.9 %id)
AU143150   .a 97 to 940 2 to 847   capped   846/848
(99 %)
13 diff
(98.5 %id)
CR590562 B cells (Ramos cell line) .a 98 to 1923 1 to 1826 exact     1826/1826
(100 %)
0 diff
(100 %id)
CR590601 fetal brain .a 98 to 1906 1 to 1809 exact     1809/1809
(100 %)
0 diff
(100 %id)
CR591138 fetal brain .a 98 to 1912 1 to 1815 exact     1815/1815
(100 %)
0 diff
(100 %id)
CR597489 T cells (Jurkat cell line) .a 98 to 1939 1 to 1842 exact     1842/1842
(100 %)
0 diff
(100 %id)
CR599938 adult brain .a 98 to 1926 1 to 1829 exact     1829/1829
(100 %)
0 diff
(100 %id)
CR601229 fetal brain .a 98 to 1926 1 to 1829 exact     1829/1829
(100 %)
0 diff
(100 %id)
CR604007 fetal liver .a 98 to 1911 1 to 1814 exact     1814/1814
(100 %)
0 diff
(100 %id)
CR604077 adult brain .a 98 to 1936 1 to 1839 exact     1839/1839
(100 %)
0 diff
(100 %id)
CR609069 placenta .a 98 to 1920 1 to 1823 exact     1823/1823
(100 %)
0 diff
(100 %id)
CR609904 fetal brain .a 98 to 1924 1 to 1827 exact     1827/1827
(100 %)
0 diff
(100 %id)
CR609973 fetal liver .a 98 to 1908 1 to 1811 exact     1811/1811
(100 %)
0 diff
(100 %id)
CR617331 neuroblastoma .a 98 to 1911 1 to 1814 exact     1814/1814
(100 %)
0 diff
(100 %id)
CR622375 B cells (Ramos cell line) .a 98 to 1926 1 to 1829 exact     1829/1829
(100 %)
0 diff
(100 %id)
CR626813 adult brain .a 98 to 1924 1 to 1827 exact     1827/1827
(100 %)
0 diff
(100 %id)
BX414552 thymus .a 98 to 1032 10 to 934   fully sequenced,   925/925
(100 %)
26 diff
(97.2 %id)
AL541039 placenta .a 98 to 1017 1 to 916   fully sequenced,   916/916
(100 %)
3 diff
(99.7 %id)
AL559997 B cells (Ramos cell line), B cells from Burkitt lymphoma .a 98 to 1079 1 to 982   fully sequenced,   982/982
(100 %)
0 diff
(100 %id)
BM451724 eye, retinoblastoma .a 99 to 1034 1 to 942       942/1027
(91 %)
26 diff
(97.5 %id)
BQ050584 leiomyosarcoma, uterus .a 99 to 1014 1 to 923       923/1003
(92 %)
16 diff
(98.5 %id)
BQ049553 lymph, lymphoma, cell line .a 99 to 1035 1 to 938       938/945
(99 %)
14 diff
(98.6 %id)
TI_159678133   .a 99 to 1178 44 to 1105       1064/1095
(97 %)
29 diff
(97.4 %id)
BU176607 eye, retinoblastoma .a 100 to 1014 1 to 928       928/929
(99 %)
19 diff
(98.0 %id)
BU165533 eye, retinoblastoma .a 100 to 1020 1 to 924       924/924
(100 %)
28 diff
(97.0 %id)
BU162101 eye, retinoblastoma .a 100 to 987 1 to 890       890/891
(99 %)
15 diff
(98.4 %id)
CR608051 T cells (Jurkat cell line) Cot10-normalized .a 101 to 1916 1 to 1816 exact     1816/1816
(100 %)
0 diff
(100 %id)
CR610155 fetal brain .a 101 to 1925 1 to 1825 exact     1825/1825
(100 %)
0 diff
(100 %id)
CR625409 neuroblastoma .a 101 to 1893 1 to 1793 exact     1793/1793
(100 %)
0 diff
(100 %id)
BX457086 thymus .a 101 to 944 10 to 854   fully sequenced,   845/845
(100 %)
6 diff
(99.3 %id)
BM558030 astrocytoma grade IV, cell line, brain .a 101 to 1005 1 to 915       915/1037
(88 %)
13 diff
(98.8 %id)
FN151160 breast carcinoma .a 102 to 196 96 to 4     Submitted on the opposite strand 93/98
(94 %)
0 diff
(100 %id)
BQ068732 brain, neuroblastoma, cell line .a 102 to 1014 1 to 921       921/998
(92 %)
8 diff
(99.2 %id)
BQ061206 lymph, lymphoma, cell line .a 102 to 1046 1 to 952       952/1014
(93 %)
28 diff
(97.3 %id)
BU845898 ovary, teratocarcinoma, cell line .a 102 to 996 1 to 898       898/911
(98 %)
9 diff
(99.1 %id)
TI_59383342   .a 102 to 629 106 to 644       539/586
(91 %)
19 diff
(96.8 %id)
BM903892 eye, retinoblastoma .a 103 to 1026 1 to 929       929/962
(96 %)
14 diff
(98.6 %id)
BM807204 lymph, lymphoma, cell line .a 103 to 1097 1 to 1001       1001/1032
(96 %)
23 diff
(97.8 %id)
CR607960 Placenta Cot 25-normalized .a 104 to 1906 1 to 1803 exact     1803/1803
(100 %)
0 diff
(100 %id)
BC007607 Eye, retinoblastoma .a 104 to 1939 1874 to 39 exact AAA Submitted on the opposite strand 1836/2706
(67 %)
0 diff
(100 %id)
BC028335 Breast, mammary adenocarcinoma. .a 104 to 1941 1 to 1838 exact available from MGC, AAA   1838/1838
(100 %)
1 diff
(100.0 %id)
AU143513   .a 104 to 936 2 to 832   capped   831/831
(100 %)
11 diff
(98.7 %id)
BM462115 eye, retinoblastoma .a 105 to 1097 1 to 997       997/1089
(91 %)
25 diff
(97.8 %id)
BM462266 eye, retinoblastoma .a 105 to 1079 1 to 983       983/1085
(90 %)
28 diff
(97.5 %id)
BM480110 eye, retinoblastoma .a 105 to 1095 1 to 995       995/1120
(88 %)
20 diff
(98.3 %id)
BM461546 eye, retinoblastoma .a 105 to 1062 1 to 968       968/1000
(96 %)
20 diff
(98.0 %id)
BM460443 eye, retinoblastoma .a 105 to 1057 1 to 958       958/1087
(88 %)
36 diff
(96.7 %id)
BM450094 melanotic melanoma, skin .a 105 to 1021 1 to 932       932/1063
(87 %)
20 diff
(98.2 %id)
BM558872 eye, retinoblastoma .a 105 to 1095 1 to 1002       1002/1025
(97 %)
20 diff
(98.1 %id)
BM474296 eye, retinoblastoma .a 105 to 1035 1 to 931       931/1023
(91 %)
20 diff
(98.1 %id)
BM799777 eye, retinoblastoma .a 106 to 1045 1 to 950       950/1099
(86 %)
22 diff
(98.0 %id)
BM452380 eye, retinoblastoma .a 106 to 1076 1 to 981       981/1034
(94 %)
39 diff
(96.3 %id)
BM799475 eye, retinoblastoma .a 106 to 1021 1 to 927       927/1108
(83 %)
21 diff
(98.2 %id)
BM799670 eye, retinoblastoma .a 106 to 1094 1 to 1001       1001/1107
(90 %)
19 diff
(98.3 %id)
BM904388 lymph, lymphoma, cell line .a 106 to 1072 1 to 980       980/1035
(94 %)
32 diff
(97.0 %id)
BM461654 eye, retinoblastoma .a 106 to 1035 1 to 937       937/1044
(89 %)
16 diff
(98.5 %id)
BQ058865 lymph, lymphoma, cell line .a 106 to 1096 1 to 992       992/1037
(95 %)
12 diff
(98.9 %id)
BU154358 eye, retinoblastoma .a 106 to 996 1 to 900       900/903
(99 %)
17 diff
(98.2 %id)
BU838529 dorsal root ganglia .a 106 to 1000 1 to 894       894/904
(98 %)
12 diff
(98.7 %id)
CX865944 embryonic stem .a 106 to 767 1 to 662       662/662
(100 %)
0 diff
(100 %id)
CX867846 embryonic stem .a 106 to 828 1 to 723       723/723
(100 %)
0 diff
(100 %id)
BM475975 eye, retinoblastoma .a 107 to 1097 1 to 1005       1005/1071
(93 %)
29 diff
(97.3 %id)
BU159673 eye, retinoblastoma .a 107 to 1014 1 to 911       911/916
(99 %)
13 diff
(98.6 %id)
BM462083 eye, retinoblastoma .a 109 to 1097 1 to 998       998/1137
(87 %)
30 diff
(97.4 %id)
BM451775 eye, retinoblastoma .a 109 to 1020 1 to 928       928/1036
(89 %)
23 diff
(97.8 %id)
BM564426 duodenal adenocarcinoma, cell line, small intestine .a 109 to 1035 1 to 934       934/1014
(92 %)
20 diff
(98.1 %id)
BU553611 ovary, teratocarcinoma, cell line .a 109 to 999 1 to 899       899/899
(100 %)
16 diff
(98.3 %id)
BM799916 eye, retinoblastoma .a 110 to 1097 1 to 994       994/1100
(90 %)
30 diff
(97.3 %id)
BM799459 eye, retinoblastoma .a 110 to 1097 1 to 998       998/1078
(92 %)
25 diff
(97.7 %id)
BU074168 insulinoma, Pancreas .a 110 to 736 1 to 627     Submitted on the opposite strand 627/627
(100 %)
0 diff
(100 %id)
BU509443 leiomyosarcoma, uterus .a 110 to 1026 1 to 919       919/923
(99 %)
16 diff
(98.3 %id)
BC042694 Eye, retinoblastoma .a 111 to 1939 1 to 1829 E298Q available from MGC, AAA   1829/1829
(100 %)
1 diff
(100.0 %id)
BM462042 eye, retinoblastoma .a 111 to 1094 1 to 990       990/1084
(91 %)
50 diff
(95.4 %id)
BU844917 ovary, teratocarcinoma, cell line .a 111 to 1021 1 to 919       919/927
(99 %)
15 diff
(98.4 %id)
CR611390 neuroblastoma .a 112 to 1915 1 to 1804 exact     1804/1804
(100 %)
0 diff
(100 %id)
BM451062 eye, retinoblastoma .a 112 to 1000 1 to 896       893/915
(97 %)
28 diff
(97.0 %id)
BM460433 eye, retinoblastoma .a 112 to 1053 1 to 953       953/1020
(93 %)
28 diff
(97.3 %id)
CR593595 fetal liver .a 113 to 1918 1 to 1806 exact     1806/1806
(100 %)
0 diff
(100 %id)
CR594700 T cells (Jurkat cell line) .a 113 to 1927 1 to 1815 exact     1815/1815
(100 %)
0 diff
(100 %id)
BX447778 T cells (Jurkat cell line) .a 113 to 984 1 to 865   fully sequenced,   865/865
(100 %)
0 diff
(100 %id)
BM472044 eye, retinoblastoma .a 113 to 1038 1 to 936       936/1020
(91 %)
18 diff
(98.3 %id)
BU173207 eye, retinoblastoma .a 113 to 1005 1 to 914       910/914
(99 %)
27 diff
(97.1 %id)
BM799583 eye, retinoblastoma .a 114 to 1035 1 to 931       933/1096
(85 %)
20 diff
(98.2 %id)
BU540701 large cell carcinoma, lung .a 114 to 1011 1 to 907       907/907
(100 %)
12 diff
(98.7 %id)
BU170362 eye, retinoblastoma .a 116 to 1035 1 to 922       922/934
(98 %)
15 diff
(98.4 %id)
AU143443   .a 116 to 940 2 to 823   capped   822/823
(99 %)
9 diff
(99.0 %id)
BM451312 eye, retinoblastoma .a 119 to 1045 1 to 932       932/1007
(92 %)
17 diff
(98.4 %id)
BM915629 amelanotic melanoma, cell line, skin .a 121 to 1097 1 to 986       986/1011
(97 %)
14 diff
(98.7 %id)
BU187296 eye, retinoblastoma .a 122 to 1020 1 to 901       901/903
(99 %)
10 diff
(98.9 %id)
BM456057 lymph, lymphoma, cell line .a 124 to 1044 1 to 924       924/1128
(81 %)
20 diff
(98.3 %id)
BM460426 eye, retinoblastoma .a 124 to 1079 1 to 961       960/1026
(93 %)
43 diff
(95.9 %id)
BM559016 eye, retinoblastoma .a 124 to 1097 1 to 979       979/1018
(96 %)
13 diff
(98.8 %id)
BQ226674 melanotic melanoma, skin .a 125 to 1003 1 to 888       888/889
(99 %)
12 diff
(98.7 %id)
BU189600 eye, retinoblastoma .a 125 to 1048 1 to 928       928/930
(99 %)
19 diff
(98.0 %id)
BQ945771 leiomyosarcoma, uterus .a 125 to 1010 1 to 892       892/893
(99 %)
10 diff
(98.9 %id)
BM476093 eye, retinoblastoma .a 126 to 1097 1 to 983       983/1080
(91 %)
28 diff
(97.5 %id)
CR604755 T cells (Jurkat cell line) .a 127 to 1893 1 to 1767 exact     1767/1767
(100 %)
0 diff
(100 %id)
BU159617 eye, retinoblastoma .a 131 to 1030 1 to 903       903/904
(99 %)
24 diff
(97.4 %id)
X65460   .a 132 to 1940 1 to 1809 exact tiling clone,   1809/1809
(100 %)
3 diff
(99.9 %id)
BM465971 eye, retinoblastoma .a 133 to 1039 1 to 919       919/956
(96 %)
25 diff
(97.4 %id)
FN146344 breast carcinoma .a 134 to 233 103 to 5     Submitted on the opposite strand 99/103
(96 %)
1 diff
(99.1 %id)
BM423534 amelanotic melanoma, cell line, skin .a 135 to 1068 1 to 950       950/1071
(88 %)
23 diff
(97.9 %id)
BM915648 amelanotic melanoma, cell line, skin .a 136 to 1044 1 to 917       917/1042
(88 %)
19 diff
(98.2 %id)
CR617088 T cells (Jurkat cell line) Cot10-normalized .a 139 to 1907 1 to 1769 exact     1769/1769
(100 %)
0 diff
(100 %id)
AL557938 T cells from T cell leukemia .a 139 to 1036 1 to 898   fully sequenced,   898/898
(100 %)
0 diff
(100 %id)
BM479278 eye, retinoblastoma .a 139 to 1095 1 to 970       970/1064
(91 %)
21 diff
(98.1 %id)
BT007209   .a 146 to 1806 1 to 1661       1661/1662
(99 %)
1 diff
(100.0 %id)
AU142554   .a 146 to 942 2 to 799   capped   798/827
(96 %)
10 diff
(98.8 %id)
BU193318 eye, retinoblastoma .a 149 to 1046 1 to 905       905/912
(99 %)
24 diff
(97.4 %id)
CR591462 T cells (Jurkat cell line) .a 155 to 1922 1 to 1768       1768/1768
(100 %)
0 diff
(100 %id)
FN055987 breast carcinoma .a 167 to 271 105 to 1     Submitted on the opposite strand 105/105
(100 %)
0 diff
(100 %id)
BM454974 leiomyosarcoma, uterus .a 206 to 1191 1 to 990       990/1080
(91 %)
17 diff
(98.5 %id)
BQ647847 hepatocellular carcinoma, cell line, Liver .a 230 to 1140 1 to 921       921/927
(99 %)
22 diff
(97.7 %id)
BM480178 eye, retinoblastoma .a 267 to 1191 1 to 933       933/1123
(83 %)
17 diff
(98.5 %id)
BM472033 eye, retinoblastoma .a 289 to 1203 1 to 922       922/1025
(89 %)
23 diff
(97.8 %id)
FN085203 breast carcinoma .a 308 to 407 94 to 1     Submitted on the opposite strand 94/94
(100 %)
7 diff
(92.6 %id)
BM799856 eye, retinoblastoma .a 324 to 1194 1 to 873       873/1091
(80 %)
23 diff
(97.9 %id)
BQ953590 eye, normal pigmented retinal epithelium .a 330 to 1227 1 to 903       903/927
(97 %)
9 diff
(99.1 %id)
BU170338 eye, retinoblastoma .a 336 to 1193 1 to 860       860/906
(94 %)
5 diff
(99.5 %id)
BQ918308 large cell carcinoma, lung .a 342 to 1234 1 to 900       900/902
(99 %)
16 diff
(98.3 %id)
BM462119 eye, retinoblastoma .a 357 to 1329 1 to 978       978/1100
(88 %)
38 diff
(96.6 %id)
CR625663 fetal brain .a 360 to 1918 1 to 1559       1559/1559
(100 %)
0 diff
(100 %id)
BU173140 eye, retinoblastoma .a 368 to 1203 1 to 845       845/884
(95 %)
23 diff
(97.4 %id)
BM557167 melanotic melanoma, skin .a 373 to 1377 1 to 1008       1008/1012
(99 %)
21 diff
(98.0 %id)
BU187645 eye, retinoblastoma .a 385 to 1244 1 to 864       864/864
(100 %)
4 diff
(99.6 %id)
BU902541 leiomyosarcoma, uterus .a 387 to 1271 1 to 895       895/899
(99 %)
16 diff
(98.3 %id)
CF552356 Pooled muscle (cardiac and skeletal) .a 387 to 1230 1 to 844       844/865
(97 %)
6 diff
(99.4 %id)
BU173218 eye, retinoblastoma .a 393 to 1269 1 to 876       876/877
(99 %)
13 diff
(98.6 %id)
BM471620 eye, retinoblastoma .a 409 to 1276 1 to 874       874/1072
(81 %)
16 diff
(98.6 %id)
BQ671121 epidermoid carcinoma, cell line, salivary gland .a 409 to 1263 1 to 859       859/884
(97 %)
14 diff
(98.5 %id)
CD106774 brain, Pituitary .a 409 to 1281 1 to 879       879/879
(100 %)
10 diff
(98.9 %id)
BQ440007 eye, retinoblastoma .a 410 to 1279 1 to 880       880/880
(100 %)
13 diff
(98.6 %id)
BM451349 eye, retinoblastoma .a 457 to 1317 1 to 872       872/1051
(82 %)
10 diff
(99.1 %id)
CD251541 brain, Pituitary .a 528 to 1368 1 to 846       846/846
(100 %)
8 diff
(99.1 %id)
BU184528 eye, retinoblastoma .a 531 to 1457 1 to 929       929/929
(100 %)
13 diff
(98.7 %id)
CX781865 human embryonic stem cells .a 537 to 1391 1 to 855       855/855
(100 %)
0 diff
(100 %id)
BU165378 eye, retinoblastoma .a 538 to 1377 1 to 844       844/904
(93 %)
14 diff
(98.5 %id)
BQ891834 eye, retinoblastoma .a 551 to 1425 1 to 886       886/902
(98 %)
18 diff
(98.1 %id)
BM903786 eye, retinoblastoma .a 553 to 1389 1 to 844       844/1004
(84 %)
11 diff
(99.0 %id)
BU182096 eye, retinoblastoma .a 553 to 1432 1 to 890       890/905
(98 %)
19 diff
(98.0 %id)
BU182241 eye, retinoblastoma .a 554 to 1412 1 to 872       872/899
(96 %)
18 diff
(98.0 %id)
BU170408 eye, retinoblastoma .a 555 to 1426 1 to 882       882/885
(99 %)
20 diff
(97.8 %id)
BM462255 eye, retinoblastoma .a 570 to 1433 1 to 867       867/1124
(77 %)
19 diff
(98.4 %id)
BM559273 eye, retinoblastoma .a 581 to 1527 1 to 965       965/1056
(91 %)
24 diff
(97.8 %id)
BM479707 eye, retinoblastoma .a 583 to 1534 1 to 967       967/1019
(94 %)
23 diff
(97.8 %id)
BQ945839 leiomyosarcoma, uterus .a 606 to 1521 1 to 916       916/916
(100 %)
9 diff
(99.1 %id)
BM562804 duodenal adenocarcinoma, cell line, small intestine .a 631 to 1491 1 to 864       864/1016
(85 %)
15 diff
(98.6 %id)
BM449464 eye, retinoblastoma .a 703 to 1565 1 to 869       869/1044
(83 %)
14 diff
(98.7 %id)
BM564804 eye, retinoblastoma .a 706 to 1566 1 to 869       869/1044
(83 %)
13 diff
(98.8 %id)
BG696808 skin .a 707 to 1574 1 to 870       870/877
(99 %)
16 diff
(98.2 %id)
BM461617 eye, retinoblastoma .a 707 to 1567 1 to 864       864/986
(87 %)
10 diff
(99.0 %id)
BU175515 epithelioid carcinoma, Pancreas .a 714 to 1573 1 to 865       865/892
(96 %)
22 diff
(97.6 %id)
BM554754 duodenal adenocarcinoma, cell line, small intestine .a 721 to 1726 1 to 1009       1009/1046
(96 %)
22 diff
(97.9 %id)
BM804093 eye, retinoblastoma .a 729 to 1573 1 to 847       847/1090
(77 %)
20 diff
(98.2 %id)
BQ643041 lymph, lymphoma, cell line .a 760 to 1677 1 to 922       922/938
(98 %)
14 diff
(98.6 %id)
BU187522 eye, retinoblastoma .a 763 to 1643 1 to 886       886/889
(99 %)
20 diff
(97.8 %id)
BM927950 hepatocellular carcinoma, cell line, Liver .a 782 to 1691 1 to 910       910/1019
(89 %)
20 diff
(98.1 %id)
BU171072 eye, retinoblastoma .a 784 to 1626 12 to 865       854/903
(94 %)
22 diff
(97.6 %id)
AK129804 dermoid tumor .a 796 to 1939 1 to 1144   available from FLJ,   1144/1144
(100 %)
0 diff
(100 %id)
BQ919329 carcinoma, cell line, Prostate .a 813 to 1743 1 to 931       929/934
(99 %)
14 diff
(98.6 %id)
BU542150 carcinoma, cell line, Prostate .a 813 to 1671 1 to 868       868/886
(97 %)
11 diff
(98.8 %id)
BU154223 eye, retinoblastoma .a 818 to 1725 1 to 916       916/916
(100 %)
17 diff
(98.2 %id)
BU153830 eye, retinoblastoma .a 822 to 1703 1 to 889       889/894
(99 %)
18 diff
(98.0 %id)
BU147369 brain, neuroblastoma, cell line .a 832 to 1681 1 to 856       856/909
(94 %)
11 diff
(98.8 %id)
BM806136 leiomyosarcoma, uterus .a 848 to 1726 1 to 888       888/1075
(82 %)
22 diff
(98.0 %id)
BM452331 eye, retinoblastoma .a 852 to 1737 1 to 892       892/1032
(86 %)
10 diff
(99.1 %id)
BU181492 eye, retinoblastoma .a 878 to 1752 1 to 876       876/877
(99 %)
9 diff
(99.0 %id)
BQ422698 large cell carcinoma, lung .a 882 to 1724 1 to 850   AAA   850/894
(95 %)
10 diff
(98.9 %id)
BX457085 thymus .a 914 to 1917 1004 to 1   fully sequenced,   1004/1004
(100 %)
5 diff
(99.6 %id)
CB594707 Blood, promyelocytic leukemia .a 920 to 1790 1 to 877       877/880
(99 %)
8 diff
(99.1 %id)
BM477101 lymph, lymphoma, cell line .a 942 to 1939 1040 to 42   AAA Submitted on the opposite strand 999/1030
(96 %)
27 diff
(97.4 %id)
BQ230935 epithelioid carcinoma, Pancreas .a 943 to 1798 1 to 861       861/865
(99 %)
10 diff
(98.9 %id)
BX447777 T cells (Jurkat cell line) .a 954 to 1927 972 to 1   fully sequenced,   972/972
(100 %)
8 diff
(99.2 %id)
BQ434922 eye, retinoblastoma .a 959 to 1861 1 to 905       905/907
(99 %)
15 diff
(98.4 %id)
BU957414 adenocarcinoma, cell line, breast .a 971 to 1882 1 to 917       917/920
(99 %)
12 diff
(98.7 %id)
BU154449 eye, retinoblastoma .a 972 to 1833 1 to 867       867/893
(97 %)
20 diff
(97.8 %id)
BM688348 eye, human retina .a 972 to 1590 9 to 626   fully sequenced,   618/626
(98 %)
1 diff
(99.9 %id)
TI_149311700   .a 980 to 1941 1040 to 89   AAA   952/991
(96 %)
22 diff
(97.8 %id)
CR594006 T cells (Jurkat cell line) Cot10-normalized .a 984 to 1940 1 to 957       957/957
(100 %)
0 diff
(100 %id)
AL568700 placenta .a 987 to 1848 935 to 77   fully sequenced,   859/935
(91 %)
7 diff
(99.3 %id)
BQ061067 lymph, lymphoma, cell line .a 993 to 1939 991 to 35   AAA Submitted on the opposite strand 957/970
(98 %)
15 diff
(98.5 %id)
BQ681690 melanotic melanoma, cell line, skin .a 996 to 1851 1 to 861       861/890
(96 %)
17 diff
(98.1 %id)
BQ683204 melanotic melanoma, cell line, skin .a 996 to 1861 1 to 873       873/929
(93 %)
15 diff
(98.4 %id)
BQ672953 epidermoid carcinoma, cell line, salivary gland .a 997 to 1920 1 to 930       930/931
(99 %)
14 diff
(98.5 %id)
BX414551 thymus .a 1002 to 1925 922 to 1   fully sequenced,   922/922
(100 %)
5 diff
(99.5 %id)
AL579879 T cells from T cell leukemia .a 1006 to 1907 902 to 1   fully sequenced,   902/902
(100 %)
8 diff
(99.2 %id)
TI_154115314   .a 1023 to 1941 1001 to 84   AAA   918/1011
(90 %)
28 diff
(97.3 %id)
BM909463 lymph, lymphoma, cell line .a 1024 to 1939 962 to 35   AAA Submitted on the opposite strand 927/935
(99 %)
22 diff
(97.7 %id)
BM800117 embryonal carcinoma, cell line, testis .a 1036 to 1888 1 to 869       869/1119
(77 %)
26 diff
(97.7 %id)
AL581516 B cells (Ramos cell line), B cells from Burkitt lymphoma .a 1049 to 1926 871 to 1   fully sequenced,   871/871
(100 %)
3 diff
(99.7 %id)
BU158298 eye, retinoblastoma .a 1052 to 1922 1 to 885       885/885
(100 %)
40 diff
(95.5 %id)
TI_149275949   .a 1081 to 1667 49 to 635     Submitted on the opposite strand 587/1044
(56 %)
7 diff
(99.4 %id)
TI_149276882   .a 1081 to 1667 50 to 635     Submitted on the opposite strand 586/672
(87 %)
8 diff
(98.9 %id)
TI_149301808   .a 1091 to 1939 930 to 88   AAA   843/953
(88 %)
13 diff
(98.7 %id)
CR592611 B cells (Ramos cell line) .a 1106 to 1940 1 to 835       835/835
(100 %)
0 diff
(100 %id)
CR614555 fetal brain .a 1158 to 1949 1 to 792   tiling clone,   792/792
(100 %)
0 diff
(100 %id)
TI_1948238704   .a 1219 to 1813 1179 to 587     Submitted on the opposite strand 594/1351
(43 %)
46 diff
(96.6 %id)
BG876465 denis_drash .a 1239 to 1780 542 to 1       542/542
(100 %)
0 diff
(100 %id)
EC482738 Prostate .a 1264 to 1359 96 to 1       96/96
(100 %)
0 diff
(100 %id)
BE180844 head_neck .a 1274 to 1418 150 to 3     Submitted on the opposite strand 148/150
(98 %)
4 diff
(97.4 %id)
CX867778 embryonic stem .a 1280 to 1941 688 to 27   AAA   662/662
(100 %)
1 diff
(99.9 %id)
FN174317 breast carcinoma .a 1322 to 1422 107 to 9     Submitted on the opposite strand 99/107
(92 %)
0 diff
(100 %id)
TI_1948238232   .a 1325 to 1813 1069 to 585     Submitted on the opposite strand 485/1287
(37 %)
25 diff
(98.1 %id)
TI_1948238468   .a 1325 to 1813 1083 to 589     Submitted on the opposite strand 495/1352
(36 %)
27 diff
(98.1 %id)
FN086223 breast carcinoma .a 1365 to 1445 84 to 1     Submitted on the opposite strand 79/84
(94 %)
7 diff
(91.7 %id)
FN076448 breast carcinoma .a 1366 to 1429 64 to 1     Submitted on the opposite strand 64/65
(98 %)
0 diff
(100 %id)
BU579446 insulinoma, Pancreas .a 1367 to 1944 580 to 3     Submitted on the opposite strand 578/580
(99 %)
0 diff
(100 %id)
AU160598   .a 1377 to 1939 564 to 1       564/564
(100 %)
4 diff
(99.3 %id)
AU159847   .a 1381 to 1939 556 to 1       556/560
(99 %)
3 diff
(99.5 %id)
BP421636 small intestine .a 1389 to 1913 1 to 525     Submitted on the opposite strand 525/525
(100 %)
0 diff
(100 %id)
FN055541 breast carcinoma .a 1401 to 1501 104 to 1     Submitted on the opposite strand 104/104
(100 %)
3 diff
(97.2 %id)
CX865880 embryonic stem .a 1402 to 1941 570 to 31   AAA   540/540
(100 %)
2 diff
(99.7 %id)
TI_1948238942   .a 1419 to 1813 986 to 592     Submitted on the opposite strand 395/1367
(28 %)
22 diff
(98.4 %id)
TI_1948238469   .a 1422 to 1813 984 to 588     Submitted on the opposite strand 397/1213
(32 %)
18 diff
(98.6 %id)
AU160529   .a 1427 to 1939 513 to 1       513/554
(92 %)
0 diff
(100 %id)
AU160593   .a 1427 to 1939 513 to 1       513/519
(98 %)
0 diff
(100 %id)
TI_1948238705   .a 1434 to 1813 987 to 597     Submitted on the opposite strand 391/1192
(32 %)
34 diff
(97.2 %id)
DB576891 hypothalamus .a 1458 to 1943 1 to 486     Submitted on the opposite strand 486/486
(100 %)
3 diff
(99.4 %id)
DB571452 hypothalamus .a 1465 to 1937 1 to 473     Submitted on the opposite strand 473/475
(99 %)
3 diff
(99.4 %id)
DB571151 hypothalamus .a 1467 to 1939 1 to 473     Submitted on the opposite strand 473/475
(99 %)
1 diff
(99.8 %id)
DB548527 hippocampus .a 1490 to 1937 1 to 448     Submitted on the opposite strand 448/450
(99 %)
1 diff
(99.8 %id)
AU160286   .a 1491 to 1939 448 to 1       448/448
(100 %)
1 diff
(99.8 %id)
DB561704 hypothalamus .a 1504 to 1939 1 to 436     Submitted on the opposite strand 436/436
(100 %)
9 diff
(98.0 %id)
DB558583 hypothalamus .a 1507 to 1937 1 to 431     Submitted on the opposite strand 431/433
(99 %)
1 diff
(99.8 %id)
TI_1948238233   .a 1512 to 1813 901 to 587     Submitted on the opposite strand 313/1213
(25 %)
16 diff
(98.7 %id)
BM144713 leukopheresis .a 1517 to 1940 431 to 15   AAA   417/417
(100 %)
10 diff
(97.7 %id)
DB558571 hypothalamus .a 1518 to 1943 1 to 426     Submitted on the opposite strand 426/426
(100 %)
3 diff
(99.3 %id)
DB513925 testis .a 1524 to 1939 1 to 415     Submitted on the opposite strand 415/415
(100 %)
10 diff
(97.6 %id)
BM144277 leukopheresis .a 1533 to 1934 423 to 22   AAA   402/402
(100 %)
4 diff
(99.1 %id)
BU726745 eye, human retina .a 1544 to 1939 414 to 19   fully sequenced, AAA   396/396
(100 %)
1 diff
(99.8 %id)
BF092837 testis_normal .a 1608 to 1882 307 to 26       282/316
(89 %)
1 diff
(99.7 %id)
CX781792 human embryonic stem cells .a 1692 to 1941 283 to 34   AAA   250/250
(100 %)
2 diff
(99.2 %id)
EC514778 Prostate .a 1841 to 1938 11 to 108       98/111
(88 %)
4 diff
(96.4 %id)
DC398079 testis .b 1 to 576 1 to 577   tiling clone,   577/577
(100 %)
1 diff
(99.9 %id)
TI_45211923   .b 108 to 1017 89 to 996       919/996
(92 %)
97 diff
(90.3 %id)
TI_45215339   .b 108 to 881 86 to 870       795/877
(90 %)
60 diff
(93.2 %id)
FN106155 breast carcinoma .b 109 to 184 1 to 76       76/76
(100 %)
3 diff
(96.1 %id)
BC014208 Eye, retinoblastoma .b 109 to 1959 1429 to 3279 exact tiling clone, AAA   1858/3279
(56 %)
6 diff
(99.9 %id)
TI_57193653   .b 110 to 820 53 to 765       713/717
(99 %)
8 diff
(98.9 %id)
BJ994660 hepatoblastoma .b 111 to 543 1 to 433       433/433
(100 %)
1 diff
(99.8 %id)
BM471971 eye, retinoblastoma .b 111 to 1100 1 to 1003       1003/1039
(96 %)
30 diff
(97.2 %id)
AK098765 brain .b 112 to 1959 1 to 1848 exact available from FLJ,   1848/1848
(100 %)
1 diff
(100.0 %id)
DC301224 bladder .b 112 to 584 1 to 474       474/474
(100 %)
1 diff
(99.8 %id)
DC304213 cerebellum .b 112 to 673 1 to 562       562/562
(100 %)
2 diff
(99.7 %id)
BJ994388 hepatoblastoma .b 112 to 615 1 to 504       504/504
(100 %)
0 diff
(100 %id)
BJ995152 hepatoblastoma .b 112 to 691 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BJ997090.
matches multiple genes
hepatoblastoma .b 112 to 521 1 to 410     also hits gene SLC40A1 410/410
(100 %)
1 diff
(99.8 %id)
TI_44166137   .b 112 to 831 130 to 853       728/923
(78 %)
29 diff
(96.9 %id)
TI_44166450   .b 112 to 729 92 to 709       623/709
(87 %)
6 diff
(99.2 %id)
TI_44166541   .b 112 to 962 91 to 944       859/962
(89 %)
33 diff
(96.6 %id)
TI_44166555   .b 112 to 854 88 to 827       745/827
(90 %)
8 diff
(99.1 %id)
TI_44166625   .b 112 to 813 81 to 788       714/788
(90 %)
6 diff
(99.3 %id)
TI_44000679   .b 112 to 727 83 to 709       638/709
(89 %)
56 diff
(92.2 %id)
TI_45208770   .b 112 to 835 89 to 806       723/1070
(67 %)
50 diff
(95.4 %id)
TI_45209032   .b 112 to 802 83 to 779       703/779
(90 %)
8 diff
(99.0 %id)
TI_45211191   .b 112 to 878 134 to 902       778/904
(86 %)
69 diff
(92.4 %id)
TI_45213520   .b 112 to 888 91 to 868       784/1014
(77 %)
16 diff
(98.5 %id)
TI_45214650   .b 112 to 885 122 to 893       778/895
(86 %)
17 diff
(98.2 %id)
TI_44348642   .b 112 to 886 126 to 901       780/901
(86 %)
27 diff
(97.1 %id)
TI_44349808   .b 112 to 876 124 to 891       774/891
(86 %)
27 diff
(97.0 %id)
TI_44343591   .b 112 to 731 85 to 710       632/710
(89 %)
6 diff
(99.2 %id)
TI_44343795   .b 112 to 855 94 to 839       752/839
(89 %)
11 diff
(98.7 %id)
BM147114 leukopheresis .b 112 to 600 1 to 491       492/491
(100 %)
6 diff
(98.8 %id)
BJ992245.
matches multiple genes
hepatoblastoma .b 113 to 604 1 to 492     also hits gene IQGAP2 492/492
(100 %)
1 diff
(99.8 %id)
DB101104 thymus .b 113 to 603 2 to 492   capped   491/491
(100 %)
0 diff
(100 %id)
AU142496   .b 113 to 748 2 to 637   capped   636/640
(99 %)
6 diff
(99.1 %id)
AU142657   .b 113 to 973 2 to 858   capped   857/857
(100 %)
11 diff
(98.8 %id)
BM450763 eye, retinoblastoma .b 114 to 1055 1 to 947       947/1088
(87 %)
19 diff
(98.3 %id)
BM558934 eye, retinoblastoma .b 114 to 1117 1 to 1025       1025/1063
(96 %)
31 diff
(97.1 %id)
BQ063207 lymph, lymphoma, cell line .b 114 to 1090 1 to 990       990/1026
(96 %)
22 diff
(97.9 %id)
BQ945246 carcinoma, cell line, Prostate .b 114 to 1039 1 to 933       933/936
(99 %)
17 diff
(98.2 %id)
TI_44166699   .b 116 to 515 86 to 485       401/485
(82 %)
8 diff
(98.4 %id)
DB342296 thymus .b 1451 to 1959 509 to 1       509/509
(100 %)
1 diff
(99.9 %id)
AU159797   .b 1587 to 1959 373 to 1       373/373
(100 %)
0 diff
(100 %id)
AU159922   .b 1624 to 1959 336 to 1       336/340
(98 %)
0 diff
(100 %id)
DC412358 kidney, tumor tissue .c 1 to 365 192 to 556   tiling clone,   365/556
(65 %)
6 diff
(99.0 %id)
DC411743 kidney, tumor tissue .c 129 to 637 1 to 509       509/509
(100 %)
1 diff
(99.9 %id)
DC304553 cerebellum .c 131 to 691 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC320354 brain .c 134 to 699 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC327223 caudate nucleus .c 143 to 690 1 to 548       548/548
(100 %)
4 diff
(99.3 %id)
DC315212 amygdala .c 144 to 718 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC412051 kidney, tumor tissue .c 144 to 599 1 to 462       462/462
(100 %)
8 diff
(98.3 %id)
DC302144 cerebellum .c 145 to 935 1 to 791       791/791
(100 %)
8 diff
(99.0 %id)
DC304483 cerebellum .c 145 to 715 1 to 571       571/571
(100 %)
2 diff
(99.7 %id)
DC325761 caudate nucleus .c 145 to 724 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC327370 caudate nucleus .c 145 to 680 1 to 536       536/536
(100 %)
0 diff
(100 %id)
DC332094 hippocampus .c 145 to 744 1 to 601       601/601
(100 %)
2 diff
(99.7 %id)
DC338369 subthalamic nucleus .c 145 to 693 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
BP210139 cerebellum .c 145 to 725 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC349706 brain .c 145 to 708 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC356832 heart .c 145 to 626 1 to 483       483/483
(100 %)
1 diff
(99.8 %id)
DC357040 heart .c 145 to 720 1 to 578       578/578
(100 %)
5 diff
(99.2 %id)
DC385538 skeletal muscle .c 145 to 652 1 to 509       509/509
(100 %)
2 diff
(99.7 %id)
DC395284 testis .c 145 to 703 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC395642 testis .c 145 to 625 1 to 482       482/482
(100 %)
2 diff
(99.6 %id)
DC396028 testis .c 145 to 700 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
DC397153 testis .c 145 to 595 1 to 451       451/453
(99 %)
2 diff
(99.6 %id)
DC405616 thymus .c 145 to 720 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC327500 caudate nucleus .c 146 to 695 15 to 564       550/550
(100 %)
0 diff
(100 %id)
NM_004046.4   .c 158 to 2052 1 to 1895 exact RefSeq,   1895/1895
(100 %)
5 diff
(99.8 %id)
DC398404 testis .c 158 to 736 1 to 586       584/586
(99 %)
7 diff
(98.9 %id)
TI_44168976   .c 163 to 811 84 to 731       648/731
(88 %)
7 diff
(99.1 %id)
TI_44349368   .c 173 to 963 89 to 884       796/944
(84 %)
13 diff
(98.7 %id)
DC301429   .c 182 to 963 1 to 784   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 784/794
(98 %)
7 diff
(99.2 %id)
AK129739 adrenal gland .c 183 to 2041 1 to 1859 exact tiling clone, available from FLJ,   1859/1859
(100 %)
0 diff
(100 %id)
AK129900 heart .c 183 to 2041 1 to 1859 exact available from FLJ,   1859/1861
(99 %)
1 diff
(100.0 %id)
DC356471 heart .c 183 to 748 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
DC419216 stomach, tumor tissue .c 183 to 755 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
BP196539 adrenal gland .c 184 to 740 1 to 557   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 557/582
(95 %)
0 diff
(100 %id)
DA261793 caudate nucleus .c 184 to 731 2 to 549   capped   548/560
(97 %)
2 diff
(99.7 %id)
BX421741 T cells (Jurkat cell line) .c 184 to 1194 1 to 1011       1011/1011
(100 %)
3 diff
(99.8 %id)
DC357113 heart .c 184 to 670 1 to 487       487/487
(100 %)
0 diff
(100 %id)
AU121554 mammary gland .c 184 to 925 2 to 743   capped   742/742
(100 %)
1 diff
(99.9 %id)
DA664479   .c 184 to 938 2 to 756   capped   755/756
(99 %)
6 diff
(99.3 %id)
DC397269 testis .c 184 to 667 1 to 489       489/489
(100 %)
7 diff
(98.6 %id)
DB193527 ovary, tumor tissue .c 184 to 731 2 to 549   capped   548/560
(97 %)
1 diff
(99.9 %id)
AU142726   .c 184 to 978 2 to 795   capped   794/794
(100 %)
2 diff
(99.8 %id)
AU143713   .c 184 to 1029 2 to 846   capped   845/847
(99 %)
11 diff
(98.8 %id)
D14710 colon tumor .c 185 to 2041 1 to 1857 exact     1857/1857
(100 %)
0 diff
(100 %id)
BQ064415 lymph, lymphoma, cell line .c 185 to 1123 1 to 948       948/1021
(92 %)
22 diff
(97.9 %id)
AU142298   .c 185 to 855 2 to 672   capped   671/671
(100 %)
0 diff
(100 %id)
AU142841   .c 185 to 1038 2 to 847   capped   846/846
(100 %)
12 diff
(98.6 %id)
AU142549   .c 187 to 1020 2 to 836   capped   835/844
(98 %)
10 diff
(98.9 %id)
DA682849   .c 188 to 966 2 to 782   capped   781/802
(97 %)
7 diff
(99.2 %id)
X59066 lung .c 189 to 2041 1 to 1852 exact AAA   1852/1852
(100 %)
1 diff
(100.0 %id)
CR617650 thymus .c 191 to 2019 1 to 1829 exact     1829/1829
(100 %)
0 diff
(100 %id)
CR626480 thymus .c 191 to 2027 1 to 1837 exact     1837/1837
(100 %)
0 diff
(100 %id)
BC067385 Eye, retinoblastoma .c 195 to 2041 13 to 1859 exact available from MGC, AAA   1847/1847
(100 %)
0 diff
(100 %id)
CR613857 thymus .c 195 to 2006 1 to 1812 exact     1812/1812
(100 %)
0 diff
(100 %id)
AU124632   .c 195 to 993 38 to 830   capped   793/795
(99 %)
12 diff
(98.5 %id)
AU125427   .c 195 to 1044 2 to 848   capped   847/870
(97 %)
13 diff
(98.6 %id)
AU143461   .c 195 to 1042 2 to 847   capped   846/847
(99 %)
15 diff
(98.3 %id)
AU143585   .c 195 to 969 2 to 775   capped   774/841
(92 %)
3 diff
(99.7 %id)
AU143647   .c 195 to 1002 2 to 806   capped   805/817
(98 %)
12 diff
(98.6 %id)
AU143726   .c 195 to 942 2 to 748   capped   747/747
(100 %)
2 diff
(99.8 %id)
CR597477 B cells (Ramos cell line) .c 196 to 2029 1 to 1834 exact     1834/1834
(100 %)
0 diff
(100 %id)
AU143209   .c 196 to 1023 2 to 828   capped   827/827
(100 %)
8 diff
(99.1 %id)
BC004521 Lung, small cell carcinoma .c 198 to 2043 862 to 2707 exact AAA   1846/2707
(68 %)
7 diff
(99.8 %id)
AU148459   .c 1460 to 2041 582 to 3       580/582
(99 %)
3 diff
(99.5 %id)
AU149092   .c 1467 to 2040 572 to 1       572/572
(100 %)
3 diff
(99.5 %id)
AU160762   .c 1478 to 2041 564 to 1       564/565
(99 %)
4 diff
(99.3 %id)
AU147345 mammary gland .c 1479 to 2043 566 to 1   tiling clone,   566/567
(99 %)
2 diff
(99.7 %id)
AU160039   .c 1483 to 2040 556 to 1       556/560
(99 %)
2 diff
(99.7 %id)
AU159841   .c 1486 to 2041 555 to 1       555/557
(99 %)
4 diff
(99.3 %id)
AU160657   .c 1492 to 2041 549 to 1       549/552
(99 %)
2 diff
(99.7 %id)
AU160776   .c 1492 to 2041 549 to 1       549/554
(99 %)
4 diff
(99.3 %id)
AU160546   .c 1496 to 2041 546 to 1       546/550
(99 %)
3 diff
(99.5 %id)
AU160706   .c 1501 to 2041 543 to 3       541/545
(99 %)
5 diff
(99.1 %id)
AU160341   .c 1507 to 2041 535 to 1       535/537
(99 %)
4 diff
(99.3 %id)
AU159646   .c 1529 to 2041 513 to 1       513/514
(99 %)
3 diff
(99.5 %id)
DB322659   .c 1551 to 2041 494 to 3       492/494
(99 %)
3 diff
(99.4 %id)
DC425764 cerebellum .c 1572 to 2043 470 to 1       470/470
(100 %)
3 diff
(99.4 %id)
AU159966   .c 1582 to 2041 459 to 1       459/466
(98 %)
0 diff
(100 %id)
DB322021   .c 1709 to 2041 333 to 1       333/335
(99 %)
0 diff
(100 %id)
BG773384 testis .d 1 to 662 1 to 662   tiling clone,   662/662
(100 %)
5 diff
(99.3 %id)
DC398537 testis .d 37 to 597 1 to 561       561/561
(100 %)
2 diff
(99.7 %id)
DC396955 testis .d 53 to 617 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
DC399778 testis .d 53 to 593 1 to 541       541/541
(100 %)
1 diff
(99.9 %id)
DC395721 testis .d 54 to 583 1 to 531       531/531
(100 %)
3 diff
(99.5 %id)
DC396231 testis .d 54 to 577 1 to 525       525/525
(100 %)
1 diff
(99.9 %id)
DC397061 testis .d 64 to 624 1 to 563       563/564
(99 %)
3 diff
(99.5 %id)
DC406439 thymus .d 64 to 607 1 to 544       544/544
(100 %)
1 diff
(99.9 %id)
DC395448 testis .d 65 to 621 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
DC397541 testis .d 66 to 614 1 to 551       551/551
(100 %)
2 diff
(99.7 %id)
BP369126 testis .d 72 to 643 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
DC398874 testis .d 80 to 538 1 to 460       460/460
(100 %)
2 diff
(99.6 %id)
CD244623 testis .d 84 to 898 23 to 842   tiling clone,   820/873
(93 %)
16 diff
(98.2 %id)
DC395550 testis .d 87 to 652 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC395951 testis .d 87 to 686 1 to 600       600/600
(100 %)
0 diff
(100 %id)
DC398118 testis .d 87 to 654 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
BP371756 testis .d 113 to 691 1 to 579       579/581
(99 %)
2 diff
(99.7 %id)
DA614701   .d 114 to 697 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DA617779   .d 114 to 693 2 to 583   capped   582/582
(100 %)
3 diff
(99.5 %id)
DB021607 testis .d 114 to 675 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DB043631 testis .d 114 to 690 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DB052103 testis .d 114 to 677 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB054687 testis .d 114 to 660 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB055265 testis .d 114 to 672 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB058893 testis .d 114 to 651 2 to 540   capped   539/539
(100 %)
2 diff
(99.7 %id)
DB118046 thymus .d 114 to 664 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
AU142835   .d 114 to 989 2 to 874   tiling clone, capped   873/875
(99 %)
11 diff
(98.8 %id)
AU142918   .d 114 to 863 2 to 749   capped   748/765
(97 %)
5 diff
(99.4 %id)
AU143381   .d 114 to 916 2 to 804   tiling clone, capped   803/803
(100 %)
8 diff
(99.1 %id)
AU143475   .d 114 to 938 2 to 821   tiling clone, capped   820/821
(99 %)
15 diff
(98.2 %id)
AU143558   .d 114 to 882 2 to 772   tiling clone, capped   771/772
(99 %)
7 diff
(99.1 %id)
BU187113 eye, retinoblastoma .d 120 to 865 11 to 759       749/766
(97 %)
19 diff
(97.6 %id)
BG474544 eye, retinoblastoma .d 126 to 570 1 to 447       447/518
(86 %)
23 diff
(95.6 %id)
BE259214 eye, retinoblastoma .d 159 to 794 28 to 660       633/770
(82 %)
20 diff
(97.5 %id)
BE259136 eye, retinoblastoma .d 159 to 809 28 to 679       652/690
(94 %)
15 diff
(97.9 %id)
AU160035   .d 1369 to 1939 573 to 1   tiling clone,   573/573
(100 %)
13 diff
(97.8 %id)
AU160110   .d 1385 to 1937 552 to 1       552/569
(97 %)
4 diff
(99.3 %id)
AU160559   .d 1385 to 1937 553 to 1   tiling clone,   553/553
(100 %)
4 diff
(99.3 %id)
AU160630   .d 1417 to 1939 523 to 1       523/552
(94 %)
15 diff
(97.3 %id)
AU160481   .d 1420 to 1939 519 to 1       519/542
(95 %)
11 diff
(98.0 %id)
DC304399 cerebellum .e 1 to 564 2 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC338319 subthalamic nucleus .e 1 to 552 2 to 553       553/553
(100 %)
0 diff
(100 %id)
DC354528 Kidney .e 1 to 588 2 to 589   tiling clone,   589/589
(100 %)
0 diff
(100 %id)
DC397719 testis .e 1 to 580 2 to 581       581/581
(100 %)
0 diff
(100 %id)
DC397773 testis .e 1 to 553 2 to 554       554/554
(100 %)
0 diff
(100 %id)
DC420682 uterus .e 2 to 502 1 to 501       501/501
(100 %)
0 diff
(100 %id)
AU143028   .e 2 to 834 2 to 835   tiling clone, capped   834/834
(100 %)
11 diff
(98.7 %id)
AU143699   .e 12 to 825 2 to 809   tiling clone, capped   808/808
(100 %)
11 diff
(98.7 %id)
DC314573 amygdala .e 13 to 592 3 to 582       582/582
(100 %)
0 diff
(100 %id)
BM450898 eye, retinoblastoma .e 19 to 659 17 to 657       641/939
(68 %)
22 diff
(97.7 %id)
BU153850 eye, retinoblastoma .e 25 to 832 1 to 812   tiling clone,   812/888
(91 %)
13 diff
(98.6 %id)
BE782822 eye, retinoblastoma .e 32 to 776 1 to 745       745/927
(80 %)
13 diff
(98.6 %id)
DC302657 cerebellum .e 41 to 564 1 to 524       524/524
(100 %)
1 diff
(99.9 %id)
BM820648 stomach .e 81 to 501 1 to 421       421/421
(100 %)
8 diff
(98.1 %id)
CD702063 normal nasopharynx .e 125 to 366 166 to 407       379/415
(91 %)
8 diff
(98.1 %id)
AU160196   .e 1277 to 1816 538 to 1   tiling clone,   538/543
(99 %)
11 diff
(98.0 %id)
AU160754   .e 1295 to 1850 557 to 1   tiling clone,   557/557
(100 %)
11 diff
(98.1 %id)
AK092735 small intestine .f 1 to 1931 1 to 1931 exact tiling clone, available from FLJ,   1931/1931
(100 %)
0 diff
(100 %id)
DA077224 cerebellum .f 1 to 561 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA697598   .f 2 to 561 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA916326 small intestine .f 2 to 572 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA515442 brain .f 16 to 574 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BE794906 lung, small cell carcinoma .f 48 to 792 1 to 744       744/764
(97 %)
3 diff
(99.7 %id)
DB331691 small intestine .f 1386 to 1931 546 to 1       546/546
(100 %)
0 diff
(100 %id)
AK310051 small intestine .g 1 to 1015 2 to 1016   tiling clone,   1016/1016
(100 %)
1 diff
(100.0 %id)
DA931108 small intestine .g 1 to 570 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA516311 brain .g 20 to 578 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
AK289457   .g 29 to 2213 1 to 2185 exact tiling clone,   2185/2185
(100 %)
1 diff
(100.0 %id)
DC301836   .g 29 to 629 1 to 601       601/601
(100 %)
1 diff
(99.9 %id)
DC298078   .g 79 to 649 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
DC311275 alzheimer cortex .g 247 to 779 1 to 534       534/534
(100 %)
1 diff
(99.9 %id)
BG708027 brain, hypothalamus .g 264 to 993 1 to 729       729/729
(100 %)
8 diff
(99.0 %id)
BI596322 brain, hypothalamus .g 264 to 1058 1 to 797       797/798
(99 %)
12 diff
(98.5 %id)
DC305131 cerebellum .g 266 to 833 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
TI_45208924   .g 268 to 1058 95 to 887       793/888
(89 %)
13 diff
(98.6 %id)
DB489209 hypothalamus .g 271 to 726 1 to 456       456/459
(99 %)
2 diff
(99.6 %id)
DB500300 hypothalamus .g 271 to 757 1 to 487       487/487
(100 %)
1 diff
(99.8 %id)
DC338051 subthalamic nucleus .g 311 to 870 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
BQ425076 eye, retinoblastoma .g 414 to 1148 1 to 739       739/837
(88 %)
5 diff
(99.5 %id)
DB031627 testis .h 1 to 603 2 to 605   tiling clone, capped   604/604
(100 %)
1 diff
(99.9 %id)
T56975 fetal spleen, Spleen .h 456 to 655 1 to 201   tiling clone,   201/201
(100 %)
1 diff
(99.6 %id)
T56974 fetal spleen, Spleen .h 1684 to 1920 236 to 1   tiling clone,   236/239
(98 %)
3 diff
(98.8 %id)
AU119108 whole embryo, mainly head .i 1 to 659 2 to 661   tiling clone, capped   660/670
(98 %)
4 diff
(99.5 %id)
AU145529 whole embryo, mainly head .i 1395 to 1937 544 to 3   tiling clone,   512/546
(93 %)
14 diff
(97.5 %id)
DC387401   .j 1 to 554 3 to 556       556/556
(100 %)
2 diff
(99.7 %id)
DC304942 cerebellum .j 1 to 564 2 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC350062 brain .j 1 to 567 2 to 568   tiling clone,   568/568
(100 %)
0 diff
(100 %id)
BG470475 eye, retinoblastoma .j 22 to 629 1 to 621       621/723
(85 %)
33 diff
(95.5 %id)
BF797803 lymph, lymphoma, cell line .j 23 to 780 13 to 779   tiling clone,   767/809
(94 %)
29 diff
(96.5 %id)
BE258585 eye, retinoblastoma .j 42 to 656 1 to 614       614/657
(93 %)
21 diff
(96.9 %id)
BE251555 eye, retinoblastoma .j 42 to 747 1 to 708   tiling clone,   708/710
(99 %)
24 diff
(96.7 %id)
BE256896 eye, retinoblastoma .j 43 to 640 1 to 601   tiling clone,   601/721
(83 %)
6 diff
(99.2 %id)
BP355792   .k 1 to 575 1 to 581   tiling clone,   581/581
(100 %)
12 diff
(98.0 %id)
DB016765 esophageal, tumor tissue .k 2 to 571 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
BP366732 thymus .k 3 to 581 1 to 580 S39C T41E H42G L43S Q44S ...     580/580
(100 %)
8 diff
(98.7 %id)
BP367332 thymus .k 3 to 583 1 to 581 exact     581/581
(100 %)
0 diff
(100 %id)
DA095968 cerebellum .k 4 to 568 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA927677 small intestine .k 4 to 580 2 to 578 exact capped   577/577
(100 %)
0 diff
(100 %id)
DB153027 thymus .k 4 to 555 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB025233 testis .k 8 to 561 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA064334 cerebellum .k 52 to 628 2 to 578 exact tiling clone, capped   577/577
(100 %)
2 diff
(99.7 %id)
DC407228 thymus .l 1 to 552 1 to 552   tiling clone,   552/552
(100 %)
0 diff
(100 %id)
DC354327 heart .l 5 to 575 1 to 571       571/571
(100 %)
3 diff
(99.5 %id)
AK294804 brain .l 7 to 1001 1 to 995 exact tiling clone,   995/995
(100 %)
1 diff
(99.9 %id)
DC321640 brain .l 7 to 569 1 to 564       564/564
(100 %)
2 diff
(99.7 %id)
DC392603 stomach .l 9 to 578 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
DC392614 stomach .l 9 to 580 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
DB489201 hypothalamus .l 752 to 1219 1 to 468   tiling clone,   468/468
(100 %)
2 diff
(99.6 %id)
DB505607 hypothalamus .l 752 to 1211 1 to 460   tiling clone,   460/461
(99 %)
3 diff
(99.4 %id)
DC419188 stomach, tumor tissue .m 1 to 549 3 to 551 exact tiling clone,   551/551
(100 %)
1 diff
(99.9 %id)
DA357342 subthalamic nucleus .n 1 to 549 3 to 551 exact tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
DB030433 testis .o 1 to 552 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DB031418 testis .o 1 to 607 2 to 609 D13* tiling clone, capped   608/608
(100 %)
2 diff
(99.7 %id)
DB037606 testis .o 1 to 556 2 to 558   capped   557/557
(100 %)
3 diff
(99.5 %id)
DB042192 testis .o 1 to 584 2 to 586   capped   585/585
(100 %)
3 diff
(99.5 %id)
DB053945 testis .o 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
BE258100 eye, retinoblastoma .p 1 to 518 1 to 526 D129I I130* tiling clone,   526/671
(78 %)
7 diff
(99.0 %id)
DA091529 cerebellum .q 1 to 578 2 to 579 exact tiling clone, capped   578/578
(100 %)
1 diff
(99.9 %id)
DC398060 testis .r 1 to 569 1 to 569 exact tiling clone,   569/569
(100 %)
1 diff
(99.9 %id)
DC306108 cerebellum .s 1 to 577 2 to 578 exact     578/578
(100 %)
1 diff
(99.9 %id)
DC344535 cervix .s 1 to 567 2 to 568   tiling clone,   568/568
(100 %)
0 diff
(100 %id)
DC395505 testis .s 6 to 577 1 to 572 N58D tiling clone,   572/572
(100 %)
1 diff
(99.9 %id)
BC035703 Eye, retinoblastoma .t-u 1 to 2142 2178 to 36 exact tiling clone, available from MGC, Submitted on the opposite strand 2143/2157
(99 %)
1 diff
(100.0 %id)
DA851804 placenta .t-u 174 to 739 2 to 568 A5G G6R W7V C9L R10Q ... capped   567/567
(100 %)
1 diff
(99.9 %id)
DA880462 Prostate .t-u 175 to 730 2 to 558 A5G G6R W7V C9L R10Q ... capped   557/557
(100 %)
1 diff
(99.9 %id)
DB101887 thymus .t-u 175 to 728 2 to 556 A5G G6R W7V C9L R10Q ... capped   555/555
(100 %)
2 diff
(99.7 %id)
DB111423 thymus .t-u 175 to 744 2 to 571 S32F capped   570/570
(100 %)
3 diff
(99.5 %id)
BM559100 eye, retinoblastoma .t-u 1483 to 2142 685 to 25   available from MGC, Submitted on the opposite strand 661/689
(95 %)
0 diff
(100 %id)
BE256617 eye, retinoblastoma .u 1 to 528 1 to 535 S2V S3L I4Y L5S E6C ... tiling clone,   535/535
(100 %)
13 diff
(97.6 %id)
BE254002 eye, retinoblastoma .u 3 to 742 1 to 719 D17I E19K E20K T21L R23V ...     719/876
(82 %)
41 diff
(95.4 %id)
BE254165 eye, retinoblastoma .u 3 to 651 1 to 647 V92D G93W S94V N95Q W96L ... tiling clone,   647/649
(99 %)
16 diff
(97.6 %id)
BE254242 eye, retinoblastoma .u 3 to 609 1 to 607 exact tiling clone,   607/607
(100 %)
2 diff
(99.7 %id)
BE254172 eye, retinoblastoma .u 3 to 619 1 to 616 exact     616/617
(99 %)
7 diff
(98.9 %id)
BI598042 brain, hypothalamus .u 477 to 1297 1 to 819   tiling clone,   819/858
(95 %)
21 diff
(97.6 %id)
BI596990 brain, hypothalamus .u 477 to 1289 1 to 812   tiling clone,   812/814
(99 %)
26 diff
(96.9 %id)
TI_45213305   .u 482 to 1297 126 to 939       814/978
(83 %)
6 diff
(99.4 %id)
TI_45213355   .u 482 to 1289 125 to 931       807/933
(86 %)
22 diff
(97.7 %id)
DB256506 uterus .u 712 to 1280 2 to 570   tiling clone, capped   569/569
(100 %)
3 diff
(99.5 %id)
AA349525 brain .u 993 to 1394 1 to 402   tiling clone,   402/402
(100 %)
1 diff
(99.8 %id)
DA059739 cerebellum .u 1208 to 1778 2 to 572   tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
CR627212 small intestine .u 1465 to 6011 1 to 4547   tiling clone, available from DKFZ, AAA   4547/4547
(100 %)
1 diff
(100.0 %id)
EH344569   .u 2581 to 2669 1 to 87       87/87
(100 %)
1 diff
(98.9 %id)
AA360815   .u 3777 to 4054 1 to 278       278/278
(100 %)
0 diff
(100 %id)
BX477369   .u 4171 to 4745 1 to 575   tiling clone,   575/575
(100 %)
0 diff
(100 %id)
DB111743 thymus .u 4223 to 4779 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
BF444990 carcinoid, lung .u 4852 to 5288 1 to 441     Submitted on the opposite strand 441/441
(100 %)
12 diff
(97.3 %id)
AA973964 carcinoid, lung .u 4856 to 5316 1 to 461     Submitted on the opposite strand 461/461
(100 %)
0 diff
(100 %id)
FN083779 breast carcinoma .u 5730 to 5794 67 to 1     Submitted on the opposite strand 67/68
(98 %)
2 diff
(97.1 %id)
DA756517   .va 1 to 555 2 to 556 exact tiling clone, capped   555/555
(100 %)
1 diff
(99.9 %id)
AK302272 testis Gene ATP5A1, variant not shown         This clone was ignored    
DA054884 cerebellum Gene ATP5A1, variant not shown       capped      
DA073706 cerebellum Gene ATP5A1, variant not shown       capped      
DA085099 cerebellum Gene ATP5A1, variant not shown       capped      
DA928079 small intestine Gene ATP5A1, variant not shown       capped      
DA951534 Spleen Gene ATP5A1, variant not shown       capped      
DB107590 thymus Gene ATP5A1, variant not shown       capped      
DB110050 thymus Gene ATP5A1, variant not shown       capped      
DB113389 thymus Gene ATP5A1, variant not shown       capped      
DB129956 thymus Gene ATP5A1, variant not shown       capped      
BP371516 testis Gene ATP5A1, variant not shown              
366 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u, .va Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI