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Gene ATP2A2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
398 representative clones for gene ATP2A2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_170665.3   .a 1 to 8312 1 to 8312 exact RefSeq, AAA   8312/8312
(100 %)
0 diff
(100 %id)
M23114   .a 401 to 4531 1 to 4131   tiling clone,   4131/4134
(99 %)
3 diff
(100.0 %id)
CN260019 embryonic stem cells, cell lines H1, H7, andH9 .a 413 to 1142 1 to 730   tiling clone,   730/730
(100 %)
4 diff
(99.5 %id)
BC035588 Eye, retinoblastoma .a 463 to 4540 10 to 4087   tiling clone, available from MGC, AAA   4078/4078
(100 %)
0 diff
(100 %id)
BM466360 eye, retinoblastoma .a 465 to 1399 1 to 951       951/972
(97 %)
25 diff
(97.5 %id)
CX865788 embryonic stem .a 483 to 1248 1 to 766       766/766
(100 %)
0 diff
(100 %id)
DR004165 Liver .a 497 to 1243 1 to 747       747/747
(100 %)
5 diff
(99.4 %id)
DA245506 brain .a 559 to 1148 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
TI_1948149742   .a 563 to 1424 134 to 1001       868/1432
(60 %)
42 diff
(97.1 %id)
TI_1948149743   .a 563 to 1424 129 to 988       860/1413
(60 %)
50 diff
(96.5 %id)
TI_1948150654   .a 563 to 1292 132 to 861       730/1450
(50 %)
28 diff
(98.1 %id)
TI_1948150655   .a 563 to 1483 124 to 1041       918/1391
(65 %)
38 diff
(97.3 %id)
DB073712 testis .a 655 to 1196 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BQ312176 breast_normal .a 661 to 1174 539 to 33       507/539
(94 %)
6 diff
(98.9 %id)
AW675282 cervical carcinoma cell line, cervix .a 786 to 1303 1 to 517       517/517
(100 %)
1 diff
(99.9 %id)
DA248806 brain .a 802 to 1356 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BM799924 eye, retinoblastoma .a 811 to 1848 1 to 1052       1052/1107
(95 %)
22 diff
(98.1 %id)
CF551955 Pooled muscle (cardiac and skeletal) .a 835 to 1618 1 to 793       793/892
(88 %)
19 diff
(97.9 %id)
DB071912 testis .a 847 to 1388 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA331234 hippocampus .a 867 to 1322 2 to 457   capped   456/456
(100 %)
0 diff
(100 %id)
BM465954 eye, retinoblastoma .a 885 to 1641 14 to 777       764/1090
(70 %)
23 diff
(97.9 %id)
DA314291 hippocampus .a 891 to 1446 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA099884 cerebellum .a 892 to 1451 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA186351 amygdala .a 892 to 1435 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA330352 hippocampus .a 897 to 1450 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BM468871 duodenal adenocarcinoma, cell line, small intestine .a 933 to 1854 1 to 922       922/939
(98 %)
12 diff
(98.8 %id)
AW275673 normal squamous epithelium, tongue .a 1008 to 1156 6 to 154     Submitted on the opposite strand 149/160
(93 %)
7 diff
(95.7 %id)
AL046795 testis .a 1013 to 1503 1 to 491       491/491
(100 %)
0 diff
(100 %id)
BU175560 embryonal carcinoma, cell line, testis .a 1075 to 1871 1 to 802       802/896
(89 %)
6 diff
(99.4 %id)
AA488579   .a 1081 to 1602 1 to 522       522/522
(100 %)
7 diff
(98.7 %id)
BQ229918 large cell carcinoma, lung .a 1096 to 1954 1 to 864       864/864
(100 %)
5 diff
(99.5 %id)
AA488440   .a 1958 to 2588 627 to 1       627/627
(100 %)
4 diff
(99.4 %id)
AW673050 cervical carcinoma cell line, cervix .a 4249 to 4542 294 to 1   tiling clone,   294/294
(100 %)
2 diff
(99.4 %id)
CX865727 embryonic stem .a 4261 to 4540 306 to 27   AAA   280/291
(96 %)
2 diff
(99.4 %id)
NM_001135765.1   .b 1 to 8231 1 to 8231 exact RefSeq, AAA   8231/8231
(100 %)
0 diff
(100 %id)
BG721363 testis .b 98 to 864 1 to 767   tiling clone,   767/768
(99 %)
15 diff
(98.1 %id)
BI553880 brain, hippocampus .b 101 to 778 1 to 678   tiling clone,   678/678
(100 %)
2 diff
(99.8 %id)
AK293877 cerebellum .b 812 to 3762 1 to 2951   tiling clone,   2951/2951
(100 %)
0 diff
(100 %id)
DC308352 cerebellum .b 812 to 1359 1 to 548       548/548
(100 %)
0 diff
(100 %id)
DA661380   .b 1035 to 1590 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA875005 Prostate .b 1045 to 1606 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA334506 hippocampus .b 1101 to 1671 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
AU133213   .b 1102 to 1908 2 to 806   capped   805/853
(94 %)
6 diff
(99.3 %id)
DA758950   .b 1102 to 1647 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA810527 brain .b 1110 to 1647 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
BU181586 eye, retinoblastoma .b 1154 to 2007 1 to 856       856/856
(100 %)
2 diff
(99.8 %id)
DA850566 placenta .b 1199 to 1724 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DA764517 tongue .b 1244 to 1824 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA242304 brain .b 1257 to 1848 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
CN260027 embryonic stem cells, DMSO-treated H9 cellline .b 1269 to 1649 1 to 381       381/381
(100 %)
0 diff
(100 %id)
DA231398 brain .b 1279 to 1811 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA442683 tongue, tumor tissue .b 1364 to 1951 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA562874 heart .b 1377 to 1948 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA212547 brain .b 1409 to 1952 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
BM555252 duodenal adenocarcinoma, cell line, small intestine .b 1454 to 2433 1 to 992       992/1026
(96 %)
22 diff
(97.9 %id)
DA312263 hippocampus .b 1472 to 2023 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA356268 subthalamic nucleus .b 1536 to 2079 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA353840 substantia nigra .b 1549 to 2117 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA324898 hippocampus .b 1563 to 2117 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB140805 thymus .b 1573 to 2080 2 to 509   capped   508/508
(100 %)
0 diff
(100 %id)
AL046039 testis .b 1674 to 2418 1 to 746       746/749
(99 %)
21 diff
(97.2 %id)
DA762538 tongue .b 1696 to 2271 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
CD171603 testis .b 1727 to 2575 1 to 857       857/859
(99 %)
14 diff
(98.4 %id)
DA403029 thalamus .b 1728 to 2333 2 to 607   capped   606/606
(100 %)
0 diff
(100 %id)
BQ437500 eye, retinoblastoma .b 1752 to 2637 1 to 888       888/889
(99 %)
12 diff
(98.7 %id)
CA395151 eye, RPE/choroid .b 1785 to 2282 1 to 498       498/498
(100 %)
0 diff
(100 %id)
AA176925 muscle, skeletal muscle .b 1798 to 2095 1 to 295   fully sequenced,   295/295
(100 %)
0 diff
(100 %id)
DA318116 hippocampus .b 1841 to 2397 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
CN260024 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1842 to 2407 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DB073788 testis .b 1846 to 2392 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB047503 testis .b 1883 to 2444 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA821817 pericardium .b 1897 to 2443 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
CX870006 embryonic stem .b 1920 to 2523 1 to 604       604/604
(100 %)
0 diff
(100 %id)
DA579064   .b 1941 to 2497 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA573716   .b 1974 to 2515 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
AU125920   .b 2010 to 2876 2 to 870   capped   869/871
(99 %)
14 diff
(98.4 %id)
DA321644 hippocampus .b 2018 to 2578 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA765386 tongue .b 2046 to 2621 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
M86019   .b 2048 to 2427 1 to 380       380/380
(100 %)
0 diff
(100 %id)
AA176577 muscle, skeletal muscle .b 2065 to 2507 440 to 1   fully sequenced,   440/440
(100 %)
3 diff
(99.4 %id)
DA100832 cerebellum .b 2069 to 2653 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA940919 Spleen .b 2078 to 2610 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
BM695489 eye, optic nerve .b 2088 to 2800 1 to 709       709/720
(98 %)
6 diff
(99.2 %id)
CA390177 eye, RPE/choroid .b 2125 to 2700 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DA184840 amygdala .b 2155 to 2721 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA333272 hippocampus .b 2155 to 2700 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA400072 thalamus .b 2165 to 2700 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA278843 corpus callosum .b 2166 to 2719 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA244855 brain .b 2168 to 2735 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
CA950519 Pancreas, Purified pancreatic islet .b 2173 to 2741 1 to 569       569/569
(100 %)
0 diff
(100 %id)
DA536884 heart .b 2205 to 2700 2 to 497   capped   496/496
(100 %)
0 diff
(100 %id)
DA894255 skeletal muscle .b 2206 to 2758 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA031909   .b 2230 to 2791 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA561041 heart .b 2230 to 2795 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA564999 heart .b 2232 to 2786 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA398620 thalamus .b 2235 to 2794 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA398688 thalamus .b 2248 to 2790 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
CF552332 Pooled muscle (cardiac and skeletal) .b 2251 to 3072 1 to 826       826/840
(98 %)
9 diff
(99.0 %id)
DB241134 trachea .b 2308 to 2902 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA416672 thalamus .b 2371 to 2907 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA896589 skeletal muscle .b 2429 to 2983 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BM856829 stomach .b 2463 to 2835 1 to 373       373/373
(100 %)
0 diff
(100 %id)
BM462063 eye, retinoblastoma .b 2483 to 3341 1 to 861       861/1145
(75 %)
11 diff
(99.1 %id)
BM145742 leukopheresis .b 2515 to 3075 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DA209310 brain .b 2529 to 3095 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
CA394568 eye, RPE/choroid .b 2545 to 3089 1 to 545       545/546
(99 %)
0 diff
(100 %id)
DA415613 thalamus .b 2559 to 3187 2 to 630   capped   629/629
(100 %)
0 diff
(100 %id)
DB188796 liver, tumor tissue .b 2562 to 3118 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA970911 synovial membrane tissue from rheumatioidarthritis .b 2569 to 3074 2 to 507   capped   506/506
(100 %)
0 diff
(100 %id)
DA899803 skeletal muscle .b 2571 to 2943 2 to 374   capped   373/373
(100 %)
0 diff
(100 %id)
BQ937937 leiomyosarcoma, uterus .b 2576 to 3376 1 to 801       801/805
(99 %)
1 diff
(99.9 %id)
BQ631924 Pancreas, Purified pancreatic islet .b 2635 to 3269 1 to 635       635/635
(100 %)
0 diff
(100 %id)
TI_154162784   .b 2646 to 3475 80 to 921       842/1118
(75 %)
31 diff
(97.3 %id)
BQ216713 melanotic melanoma, skin .b 2648 to 3408 1 to 767       767/904
(84 %)
7 diff
(99.3 %id)
CN260026 embryonic stem cells, cell lines H1, H7, andH9 .b 2682 to 3060 1 to 379       379/379
(100 %)
0 diff
(100 %id)
DA489790 brain .b 2713 to 3289 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BQ067149 pooled brain, lung, testis .b 2714 to 3730 1 to 1021       1021/1073
(95 %)
13 diff
(98.8 %id)
BM823474 Ascites, stomach .b 2781 to 3423 1 to 643       643/643
(100 %)
0 diff
(100 %id)
DA494482 brain .b 2800 to 3349 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
CX757001 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 2903 to 3634 1 to 732     Submitted on the opposite strand 732/732
(100 %)
0 diff
(100 %id)
DA527087 brain .b 2914 to 3472 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
CN260012 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2948 to 3656 1 to 709       709/709
(100 %)
1 diff
(99.9 %id)
CV570733 cornea, eye .b 3009 to 3625 1 to 617       617/617
(100 %)
0 diff
(100 %id)
CX786221 human embryonic stem cells .b 3010 to 3789 1 to 780       780/780
(100 %)
0 diff
(100 %id)
DR157828 human embryonic stem cells differentiated toan early endodermal cell type .b 3015 to 3529 1 to 515       515/515
(100 %)
0 diff
(100 %id)
CX167094 human embryonic stem cells differentiated toan early endodermal cell type .b 3045 to 3762 1 to 718       718/718
(100 %)
0 diff
(100 %id)
CN260020 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 3047 to 3719 1 to 673       673/673
(100 %)
0 diff
(100 %id)
BM724888 eye, fetal eye .b 3116 to 3854 1 to 735       735/735
(100 %)
8 diff
(99.0 %id)
DA243755 brain .b 3195 to 3778 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA393078 thalamus .b 3206 to 3793 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
CA976191 sciatic nerve .b 3208 to 4108 7 to 912       906/918
(98 %)
17 diff
(98.2 %id)
DA183243 amygdala .b 3223 to 3762 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
M78207   .b 3236 to 3616 381 to 1       381/381
(100 %)
0 diff
(100 %id)
TI_154178653   .b 3242 to 4095 68 to 917       850/854
(99 %)
16 diff
(98.2 %id)
AW298146   .b 3245 to 3700 471 to 16   AAA   456/456
(100 %)
0 diff
(100 %id)
BM555876 duodenal adenocarcinoma, cell line, small intestine .b 3303 to 4142 1 to 839       839/1048
(80 %)
2 diff
(99.9 %id)
DA605230   .b 3325 to 3804 2 to 481   capped   480/480
(100 %)
0 diff
(100 %id)
F07066 brain, total brain .b 3342 to 3722 1 to 381       381/381
(100 %)
0 diff
(100 %id)
DA269465 caudate nucleus .b 3356 to 3999 2 to 645   capped   644/644
(100 %)
0 diff
(100 %id)
AU149483   .b 3364 to 3903 543 to 1       543/547
(99 %)
5 diff
(99.1 %id)
CN260016 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 3386 to 3758 1 to 373       373/373
(100 %)
0 diff
(100 %id)
DA305596 hippocampus .b 3411 to 3962 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA503772 brain .b 3437 to 3988 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BM932000 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 3536 to 3800 1 to 265   fully sequenced, AAA   265/265
(100 %)
0 diff
(100 %id)
BY994242   .b 3564 to 4273 1 to 710       710/710
(100 %)
0 diff
(100 %id)
BM685035 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 3653 to 3800 166 to 19   fully sequenced, AAA   148/148
(100 %)
0 diff
(100 %id)
DA310039 hippocampus .b 3697 to 4268 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
AU310122 neuroblastoma .b 3730 to 4309 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DA175386 amygdala .b 3737 to 4223 2 to 488   capped   487/487
(100 %)
0 diff
(100 %id)
DA312307 hippocampus .b 3749 to 4281 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
BM694098 eye, RPE and Choroid .b 3757 to 4037 1 to 281       281/281
(100 %)
0 diff
(100 %id)
DA070337 cerebellum .b 3760 to 4327 2 to 569   tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
BU679847 lung, Primary Lung Epithelial Cells .b 3772 to 4327 1 to 556   AAA Submitted on the opposite strand 556/564
(98 %)
5 diff
(99.2 %id)
DB066401 testis .b 3781 to 4223 2 to 444   capped   443/443
(100 %)
0 diff
(100 %id)
DA330916 hippocampus .b 3784 to 4323 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA687706   .b 3785 to 4320 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
AA281181 germinal center B cell .b 3788 to 4030 1 to 250   fully sequenced,   250/250
(100 %)
0 diff
(100 %id)
DB277938 uterus .b 3836 to 4397 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA363494 subthalamic nucleus .b 3838 to 4374 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
BM853525 Ascites, stomach .b 3842 to 4321 1 to 480       480/480
(100 %)
0 diff
(100 %id)
CB108057 Liver .b 3968 to 4417 1 to 450       450/450
(100 %)
0 diff
(100 %id)
AA281013 germinal center B cell .b 4000 to 4455 455 to 1   fully sequenced,   455/455
(100 %)
1 diff
(99.8 %id)
AU154584   .b 4017 to 4453 437 to 1       437/437
(100 %)
2 diff
(99.6 %id)
DA604193   .b 4063 to 4567 2 to 506   capped   505/505
(100 %)
0 diff
(100 %id)
DA414086 thalamus .b 4064 to 4621 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA224819 brain .b 4068 to 4642 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BQ632220 Pancreas, Purified pancreatic islet .b 4088 to 4464 379 to 3       377/379
(99 %)
0 diff
(100 %id)
DB217398 trachea .b 4125 to 4602 2 to 479   capped   478/478
(100 %)
0 diff
(100 %id)
DB216225 trachea .b 4148 to 4658 2 to 512   capped   511/511
(100 %)
0 diff
(100 %id)
CA950287 Pancreas, Purified pancreatic islet .b 4168 to 4460 294 to 1       294/298
(98 %)
1 diff
(99.7 %id)
BU732284 eye, RPE and Choroid .b 4168 to 4453 304 to 19   AAA   286/286
(100 %)
1 diff
(99.7 %id)
BM680123 eye, fetal eye .b 4168 to 4455 304 to 17   AAA   288/288
(100 %)
0 diff
(100 %id)
DA326859 hippocampus .b 4217 to 4852 2 to 637   tiling clone, capped   636/636
(100 %)
0 diff
(100 %id)
DA327343 hippocampus .b 4220 to 4778 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
F07680 brain, total brain .b 4263 to 4561 1 to 299       299/299
(100 %)
0 diff
(100 %id)
DA122932 cerebellum .b 4367 to 4866 2 to 501   capped   500/500
(100 %)
0 diff
(100 %id)
DA190835 amygdala .b 4389 to 4866 2 to 479   capped   478/478
(100 %)
0 diff
(100 %id)
DA800097 brain .b 4414 to 4962 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB165208 thymus .b 4451 to 5004 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB228706 trachea .b 4467 to 5062 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DB231321 trachea .b 4467 to 5025 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA334734 hippocampus .b 4559 to 5146 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA099287 cerebellum .b 4624 to 5106 2 to 484   capped   483/483
(100 %)
0 diff
(100 %id)
DA511595 brain .b 4637 to 5198 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA220747 brain .b 4642 to 5126 2 to 486   capped   485/485
(100 %)
0 diff
(100 %id)
DA337104 hippocampus .b 4716 to 5278 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA409828 thalamus .b 4784 to 5395 2 to 613   capped   612/612
(100 %)
0 diff
(100 %id)
DB216067 trachea .b 4786 to 5330 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA092240 cerebellum .b 4788 to 5361 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
AI299720 carcinoid, lung .b 4796 to 5216 1 to 421     Submitted on the opposite strand 421/421
(100 %)
0 diff
(100 %id)
CX785567 human embryonic stem cells .b 4842 to 5620 1 to 779   tiling clone,   779/779
(100 %)
0 diff
(100 %id)
CN289999 embryonic stem cells, DMSO-treated H9 cellline .b 4990 to 5531 1 to 542       542/542
(100 %)
0 diff
(100 %id)
DA192615 amygdala .b 5000 to 5598 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA576445   .b 5018 to 5566 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
CN278863 embryonic stem cells, cell lines H1, H7, andH9 .b 5021 to 5641 1 to 621       621/621
(100 %)
0 diff
(100 %id)
AA654832   .b 5021 to 5413 393 to 1       393/393
(100 %)
8 diff
(98.0 %id)
BQ691462 ductal carcinoma, cell line, Pancreas .b 5113 to 6025 1 to 929       929/948
(97 %)
22 diff
(97.7 %id)
DA588464 lung .b 5272 to 5842 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA497462 brain .b 5332 to 5871 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA441790 tongue, tumor tissue .b 5349 to 5913 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA678278   .b 5361 to 6095 2 to 735   capped   734/736
(99 %)
3 diff
(99.6 %id)
BE550755 carcinoid, lung .b 5366 to 5841 475 to 1       475/475
(100 %)
0 diff
(100 %id)
BE043078 carcinoid, lung .b 5407 to 5840 434 to 1       434/434
(100 %)
0 diff
(100 %id)
BF928522 nervous_tumor .b 5511 to 5909 412 to 13     Submitted on the opposite strand 400/489
(81 %)
0 diff
(100 %id)
BF928526 nervous_tumor .b 5511 to 5876 370 to 1     Submitted on the opposite strand 370/433
(85 %)
0 diff
(100 %id)
BU147261 dorsal root ganglia .b 5535 to 6420 1 to 896   tiling clone,   896/901
(99 %)
29 diff
(96.8 %id)
DA503735 brain .b 5559 to 6106 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA822744 pericardium .b 5584 to 6148 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BE907558 epithelioid carcinoma, Pancreas .b 5586 to 6205 1 to 620       620/621
(99 %)
1 diff
(99.9 %id)
CX868030 embryonic stem .b 5613 to 6207 1 to 595       595/595
(100 %)
0 diff
(100 %id)
BE740334 adenocarcinoma cell line, ovary .b 5652 to 6396 1 to 746       746/751
(99 %)
2 diff
(99.8 %id)
AK095382 tongue, tumor tissue .b 5656 to 8231 1 to 2576   tiling clone, available from FLJ,   2576/2576
(100 %)
0 diff
(100 %id)
AA227018 brain, neuroepithelial cells .b 5674 to 6063 1 to 390       390/390
(100 %)
0 diff
(100 %id)
AW880888 ovary .b 5691 to 6200 520 to 12       509/520
(97 %)
0 diff
(100 %id)
CR987796 T-Lymphocytes .b 5760 to 6628 1 to 869       869/869
(100 %)
2 diff
(99.8 %id)
DA662538   .b 5811 to 6338 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DA565618 heart .b 5851 to 6419 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA779875 brain .b 5956 to 6522 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA610285   .b 6064 to 6589 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DB034863 testis .b 6106 to 6687 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
BF737089 bladder_tumor .b 6120 to 6321 205 to 1     Submitted on the opposite strand 205/206
(99 %)
0 diff
(100 %id)
BM830540 Ascites, stomach .b 6122 to 6762 1 to 641       641/641
(100 %)
1 diff
(99.9 %id)
DA379116 thalamus .b 6154 to 6788 2 to 636   capped   635/635
(100 %)
0 diff
(100 %id)
AK000300   .b 6182 to 8231 1 to 2050   available from FLJ, AAA   2050/2050
(100 %)
1 diff
(100.0 %id)
DA525113 brain .b 6277 to 6833 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
CX783542 human embryonic stem cells .b 6429 to 7265 1 to 837       837/837
(100 %)
0 diff
(100 %id)
BQ358643 head_neck .b 6685 to 7021 346 to 6       341/346
(98 %)
0 diff
(100 %id)
BX099277 liver and spleen .b 6910 to 7711 1 to 803       803/805
(99 %)
2 diff
(99.8 %id)
CX761321 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 6918 to 7632 1 to 715     Submitted on the opposite strand 715/715
(100 %)
0 diff
(100 %id)
CK431113 eye, lacrimal gland .b 7047 to 7666 1 to 620       620/620
(100 %)
0 diff
(100 %id)
FN076677 breast carcinoma .b 7098 to 7156 59 to 1     Submitted on the opposite strand 59/59
(100 %)
0 diff
(100 %id)
CD677524 eye, Trabecular meshwork .b 7145 to 7801 1 to 657       657/657
(100 %)
0 diff
(100 %id)
CD677167 eye, Trabecular meshwork .b 7449 to 8085 1 to 637       637/637
(100 %)
0 diff
(100 %id)
TI_149279405   .b 7456 to 8115 743 to 84   AAA   660/700
(94 %)
0 diff
(100 %id)
BU678823 lung, Primary Lung Epithelial Cells .b 7456 to 8115 678 to 19   AAA   660/672
(98 %)
0 diff
(100 %id)
BF435003 fibrotheoma, ovary .b 7548 to 8110 563 to 1       563/563
(100 %)
0 diff
(100 %id)
BF435070 fibrotheoma, ovary .b 7551 to 8110 560 to 1       560/560
(100 %)
0 diff
(100 %id)
CX867949 embryonic stem .b 7620 to 8231 643 to 32   AAA   612/612
(100 %)
3 diff
(99.6 %id)
BU728904 eye, optic nerve .b 7622 to 8231 628 to 19   AAA   610/610
(100 %)
0 diff
(100 %id)
BM983152 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 7703 to 8115 431 to 19   AAA   413/413
(100 %)
0 diff
(100 %id)
AA226880 brain, neuroepithelial cells .b 7740 to 8110 371 to 1       371/371
(100 %)
3 diff
(99.2 %id)
F21919 pectoral muscle (after mastectomy) .b 7745 to 8104 1 to 360       360/360
(100 %)
0 diff
(100 %id)
F03943 brain, total brain .b 7833 to 8115 283 to 1       283/283
(100 %)
0 diff
(100 %id)
NM_001681.3   .c 1 to 4342 1 to 4342 exact RefSeq, AAA   4342/4342
(100 %)
0 diff
(100 %id)
M23115   .c 561 to 4342 1 to 3781   tiling clone,   3781/3781
(100 %)
1 diff
(100.0 %id)
BE968553 heart .c 2885 to 3579 1 to 701       701/751
(93 %)
25 diff
(96.7 %id)
CD516017 White Matter .c 2909 to 3677 1 to 776       776/922
(84 %)
18 diff
(98.1 %id)
BF574233 muscle (skeletal) .c 2981 to 3729 1 to 743       743/826
(89 %)
42 diff
(95.0 %id)
EB386770 eye, optic nerve .c 3019 to 3846 1 to 828       828/828
(100 %)
0 diff
(100 %id)
BF575734 muscle (skeletal) .c 3042 to 3689 1 to 637       637/821
(77 %)
29 diff
(96.5 %id)
BF670881 muscle (skeletal) .c 3073 to 3765 1 to 689       689/785
(87 %)
23 diff
(97.1 %id)
BF577172 muscle (skeletal) .c 3081 to 3715 1 to 623       623/625
(99 %)
32 diff
(94.9 %id)
BF576916 muscle (skeletal) .c 3085 to 3657 1 to 569       569/909
(62 %)
6 diff
(99.4 %id)
BF576192 muscle (skeletal) .c 3087 to 3662 1 to 574       574/869
(66 %)
16 diff
(98.2 %id)
BF694550 muscle (skeletal) .c 3102 to 3767 1 to 668       668/905
(73 %)
29 diff
(96.8 %id)
BF574809 muscle (skeletal) .c 3105 to 3677 1 to 575       575/759
(75 %)
16 diff
(97.9 %id)
BF693282 muscle (skeletal) .c 3110 to 3811 1 to 703       703/888
(79 %)
29 diff
(96.8 %id)
BF576819 muscle (skeletal) .c 3110 to 3791 1 to 676       676/789
(85 %)
37 diff
(95.4 %id)
BF671269 muscle (skeletal) .c 3124 to 3800 1 to 670       670/832
(80 %)
37 diff
(95.6 %id)
W65359 heart .c 3162 to 3635 1 to 475       475/475
(100 %)
1 diff
(99.8 %id)
BF694818 muscle (skeletal) .c 3165 to 3858 1 to 687       687/829
(82 %)
18 diff
(97.9 %id)
BF574238 muscle (skeletal) .c 3174 to 3891 1 to 717       717/834
(85 %)
23 diff
(97.3 %id)
BF672589 muscle (skeletal) .c 3184 to 3866 1 to 686       686/686
(100 %)
38 diff
(94.5 %id)
BF790326 muscle (skeletal) .c 3202 to 3854 1 to 669       628/881
(71 %)
55 diff
(93.8 %id)
BF790460 muscle (skeletal) .c 3203 to 3921 1 to 722       722/908
(79 %)
29 diff
(96.9 %id)
BF670536 muscle (skeletal) .c 3208 to 3885 1 to 668       668/898
(74 %)
16 diff
(98.3 %id)
BF575713 muscle (skeletal) .c 3219 to 3812 1 to 592       592/853
(69 %)
15 diff
(98.3 %id)
BF576006 muscle (skeletal) .c 3223 to 3919 1 to 700       697/845
(82 %)
33 diff
(96.1 %id)
BF576381 muscle (skeletal) .c 3226 to 3897 1 to 667       667/669
(99 %)
10 diff
(98.6 %id)
BF670979 muscle (skeletal) .c 3226 to 3924 1 to 681       681/687
(99 %)
44 diff
(93.6 %id)
BF672015 muscle (skeletal) .c 3279 to 3965 1 to 681       681/882
(77 %)
14 diff
(98.5 %id)
CD677151 eye, Trabecular meshwork .c 3282 to 3925 1 to 644       644/644
(100 %)
2 diff
(99.7 %id)
BF693290 muscle (skeletal) .c 3287 to 3970 1 to 694       694/830
(83 %)
38 diff
(95.5 %id)
BF790229 muscle (skeletal) .c 3331 to 4081 1 to 743       743/836
(88 %)
26 diff
(96.9 %id)
BF575263 muscle (skeletal) .c 3334 to 4019 1 to 678       678/897
(75 %)
35 diff
(96.1 %id)
BF671167 muscle (skeletal) .c 3343 to 3649 1 to 308       308/308
(100 %)
8 diff
(97.5 %id)
BF791267 muscle (skeletal) .c 3344 to 3993 1 to 647       647/877
(73 %)
10 diff
(98.9 %id)
F00488 leg muscle, skeletal muscle .c 3350 to 3566 1 to 217       217/304
(71 %)
1 diff
(99.7 %id)
BF576252 muscle (skeletal) .c 3353 to 4088 1 to 729       729/742
(98 %)
20 diff
(97.4 %id)
BF693949 muscle (skeletal) .c 3354 to 3983 1 to 628       628/883
(71 %)
23 diff
(97.4 %id)
BF790836 muscle (skeletal) .c 3355 to 3976 1 to 616       616/894
(68 %)
8 diff
(99.2 %id)
BQ940868 sciatic nerve .c 3355 to 4226 10 to 892       883/917
(96 %)
24 diff
(97.4 %id)
BQ954283 sciatic nerve .c 3358 to 4228 1 to 875       875/878
(99 %)
19 diff
(97.9 %id)
BF576712 muscle (skeletal) .c 3362 to 3993 1 to 622       622/894
(69 %)
37 diff
(95.9 %id)
BF575123 muscle (skeletal) .c 3363 to 4010 1 to 650       650/745
(87 %)
11 diff
(98.6 %id)
F00900 leg muscle, skeletal muscle .c 3372 to 3683 1 to 326       326/335
(97 %)
19 diff
(94.4 %id)
BF672030 muscle (skeletal) .c 3376 to 3968 1 to 596       596/875
(68 %)
16 diff
(98.2 %id)
BF670566 muscle (skeletal) .c 3380 to 3945 1 to 559       559/870
(64 %)
11 diff
(98.8 %id)
BF672215 muscle (skeletal) .c 3380 to 3889 1 to 508       508/508
(100 %)
3 diff
(99.5 %id)
BF693799 muscle (skeletal) .c 3391 to 4146 1 to 769       769/953
(80 %)
42 diff
(95.6 %id)
BF670254 muscle (skeletal) .c 3398 to 4114 1 to 713       713/810
(88 %)
19 diff
(97.7 %id)
BF126345 Liver .c 3403 to 4052 1 to 641       641/643
(99 %)
14 diff
(97.9 %id)
W19075 lung .c 3404 to 3794 1 to 392       392/456
(85 %)
6 diff
(98.7 %id)
BF576779 muscle (skeletal) .c 3407 to 4133 1 to 725       725/771
(94 %)
26 diff
(96.7 %id)
CD678630 eye, Trabecular meshwork .c 3408 to 4032 1 to 625       625/625
(100 %)
0 diff
(100 %id)
AA192119 muscle, skeletal muscle .c 3410 to 3810 1 to 409       409/411
(99 %)
13 diff
(96.9 %id)
BF671814 muscle (skeletal) .c 3418 to 4144 1 to 716       716/860
(83 %)
30 diff
(96.6 %id)
BF693321 muscle (skeletal) .c 3419 to 4065 1 to 639       639/873
(73 %)
28 diff
(96.8 %id)
AA095147   .c 3423 to 3663 1 to 241       241/245
(98 %)
5 diff
(98.0 %id)
BF573933 muscle (skeletal) .c 3435 to 4093 1 to 658       658/880
(74 %)
44 diff
(95.0 %id)
BF694824 muscle (skeletal) .c 3436 to 4137 1 to 695       695/811
(85 %)
16 diff
(98.1 %id)
CD679572 eye, Trabecular meshwork .c 3444 to 4056 1 to 614       614/614
(100 %)
2 diff
(99.7 %id)
BF574625 muscle (skeletal) .c 3450 to 4161 1 to 702       702/891
(78 %)
16 diff
(98.3 %id)
BF693930 muscle (skeletal) .c 3452 to 4086 1 to 637       637/1225
(52 %)
37 diff
(97.0 %id)
BE929891 placenta_normal .c 3472 to 3878 407 to 1       407/407
(100 %)
3 diff
(99.3 %id)
AI018405   .c 3480 to 4062 584 to 1       584/584
(100 %)
5 diff
(99.2 %id)
CD677016 eye, Trabecular meshwork .c 3497 to 4140 1 to 644       644/644
(100 %)
0 diff
(100 %id)
BE968623 heart .c 3498 to 4186 1 to 686       686/688
(99 %)
17 diff
(97.6 %id)
BU569463 testis .c 3510 to 4227 1 to 719   tiling clone,   719/727
(98 %)
5 diff
(99.4 %id)
W65324 heart .c 3515 to 3969 1 to 462   fully sequenced,   462/462
(100 %)
10 diff
(97.9 %id)
N85769   .c 3515 to 3790 1 to 267       267/267
(100 %)
16 diff
(94.1 %id)
BU561159 testis .c 3525 to 4193 1 to 659       659/733
(89 %)
18 diff
(97.6 %id)
AA192692 muscle, skeletal muscle .c 3923 to 4342 416 to 1       416/459
(90 %)
9 diff
(98.1 %id)
W61254 heart .c 3929 to 4342 425 to 1       425/425
(100 %)
11 diff
(97.5 %id)
W61297 heart .c 3939 to 4342 409 to 1   fully sequenced,   409/409
(100 %)
8 diff
(98.1 %id)
N90747 lung .c 4006 to 4340 335 to 1       335/340
(98 %)
6 diff
(98.3 %id)
DC333851 hippocampus .d 1 to 529 1 to 529   tiling clone,   529/529
(100 %)
0 diff
(100 %id)
DC323511 brain .d 82 to 557 1 to 476   tiling clone,   476/487
(97 %)
3 diff
(99.4 %id)
DC425913 hippocampus .d 3536 to 3957 422 to 1   tiling clone,   422/422
(100 %)
2 diff
(99.6 %id)
DA339672 hippocampus .e 1 to 607 2 to 608   tiling clone, capped   607/607
(100 %)
0 diff
(100 %id)
CA975888 sciatic nerve .e 33 to 939 12 to 933 I186N G187W E188R V189K H190C ... tiling clone,   922/936
(98 %)
45 diff
(95.2 %id)
BG773489 testis .f-u 1 to 603 1 to 602   tiling clone,   602/603
(99 %)
11 diff
(98.2 %id)
BG717310 testis .f-u 27 to 765 1 to 744       744/1157
(64 %)
27 diff
(97.7 %id)
CN260021 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f-u 149 to 492 1 to 344       344/344
(100 %)
0 diff
(100 %id)
CN260025 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f-u 155 to 457 1 to 303       303/303
(100 %)
2 diff
(99.4 %id)
AI671237 pooled germ cell tumors .f-u 181 to 538 358 to 1       358/358
(100 %)
1 diff
(99.8 %id)
BM924379 pooled colon, kidney, stomach .f-u 186 to 541 1 to 356   tiling clone,   356/356
(100 %)
0 diff
(100 %id)
BE465242 Kidney .f-u 217 to 548 332 to 1       332/332
(100 %)
2 diff
(99.4 %id)
AI916156 colon, colon tumor, RER+ .f-u 223 to 549 327 to 1   tiling clone,   327/327
(100 %)
3 diff
(99.1 %id)
AI761339 colon, colon tumor, RER+ .f-u 230 to 531 302 to 1       302/302
(100 %)
2 diff
(99.4 %id)
AW453088   .f-u 543 to 699 1 to 157     Submitted on the opposite strand 157/181
(86 %)
1 diff
(99.5 %id)
BF513557   .f-u 543 to 1011 1 to 469     Submitted on the opposite strand 469/469
(100 %)
1 diff
(99.8 %id)
BF516525   .f-u 543 to 699 1 to 157     Submitted on the opposite strand 157/181
(86 %)
1 diff
(99.5 %id)
BF194756 fibrotheoma, ovary .f-u 544 to 1068 1 to 525   tiling clone, Submitted on the opposite strand 525/525
(100 %)
0 diff
(100 %id)
TI_157610633   .g 1 to 734 59 to 788 L112M tiling clone, Submitted on the opposite strand 730/1071
(68 %)
31 diff
(97.2 %id)
AI091365 pooled .g 26 to 496 1 to 471   tiling clone, Submitted on the opposite strand 471/471
(100 %)
2 diff
(99.6 %id)
R53737 placenta .g 505 to 896 399 to 1   tiling clone, Submitted on the opposite strand 399/399
(100 %)
10 diff
(97.5 %id)
BG998018 head_neck .g 575 to 943 1 to 367   tiling clone,   367/367
(100 %)
8 diff
(97.9 %id)
CV361068 head_neck .g 659 to 1051 54 to 444   tiling clone,   391/453
(86 %)
13 diff
(97.2 %id)
BX648282 human cervix .h 1 to 5572 1 to 5572 exact tiling clone, available from DKFZ, AAA   5572/5572
(100 %)
0 diff
(100 %id)
BF890985 marrow .h 29 to 507 530 to 53     Submitted on the opposite strand 478/530
(90 %)
0 diff
(100 %id)
AL117505 testis .h 3825 to 5572 1 to 1748   available from DKFZ, AAA   1748/1748
(100 %)
0 diff
(100 %id)
Z42600 brain, total brain .h 3950 to 4232 1 to 282       282/282
(100 %)
2 diff
(99.3 %id)
N42649 melanocyte .h 3965 to 4376 1 to 412       412/413
(99 %)
4 diff
(99.1 %id)
BM722638 eye, fetal eye .h 4318 to 4933 1 to 616       616/616
(100 %)
0 diff
(100 %id)
BC065753 skeletal muscle .h 4425 to 5572 4 to 1151   available from MGC, AAA   1148/1148
(100 %)
2 diff
(99.9 %id)
TI_154107601   .h 4677 to 5572 964 to 80   AAA   885/979
(90 %)
22 diff
(97.8 %id)
TI_154032464   .h 4697 to 5572 922 to 62   AAA   861/937
(91 %)
22 diff
(97.7 %id)
TI_149299467   .h 4705 to 5572 953 to 92   AAA   862/981
(87 %)
17 diff
(98.3 %id)
TI_159723689   .h 4723 to 5572 936 to 91   AAA   846/1009
(83 %)
16 diff
(98.5 %id)
BU177876 melanotic melanoma, skin .h 4738 to 5536 24 to 826   AAA   803/903
(88 %)
16 diff
(98.3 %id)
TI_149286036   .h 4752 to 5572 885 to 63   AAA   823/828
(99 %)
30 diff
(96.4 %id)
AI762976 B-cell, chronic lymphotic leukemia .h 4793 to 5573 778 to 1       778/778
(100 %)
18 diff
(97.7 %id)
BM975793 lung, Primary Lung Cystic Fibrosis EpithelialCells .h 4807 to 5572 783 to 17   AAA   767/767
(100 %)
3 diff
(99.7 %id)
CA945205 Human Lung Epithelial cells, lung .h 4819 to 5572 769 to 17   AAA   753/753
(100 %)
5 diff
(99.4 %id)
TI_149280814   .h 4820 to 5572 830 to 78   AAA   753/827
(91 %)
1 diff
(99.9 %id)
CA443023 Fibrosarcoma .h 4825 to 5572 764 to 17   AAA   748/749
(99 %)
2 diff
(99.8 %id)
BF531038 anaplastic oligodendroglioma with 1p/19qloss, brain .h 4835 to 5572 1 to 738   AAA   738/738
(100 %)
4 diff
(99.5 %id)
AI750044 colon .h 4845 to 5572 743 to 19   AAA   725/725
(100 %)
10 diff
(98.7 %id)
CD678570 eye, Trabecular meshwork .h 4855 to 5484 1 to 630       630/630
(100 %)
0 diff
(100 %id)
BF672075 muscle (skeletal) .h 4858 to 5483 1 to 627       627/627
(100 %)
6 diff
(99.1 %id)
CA447073 Chondrosarcoma, Left Pelvis .h 4863 to 5572 726 to 17   AAA   710/710
(100 %)
2 diff
(99.8 %id)
BF126356 Liver .h 4871 to 5507 1 to 639       639/641
(99 %)
13 diff
(98.0 %id)
TI_154134524   .h 4875 to 5572 783 to 91   AAA   693/1112
(62 %)
25 diff
(97.8 %id)
AI830231 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .h 4885 to 5575 693 to 6       688/693
(99 %)
0 diff
(100 %id)
BM969975 lung, Primary Lung Epithelial Cells .h 4886 to 5572 703 to 17   AAA   687/687
(100 %)
0 diff
(100 %id)
N42078 melanocyte .h 4890 to 5260 1 to 373   fully sequenced,   373/373
(100 %)
0 diff
(100 %id)
AI885831 anaplastic oligodendroglioma, brain .h 4891 to 5574 682 to 1       682/688
(99 %)
7 diff
(99.0 %id)
N40435 melanocyte .h 4918 to 5232 1 to 323   fully sequenced,   323/323
(100 %)
0 diff
(100 %id)
BU934864 mixed (pool of 40 RNAs) .h 4922 to 5570 1 to 649       649/831
(78 %)
12 diff
(98.6 %id)
W28905 eye, retina .h 4971 to 5559 606 to 23       584/652
(89 %)
0 diff
(100 %id)
BM679277 eye, fetal eye .h 4978 to 5572 611 to 17   AAA   595/595
(100 %)
0 diff
(100 %id)
BF446196 Prostate .h 4999 to 5572 574 to 1       574/574
(100 %)
0 diff
(100 %id)
BM931324 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h 5017 to 5572 1 to 556   fully sequenced, AAA   556/556
(100 %)
0 diff
(100 %id)
AA640433 alveolar rhabdomyosarcoma .h 5058 to 5570 513 to 1       513/513
(100 %)
31 diff
(94.0 %id)
TI_149305989   .h 5062 to 5572 597 to 88   AAA   510/518
(98 %)
4 diff
(99.3 %id)
BI493768 cochlea, ear .h 5066 to 5572 8 to 514   AAA   507/514
(98 %)
0 diff
(100 %id)
BU580528 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .h 5071 to 5572 502 to 1       502/502
(100 %)
0 diff
(100 %id)
BU686170 lung, Primary Lung Epithelial Cells .h 5071 to 5572 518 to 17   AAA   502/502
(100 %)
0 diff
(100 %id)
AL048132 uterus .h 5081 to 5575 498 to 5       494/502
(98 %)
0 diff
(100 %id)
AI859066 anaplastic oligodendroglioma, brain .h 5085 to 5572 488 to 1       488/488
(100 %)
0 diff
(100 %id)
AJ710716 heart .h 5088 to 5575 488 to 2     Submitted on the opposite strand 487/488
(99 %)
0 diff
(100 %id)
BF446133 Prostate .h 5093 to 5572 480 to 1       480/480
(100 %)
0 diff
(100 %id)
CD678051 eye, Trabecular meshwork .h 5097 to 5155 1 to 59   fully sequenced,   59/59
(100 %)
0 diff
(100 %id)
CD677457 eye, Trabecular meshwork .h 5102 to 5569 1 to 468       468/468
(100 %)
0 diff
(100 %id)
BE049545 adenocarcinoma, Pancreas .h 5109 to 5579 472 to 1       472/478
(98 %)
7 diff
(98.6 %id)
CD678050 eye, Trabecular meshwork .h 5125 to 5572 471 to 24   fully sequenced, AAA   448/448
(100 %)
0 diff
(100 %id)
AI750236 Bone, Hip .h 5130 to 5546 425 to 9       417/425
(98 %)
0 diff
(100 %id)
N32965 melanocyte .h 5153 to 5581 432 to 1       432/433
(99 %)
4 diff
(99.1 %id)
AA019144 eye, retina .h 5158 to 5570 414 to 1     Submitted on the opposite strand 414/414
(100 %)
2 diff
(99.6 %id)
N26073 melanocyte .h 5202 to 5572 371 to 1   fully sequenced,   371/371
(100 %)
1 diff
(99.8 %id)
TI_159714721   .h 5221 to 5572 442 to 91   AAA   352/1001
(35 %)
0 diff
(100 %id)
F29580 pectoral muscle (after mastectomy) .h 5224 to 5572 1 to 349   AAA   349/349
(100 %)
0 diff
(100 %id)
F30108 pectoral muscle (after mastectomy) .h 5225 to 5496 1 to 272       272/272
(100 %)
0 diff
(100 %id)
N33021 melanocyte .h 5230 to 5572 345 to 1   fully sequenced,   345/345
(100 %)
1 diff
(99.8 %id)
H85819 eye, retina .h 5231 to 5571 343 to 1     Submitted on the opposite strand 343/349
(98 %)
6 diff
(98.3 %id)
BG370203 adenocarcinoma, Pancreas .h 5231 to 5579 349 to 1       349/349
(100 %)
0 diff
(100 %id)
AA496781.
matches multiple genes
  .h 5234 to 5572 339 to 1     also hits gene PLCG1 339/339
(100 %)
0 diff
(100 %id)
F00011 leg muscle, skeletal muscle .h 5277 to 5572 314 to 16   AAA   299/302
(99 %)
4 diff
(98.7 %id)
BM684889 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h 5279 to 5572 310 to 17   fully sequenced, AAA   294/294
(100 %)
0 diff
(100 %id)
F24346 pectoral muscle (after mastectomy) .h 5306 to 5547 1 to 242       242/242
(100 %)
0 diff
(100 %id)
AW956102   .h 5308 to 5559 252 to 1     Submitted on the opposite strand 252/252
(100 %)
8 diff
(96.9 %id)
F02111 brain, total brain .h 5319 to 5572 254 to 1       254/254
(100 %)
0 diff
(100 %id)
AA662321 alveolar rhabdomyosarcoma .h 5385 to 5570 186 to 1       186/186
(100 %)
2 diff
(99.0 %id)
T03469   .h 5433 to 5575 143 to 1       143/147
(97 %)
2 diff
(98.7 %id)
AW578535 colon .i 1 to 627 12 to 638 N104K A105C C106L N107Q S108L ... tiling clone,   627/638
(98 %)
11 diff
(98.3 %id)
AA704546 liver and spleen .j-u -10 to 518 526 to 1 C2A I3* tiling clone,   526/526
(100 %)
9 diff
(98.3 %id)
DB140655 thymus .k 1 to 540 2 to 542 L17P F18L R20P Y21L A23G ... tiling clone, capped   541/541
(100 %)
2 diff
(99.7 %id)
DA568897 whole embryo, mainly head .l 1 to 760 2 to 761 exact tiling clone, capped   760/760
(100 %)
3 diff
(99.7 %id)
F07683 brain, total brain .l 5 to 305 1 to 301 Y6X F18X K29X K36X tiling clone,   301/301
(100 %)
1 diff
(99.7 %id)
BM720796 eye, fetal eye .l 201 to 753 1 to 553   tiling clone, fully sequenced,   553/553
(100 %)
0 diff
(100 %id)
AW965608   .l 233 to 792 1 to 560       560/560
(100 %)
4 diff
(99.3 %id)
AV724956 hypothalamus .l 329 to 798 1 to 470       470/502
(93 %)
1 diff
(99.9 %id)
H19149 brain .l 370 to 850 1 to 489       489/489
(100 %)
14 diff
(97.2 %id)
F06307 brain, total brain .l 373 to 682 1 to 310       310/310
(100 %)
0 diff
(100 %id)
AI267701 brain, frontal lobe (see description) .l 395 to 860 20 to 485       466/485
(96 %)
9 diff
(98.2 %id)
F06597 brain, total brain .l 406 to 759 1 to 354       354/354
(100 %)
0 diff
(100 %id)
F11290 brain, total brain .l 511 to 839 1 to 329       329/329
(100 %)
1 diff
(99.7 %id)
CK003746 brain/CNS, Human Brain - Cerebellar Cortex .l 516 to 1184 1 to 665       665/667
(99 %)
9 diff
(98.7 %id)
M85712   .l 559 to 893 1 to 338       338/387
(87 %)
5 diff
(98.8 %id)
BM676899 eye, fetal eye .l 723 to 1358 654 to 19   tiling clone, fully sequenced, AAA   636/636
(100 %)
0 diff
(100 %id)
DB355470 whole embryo, mainly head .l 792 to 1353 562 to 1       562/562
(100 %)
2 diff
(99.7 %id)
F04948 brain, total brain .l 1084 to 1358 275 to 1       275/275
(100 %)
0 diff
(100 %id)
H18481 brain .l 1093 to 1474 389 to 1       389/390
(99 %)
12 diff
(97.0 %id)
F08951 brain, total brain .l 1125 to 1478 354 to 1       354/354
(100 %)
0 diff
(100 %id)
F02601 brain, total brain .l 1184 to 1474 291 to 1   tiling clone,   291/291
(100 %)
0 diff
(100 %id)
AW059819   .l 1395 to 1478 1 to 84       84/84
(100 %)
0 diff
(100 %id)
FN055084 breast carcinoma .l 1400 to 1471 76 to 5     Submitted on the opposite strand 72/76
(94 %)
0 diff
(100 %id)
DB276137 uterus .m-u 1 to 552 2 to 553 exact tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
BF773213 epid_tumor .n 1 to 124 140 to 14   tiling clone, Submitted on the opposite strand 127/140
(90 %)
0 diff
(100 %id)
BE708555 head_neck .n 120 to 466 353 to 6 exact tiling clone,   348/359
(96 %)
2 diff
(99.5 %id)
BG011840 placenta_normal .o-u 1 to 273 281 to 6 P50A V51S S52K G53W W54L ... tiling clone,   276/281
(98 %)
0 diff
(100 %id)
359 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i, .j-u, .k, .l, .m-u, .n, .o-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI