To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene ASXL2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
312 supporting clones for gene ASXL2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX647527 human cervix .a 1 to 7237 1 to 7240 S47R G48S T49G S50T P51S ... tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (19/21 A in genome downstream of last aligned base) 7240/7240
(100 %)
8 diff
(99.9 %id)
CR933613 endometrium carcinoma cell line .a 30 to 7237 1 to 7212 S47R G48S T49G S50T P51S ... AAA Possibly primed on the genome, locally A rich (19/21 A in genome downstream of last aligned base) 7212/7212
(100 %)
5 diff
(100.0 %id)
BX648218 human endometrium carcinoma cell line .a 49 to 8936 1 to 8891 S47R G48S T49G S50T P51S ... tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 8891/8891
(100 %)
15 diff
(99.9 %id)
BX473875   .a 51 to 382 9 to 339       331/339
(97 %)
6 diff
(98.3 %id)
AW967264   .a 60 to 434 1 to 375       375/394
(95 %)
7 diff
(98.3 %id)
AB051472 brain .a 74 to 5944 1 to 5874 S47R G48S T49G S50T P51S ... available from KIAA,   5874/5874
(100 %)
1 diff
(100.0 %id)
NM_018263.4   .a 74 to 7244 1 to 7174 S47R G48S T49G S50T P51S ... RefSeq,   7174/7174
(100 %)
1 diff
(100.0 %id)
CN274858 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 103 to 385 1 to 284       284/284
(100 %)
1 diff
(99.7 %id)
AB084279 bone marrow .a 211 to 7237 1 to 7030 S47R G48S T49G S50T P51S ...     7030/7030
(100 %)
1 diff
(100.0 %id)
BQ380524 uterus_tumor .a 345 to 613 283 to 12       271/330
(82 %)
1 diff
(99.7 %id)
AB084281 bone marrow .a 348 to 7237 2825 to 9718   tiling clone,   6896/9718
(70 %)
6 diff
(100.0 %id)
FJ230888   .a 433 to 4976 1663 to 6206   tiling clone,   4546/6206
(73 %)
6 diff
(100.0 %id)
BF908773 uterus_tumor .a 441 to 864 427 to 3     Submitted on the opposite strand 425/427
(99 %)
2 diff
(99.6 %id)
CV363221 breast_normal .a 823 to 1061 1 to 238       238/239
(99 %)
2 diff
(99.2 %id)
BF816101 colon_ins .a 893 to 1358 168 to 631       464/635
(73 %)
11 diff
(98.3 %id)
TI_1948207644   .a 1065 to 1965 123 to 1027       905/1250
(72 %)
21 diff
(98.4 %id)
TI_1948207645   .a 1065 to 2150 129 to 1215       1087/1288
(84 %)
51 diff
(96.1 %id)
TI_1948207892   .a 1065 to 2129 126 to 1197       1072/1259
(85 %)
76 diff
(94.0 %id)
TI_1948207893   .a 1065 to 2147 131 to 1203       1073/1273
(84 %)
36 diff
(97.2 %id)
TI_1948208164   .a 1065 to 2147 131 to 1219       1089/1290
(84 %)
39 diff
(97.0 %id)
TI_1948208413   .a 1065 to 2073 115 to 1118       1004/1227
(81 %)
42 diff
(96.6 %id)
TI_1948208414   .a 1065 to 2060 128 to 1126       999/1310
(76 %)
39 diff
(97.1 %id)
EL733908 mixed .a 1072 to 1775 1 to 703       703/703
(100 %)
3 diff
(99.6 %id)
CN482374 eye .a 1380 to 1976 1 to 597       597/597
(100 %)
0 diff
(100 %id)
BF809650 colon_ins .a 1391 to 1786 1 to 396       396/396
(100 %)
11 diff
(97.3 %id)
BQ378715 uterus_tumor .a 1432 to 1961 19 to 548       530/548
(96 %)
6 diff
(99.0 %id)
BQ338970 nervous_normal .a 1447 to 1825 23 to 402       380/402
(94 %)
6 diff
(98.6 %id)
EH342372   .a 1751 to 1817 1 to 67       67/67
(100 %)
0 diff
(100 %id)
EH350547   .a 1772 to 1847 1 to 76       76/76
(100 %)
0 diff
(100 %id)
BX474056   .a 2570 to 3167 9 to 606       598/606
(98 %)
6 diff
(99.1 %id)
BF750578 breast_normal .a 2660 to 2990 8 to 337       330/369
(89 %)
4 diff
(99.0 %id)
BF798170 colon_ins .a 2660 to 3327 29 to 695       667/696
(95 %)
13 diff
(98.2 %id)
DA327560 hippocampus .a 2693 to 3254 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
AK001760   .a 2958 to 7237 1 to 4281   available from FLJ,   4281/4281
(100 %)
6 diff
(99.9 %id)
AU133465   .a 2959 to 3788 2 to 828   capped   827/827
(100 %)
6 diff
(99.3 %id)
DA318311 hippocampus .a 3047 to 3639 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
CD629138   .a 3068 to 3768 1 to 701       701/701
(100 %)
5 diff
(99.3 %id)
CD629140   .a 3068 to 3823 1 to 755       755/763
(98 %)
15 diff
(98.1 %id)
CD629142   .a 3068 to 3805 1 to 741       741/741
(100 %)
8 diff
(99.0 %id)
CD629144   .a 3068 to 3796 1 to 728       728/728
(100 %)
7 diff
(99.1 %id)
CD629146   .a 3068 to 3786 1 to 719       719/719
(100 %)
6 diff
(99.2 %id)
CD629148   .a 3068 to 3782 1 to 714       714/714
(100 %)
9 diff
(98.8 %id)
CD629150   .a 3068 to 3823 1 to 757       757/762
(99 %)
10 diff
(98.7 %id)
CD629152   .a 3068 to 3693 1 to 631       631/636
(99 %)
11 diff
(98.3 %id)
CD629154   .a 3068 to 3776 1 to 708       708/708
(100 %)
9 diff
(98.8 %id)
CD629156   .a 3068 to 3724 1 to 660       660/660
(100 %)
8 diff
(98.8 %id)
DA299153 hippocampus .a 3181 to 3728 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
CN255589 embryonic stem cells, DMSO-treated H9 cellline .a 3191 to 3817 1 to 628       628/628
(100 %)
1 diff
(99.9 %id)
DB219724 trachea .a 3233 to 3784 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
BX474837   .a 3300 to 3878 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
DA211001 brain .a 3345 to 3717 2 to 374   capped   373/373
(100 %)
1 diff
(99.8 %id)
AA852413 Bone, Hip .a 3486 to 3785 1 to 300       300/300
(100 %)
5 diff
(98.4 %id)
BG119749 adenocarcinoma, cell line, Liver .a 3518 to 4189 1 to 685       685/993
(68 %)
36 diff
(96.4 %id)
CD629159   .a 3546 to 4002 1 to 462       462/471
(98 %)
12 diff
(97.5 %id)
TI_1948207646   .a 3563 to 4598 1155 to 128       1028/1234
(83 %)
0 diff
(100 %id)
TI_1948208416   .a 3564 to 4598 1158 to 127       1032/1307
(78 %)
0 diff
(100 %id)
TI_1948207894   .a 3572 to 4598 1149 to 128       1022/1226
(83 %)
0 diff
(100 %id)
TI_1948207895   .a 3582 to 4598 1136 to 131       1006/1299
(77 %)
0 diff
(100 %id)
TI_1948208415   .a 3590 to 4598 1141 to 127       1015/1265
(80 %)
0 diff
(100 %id)
TI_1948208165   .a 3607 to 4598 1135 to 128       1008/1289
(78 %)
0 diff
(100 %id)
CN255590 embryonic stem cells, cell lines H1, H7, andH9 .a 3743 to 4417 1 to 675       675/675
(100 %)
0 diff
(100 %id)
DA501257 brain .a 3743 to 4190 2 to 449   capped   448/448
(100 %)
1 diff
(99.8 %id)
BG535147 lung .a 3768 to 4191 1 to 424       424/886
(47 %)
2 diff
(99.8 %id)
BX498174 Liver .a 3781 to 4170 1 to 390       390/390
(100 %)
0 diff
(100 %id)
TI_149312168   .a 3788 to 4709 999 to 95   AAA   905/972
(93 %)
19 diff
(98.1 %id)
CN255588 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3876 to 4564 1 to 690       690/690
(100 %)
2 diff
(99.8 %id)
TI_1948208166   .a 3910 to 4598 836 to 135       702/1464
(47 %)
0 diff
(100 %id)
BM977788 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 4022 to 4709 707 to 19   AAA   689/689
(100 %)
1 diff
(99.9 %id)
DA806951 brain .a 4086 to 4645 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
CN255591 embryonic stem cells, cell lines H1, H7, andH9 .a 4298 to 4851 1 to 554       554/554
(100 %)
0 diff
(100 %id)
AA588157 colon, colon tumor RER+ .a 4357 to 4703 353 to 7       347/353
(98 %)
0 diff
(100 %id)
AI917598 colon, colon tumor, RER+ .a 4474 to 4588 115 to 1       115/115
(100 %)
1 diff
(99.2 %id)
BX641247   .a 4558 to 5271 1 to 712       712/712
(100 %)
1 diff
(99.9 %id)
AA013342 eye, retina .a 4688 to 5007 1 to 323       323/323
(100 %)
5 diff
(98.5 %id)
AA018380 eye, retina .a 4688 to 4989 1 to 303       303/303
(100 %)
3 diff
(99.1 %id)
AA017284 eye, retina .a 4688 to 5138 1 to 454       454/454
(100 %)
6 diff
(98.7 %id)
AA056996 eye, retina .a 4688 to 4910 1 to 223       223/226
(98 %)
1 diff
(99.6 %id)
BP239290 Liver .a 4759 to 5308 1 to 550       550/550
(100 %)
6 diff
(99.0 %id)
BP242063 Liver .a 4799 to 5373 1 to 575       575/575
(100 %)
5 diff
(99.2 %id)
FN149017 breast carcinoma .a 4923 to 5037 117 to 1     Submitted on the opposite strand 117/117
(100 %)
2 diff
(98.3 %id)
BP376938 uterus .a 4952 to 5535 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BE154099 head_neck .a 5043 to 5326 293 to 12     Submitted on the opposite strand 282/293
(96 %)
0 diff
(100 %id)
AA234387 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 5154 to 5505 1 to 352       352/483
(72 %)
1 diff
(99.8 %id)
BP238966 Liver .a 5178 to 5796 1 to 617       617/617
(100 %)
9 diff
(98.6 %id)
DA603283   .a 5180 to 5996 2 to 821   capped   820/820
(100 %)
9 diff
(99.0 %id)
AA503914 Prostate .a 5182 to 5434 262 to 10       253/272
(93 %)
0 diff
(100 %id)
AL705671 human skeletal muscle .a 5188 to 5820 1 to 632       632/632
(100 %)
4 diff
(99.4 %id)
DA632536 Kidney .a 5257 to 5836 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BE926871 breast .a 5340 to 5786 460 to 16       445/466
(95 %)
0 diff
(100 %id)
BE926880 breast .a 5340 to 5785 456 to 11       446/461
(96 %)
0 diff
(100 %id)
AA453371   .a 5353 to 5847 16 to 510       495/510
(97 %)
6 diff
(98.9 %id)
BP222665   .a 5462 to 6036 1 to 575       575/575
(100 %)
0 diff
(100 %id)
BP269389 thyroid .a 5473 to 6052 1 to 580       580/580
(100 %)
3 diff
(99.5 %id)
BG250239 adenocarcinoma, cell line, Liver .a 5492 to 6175 1 to 672       672/896
(75 %)
25 diff
(97.3 %id)
BM725770 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5648 to 6252 1 to 605     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 605/605
(100 %)
0 diff
(100 %id)
AI304650 adenocarcinoma, colon .a 5661 to 6089 439 to 11   AAA   429/429
(100 %)
0 diff
(100 %id)
AI343912 adenocarcinoma, colon .a 5661 to 6089 439 to 11   AAA   429/429
(100 %)
0 diff
(100 %id)
AA907848 pooled .a 5703 to 6096 397 to 4       394/397
(99 %)
0 diff
(100 %id)
C75292   .a 5715 to 6145 10 to 437       428/438
(97 %)
5 diff
(98.9 %id)
AU119844 whole embryo, mainly head .a 5775 to 6597 2 to 826   capped   825/825
(100 %)
15 diff
(98.2 %id)
BY995161   .a 5787 to 6485 10 to 708       699/708
(98 %)
6 diff
(99.2 %id)
BX280169 embryonal carcinoma, cell line, testis .a 6006 to 6505 1 to 500       500/500
(100 %)
0 diff
(100 %id)
BQ436592 embryonal carcinoma, cell line, testis .a 6007 to 7113 1 to 1109       1109/1110
(99 %)
37 diff
(96.7 %id)
BM451199 eye, retinoblastoma .a 6011 to 6811 1 to 810       810/899
(90 %)
32 diff
(96.5 %id)
BP272065   .a 6014 to 6616 1 to 603       603/603
(100 %)
7 diff
(98.9 %id)
AK000649   .a 6015 to 7237 1 to 1223   available from FLJ, AAA Possibly primed on the genome, locally A rich (19/21 A in genome downstream of last aligned base) 1223/1223
(100 %)
2 diff
(99.9 %id)
H47433 liver and spleen .a 6064 to 6505 1 to 459       459/509
(90 %)
16 diff
(96.9 %id)
CB142228 Liver .a 6090 to 6509 1 to 421       421/421
(100 %)
1 diff
(99.8 %id)
BU160081 leiomyosarcoma, uterus .a 6107 to 6989 1 to 892       892/897
(99 %)
26 diff
(97.2 %id)
CD629160   .a 6162 to 6683 1 to 531       531/548
(96 %)
26 diff
(95.3 %id)
CD629161   .a 6168 to 6685 530 to 14       517/536
(96 %)
0 diff
(100 %id)
H83722 melanocyte .a 6252 to 6627 1 to 381       381/382
(99 %)
8 diff
(98.0 %id)
BP274481 Kidney .a 6265 to 6607 1 to 343       343/584
(58 %)
5 diff
(99.2 %id)
FN161654 breast carcinoma .a 6278 to 6359 81 to 1     Submitted on the opposite strand 81/81
(100 %)
1 diff
(98.8 %id)
CX783341 human embryonic stem cells .a 6288 to 7120 1 to 833   fully sequenced, Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 833/833
(100 %)
0 diff
(100 %id)
R62674 placenta .a 6319 to 6746 1 to 445       445/451
(98 %)
25 diff
(94.5 %id)
BX437064 thymus .a 6349 to 7266 10 to 919       910/918
(99 %)
14 diff
(98.5 %id)
BP292820 lung .a 6400 to 6981 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BG286421 bladder, transitional cell papilloma, cell line .a 6420 to 6763 400 to 738       679/968
(70 %)
40 diff
(95.9 %id)
BM311980 Pancreas, Purified pancreatic islet .a 6423 to 7016 11 to 604       594/604
(98 %)
5 diff
(99.2 %id)
BE886570 leiomyosarcoma, uterus .a 6430 to 6847 174 to 585       517/666
(77 %)
34 diff
(94.9 %id)
AI147402   .a 6436 to 6932 1 to 497     Submitted on the opposite strand 497/497
(100 %)
0 diff
(100 %id)
DA747318   .a 6437 to 6993 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BF514286   .a 6443 to 6968 11 to 535     Submitted on the opposite strand 525/535
(98 %)
6 diff
(98.9 %id)
DA279891 corpus callosum .a 6452 to 7017 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
TI_154103473   .a 6453 to 7244 872 to 84   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 789/985
(80 %)
10 diff
(99.0 %id)
W69314 heart .a 6483 to 6884 1 to 413   fully sequenced,   413/413
(100 %)
7 diff
(98.4 %id)
CK725130 Chondrosarcoma, Left Pubic Bone .a 6487 to 7244 774 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 756/756
(100 %)
2 diff
(99.8 %id)
BG272320 nasopharynx, normal epithelium .a 6498 to 6713 1 to 217       217/251
(86 %)
9 diff
(96.5 %id)
AA279624 germinal center B cell .a 6502 to 6692 1 to 191       191/191
(100 %)
4 diff
(98.0 %id)
BG035982 adenocarcinoma, cell line, Liver .a 6503 to 7167 1 to 665       665/665
(100 %)
11 diff
(98.4 %id)
T81859 liver and spleen .a 6511 to 6889 1 to 399   fully sequenced,   399/399
(100 %)
22 diff
(94.5 %id)
T83622 liver and spleen .a 6511 to 6591 1 to 81       81/86
(94 %)
3 diff
(96.6 %id)
BU740621 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 6533 to 7244 727 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 709/709
(100 %)
3 diff
(99.6 %id)
BM992125 Bone, Subchondral Bone .a 6535 to 7244 728 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 710/710
(100 %)
2 diff
(99.8 %id)
BQ025361 placenta .a 6565 to 7244 695 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 677/677
(100 %)
3 diff
(99.6 %id)
CA312217 Human Lung Epithelial cells, lung .a 6567 to 7250 683 to 1       683/687
(99 %)
0 diff
(100 %id)
AL597414   .a 6575 to 7176 1 to 602       602/602
(100 %)
2 diff
(99.7 %id)
BF031556 hypernephroma, Kidney .a 6582 to 7256 1 to 675       675/777
(86 %)
27 diff
(96.6 %id)
CV572861 cornea, eye .a 6582 to 7150 1 to 569       569/569
(100 %)
0 diff
(100 %id)
AV752270 Pituitary .a 6587 to 7250 1 to 662       662/783
(84 %)
17 diff
(97.9 %id)
BQ025353 placenta .a 6609 to 7244 654 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 636/636
(100 %)
0 diff
(100 %id)
CB131966 Liver .a 6616 to 7118 1 to 503       503/503
(100 %)
0 diff
(100 %id)
TI_154009110   .a 6630 to 7237 725 to 112   AAA Possibly primed on the genome, locally A rich (19/21 A in genome downstream of last aligned base) 614/964
(63 %)
13 diff
(98.7 %id)
CD107092 brain, Pituitary .a 6659 to 7319 1 to 667       667/855
(78 %)
8 diff
(99.1 %id)
AU146082 whole embryo, mainly head .a 6687 to 7244 558 to 1       558/592
(94 %)
14 diff
(97.7 %id)
BE550706 carcinoid, lung .a 6716 to 7247 532 to 1       532/532
(100 %)
0 diff
(100 %id)
AA453271   .a 6738 to 7240 504 to 1       504/504
(100 %)
1 diff
(99.9 %id)
AW181939 pooled .a 6739 to 7244 506 to 1       506/506
(100 %)
1 diff
(99.9 %id)
AI951774 brain, four pooled pituitary adenomas .a 6743 to 7244 502 to 1       502/502
(100 %)
0 diff
(100 %id)
BQ019892 Chondrosarcoma, Left Pubic Bone .a 6746 to 7238 19 to 511     Submitted on the opposite strand 493/511
(96 %)
7 diff
(98.7 %id)
AI347313 2 pooled tumors (clear cell type), Kidney .a 6750 to 7249 500 to 1       500/500
(100 %)
0 diff
(100 %id)
BE925436 amnion_normal .a 6751 to 7126 1 to 376       376/384
(97 %)
5 diff
(98.7 %id)
AI240188 pooled .a 6768 to 7240 473 to 1       473/473
(100 %)
0 diff
(100 %id)
AA838423 germinal center B cell .a 6781 to 7253 473 to 1       473/473
(100 %)
2 diff
(99.6 %id)
BG150896 normal head/neck tissue .a 6787 to 7239 56 to 508       453/508
(89 %)
6 diff
(98.9 %id)
AI749290 colon .a 6794 to 7224 444 to 14   AAA   431/431
(100 %)
7 diff
(98.4 %id)
T87065 liver and spleen .a 6812 to 7238 439 to 1       439/491
(89 %)
16 diff
(96.8 %id)
AI222333 pooled .a 6813 to 7236 426 to 3       424/426
(99 %)
0 diff
(100 %id)
AA017248 eye, retina .a 6821 to 7245 431 to 1       431/435
(99 %)
7 diff
(98.4 %id)
AW183607 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 6825 to 7244 420 to 1       420/420
(100 %)
2 diff
(99.6 %id)
AW664946 pooled .a 6825 to 7311 1 to 487     Submitted on the opposite strand 487/487
(100 %)
7 diff
(98.6 %id)
AW274127 pooled .a 6826 to 7180 1 to 355     Submitted on the opposite strand 355/355
(100 %)
0 diff
(100 %id)
CK299714 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 6828 to 7259 7 to 438     Submitted on the opposite strand 432/446
(96 %)
4 diff
(99.2 %id)
TI_151811797   .a 6828 to 7258 505 to 75     Submitted on the opposite strand 431/968
(44 %)
4 diff
(99.6 %id)
BP239658 Liver .a 6833 to 7431 1 to 600       600/600
(100 %)
14 diff
(97.7 %id)
AA724585 pooled .a 6836 to 7240 405 to 1       405/405
(100 %)
0 diff
(100 %id)
AA016975 eye, retina .a 6840 to 7245 413 to 1       413/413
(100 %)
7 diff
(98.4 %id)
AW192123 adenocarcinoma, Pancreas .a 6842 to 7248 407 to 1       407/407
(100 %)
0 diff
(100 %id)
AA280001 germinal center B cell .a 6849 to 7244 396 to 1       396/396
(100 %)
1 diff
(99.8 %id)
AI816766 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 6851 to 7232 382 to 1       382/382
(100 %)
4 diff
(99.0 %id)
T71191 liver and spleen .a 6853 to 7234 396 to 6   fully sequenced,   391/396
(98 %)
0 diff
(100 %id)
BU189493 melanotic melanoma, skin .a 6853 to 7745 1 to 893       893/895
(99 %)
8 diff
(99.2 %id)
W69210 heart .a 6854 to 7245 396 to 1   fully sequenced,   396/396
(100 %)
2 diff
(99.5 %id)
DN914700   .a 6867 to 7235 369 to 1       369/369
(100 %)
0 diff
(100 %id)
H83868 melanocyte .a 6868 to 7224 360 to 2       359/367
(97 %)
0 diff
(100 %id)
BQ024570 placenta .a 6875 to 7244 388 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 370/370
(100 %)
0 diff
(100 %id)
AI378062 B-cell, chronic lymphotic leukemia .a 6883 to 7245 363 to 1       363/363
(100 %)
0 diff
(100 %id)
AA056997 eye, retina .a 6884 to 7243 371 to 1       371/448
(82 %)
14 diff
(96.9 %id)
FN113619 breast carcinoma .a 6887 to 6982 95 to 1     Submitted on the opposite strand 95/96
(98 %)
1 diff
(99.0 %id)
H47344 liver and spleen .a 6894 to 7223 332 to 1       332/332
(100 %)
4 diff
(98.8 %id)
N37007 melanocyte .a 6905 to 7236 332 to 1       332/334
(99 %)
6 diff
(98.3 %id)
R62622 placenta .a 6916 to 7244 332 to 1       332/335
(99 %)
5 diff
(98.6 %id)
AI142765 pooled .a 6917 to 7243 327 to 1       327/327
(100 %)
0 diff
(100 %id)
AA013049 eye, retina .a 6923 to 7245 329 to 1       329/331
(99 %)
6 diff
(98.2 %id)
H99313 melanocyte .a 6928 to 7244 327 to 1       327/327
(100 %)
13 diff
(96.1 %id)
AA991548 breast .a 6944 to 7243 300 to 1       300/300
(100 %)
1 diff
(99.7 %id)
BQ024295 placenta .a 6957 to 7244 306 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 288/288
(100 %)
1 diff
(99.7 %id)
BQ776003 Bone, Human Chondrosarcoma Cell Line .a 6973 to 7670 712 to 15   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 698/698
(100 %)
1 diff
(99.9 %id)
CV570334 cornea, eye .a 6974 to 7600 1 to 628       628/628
(100 %)
1 diff
(99.9 %id)
FN174374 breast carcinoma .a 7015 to 7118 1 to 107       107/107
(100 %)
3 diff
(97.2 %id)
CN359680 embryonic stem cells, DMSO-treated H9 cellline .a 7100 to 7501 1 to 402   tiling clone,   402/402
(100 %)
0 diff
(100 %id)
AW271163 colon, moderately-differentiated adenocarcinoma .a 7109 to 7244 137 to 1       137/137
(100 %)
3 diff
(97.9 %id)
TI_151787257   .a 7110 to 7959 79 to 914       836/980
(85 %)
108 diff
(89.0 %id)
CX783271 human embryonic stem cells .a 7118 to 7666 577 to 29   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 549/549
(100 %)
6 diff
(99.0 %id)
BQ718609 sympathetic trunk .a 7193 to 7936 12 to 772       761/999
(76 %)
54 diff
(94.6 %id)
BE890098 leiomyosarcoma, uterus .a 7243 to 7901 1 to 673       673/1082
(62 %)
22 diff
(98.0 %id)
DA142338 alzheimer cortex .a 7271 to 7824 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
CB216451 normal endometrium, mid-secretory phase,cycle day 23, uterus .a 7281 to 7886 1 to 606       606/606
(100 %)
0 diff
(100 %id)
AA452692   .a 7296 to 7701 15 to 420       406/420
(96 %)
6 diff
(98.6 %id)
CX787703 human embryonic stem cells .a 7331 to 8192 1 to 863       863/863
(100 %)
2 diff
(99.8 %id)
BM742015 stomach .a 7388 to 8032 1 to 645       645/645
(100 %)
0 diff
(100 %id)
BQ954262 leiomyosarcoma, uterus .a 7404 to 8228 1 to 829   tiling clone,   829/829
(100 %)
8 diff
(99.1 %id)
N52756 multiple sclerosis lesions .a 7421 to 7579 22 to 181       160/181
(88 %)
6 diff
(96.7 %id)
CD299498 Blood vessels - aorta, basilar and artery .a 7463 to 8014 1 to 557       557/759
(73 %)
17 diff
(97.8 %id)
BM460859 leiomyosarcoma, uterus .a 7531 to 8257 149 to 888       740/1092
(67 %)
19 diff
(98.3 %id)
BU508845 leiomyosarcoma, uterus .a 7593 to 8386 1 to 816       816/876
(93 %)
26 diff
(97.1 %id)
CN359679 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 7599 to 7951 1 to 353       353/353
(100 %)
0 diff
(100 %id)
H12790 placenta .a 7624 to 7987 1 to 373       373/431
(86 %)
10 diff
(97.7 %id)
BX500937 Liver .a 7632 to 8219 1 to 589       589/589
(100 %)
2 diff
(99.7 %id)
AA480135 ovarian tumor, ovary .a 7679 to 8124 1 to 446       446/446
(100 %)
3 diff
(99.4 %id)
BF830482 head_neck .a 7742 to 8109 1 to 368       368/368
(100 %)
4 diff
(99.0 %id)
W40185 lung .a 7769 to 8188 1 to 424       424/424
(100 %)
4 diff
(99.1 %id)
AA449051   .a 7791 to 8372 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
W39737 parathyroid gland, parathyroid tumor .a 7868 to 8278 1 to 412     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 412/412
(100 %)
1 diff
(99.8 %id)
AW968443   .a 7917 to 8502 1 to 582       582/582
(100 %)
12 diff
(98.0 %id)
AA216276   .a 7943 to 8077 1 to 138       138/138
(100 %)
6 diff
(95.7 %id)
AA491167 germinal center B cell .a 7951 to 8292 1 to 341     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 341/341
(100 %)
1 diff
(99.8 %id)
AA026995 heart .a 7959 to 8111 1 to 153       153/156
(98 %)
1 diff
(99.4 %id)
AA046281 uterus .a 7959 to 8260 1 to 309       309/312
(99 %)
9 diff
(97.2 %id)
AA459054 germinal center B cell .a 7959 to 8360 1 to 402       402/402
(100 %)
2 diff
(99.6 %id)
BE565296 bladder, carcinoma, cell line .a 8034 to 8660 1 to 619       619/855
(72 %)
23 diff
(97.4 %id)
BX415209 thymus .a 8098 to 9127 1025 to 1       1025/1039
(98 %)
8 diff
(99.3 %id)
T57741 lung .a 8100 to 8424 1 to 329       329/331
(99 %)
11 diff
(96.7 %id)
BQ224914 epithelioid carcinoma, Pancreas .a 8143 to 8902 1 to 769       769/908
(84 %)
19 diff
(98.0 %id)
FN109372 breast carcinoma .a 8158 to 8244 86 to 1     Submitted on the opposite strand 86/87
(98 %)
1 diff
(98.9 %id)
BX646077   .a 8159 to 8758 1 to 598       598/598
(100 %)
2 diff
(99.7 %id)
BQ100965 Islets of Langerhans, Pancreas .a 8175 to 8678 1 to 504       504/504
(100 %)
0 diff
(100 %id)
CK823035 Islets of Langerhans, Pancreas .a 8175 to 8757 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BG576671 breast, mammary adenocarcinoma, cell line .a 8183 to 8908 1 to 725       725/735
(98 %)
5 diff
(99.4 %id)
FN116070 breast carcinoma .a 8197 to 8291 1 to 96       96/97
(98 %)
3 diff
(97.0 %id)
BU689746 Human Lung Epithelial cells, lung .a 8198 to 8941 756 to 14   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 743/743
(100 %)
1 diff
(99.9 %id)
CB123713 Liver .a 8224 to 8511 1 to 288       288/288
(100 %)
1 diff
(99.7 %id)
TI_149303969   .a 8238 to 8941 763 to 62   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 702/703
(99 %)
10 diff
(98.6 %id)
BM981875 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 8259 to 8941 695 to 14   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 682/682
(100 %)
9 diff
(98.7 %id)
AW369578 breast_normal .a 8279 to 8752 23 to 498       476/498
(95 %)
6 diff
(98.8 %id)
CA422776 cell lines, Chondrosarcoma .a 8279 to 8946 681 to 14       668/681
(98 %)
0 diff
(100 %id)
BM469540 embryonal carcinoma, cell line, testis .a 8285 to 8950 1 to 666   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 666/667
(99 %)
6 diff
(99.2 %id)
AW023911 cochlea, ear .a 8296 to 8797 8 to 508       501/508
(98 %)
6 diff
(98.9 %id)
AW975189   .a 8301 to 8881 581 to 1     Submitted on the opposite strand 581/582
(99 %)
0 diff
(100 %id)
BF681571 Prostate .a 8351 to 8897 1 to 538       538/538
(100 %)
11 diff
(98.0 %id)
AW992003 breast_normal .a 8352 to 8892 1 to 548       548/549
(99 %)
20 diff
(96.4 %id)
CK823034 Islets of Langerhans, Pancreas .a 8362 to 8944 583 to 1       583/583
(100 %)
0 diff
(100 %id)
AA434101 ovarian tumor, ovary .a 8377 to 8810 1 to 434     Submitted on the opposite strand 434/434
(100 %)
0 diff
(100 %id)
BQ773310 Chondrosarcoma Cell line .a 8387 to 8941 568 to 14   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 555/555
(100 %)
0 diff
(100 %id)
BE564214 bladder, carcinoma, cell line .a 8388 to 8730 284 to 620       337/762
(44 %)
13 diff
(98.3 %id)
TI_157596855   .a 8393 to 8936 651 to 101   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 551/604
(91 %)
22 diff
(96.4 %id)
AW295549   .a 8394 to 8941 560 to 13   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 548/548
(100 %)
1 diff
(99.9 %id)
BQ100689 Islets of Langerhans, Pancreas .a 8394 to 8944 551 to 1       551/551
(100 %)
0 diff
(100 %id)
AI452548 pooled .a 8398 to 8941 556 to 13   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 544/544
(100 %)
1 diff
(99.9 %id)
BX101180 ovarian tumor, ovary .a 8402 to 9140 753 to 15   tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 739/739
(100 %)
0 diff
(100 %id)
BM742611 Ascites, stomach .a 8409 to 8915 1 to 507       507/507
(100 %)
0 diff
(100 %id)
AI538193 Kidney .a 8413 to 8941 529 to 1       529/529
(100 %)
1 diff
(99.9 %id)
AI808715 pooled .a 8421 to 8940 523 to 4       520/523
(99 %)
0 diff
(100 %id)
AI935493 Kidney .a 8422 to 8945 524 to 1       524/524
(100 %)
0 diff
(100 %id)
AA807860 normal prostate, Prostate .a 8438 to 8883 448 to 3       446/448
(99 %)
0 diff
(100 %id)
AA046248 uterus .a 8452 to 8873 430 to 1       430/440
(97 %)
12 diff
(97.3 %id)
FN061298 breast carcinoma .a 8478 to 8583 104 to 1     Submitted on the opposite strand 104/107
(97 %)
2 diff
(98.2 %id)
N98342 lung .a 8487 to 8947 454 to 1       454/463
(98 %)
8 diff
(98.3 %id)
AW611792 Kidney .a 8491 to 8941 451 to 1       451/451
(100 %)
1 diff
(99.8 %id)
FN159711 breast carcinoma .a 8495 to 8607 114 to 1     Submitted on the opposite strand 114/114
(100 %)
3 diff
(97.4 %id)
N21989 cochlea, ear .a 8497 to 8941 447 to 1       447/448
(99 %)
2 diff
(99.6 %id)
AI421337 brain, glioblastoma (pooled) .a 8498 to 8941 444 to 1       444/444
(100 %)
0 diff
(100 %id)
AA449765   .a 8514 to 8879 369 to 4       366/369
(99 %)
0 diff
(100 %id)
AW571857 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 8517 to 8946 431 to 2       430/431
(99 %)
0 diff
(100 %id)
W15309 parathyroid gland, parathyroid tumor .a 8526 to 8941 429 to 12   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 418/426
(98 %)
2 diff
(99.6 %id)
H12750 placenta .a 8530 to 8931 411 to 1       411/416
(98 %)
13 diff
(96.9 %id)
N49981 multiple sclerosis lesions .a 8533 to 8938 412 to 1       412/460
(89 %)
6 diff
(98.7 %id)
AW992014 breast_normal .a 8536 to 9193 661 to 2     Submitted on the opposite strand 660/661
(99 %)
0 diff
(100 %id)
AI273375 adenocarcinoma, colon .a 8537 to 8941 405 to 1       405/405
(100 %)
0 diff
(100 %id)
AA458864.
matches multiple genes
germinal center B cell .a 8548 to 8941 404 to 11   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base), also hits gene CCDC132 394/394
(100 %)
0 diff
(100 %id)
R26292 placenta .a 8558 to 8946 405 to 3       403/414
(97 %)
0 diff
(100 %id)
AA490973 germinal center B cell .a 8562 to 8936 385 to 11   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 375/375
(100 %)
0 diff
(100 %id)
AI094768 brain, glioblastoma (pooled) .a 8567 to 8941 387 to 13   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 375/375
(100 %)
2 diff
(99.5 %id)
DB301289 alzheimer cortex .a 8577 to 9088 515 to 1       515/515
(100 %)
3 diff
(99.5 %id)
AA947136 Kidney .a 8579 to 8941 387 to 25   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 363/363
(100 %)
0 diff
(100 %id)
AA911685 pooled .a 8592 to 8947 356 to 1       356/356
(100 %)
3 diff
(99.2 %id)
AW992015 breast_normal .a 8602 to 9124 529 to 3     Submitted on the opposite strand 527/530
(99 %)
0 diff
(100 %id)
AA918132 adenocarcinoma, colon .a 8611 to 8921 311 to 1       311/311
(100 %)
1 diff
(99.7 %id)
AA505830 breast .a 8625 to 8889 1 to 265     Submitted on the opposite strand 265/265
(100 %)
0 diff
(100 %id)
AI921026 adenocarcinoma, Pancreas .a 8648 to 9144 497 to 1       497/497
(100 %)
0 diff
(100 %id)
AI921036 adenocarcinoma, Pancreas .a 8649 to 9144 496 to 1       496/496
(100 %)
0 diff
(100 %id)
BG165543 hypernephroma, cell line, Kidney .a 8650 to 9139 1 to 484       484/616
(78 %)
13 diff
(97.9 %id)
BG165079 hypernephroma, cell line, Kidney .a 8650 to 9139 1 to 495       495/804
(61 %)
11 diff
(98.7 %id)
AW873721 adrenal gland, neuroblastoma .a 8651 to 8941 306 to 16   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 291/291
(100 %)
0 diff
(100 %id)
R26681 placenta .a 8664 to 8937 278 to 1       278/278
(100 %)
7 diff
(97.5 %id)
AW971487   .a 8667 to 8934 272 to 1     Submitted on the opposite strand 272/295
(92 %)
19 diff
(93.6 %id)
FN122619 breast carcinoma .a 8684 to 8796 113 to 3     Submitted on the opposite strand 111/124
(89 %)
0 diff
(100 %id)
AA912140 pooled .a 8687 to 8946 262 to 3       260/262
(99 %)
0 diff
(100 %id)
FN146715 breast carcinoma .a 8688 to 8815 130 to 1     Submitted on the opposite strand 130/130
(100 %)
3 diff
(97.7 %id)
AA434034 ovarian tumor, ovary .a 8734 to 9140 407 to 1     Submitted on the opposite strand 407/407
(100 %)
1 diff
(99.8 %id)
AI825115 pooled germ cell tumors .a 8819 to 9141 325 to 3       323/325
(99 %)
0 diff
(100 %id)
FN081745 breast carcinoma .a 8960 to 9013 1 to 55       55/55
(100 %)
1 diff
(98.2 %id)
BX644178   .a 9077 to 9613 1 to 537   tiling clone,   537/537
(100 %)
0 diff
(100 %id)
BE145360 head_neck .b 1 to 544 12 to 557   tiling clone,   546/557
(98 %)
6 diff
(99.0 %id)
BE145514 head_neck .b 172 to 544 373 to 1   tiling clone, Submitted on the opposite strand 373/373
(100 %)
1 diff
(99.8 %id)
BE145390 head_neck .b 200 to 556 1 to 357   tiling clone,   357/360
(99 %)
5 diff
(98.7 %id)
BE145389 head_neck .b 212 to 544 333 to 1     Submitted on the opposite strand 333/333
(100 %)
2 diff
(99.4 %id)
BE145480 head_neck .b 220 to 544 325 to 1     Submitted on the opposite strand 325/325
(100 %)
1 diff
(99.7 %id)
AA302425 adipose tissue, white .b 223 to 573 351 to 1       351/351
(100 %)
2 diff
(99.5 %id)
BE145479 head_neck .b 291 to 544 1 to 254       254/254
(100 %)
0 diff
(100 %id)
BE145491 head_neck .b 291 to 544 1 to 254       254/254
(100 %)
1 diff
(99.7 %id)
BE145376 head_neck .b 328 to 544 217 to 1     Submitted on the opposite strand 217/217
(100 %)
1 diff
(99.6 %id)
AW368869 head_neck .b 380 to 544 165 to 1       165/165
(100 %)
1 diff
(99.4 %id)
BI561402 testis .b 492 to 1192 1 to 708       708/816
(86 %)
15 diff
(98.2 %id)
TI_44350010   .b 492 to 1291 124 to 939       816/939
(86 %)
25 diff
(97.4 %id)
BC042999 testis .b 497 to 3795 1 to 3299 A536V tiling clone, available from MGC, AAA   3299/3299
(100 %)
5 diff
(99.9 %id)
DB064871 testis .b 529 to 1060 2 to 533   tiling clone, capped   532/532
(100 %)
0 diff
(100 %id)
DB071149 testis .b 529 to 1068 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
TI_1948207647   .b 2521 to 3691 1288 to 129   tiling clone,   1160/1294
(89 %)
42 diff
(96.8 %id)
DA580168   .c 1 to 571 2 to 575   tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
DB318994   .c 1745 to 2269 525 to 1   tiling clone,   525/525
(100 %)
0 diff
(100 %id)
BF837147 head_neck .c 1857 to 2217 6 to 366       361/366
(98 %)
6 diff
(98.4 %id)
DB070584 testis .d 1 to 543 2 to 544   tiling clone, capped   543/543
(100 %)
0 diff
(100 %id)
DB080247 testis .d 9 to 589 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DB064056 testis .d 11 to 544 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DB065595 testis .d 11 to 591 2 to 583   capped   582/582
(100 %)
3 diff
(99.5 %id)
DB068810 testis .d 11 to 550 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DB075015 testis .d 14 to 562 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB064256 testis .d 15 to 558 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
DB063255 testis .d 18 to 563 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DB086718 testis .d 23 to 597 2 to 576 exact tiling clone, capped   575/575
(100 %)
0 diff
(100 %id)
AW628946 pooled .e 1 to 493 502 to 7 S62R G63S T64G S65T P66S ... tiling clone,   495/502
(98 %)
0 diff
(100 %id)
AI336859 pooled germ cell tumors .e 3 to 490 491 to 1       490/491
(99 %)
1 diff
(99.8 %id)
AI797346 pooled .e 27 to 490 467 to 1       466/467
(99 %)
1 diff
(99.8 %id)
AI653007 pooled germ cell tumors .e 42 to 491 453 to 1       452/453
(99 %)
5 diff
(98.9 %id)
AI828845 pooled germ cell tumors .e 53 to 490 440 to 1       439/440
(99 %)
2 diff
(99.6 %id)
AW628938 pooled .e 94 to 493 409 to 7       402/409
(98 %)
1 diff
(99.8 %id)
AI655242 pooled germ cell tumors .e 122 to 490 373 to 1       372/373
(99 %)
2 diff
(99.5 %id)
BF885429 testis_normal .f 1 to 271 39 to 309 exact tiling clone,   271/320
(84 %)
7 diff
(97.9 %id)
DB068175 testis .g 1 to 532 2 to 536 S47R G48S T49G S50T P51S ... tiling clone, capped   535/535
(100 %)
3 diff
(99.5 %id)
BE147686 head_neck .h-u 1 to 450 465 to 18 N14H K19Q I23L K24T L25I ... tiling clone, Submitted on the opposite strand 448/649
(69 %)
0 diff
(100 %id)
AW890599 nervous_tumor .h-u 213 to 542 329 to 1 exact tiling clone,   329/329
(100 %)
8 diff
(97.6 %id)
AA092206   Gene ASXL2, variant not shown         Suspected internal deletion, this clone was ignored    
AV709535 adrenal gland Gene ASXL2, variant not shown         Suspected internal deletion, this clone was ignored    
N75937 liver and spleen Gene ASXL2, variant not shown         This clone was ignored    
W05122 liver and spleen Gene ASXL2, variant not shown         This clone was ignored    
DB070120 testis Gene ASXL2, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB340087 testis Gene ASXL2, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI