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Gene ASCL1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
212 supporting clones for gene ASCL1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA005289   .a 1 to 504 2 to 506   tiling clone, capped   505/505
(100 %)
2 diff
(99.7 %id)
AK290539 brain .a 30 to 1680 1 to 1651 exact     1651/1651
(100 %)
2 diff
(99.9 %id)
NM_004316.3   .a 30 to 2519 1 to 2490 exact RefSeq,   2490/2490
(100 %)
5 diff
(99.8 %id)
DA006637   .a 31 to 557 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
DA485882 brain .a 31 to 530 2 to 502   capped   501/501
(100 %)
1 diff
(99.9 %id)
DA506607 brain .a 31 to 577 2 to 549   capped   548/548
(100 %)
3 diff
(99.5 %id)
DA523117 brain .a 31 to 591 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DA524223 brain .a 31 to 595 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
DB475213 hippocampus .a 33 to 508 1 to 476       476/476
(100 %)
1 diff
(99.8 %id)
DA788808 brain .a 34 to 574 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DN992610 brain, whole brain .a 38 to 795 1 to 759       759/759
(100 %)
6 diff
(99.3 %id)
BC004425 Lung, small cell carcinoma .a 42 to 2506 1 to 2463   available from MGC, AAA Possibly primed on the genome, locally A rich (16/20 A in genome downstream of last aligned base) 2463/2463
(100 %)
4 diff
(99.9 %id)
AW248217 lung, small cell carcinoma .a 42 to 439 10 to 407   available from MGC,   398/407
(97 %)
6 diff
(98.6 %id)
BC001638 Lung, small cell carcinoma .a 42 to 2506 1 to 2463 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (16/20 A in genome downstream of last aligned base) 2463/2463
(100 %)
4 diff
(99.9 %id)
AW246125 lung, small cell carcinoma .a 47 to 298 8 to 260       253/260
(97 %)
6 diff
(97.7 %id)
AW246056 lung, small cell carcinoma .a 47 to 435 8 to 397       390/397
(98 %)
6 diff
(98.5 %id)
BQ889747 brain, neuroblastoma, cell line .a 47 to 455 1 to 414       414/1116
(37 %)
14 diff
(98.8 %id)
BC002341 Lung, small cell carcinoma .a 49 to 1422 1 to 1375 exact available from MGC, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 1375/1375
(100 %)
1 diff
(100.0 %id)
BC003134 Lung, small cell carcinoma .a 49 to 1422 1 to 1375 exact available from MGC, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 1375/1375
(100 %)
1 diff
(100.0 %id)
BE207221 lung, small cell carcinoma .a 49 to 671 1 to 620       620/622
(99 %)
22 diff
(96.5 %id)
BI116695 lung, small cell carcinoma .a 50 to 405 1 to 358       358/639
(56 %)
12 diff
(98.2 %id)
BQ069920 brain, neuroblastoma, cell line .a 50 to 732 27 to 711       685/1114
(61 %)
21 diff
(98.2 %id)
BE793101 lung, small cell carcinoma .a 52 to 774 1 to 724       724/726
(99 %)
19 diff
(97.4 %id)
BI116420 lung, small cell carcinoma .a 53 to 730 1 to 689       689/823
(83 %)
56 diff
(93.2 %id)
BE796424 lung, small cell carcinoma .a 56 to 799 1 to 742       742/1068
(69 %)
25 diff
(97.7 %id)
BI195965 brain, neuroblastoma .a 57 to 920 1 to 869       869/959
(90 %)
46 diff
(95.3 %id)
BY799988 eye .a 60 to 662 1 to 604       604/604
(100 %)
1 diff
(99.9 %id)
AW249314 lung, small cell carcinoma .a 60 to 553 10 to 503     Possibly primed on the genome, locally A rich (16/20 A in genome downstream of last aligned base) 494/503
(98 %)
6 diff
(98.9 %id)
BE798828 lung, small cell carcinoma .a 60 to 879 13 to 825       813/825
(98 %)
6 diff
(99.3 %id)
BE795011 lung, small cell carcinoma .a 60 to 675 1 to 612       612/612
(100 %)
7 diff
(98.9 %id)
BC031299 Lung, small cell carcinoma .a 64 to 1422 1 to 1359 exact available from MGC, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 1359/1359
(100 %)
0 diff
(100 %id)
BE797438 lung, small cell carcinoma .a 65 to 721 1 to 658       658/1185
(55 %)
11 diff
(99.1 %id)
BF219745 lung, small cell carcinoma .a 67 to 598 1 to 533       533/533
(100 %)
4 diff
(99.3 %id)
BE795605 lung, small cell carcinoma .a 72 to 933 1 to 868       868/1055
(82 %)
54 diff
(94.9 %id)
BE263685 lung, small cell carcinoma .a 73 to 715 1 to 643       643/694
(92 %)
30 diff
(95.7 %id)
BE792137 lung, small cell carcinoma .a 73 to 629 1 to 572       572/803
(71 %)
29 diff
(96.4 %id)
BE796198 lung, small cell carcinoma .a 73 to 838 1 to 766       766/1061
(72 %)
17 diff
(98.4 %id)
BE790962 lung, small cell carcinoma .a 74 to 910 1 to 837       837/1133
(73 %)
51 diff
(95.5 %id)
BE797556 lung, small cell carcinoma .a 78 to 777 1 to 697       697/698
(99 %)
16 diff
(97.8 %id)
AA339332 brain .a 83 to 304 1 to 221       221/221
(100 %)
4 diff
(98.2 %id)
AI791235 carcinoid, lung .a 100 to 693 1 to 593       593/600
(98 %)
2 diff
(99.7 %id)
BQ889690 brain, neuroblastoma, cell line .a 107 to 729 1 to 631       631/1108
(56 %)
14 diff
(98.8 %id)
AW138813   .a 116 to 721 607 to 1       607/607
(100 %)
1 diff
(99.9 %id)
BM718714 eye, fetal eye .a 133 to 828 1 to 695   fully sequenced, Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 695/695
(100 %)
2 diff
(99.8 %id)
AI732917 carcinoid, lung .a 151 to 722 572 to 1       572/572
(100 %)
4 diff
(99.4 %id)
AI348352 carcinoid, lung .a 163 to 699 537 to 1       537/537
(100 %)
1 diff
(99.9 %id)
AI309620 2 pooled tumors (clear cell type), Kidney .a 164 to 692 536 to 8       529/536
(98 %)
0 diff
(100 %id)
AI309626 2 pooled tumors (clear cell type), Kidney .a 164 to 699 536 to 1       536/536
(100 %)
4 diff
(99.3 %id)
L08424   .a 169 to 1798 1 to 1635 A63Q P64Q Q65A L66P R67Q ...     1635/1635
(100 %)
7 diff
(99.6 %id)
AW131522 brain, medulloblastoma .a 193 to 722 530 to 1       530/530
(100 %)
0 diff
(100 %id)
AI279866 placenta .a 198 to 722 525 to 1       525/525
(100 %)
0 diff
(100 %id)
AW005310 anaplastic oligodendroglioma, brain .a 199 to 722 523 to 1       523/523
(100 %)
1 diff
(99.9 %id)
AW131575 brain, medulloblastoma .a 199 to 722 524 to 1       524/524
(100 %)
0 diff
(100 %id)
AW131798 brain, medulloblastoma .a 199 to 699 501 to 1       501/501
(100 %)
0 diff
(100 %id)
AW166088 brain, medulloblastoma .a 199 to 699 501 to 1       501/501
(100 %)
0 diff
(100 %id)
AW136752   .a 199 to 721 523 to 1       523/523
(100 %)
3 diff
(99.5 %id)
AI869311 anaplastic oligodendroglioma, brain .a 200 to 699 500 to 1       500/500
(100 %)
0 diff
(100 %id)
AA988946 carcinoid, lung .a 225 to 720 492 to 3       490/492
(99 %)
0 diff
(100 %id)
AI472038 pooled .a 225 to 699 475 to 1       475/475
(100 %)
7 diff
(98.6 %id)
AW149352 brain, medulloblastoma .a 230 to 722 493 to 1       493/493
(100 %)
0 diff
(100 %id)
AI887838 carcinoid, lung .a 237 to 699 462 to 1       462/462
(100 %)
8 diff
(98.3 %id)
AI369271 anaplastic oligodendroglioma, brain .a 239 to 722 484 to 1       484/484
(100 %)
0 diff
(100 %id)
AW138874   .a 245 to 721 478 to 1       478/478
(100 %)
6 diff
(98.8 %id)
AI582784 anaplastic oligodendroglioma, brain .a 246 to 722 477 to 1       477/477
(100 %)
9 diff
(98.2 %id)
AI302735 carcinoid, lung .a 247 to 720 475 to 1       475/476
(99 %)
3 diff
(99.4 %id)
AI298458 carcinoid, lung .a 249 to 704 456 to 1       456/456
(100 %)
2 diff
(99.6 %id)
AI799597 pooled .a 251 to 722 470 to 1       470/470
(100 %)
2 diff
(99.6 %id)
AI937625 anaplastic oligodendroglioma, brain .a 256 to 680 425 to 1       425/426
(99 %)
5 diff
(98.9 %id)
BM696219 eye, human retina .a 256 to 368 1 to 113       113/113
(100 %)
0 diff
(100 %id)
BM715329 eye, human retina .a 256 to 714 1 to 459       459/459
(100 %)
0 diff
(100 %id)
TI_151700820   .a 256 to 723 518 to 51       468/1074
(43 %)
0 diff
(100 %id)
AA825225 carcinoid, lung .a 263 to 643 374 to 5       370/386
(95 %)
0 diff
(100 %id)
AA935860 carcinoid, lung .a 263 to 713 448 to 2       447/448
(99 %)
0 diff
(100 %id)
AA973587 carcinoid, lung .a 266 to 652 377 to 1       377/382
(98 %)
11 diff
(97.2 %id)
BE383576 brain, neuroblastoma .a 268 to 1012 1 to 762       762/865
(88 %)
61 diff
(93.0 %id)
AW139639   .a 276 to 721 446 to 1       446/446
(100 %)
0 diff
(100 %id)
AW248350 lung, small cell carcinoma .a 284 to 748 10 to 474       465/474
(98 %)
6 diff
(98.8 %id)
AI300010 carcinoid, lung .a 304 to 699 396 to 1       396/396
(100 %)
0 diff
(100 %id)
AW149697 brain, medulloblastoma .a 304 to 722 419 to 1       419/419
(100 %)
1 diff
(99.8 %id)
AW149424 brain, medulloblastoma .a 312 to 699 389 to 1       389/389
(100 %)
6 diff
(98.5 %id)
AI885738 anaplastic oligodendroglioma, brain .a 324 to 693 370 to 1       370/370
(100 %)
0 diff
(100 %id)
AI934490 anaplastic oligodendroglioma, brain .a 343 to 722 380 to 1       380/380
(100 %)
0 diff
(100 %id)
AI933274 anaplastic oligodendroglioma, brain .a 349 to 722 374 to 1       374/374
(100 %)
3 diff
(99.2 %id)
AA878788 carcinoid, lung .a 362 to 684 320 to 1       320/320
(100 %)
10 diff
(96.9 %id)
AI184122 lung .a 372 to 722 350 to 1       350/350
(100 %)
1 diff
(99.8 %id)
AI474972 anaplastic oligodendroglioma, brain .a 372 to 722 350 to 1       350/350
(100 %)
3 diff
(99.2 %id)
AW014831   .a 375 to 721 347 to 1       347/352
(98 %)
4 diff
(98.9 %id)
AW138936   .a 383 to 721 340 to 1       340/346
(98 %)
6 diff
(98.3 %id)
DA159631 amygdala .a 397 to 843 2 to 447   capped   446/446
(100 %)
1 diff
(99.8 %id)
AU117075 whole embryo, mainly head .a 397 to 997 2 to 604   fully sequenced, capped   603/603
(100 %)
4 diff
(99.4 %id)
AW149783 brain, medulloblastoma .a 404 to 699 297 to 1       297/297
(100 %)
1 diff
(99.7 %id)
BE671557 carcinoid, lung .a 405 to 723 319 to 1       319/319
(100 %)
1 diff
(99.7 %id)
AK314114 amygdala .a 417 to 1311 1 to 898 A63Q P64A Q65P L66Q R67L ...     898/898
(100 %)
1 diff
(99.9 %id)
DA150119 amygdala .a 418 to 683 2 to 267   capped   266/266
(100 %)
0 diff
(100 %id)
AW005359 anaplastic oligodendroglioma, brain .a 420 to 699 280 to 1       280/280
(100 %)
0 diff
(100 %id)
AA931553 carcinoid, lung .a 421 to 656 230 to 1       230/230
(100 %)
9 diff
(96.1 %id)
BG149948 carcinoid, lung .a 422 to 723 302 to 1       302/302
(100 %)
1 diff
(99.7 %id)
BF433583 carcinoid, lung .a 422 to 672 251 to 1       251/251
(100 %)
0 diff
(100 %id)
AA973990 carcinoid, lung .a 425 to 680 251 to 1       251/251
(100 %)
6 diff
(97.7 %id)
AI826121 anaplastic oligodendroglioma, brain .a 426 to 723 300 to 4       297/300
(99 %)
0 diff
(100 %id)
BE221091 carcinoid, lung .a 431 to 704 274 to 1       274/274
(100 %)
0 diff
(100 %id)
BE644690 carcinoid, lung .a 434 to 723 290 to 1       290/290
(100 %)
4 diff
(98.7 %id)
BF438164 carcinoid, lung .a 434 to 670 238 to 2       237/238
(99 %)
0 diff
(100 %id)
AI474957 anaplastic oligodendroglioma, brain .a 438 to 722 285 to 1       285/285
(100 %)
2 diff
(99.3 %id)
BG149312 carcinoid, lung .a 468 to 723 256 to 1       256/256
(100 %)
1 diff
(99.7 %id)
BE799569 lung, small cell carcinoma .a 535 to 1271 33 to 758       726/1019
(71 %)
13 diff
(98.8 %id)
BQ069472 brain, neuroblastoma, cell line .a 536 to 1123 1 to 594       594/1321
(44 %)
24 diff
(98.2 %id)
BF205953 brain, neuroblastoma .a 537 to 1187 1 to 654       654/656
(99 %)
6 diff
(99.1 %id)
AA915946 carcinoid, lung .a 601 to 691 91 to 1       91/91
(100 %)
2 diff
(97.9 %id)
BF195363 carcinoid, lung .a 601 to 721 121 to 1       121/121
(100 %)
9 diff
(92.6 %id)
BX332370 Neuroblastoma Cot 25-normalized .a 710 to 1543 1 to 831       831/831
(100 %)
10 diff
(98.8 %id)
BF195482 carcinoid, lung .a 714 to 1188 1 to 475     Submitted on the opposite strand 475/475
(100 %)
24 diff
(95.0 %id)
BE464513 carcinoid, lung .a 716 to 1195 1 to 481     Submitted on the opposite strand 481/485
(99 %)
25 diff
(94.9 %id)
CB054923 brain, glioblastoma (pooled) .a 723 to 1446 1 to 725     Submitted on the opposite strand 725/738
(98 %)
3 diff
(99.6 %id)
AA987205 carcinoid, lung .a 729 to 1087 9 to 363     Submitted on the opposite strand 355/363
(97 %)
23 diff
(93.7 %id)
BM677526 eye, fetal eye .a 729 to 1422 706 to 13   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 694/694
(100 %)
0 diff
(100 %id)
AA908692 carcinoid, lung .a 730 to 1031 12 to 307     Submitted on the opposite strand 296/307
(96 %)
6 diff
(98.1 %id)
AA937787 carcinoid, lung .a 737 to 1086 1 to 342     Submitted on the opposite strand 342/342
(100 %)
16 diff
(95.4 %id)
AA902360 carcinoid, lung .a 738 to 1141 20 to 420     Submitted on the opposite strand 401/420
(95 %)
6 diff
(98.6 %id)
AA989270 carcinoid, lung .a 738 to 961 22 to 244     Submitted on the opposite strand 223/244
(91 %)
6 diff
(97.6 %id)
AA886463 carcinoid, lung .a 739 to 959 1 to 222     Submitted on the opposite strand 222/226
(98 %)
6 diff
(97.4 %id)
AA910399 carcinoid, lung .a 739 to 1087 1 to 345     Submitted on the opposite strand 345/345
(100 %)
13 diff
(96.3 %id)
AI733242 carcinoid, lung .a 744 to 1308 1 to 565     Submitted on the opposite strand 565/565
(100 %)
4 diff
(99.3 %id)
AA775745 whole brain .a 748 to 1221 1 to 467     Submitted on the opposite strand 467/467
(100 %)
23 diff
(95.1 %id)
AA847604.
matches multiple genes
carcinoid, lung .a 748 to 1222 1 to 468     also hits gene PAH 468/469
(99 %)
15 diff
(96.9 %id)
AA935308 carcinoid, lung .a 748 to 1015 1 to 261     Submitted on the opposite strand 261/261
(100 %)
13 diff
(95.1 %id)
AA988972 carcinoid, lung .a 748 to 1087 1 to 334     Submitted on the opposite strand 334/334
(100 %)
19 diff
(94.4 %id)
AA985540 carcinoid, lung .a 752 to 1184 8 to 424     Submitted on the opposite strand 417/447
(93 %)
8 diff
(98.3 %id)
AA887504 carcinoid, lung .a 755 to 1049 16 to 307     Submitted on the opposite strand 292/311
(93 %)
14 diff
(95.5 %id)
AA934411 carcinoid, lung .a 755 to 1087 1 to 325     Submitted on the opposite strand 325/325
(100 %)
19 diff
(94.2 %id)
AA976728 carcinoid, lung .a 755 to 1213 1 to 449     Submitted on the opposite strand 449/449
(100 %)
21 diff
(95.4 %id)
AA987908 carcinoid, lung .a 755 to 1087 1 to 325     Submitted on the opposite strand 325/325
(100 %)
16 diff
(95.1 %id)
DA178643 amygdala .a 756 to 1304 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
AA908852 carcinoid, lung .a 759 to 1212 1 to 441     Submitted on the opposite strand 441/441
(100 %)
23 diff
(94.8 %id)
BE669835 carcinoid, lung .a 759 to 1308 1 to 550     Submitted on the opposite strand 550/550
(100 %)
37 diff
(93.3 %id)
AA907203 carcinoid, lung .a 760 to 1016 1 to 257     Submitted on the opposite strand 257/260
(98 %)
9 diff
(96.6 %id)
AA977660 carcinoid, lung .a 765 to 1141 1 to 375     Submitted on the opposite strand 375/375
(100 %)
17 diff
(95.5 %id)
AI912110 carcinoid, lung .a 798 to 1302 1 to 505     Submitted on the opposite strand 505/505
(100 %)
23 diff
(95.5 %id)
AW772724 normal epithelium, thyroid .a 798 to 1092 1 to 295     Submitted on the opposite strand 295/295
(100 %)
22 diff
(92.6 %id)
BE674488 carcinoid, lung .a 798 to 1298 1 to 501     Submitted on the opposite strand 501/502
(99 %)
23 diff
(95.5 %id)
BG150343 carcinoid, lung .a 798 to 1110 1 to 313     Submitted on the opposite strand 313/313
(100 %)
20 diff
(93.7 %id)
BF110155 carcinoid, lung .a 798 to 980 1 to 184     Submitted on the opposite strand 184/184
(100 %)
9 diff
(95.2 %id)
BF108621 carcinoid, lung .a 798 to 1044 1 to 247     Submitted on the opposite strand 247/247
(100 %)
13 diff
(94.8 %id)
BU742375 eye, fetal eye .a 798 to 1422 637 to 13   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 625/625
(100 %)
0 diff
(100 %id)
AI793265 carcinoid, lung .a 799 to 1450 651 to 1     Submitted on the opposite strand 651/651
(100 %)
6 diff
(99.1 %id)
BF108559 carcinoid, lung .a 801 to 1167 1 to 367     Submitted on the opposite strand 367/367
(100 %)
20 diff
(94.6 %id)
BF220295 lung, small cell carcinoma .a 809 to 1368 569 to 10       560/569
(98 %)
0 diff
(100 %id)
AI292031 carcinoid, lung .a 810 to 1213 1 to 404     Submitted on the opposite strand 404/406
(99 %)
18 diff
(95.6 %id)
AA069862 pineal gland .a 822 to 978 1 to 157     Submitted on the opposite strand 157/157
(100 %)
10 diff
(93.7 %id)
AA902251 carcinoid, lung .a 823 to 961 1 to 140     Submitted on the opposite strand 140/142
(98 %)
9 diff
(93.7 %id)
AA907272 carcinoid, lung .a 825 to 955 1 to 131     Submitted on the opposite strand 131/133
(98 %)
8 diff
(94.0 %id)
AA887011 carcinoid, lung .a 830 to 966 1 to 136     Submitted on the opposite strand 136/136
(100 %)
9 diff
(93.4 %id)
BF111181 carcinoid, lung .a 831 to 1308 1 to 478     Submitted on the opposite strand 478/478
(100 %)
30 diff
(93.8 %id)
AI279194 carcinoid, lung .a 835 to 1430 596 to 1       596/596
(100 %)
6 diff
(99.0 %id)
AA902356 carcinoid, lung .a 836 to 1118 1 to 275     Submitted on the opposite strand 275/275
(100 %)
13 diff
(95.3 %id)
AW249707 lung, small cell carcinoma .a 855 to 1450 605 to 11   AAA Possibly primed on the genome, locally A rich (16/20 A in genome downstream of last aligned base) 595/595
(100 %)
2 diff
(99.7 %id)
AI371500 brain, glioblastoma (pooled) .a 857 to 1060 168 to 371     Submitted on the opposite strand 204/376
(54 %)
6 diff
(98.5 %id)
AA988489 carcinoid, lung .a 870 to 960 1 to 91     Submitted on the opposite strand 91/91
(100 %)
4 diff
(95.7 %id)
DB472729 hippocampus .a 882 to 1373 1 to 492       492/492
(100 %)
3 diff
(99.4 %id)
BG149782 carcinoid, lung .a 888 to 1305 1 to 418     Submitted on the opposite strand 418/418
(100 %)
25 diff
(94.1 %id)
DB180677 kidney, tumor tissue .a 895 to 1138 2 to 256   capped   255/255
(100 %)
18 diff
(93.0 %id)
AW249591 lung, small cell carcinoma .a 901 to 1432 532 to 1       532/532
(100 %)
2 diff
(99.7 %id)
BM021413 Islets of Langerhans, Pancreas .a 909 to 1417 1 to 509       509/509
(100 %)
0 diff
(100 %id)
BE223110 brain, oligodendroglioma .a 913 to 1450 538 to 1       538/547
(98 %)
8 diff
(98.6 %id)
BM011676 brain, neuroblastoma, cell line .a 916 to 1434 1 to 521       521/532
(97 %)
9 diff
(98.4 %id)
TI_59380849   .a 917 to 1434 109 to 628       520/1012
(51 %)
8 diff
(99.3 %id)
CB054924 brain, glioblastoma (pooled) .a 931 to 1449 527 to 10     Submitted on the opposite strand 518/527
(98 %)
0 diff
(100 %id)
AW246655 lung, small cell carcinoma .a 962 to 1437 476 to 1       476/476
(100 %)
0 diff
(100 %id)
AU143999 whole embryo, mainly head .a 967 to 1422 457 to 1   fully sequenced,   457/457
(100 %)
1 diff
(99.8 %id)
AW248896 lung, small cell carcinoma .a 973 to 1457 494 to 11   AAA Possibly primed on the genome, locally A rich (16/20 A in genome downstream of last aligned base) 484/484
(100 %)
1 diff
(99.8 %id)
AA908710 carcinoid, lung .a 985 to 1429 433 to 1       433/433
(100 %)
22 diff
(95.0 %id)
AW027285 thymus, pooled .a 988 to 1308 315 to 638     Submitted on the opposite strand 324/638
(50 %)
13 diff
(98.0 %id)
BF110665 carcinoid, lung .a 1017 to 1308 9 to 301     Submitted on the opposite strand 293/301
(97 %)
6 diff
(98.1 %id)
BF528799 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1028 to 1735 109 to 829       694/1116
(62 %)
47 diff
(95.8 %id)
AW251005 lung, small cell carcinoma .a 1035 to 1432 398 to 1       398/398
(100 %)
4 diff
(99.0 %id)
AW615792 lung, small cell carcinoma .a 1068 to 1432 365 to 1       365/365
(100 %)
18 diff
(95.1 %id)
AW615666 lung, small cell carcinoma .a 1069 to 1454 379 to 1       379/421
(90 %)
23 diff
(94.6 %id)
BQ345132 nervous_tumor .a 1081 to 1393 1 to 309       309/309
(100 %)
14 diff
(95.5 %id)
BX101275 carcinoid, lung .a 1124 to 1459 334 to 1       334/334
(100 %)
4 diff
(98.9 %id)
AA350159 brain .a 1253 to 1583 1 to 332       332/332
(100 %)
3 diff
(99.1 %id)
CF454566 peripheral nervous system .a 1300 to 2069 28 to 797   tiling clone,   770/797
(96 %)
8 diff
(99.0 %id)
BX327647 Neuroblastoma Cot 25-normalized .a 1323 to 2258 1 to 923       923/923
(100 %)
26 diff
(97.2 %id)
T28315 colon, embryo .a 1348 to 1631 1 to 283       283/284
(99 %)
2 diff
(99.3 %id)
AW950513   .a 1357 to 1997 9 to 654       646/706
(91 %)
18 diff
(97.5 %id)
BQ340059 nervous_normal .a 1421 to 1731 1 to 310       310/310
(100 %)
12 diff
(96.2 %id)
BF959420 nervous_normal .a 1456 to 1731 12 to 287       276/287
(96 %)
6 diff
(98.0 %id)
BF923555 nervous_tumor .a 1555 to 1875 322 to 2     Submitted on the opposite strand 321/322
(99 %)
0 diff
(100 %id)
BF923569 nervous_tumor .a 1587 to 1885 1 to 299       299/299
(100 %)
7 diff
(97.7 %id)
BX394191 Neuroblastoma Cot 25-normalized .a 1670 to 2477 808 to 1       808/881
(91 %)
36 diff
(96.0 %id)
BF923581 nervous_tumor .a 1678 to 1859 190 to 3     Submitted on the opposite strand 188/194
(96 %)
0 diff
(100 %id)
AW297368   .a 1679 to 1967 306 to 18   AAA Possibly primed on the genome, locally A rich (16/20 A in genome downstream of last aligned base) 289/289
(100 %)
4 diff
(98.7 %id)
CX751466 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1810 to 2500 693 to 12   AAA Possibly primed on the genome, locally A rich (16/20 A in genome downstream of last aligned base) 682/818
(83 %)
13 diff
(98.5 %id)
AW247193 lung, small cell carcinoma .a 1964 to 2506 552 to 11   available from MGC, AAA Possibly primed on the genome, locally A rich (16/20 A in genome downstream of last aligned base) 542/542
(100 %)
1 diff
(99.9 %id)
N80432 multiple sclerosis lesions .a 1985 to 2268 1 to 284       284/432
(65 %)
1 diff
(99.8 %id)
CK903736 Islets of Langerhans, Pancreas .a 1989 to 2497 1 to 508       508/508
(100 %)
1 diff
(99.9 %id)
N80425 multiple sclerosis lesions .a 2000 to 2328 1 to 334       334/442
(75 %)
6 diff
(98.7 %id)
BI964068 Islets of Langerhans, Pancreas .a 2005 to 2504 1 to 499       499/500
(99 %)
2 diff
(99.6 %id)
AW071836 anaplastic oligodendroglioma, brain .a 2013 to 2513 506 to 7       500/506
(98 %)
0 diff
(100 %id)
DB544038 hippocampus .a 2031 to 2504 1 to 469     Submitted on the opposite strand 469/471
(99 %)
5 diff
(99.0 %id)
AI359957 anaplastic oligodendroglioma, brain .a 2034 to 2508 474 to 1       474/474
(100 %)
1 diff
(99.8 %id)
CR615179 Neuroblastoma Cot 10-normalized .a 2042 to 2513 1 to 472   tiling clone,   472/472
(100 %)
0 diff
(100 %id)
BX331307 Neuroblastoma Cot 10-normalized .a 2043 to 2510 1 to 467       467/470
(99 %)
5 diff
(99.0 %id)
BX386863 Neuroblastoma Cot 10-normalized .a 2043 to 2510 1 to 467       467/470
(99 %)
5 diff
(99.0 %id)
AI361638 anaplastic oligodendroglioma, brain .a 2060 to 2508 448 to 1       448/448
(100 %)
1 diff
(99.8 %id)
AI299365 carcinoid, lung .a 2064 to 2513 450 to 3       448/450
(99 %)
0 diff
(100 %id)
AA826434 carcinoid, lung .a 2067 to 2511 457 to 14   AAA Possibly primed on the genome, locally A rich (16/20 A in genome downstream of last aligned base) 444/444
(100 %)
2 diff
(99.6 %id)
BI963793 Islets of Langerhans, Pancreas .a 2075 to 2500 440 to 16   AAA Possibly primed on the genome, locally A rich (16/20 A in genome downstream of last aligned base) 425/425
(100 %)
1 diff
(99.8 %id)
AI348578 carcinoid, lung .a 2106 to 2506 413 to 14   AAA Possibly primed on the genome, locally A rich (16/20 A in genome downstream of last aligned base) 400/400
(100 %)
1 diff
(99.8 %id)
AA911550 carcinoid, lung .a 2161 to 2513 352 to 1       352/352
(100 %)
3 diff
(99.2 %id)
AA350158 brain .a 2165 to 2506 341 to 1       341/341
(100 %)
1 diff
(99.8 %id)
AI864378 anaplastic oligodendroglioma, brain .a 2252 to 2513 262 to 2       261/262
(99 %)
0 diff
(100 %id)
BG056343 brain, glioblastoma with probably TP53 mutation andwithout EGFR amplification .a 2351 to 2512 161 to 1       161/161
(100 %)
1 diff
(99.4 %id)
AI933318 anaplastic oligodendroglioma, brain Gene ASCL1, variant not shown         Suspected internal deletion, this clone was ignored    
BE502909 carcinoid, lung Gene ASCL1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BE791033 lung, small cell carcinoma Gene ASCL1, variant not shown         Suspected internal deletion, this clone was ignored    
BI117134 lung, small cell carcinoma Gene ASCL1, variant not shown         Suspected internal deletion, this clone was ignored    
BQ891949 brain, neuroblastoma, cell line Gene ASCL1, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes DCI