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Gene ASCC3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
259 supporting clones for gene ASCC3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB496244 hypothalamus .a 1 to 468 1 to 468   tiling clone,   468/468
(100 %)
2 diff
(99.6 %id)
NM_006828.2   .a 1 to 7598 1 to 7598 exact RefSeq,   7598/7598
(100 %)
4 diff
(100.0 %id)
BX473624   .a 21 to 539 12 to 530   tiling clone,   519/530
(97 %)
6 diff
(98.9 %id)
DA367894 subthalamic nucleus .a 49 to 592 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DR001640 fetal brain .a 69 to 649 1 to 581       581/581
(100 %)
4 diff
(99.4 %id)
BX473814   .a 74 to 788 1 to 714       714/714
(100 %)
4 diff
(99.5 %id)
AI540859 Tissue culture .a 213 to 578 13 to 380       368/895
(41 %)
10 diff
(98.9 %id)
AL834463 melanoma (MeWo cell line) .a 292 to 7588 1 to 7297 L146F P444S P750S tiling clone, available from DKFZ, AAA   7297/7297
(100 %)
5 diff
(100.0 %id)
CN255848 embryonic stem cells, cell lines H1, H7, andH9 .a 327 to 979 1 to 652   tiling clone,   652/652
(100 %)
3 diff
(99.6 %id)
AA563682 colon .a 702 to 1123 432 to 11   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 422/432
(97 %)
0 diff
(100 %id)
AW749185 breast .a 746 to 1151 14 to 417       404/448
(90 %)
18 diff
(96.0 %id)
CF143371 lymph .a 830 to 1381 8 to 559       552/559
(98 %)
6 diff
(99.0 %id)
TI_154174759   .a 830 to 1490 80 to 740       661/662
(99 %)
5 diff
(99.3 %id)
CN255841 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 896 to 1590 16 to 710       695/710
(97 %)
6 diff
(99.2 %id)
AY013288   .a 1158 to 7593 1 to 6437   tiling clone, AAA   6437/6437
(100 %)
4 diff
(100.0 %id)
BE503088 carcinoid, lung .a 1344 to 1455 112 to 1       112/112
(100 %)
0 diff
(100 %id)
FN091238 breast carcinoma .a 1545 to 1597 1 to 53       53/54
(98 %)
1 diff
(98.2 %id)
CD656672 Embryonic Stem cells .a 1610 to 2438 1 to 831       831/832
(99 %)
15 diff
(98.2 %id)
BF353157 head_neck .a 1716 to 2194 17 to 494       482/494
(97 %)
14 diff
(97.2 %id)
BF328293 breast_normal .a 2074 to 2458 17 to 401       385/401
(96 %)
7 diff
(98.3 %id)
CN255846 embryonic stem cells, cell lines H1, H7, andH9 .a 2712 to 3203 1 to 492       492/492
(100 %)
0 diff
(100 %id)
AI421540 brain, glioblastoma (pooled) .a 2719 to 3010 340 to 49   AAA   292/312
(93 %)
0 diff
(100 %id)
CD657031 Embryonic Stem cells .a 2853 to 3652 57 to 851       795/895
(88 %)
13 diff
(98.6 %id)
CD643550 Embryonic Stem cells .a 2953 to 3652 8 to 704       697/831
(83 %)
12 diff
(98.6 %id)
DB097916 testis .a 2954 to 3462 2 to 510   capped   509/509
(100 %)
0 diff
(100 %id)
AI580090 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3090 to 3742 656 to 1       656/656
(100 %)
8 diff
(98.8 %id)
AJ223948 tumor-melanoma .a 3138 to 7593 1 to 4457   tiling clone, AAA   4457/4457
(100 %)
5 diff
(99.9 %id)
BU175559 embryonal carcinoma, cell line, testis .a 3183 to 3890 1 to 716       716/968
(73 %)
19 diff
(98.1 %id)
AW500519 lymph .a 3197 to 3816 8 to 627       620/627
(98 %)
7 diff
(98.9 %id)
TI_154154792   .a 3197 to 3836 80 to 719       640/640
(100 %)
2 diff
(99.7 %id)
AW501468 lymph .a 3282 to 3851 7 to 576       570/576
(98 %)
6 diff
(99.0 %id)
TI_154156418   .a 3282 to 3884 79 to 681       603/612
(98 %)
1 diff
(99.9 %id)
BX495052 Liver .a 3370 to 4209 1 to 841       841/843
(99 %)
9 diff
(99.0 %id)
CD657389 Embryonic Stem cells .a 3499 to 4269 12 to 782       771/782
(98 %)
11 diff
(98.6 %id)
CD655911 Embryonic Stem cells .a 3517 to 4330 12 to 818       807/841
(95 %)
20 diff
(97.7 %id)
DA567891   .a 3643 to 4190 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
DB063460 testis .a 3738 to 4274 2 to 539   capped   538/538
(100 %)
3 diff
(99.5 %id)
BG176920 lymph, lymphoma, cell line .a 3808 to 4457 1 to 651       651/951
(68 %)
12 diff
(98.8 %id)
CN255847 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3812 to 4169 1 to 358       358/358
(100 %)
1 diff
(99.8 %id)
DA390056 thalamus .a 3821 to 4362 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
AW361261 colon .a 3837 to 4245 414 to 6       409/425
(96 %)
1 diff
(99.8 %id)
CN255845 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3881 to 4372 16 to 507       492/507
(97 %)
7 diff
(98.7 %id)
BQ212322 melanotic melanoma, skin .a 3881 to 4705 1 to 833       833/909
(91 %)
21 diff
(97.7 %id)
DA461237 tongue, tumor tissue .a 3995 to 4575 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
AA320072 adipose tissue, white .a 4043 to 4285 1 to 244       244/244
(100 %)
1 diff
(99.6 %id)
DB074979 testis .a 4045 to 4582 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DB218372 trachea .a 4188 to 4724 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA182894 amygdala .a 4190 to 4740 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
AU133001   .a 4232 to 5087 2 to 861   capped   860/864
(99 %)
10 diff
(98.9 %id)
BQ350087 head_neck .a 4247 to 4701 473 to 20       454/473
(95 %)
2 diff
(99.6 %id)
CN255838 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4270 to 4700 1 to 431       431/431
(100 %)
0 diff
(100 %id)
DA119075 cerebellum .a 4435 to 4985 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
BU430202 lymph .a 4470 to 4935 8 to 473       466/473
(98 %)
7 diff
(98.6 %id)
TI_154151501   .a 4470 to 5108 80 to 718       639/657
(97 %)
13 diff
(98.1 %id)
BG176829 lymph, lymphoma, cell line .a 4488 to 5114 1 to 632       632/902
(70 %)
10 diff
(98.9 %id)
CN255842 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 4522 to 5090 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
BI087207 cervix .a 4543 to 5114 1 to 579       577/660
(87 %)
16 diff
(97.6 %id)
CN255849 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 4554 to 5000 1 to 447       447/447
(100 %)
1 diff
(99.8 %id)
CF121691 lymph .a 4559 to 5253 1 to 694       694/694
(100 %)
6 diff
(99.2 %id)
CF144214 lymph .a 4559 to 4761 1 to 203       203/204
(99 %)
14 diff
(93.2 %id)
TI_154180917   .a 4566 to 5385 70 to 888       819/820
(99 %)
3 diff
(99.7 %id)
BM819198 stomach .a 4799 to 5394 1 to 595       595/595
(100 %)
2 diff
(99.7 %id)
CN255843 embryonic stem cells, cell lines H1, H7, andH9 .a 4854 to 5567 1 to 714       714/714
(100 %)
0 diff
(100 %id)
DA477788   .a 4965 to 5536 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BI261123 cervical carcinoma cell line, cervix .a 4974 to 5743 47 to 814       767/819
(93 %)
21 diff
(97.5 %id)
BQ436047 embryonal carcinoma, cell line, testis .a 4981 to 5880 1 to 900       900/937
(96 %)
7 diff
(99.3 %id)
BP343882 synovial membrane .a 4984 to 5558 1 to 574       574/574
(100 %)
4 diff
(99.4 %id)
BP289136 lung .a 5008 to 5590 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
CN255839 embryonic stem cells, DMSO-treated H9 cellline .a 5130 to 5821 1 to 692       692/692
(100 %)
0 diff
(100 %id)
DA836136 placenta .a 5131 to 5614 2 to 486   capped   485/485
(100 %)
1 diff
(99.8 %id)
DA311225 hippocampus .a 5268 to 5833 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
BE617093 adenocarcinoma, colon .a 5306 to 5880 1 to 570       570/598
(95 %)
14 diff
(97.7 %id)
C02797 heart .a 5325 to 5642 1 to 319       319/327
(97 %)
7 diff
(97.9 %id)
C03107 heart .a 5325 to 5733 1 to 411       411/411
(100 %)
8 diff
(98.1 %id)
BG945340 amnion_normal .a 5402 to 5986 585 to 8       578/596
(96 %)
12 diff
(98.0 %id)
AW361225 colon .a 5408 to 5879 488 to 14       475/488
(97 %)
7 diff
(98.6 %id)
BP335462 coronary artery .a 5410 to 5997 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DA385757 thalamus .a 5422 to 6014 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
BJ996343 hepatoblastoma .a 5455 to 5944 1 to 490       490/490
(100 %)
0 diff
(100 %id)
DA601583   .a 5461 to 6036 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
BM786469 Ascites, stomach .a 5510 to 6091 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BF338668 brain, glioblastoma with EGFR amplification .a 5518 to 6109 1 to 590       590/887
(66 %)
6 diff
(99.4 %id)
BP344254 synovial membrane .a 5539 to 6071 1 to 532       532/568
(93 %)
26 diff
(95.5 %id)
BX415630 thymus .a 5542 to 6405 1 to 864       864/864
(100 %)
1 diff
(99.9 %id)
CB161288 Liver .a 5559 to 6128 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DA469196   .a 5567 to 6123 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA830525 placenta .a 5580 to 6177 2 to 610   capped   607/670
(90 %)
16 diff
(97.7 %id)
CD699491 normal nasopharynx .a 5582 to 6051 15 to 487       473/487
(97 %)
13 diff
(97.4 %id)
DA829486 placenta .a 5591 to 6222 2 to 640   capped   639/661
(96 %)
21 diff
(96.9 %id)
BQ720311 sympathetic trunk .a 5593 to 6456 1 to 865       865/865
(100 %)
4 diff
(99.6 %id)
BQ719321 sympathetic trunk .a 5593 to 6357 1 to 775       775/943
(82 %)
24 diff
(97.5 %id)
BP299375   .a 5706 to 6283 1 to 582       582/582
(100 %)
10 diff
(98.3 %id)
DA001947   .a 5732 to 6280 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BP303090   .a 5771 to 6350 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
R97884 liver and spleen .a 5844 to 6226 1 to 383       383/394
(97 %)
5 diff
(98.8 %id)
BU194112 bone marrow, from acute myelogenous leukemia .a 5844 to 6602 1 to 762       762/771
(98 %)
19 diff
(97.6 %id)
BG207212   .a 5877 to 6658 1 to 781       781/781
(100 %)
11 diff
(98.6 %id)
AA216608 brain, neuroepithelial cells .a 5887 to 6178 1 to 296       296/296
(100 %)
7 diff
(97.7 %id)
AA232371 brain, neuroepithelial cells .a 5887 to 6227 1 to 341       341/341
(100 %)
1 diff
(99.8 %id)
BG674606 skin .a 5919 to 6781 1 to 868       868/873
(99 %)
21 diff
(97.6 %id)
AA182699   .a 5944 to 6361 1 to 418       418/418
(100 %)
5 diff
(98.9 %id)
BP290446 lung .a 5963 to 6501 1 to 539       539/585
(92 %)
11 diff
(98.2 %id)
AA476560   .a 5993 to 6158 1 to 166       166/166
(100 %)
15 diff
(91.0 %id)
BM763262 myeloma .a 6035 to 6763 1 to 729       729/729
(100 %)
3 diff
(99.6 %id)
BM839886 myeloma .a 6035 to 6661 1 to 626       626/626
(100 %)
4 diff
(99.4 %id)
BM840843 myeloma .a 6035 to 6588 1 to 554       554/554
(100 %)
3 diff
(99.5 %id)
BM847107 myeloma .a 6035 to 6610 1 to 576       576/576
(100 %)
5 diff
(99.2 %id)
BE567399 bladder, carcinoma, cell line .a 6047 to 6620 1 to 578       578/720
(80 %)
17 diff
(97.7 %id)
BC039857 Prostate, adenocarcinoma. .a 6057 to 7588 1 to 1532   available from MGC, AAA   1532/1532
(100 %)
5 diff
(99.7 %id)
BG285295 adenocarcinoma, cell line, Prostate .a 6060 to 6783 13 to 733   available from MGC,   721/735
(98 %)
12 diff
(98.4 %id)
BF307620 muscle, rhabdomyosarcoma .a 6102 to 6793 1 to 690       690/952
(72 %)
21 diff
(97.8 %id)
BG535684 lung .a 6113 to 6845 1 to 745       745/905
(82 %)
36 diff
(96.1 %id)
BF218789 brain, glioblastoma .a 6131 to 6677 1 to 550       550/751
(73 %)
9 diff
(98.9 %id)
BX115485 liver and spleen .a 6149 to 6869 1 to 721       721/721
(100 %)
1 diff
(99.9 %id)
H60986 liver and spleen .a 6149 to 6612 1 to 485       485/486
(99 %)
29 diff
(94.1 %id)
CK906074 Islets of Langerhans, Pancreas .a 6176 to 6769 1 to 594       594/594
(100 %)
0 diff
(100 %id)
BM127434 Islets of Langerhans, Pancreas .a 6192 to 6761 1 to 570       570/570
(100 %)
0 diff
(100 %id)
AW970501   .a 6279 to 6846 26 to 593       568/594
(95 %)
12 diff
(98.0 %id)
BC014358 Kidney, hypernephroma .a 6290 to 7591 1 to 1302   available from MGC, AAA   1302/1302
(100 %)
3 diff
(99.8 %id)
BF030420 hypernephroma, Kidney .a 6313 to 6946 1 to 650   available from MGC,   613/650
(94 %)
26 diff
(96.0 %id)
BM726216 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 6343 to 6956 1 to 614       614/614
(100 %)
1 diff
(99.9 %id)
TI_151725641   .a 6405 to 7181 828 to 56       773/846
(91 %)
13 diff
(98.5 %id)
BE081644 breast .a 6406 to 6760 357 to 4     Submitted on the opposite strand 354/363
(97 %)
0 diff
(100 %id)
EH341010   .a 6417 to 6494 1 to 78       78/78
(100 %)
1 diff
(98.8 %id)
CN255844 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 6428 to 7122 1 to 697       697/697
(100 %)
3 diff
(99.6 %id)
BM728921 eye, fetal eye .a 6453 to 7064 1 to 612   fully sequenced,   612/612
(100 %)
1 diff
(99.9 %id)
BG432746 Kidney .a 6481 to 7155 1 to 673       673/673
(100 %)
3 diff
(99.6 %id)
CD702640 normal nasopharynx .a 6528 to 7100 31 to 604       574/604
(95 %)
10 diff
(98.4 %id)
AW856166 colon .a 6553 to 6835 1 to 283       283/295
(95 %)
6 diff
(98.0 %id)
BF339742 brain, glioblastoma with EGFR amplification .a 6605 to 7288 1 to 683       683/1015
(67 %)
19 diff
(98.2 %id)
FN140014 breast carcinoma .a 6679 to 6773 1 to 95       95/95
(100 %)
1 diff
(99.0 %id)
FN055366 breast carcinoma .a 6693 to 6779 1 to 87       87/87
(100 %)
1 diff
(98.9 %id)
FN074375 breast carcinoma .a 6693 to 6780 1 to 86       86/86
(100 %)
3 diff
(96.6 %id)
BX473625   .a 6902 to 7588 703 to 18   AAA   686/686
(100 %)
2 diff
(99.8 %id)
AU154422   .a 7013 to 7588 571 to 1       571/571
(100 %)
7 diff
(98.8 %id)
DB375750 placenta .a 7024 to 7591 572 to 1       572/574
(99 %)
30 diff
(94.8 %id)
BU742942 eye, fetal eye .a 7034 to 7551 515 to 1   fully sequenced,   515/515
(100 %)
10 diff
(98.1 %id)
DB374333 placenta .a 7076 to 7591 509 to 1       509/512
(99 %)
15 diff
(97.1 %id)
AA179261   .a 7118 to 7588 473 to 1       473/474
(99 %)
17 diff
(96.5 %id)
BX415629 thymus .a 7158 to 8096 939 to 1   tiling clone,   939/940
(99 %)
5 diff
(99.5 %id)
H61559 liver and spleen .a 7204 to 7590 406 to 1       406/408
(99 %)
25 diff
(93.9 %id)
AA232372 brain, neuroepithelial cells .a 7742 to 8110 369 to 1       369/369
(100 %)
1 diff
(99.8 %id)
AA216718 brain, neuroepithelial cells .a 7814 to 8110 298 to 1   tiling clone,   298/306
(97 %)
2 diff
(99.4 %id)
AK299117   .b 1 to 3618 1 to 3618 L48F S880P tiling clone,   3618/3618
(100 %)
3 diff
(100.0 %id)
DC370122   .b 1 to 563 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
BX490017   .b 7 to 299 1 to 295       295/295
(100 %)
4 diff
(98.7 %id)
DC426302   .b 3135 to 3618 484 to 1       484/492
(98 %)
0 diff
(100 %id)
BG718109 testis .c 1 to 683 1 to 683   tiling clone, available from MGC,   683/683
(100 %)
5 diff
(99.3 %id)
BC026066 testis .c 6 to 2830 6 to 2830 G86E V582A tiling clone, available from MGC, AAA   2825/2825
(100 %)
4 diff
(99.9 %id)
AK307903 subthalamic nucleus .d 1 to 1227 1 to 1228 G164W K165* tiling clone,   1228/1228
(100 %)
2 diff
(99.9 %id)
AW372560 breast .d 639 to 1189 1 to 554   tiling clone,   554/554
(100 %)
27 diff
(95.2 %id)
BQ082002 Ascites, stomach .e 1 to 441 1 to 441   tiling clone,   441/441
(100 %)
4 diff
(99.1 %id)
BX510075   .e 20 to 559 1 to 541   tiling clone,   541/541
(100 %)
3 diff
(99.5 %id)
CK000797 mixed .e 68 to 824 8 to 761 S142X T147Y M152K E154K E156N ... tiling clone,   754/786
(95 %)
19 diff
(97.6 %id)
NM_022091.3   .f 1 to 3470 1 to 3470 exact RefSeq,   3470/3470
(100 %)
0 diff
(100 %id)
DR002226 fetal brain .f 33 to 783 1 to 751 exact tiling clone,   751/751
(100 %)
8 diff
(99.0 %id)
AK315197 thymus .f 44 to 665 1 to 623 exact     623/623
(100 %)
2 diff
(99.7 %id)
DB143538 thymus .f 45 to 610 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BC050681 Skin, melanotic melanoma. .f 76 to 757 1 to 682 exact available from MGC, AAA   682/682
(100 %)
0 diff
(100 %id)
BU194089 melanotic melanoma, skin .f 85 to 762 1 to 678 N67H available from MGC, AAA   678/678
(100 %)
10 diff
(98.6 %id)
BC125211 PCR rescued clones .f 218 to 3415 1 to 3198 exact tiling clone,   3198/3199
(99 %)
5 diff
(99.9 %id)
BC125212 PCR rescued clones .f 218 to 3415 1 to 3200 exact     3200/3201
(99 %)
6 diff
(99.9 %id)
BC130038 PCR rescued clones .f 218 to 3415 1 to 3197 M63C Q64K S65V I66* tiling clone,   3197/3197
(100 %)
2 diff
(100.0 %id)
BG200591   .f 289 to 847 567 to 9 exact   Submitted on the opposite strand 559/567
(98 %)
3 diff
(99.5 %id)
EL734719 mixed .f 330 to 669 1 to 340 exact     340/498
(68 %)
3 diff
(99.4 %id)
TI_1948209973   .f 330 to 669 127 to 466 R102*     340/704
(48 %)
10 diff
(98.6 %id)
TI_1948210177   .f 330 to 664 136 to 470       335/1356
(24 %)
12 diff
(99.2 %id)
AK023189   .f 391 to 3466 1 to 3073   available from FLJ,   3073/3073
(100 %)
8 diff
(99.8 %id)
AU131618   .f 392 to 1205 2 to 820   capped   819/819
(100 %)
13 diff
(98.5 %id)
DA131438 alzheimer cortex .f 1211 to 1830 2 to 622   capped   621/621
(100 %)
3 diff
(99.6 %id)
BG941712 blood .f 1866 to 2123 1 to 258       258/258
(100 %)
0 diff
(100 %id)
BQ372893 prostate_tumor .f 2161 to 2698 539 to 1       539/539
(100 %)
26 diff
(95.2 %id)
TI_149305724   .f 2688 to 3469 867 to 88   AAA   780/967
(80 %)
7 diff
(99.3 %id)
AU153330   .f 2900 to 3466 564 to 1       564/571
(98 %)
10 diff
(98.3 %id)
AI653055 pooled germ cell tumors .f 2936 to 3465 538 to 9       530/538
(98 %)
0 diff
(100 %id)
BF593403 pooled germ cell tumors .f 2977 to 3469 493 to 1       493/493
(100 %)
0 diff
(100 %id)
DB567265 hypothalamus .f 3013 to 3467 1 to 455     Submitted on the opposite strand 455/457
(99 %)
3 diff
(99.4 %id)
AI206286 pooled germ cell tumors .f 3032 to 3469 438 to 1       438/438
(100 %)
0 diff
(100 %id)
AW137083   .f 3037 to 3469 450 to 18   AAA   433/433
(100 %)
1 diff
(99.8 %id)
AI206167 pooled germ cell tumors .f 3040 to 3470 431 to 1   tiling clone,   431/431
(100 %)
0 diff
(100 %id)
AI825389 pooled germ cell tumors .f 3174 to 3469 296 to 1       296/296
(100 %)
1 diff
(99.7 %id)
AI635444 Kidney, renal cell tumor .f 3284 to 3466 222 to 40   AAA   183/183
(100 %)
3 diff
(98.4 %id)
BU665020 blood .f 3454 to 4122 26 to 694   tiling clone,   669/694
(96 %)
6 diff
(99.2 %id)
CR936692 salivary gland .g-u 1 to 4374 1 to 4374 exact tiling clone, AAA   4374/4374
(100 %)
5 diff
(99.9 %id)
CB122307 Liver .h 1 to 537 1 to 537   tiling clone,   537/537
(100 %)
0 diff
(100 %id)
FN068519 breast carcinoma .h 156 to 260 107 to 1     Submitted on the opposite strand 107/107
(100 %)
2 diff
(98.2 %id)
CB124488 Liver .h 290 to 982 1 to 693   tiling clone,   693/693
(100 %)
0 diff
(100 %id)
TI_149310294   .h 665 to 1467 904 to 103   AAA   802/915
(87 %)
9 diff
(99.1 %id)
BF665941 brain, primitive neuroectoderm .h 678 to 1367 1 to 693       693/696
(99 %)
35 diff
(95.0 %id)
TI_149293519   .h 698 to 1464 844 to 86   AAA   759/961
(78 %)
10 diff
(99.0 %id)
N95511 multiple sclerosis lesions .h 712 to 1085 1 to 372   fully sequenced,   372/372
(100 %)
2 diff
(99.5 %id)
BG215876   .h 735 to 1472 784 to 49     Submitted on the opposite strand 736/785
(93 %)
0 diff
(100 %id)
BG216918   .h 746 to 1471 742 to 14     Submitted on the opposite strand 729/795
(91 %)
0 diff
(100 %id)
AA483367 Ewing's sarcoma .h 760 to 1180 1 to 421       421/421
(100 %)
2 diff
(99.6 %id)
AA039251 uterus .h 761 to 921 1 to 161       161/161
(100 %)
0 diff
(100 %id)
BU682647 lung .h 769 to 1464 713 to 19   AAA   695/695
(100 %)
1 diff
(99.9 %id)
R31160 placenta .h 776 to 1105 1 to 337       337/341
(98 %)
12 diff
(96.5 %id)
CA427351 Cell Line, Chondrosarcoma .h 785 to 1464 696 to 19   AAA   678/678
(100 %)
4 diff
(99.5 %id)
BQ720822 sympathetic trunk .h 813 to 1722 1 to 912 N46K I47Y L50T I51H C52L ... tiling clone,   912/912
(100 %)
7 diff
(99.3 %id)
CB161009 Liver .h 845 to 1414 1 to 570       570/570
(100 %)
0 diff
(100 %id)
CN255840 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .h 847 to 1525 1 to 679       679/679
(100 %)
1 diff
(99.9 %id)
BE904890 epithelioid carcinoma, Pancreas .h 848 to 1584 1 to 731       731/732
(99 %)
21 diff
(97.2 %id)
DN911914   .h 904 to 1457 556 to 3       554/556
(99 %)
0 diff
(100 %id)
AA156961.
matches multiple genes
uterus .h 906 to 1464 549 to 1     also hits gene CLN5 549/619
(88 %)
17 diff
(97.3 %id)
BU688613 lung, Primary Lung Epithelial Cells .h 922 to 1467 561 to 16   AAA   546/546
(100 %)
0 diff
(100 %id)
AI768177 pooled .h 928 to 1463 539 to 1       539/539
(100 %)
5 diff
(99.1 %id)
BF062665 colon, colon tumor, RER+ .h 933 to 1464 532 to 1       532/532
(100 %)
1 diff
(99.9 %id)
BQ023443 placenta .h 933 to 1464 550 to 19   AAA   532/532
(100 %)
0 diff
(100 %id)
AA843138 parathyroid gland, parathyroid tumor .h 952 to 1471 522 to 3       520/522
(99 %)
0 diff
(100 %id)
BF207813 bladder, carcinoma, cell line .h 959 to 1471 1 to 503       503/674
(74 %)
24 diff
(96.5 %id)
AA889461 parathyroid gland, parathyroid tumor .h 960 to 1466 508 to 2       507/508
(99 %)
0 diff
(100 %id)
AI889749 adenocarcinoma, Pancreas .h 985 to 1464 480 to 1       480/480
(100 %)
0 diff
(100 %id)
AI674903 adenocarcinoma, Pancreas .h 992 to 1464 473 to 1       473/473
(100 %)
0 diff
(100 %id)
AI471506 colon, moderately-differentiated adenocarcinoma .h 993 to 1465 493 to 21   AAA   473/473
(100 %)
4 diff
(99.2 %id)
AI028104 parathyroid gland, parathyroid tumor .h 1001 to 1466 470 to 5       466/470
(99 %)
0 diff
(100 %id)
AI220360 pooled .h 1008 to 1466 460 to 2       459/460
(99 %)
0 diff
(100 %id)
AW150753 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h 1008 to 1464 473 to 17   AAA   457/457
(100 %)
1 diff
(99.8 %id)
W70070 heart .h 1012 to 1464 456 to 1       456/456
(100 %)
4 diff
(99.2 %id)
AI033773 parathyroid gland, parathyroid tumor .h 1013 to 1466 458 to 5       454/458
(99 %)
0 diff
(100 %id)
BP224200 colon mucosa .h 1034 to 1471 1 to 438       438/556
(78 %)
2 diff
(99.7 %id)
AI281483 lymph node, mantle cell lymphoma .h 1036 to 1466 432 to 2       431/432
(99 %)
0 diff
(100 %id)
AI193003 lung .h 1038 to 1466 430 to 2       429/430
(99 %)
0 diff
(100 %id)
BF062484 colon, colon tumor, RER+ .h 1046 to 1466 421 to 1       421/421
(100 %)
4 diff
(99.1 %id)
AA908238 carcinoid, lung .h 1052 to 1466 416 to 2       415/416
(99 %)
0 diff
(100 %id)
N58930 multiple sclerosis lesions .h 1055 to 1467 413 to 1   fully sequenced,   413/413
(100 %)
0 diff
(100 %id)
AA928942 carcinoid, lung .h 1068 to 1466 399 to 1       399/399
(100 %)
12 diff
(97.0 %id)
AA989030 carcinoid, lung .h 1074 to 1464 391 to 1       391/391
(100 %)
0 diff
(100 %id)
AA904941 pooled .h 1083 to 1466 385 to 2       384/385
(99 %)
0 diff
(100 %id)
AW291611   .h 1091 to 1467 394 to 18   AAA   377/377
(100 %)
2 diff
(99.5 %id)
BF110963 carcinoid, lung .h 1106 to 1467 397 to 32   AAA   366/366
(100 %)
6 diff
(98.4 %id)
AI803859 serous papillary carcinoma, high grade, 2pooled tumors, uterus .h 1134 to 1471 342 to 4       339/342
(99 %)
0 diff
(100 %id)
AA405505   .h 1136 to 1464 346 to 18   AAA   329/329
(100 %)
0 diff
(100 %id)
AA632279 breast .h 1137 to 1464 367 to 40   AAA   328/328
(100 %)
0 diff
(100 %id)
AI659742 Prostate .h 1138 to 1464 327 to 1       327/327
(100 %)
0 diff
(100 %id)
FN129025 breast carcinoma .h 1143 to 1219 78 to 1     Submitted on the opposite strand 78/79
(98 %)
1 diff
(98.8 %id)
AA854670 parathyroid gland, parathyroid tumor .h 1144 to 1466 325 to 3       323/325
(99 %)
0 diff
(100 %id)
AA772373 parathyroid gland, parathyroid tumor .h 1150 to 1466 322 to 6       317/322
(98 %)
0 diff
(100 %id)
AA808502 germinal center B cell .h 1201 to 1471 275 to 4       272/275
(98 %)
0 diff
(100 %id)
AI765210 2 pooled tumors (clear cell type), Kidney .h 1219 to 1752 562 to 27 L41S L42A P43S N45* AAA   536/536
(100 %)
6 diff
(98.9 %id)
BE041501 pooled .h 1228 to 1467 256 to 15   AAA   242/242
(100 %)
3 diff
(98.8 %id)
FN167227 breast carcinoma .h 1230 to 1326 1 to 97       97/97
(100 %)
0 diff
(100 %id)
AI768311 pooled .h 1248 to 1471 224 to 1       224/224
(100 %)
9 diff
(96.0 %id)
AI915222 serous papillary carcinoma, high grade, 2pooled tumors, uterus .h 1260 to 1465 230 to 25   AAA   206/206
(100 %)
2 diff
(99.1 %id)
FN090318 breast carcinoma .h 1329 to 1431 1 to 102       102/102
(100 %)
1 diff
(99.1 %id)
AA551688 colon .h 1331 to 1469 139 to 1       139/139
(100 %)
0 diff
(100 %id)
FN092722 breast carcinoma .h 1355 to 1429 73 to 1     Submitted on the opposite strand 73/76
(96 %)
2 diff
(97.4 %id)
AW976309   .h 1365 to 2002 638 to 1 E2S N7T N10T I14F E24K ... tiling clone, Submitted on the opposite strand 638/638
(100 %)
11 diff
(98.3 %id)
BE004909 breast_normal .h 1461 to 1774 332 to 17     Submitted on the opposite strand 316/339
(93 %)
0 diff
(100 %id)
BE004608 breast_normal .h 1463 to 1759 297 to 1     Submitted on the opposite strand 297/305
(97 %)
26 diff
(91.5 %id)
BE815027 breast_normal .h 1464 to 1750 295 to 1       295/351
(84 %)
21 diff
(94.1 %id)
BE004554 breast_normal .h 1469 to 1774 348 to 41     Submitted on the opposite strand 308/348
(88 %)
0 diff
(100 %id)
BQ312829 breast_normal .h 1469 to 1774 333 to 21       313/333
(93 %)
0 diff
(100 %id)
BE004846 breast_normal .h 1490 to 1760 27 to 299       273/299
(91 %)
6 diff
(98.0 %id)
BM783381 stomach .h 1557 to 2000 1 to 444       444/444
(100 %)
1 diff
(99.8 %id)
BQ023090 placenta .h 1607 to 2003 415 to 19   AAA   397/397
(100 %)
1 diff
(99.8 %id)
BF431792 pooled .h 1613 to 2005 393 to 1   tiling clone,   393/393
(100 %)
0 diff
(100 %id)
AA219556 brain, neuroepithelial cells .h 1647 to 1986 341 to 1       341/341
(100 %)
2 diff
(99.5 %id)
AA788717 bone marrow stroma .h 1673 to 2003 344 to 14   AAA   331/331
(100 %)
0 diff
(100 %id)
AA749406 germinal center B cell .h 1759 to 2003 255 to 11   AAA   245/245
(100 %)
0 diff
(100 %id)
DB289843 uterus .i-u 1 to 581 2 to 582 exact tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
DA014805 adrenal gland .j 1 to 559 2 to 560 Y72H tiling clone, capped   559/562
(99 %)
3 diff
(99.5 %id)
CD485513   .l-u 1 to 414 1 to 413 I24F T33I M37T tiling clone,   413/413
(100 %)
4 diff
(99.1 %id)
CN255837 embryonic stem cells, cell lines H1, H7, andH9 Gene ASCC3, variant not shown         This clone was ignored    
CV349586 marrow Gene ASCC3, variant not shown              
CV349590 marrow Gene ASCC3, variant not shown              
BP395908 pancreatic islet Gene ASCC3, variant not shown         Submitted on the opposite strand    
DB319659 lung Gene ASCC3, variant not shown         Suspected internal deletion, this clone was ignored    
DA594590 lung Gene ASCC3, variant not shown       capped Suspected internal deletion, this clone was ignored    
BF062402 pooled germ cell tumors Gene ASCC3, variant not shown              
DB144798 thymus Gene ASCC3, variant not shown       capped      
DB345653 thymus Gene ASCC3, variant not shown              
BU686034 lung, Primary Lung Epithelial Cells Gene ASCC3, variant not shown         This clone was ignored    
DB249963 uterus Gene ASCC3, variant not shown       capped This clone was ignored    
DB290176 uterus Gene ASCC3, variant not shown       capped This clone was ignored    
DB352991 uterus Gene ASCC3, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h, .i-u, .j, .k-u, .l-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI