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Gene ARV1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
234 supporting clones for gene ARV1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM548235 brain, hippocampus .a 1 to 881 17 to 903 T8I N249Q R250P K251* tiling clone,   887/1112
(79 %)
19 diff
(98.3 %id)
BG433742 Kidney .a 682 to 1124 1 to 443   tiling clone,   443/443
(100 %)
0 diff
(100 %id)
BX340897   .b 1 to 980 1 to 979 S7R G8A L9C Q10S Q11R ...     979/979
(100 %)
28 diff
(97.2 %id)
BM931169 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 6 to 676 1 to 671   tiling clone,   671/673
(99 %)
3 diff
(99.6 %id)
BM450739 eye, retinoblastoma .b 14 to 935 1 to 925   tiling clone,   925/1017
(90 %)
17 diff
(98.4 %id)
BM684617 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 720 to 1359 658 to 19   tiling clone, AAA   640/640
(100 %)
0 diff
(100 %id)
AK293049 uterus .c 1 to 989 1 to 989 exact tiling clone,   989/989
(100 %)
1 diff
(99.9 %id)
AF321442   .d 1 to 1328 7 to 1334 exact tiling clone, AAA   1328/1334
(99 %)
6 diff
(99.6 %id)
AV721798 hypothalamus .d 1 to 480 7 to 483       477/485
(98 %)
45 diff
(90.8 %id)
CB961726 placenta, pre-eclamptic placenta .d 20 to 732 24 to 736   tiling clone,   713/801
(89 %)
9 diff
(98.9 %id)
CB961970 placenta, pre-eclamptic placenta .d 20 to 730 24 to 739       716/762
(93 %)
15 diff
(98.1 %id)
BX952428   .d 21 to 541 1 to 521       521/521
(100 %)
2 diff
(99.7 %id)
BX952421   .d 21 to 543 1 to 523       523/523
(100 %)
3 diff
(99.5 %id)
DC421416 uterus .d 23 to 615 1 to 593       593/593
(100 %)
1 diff
(99.9 %id)
BF211184 bone marrow, from chronic myelogenous leukemia .d 24 to 557 1 to 537       536/541
(99 %)
21 diff
(96.2 %id)
BQ683888 melanotic melanoma, cell line, skin .d 25 to 879 10 to 868 N230T V238G V249A F251L F252L ...     859/932
(92 %)
19 diff
(98.0 %id)
TI_57214915   .d 27 to 766 28 to 769       742/769
(96 %)
19 diff
(97.6 %id)
TI_57171580   .d 28 to 1003 26 to 998 T217H S218Q N219I Q221R A222Q ...     973/1024
(95 %)
39 diff
(96.2 %id)
AF271780 hypothalamus .d 29 to 1328 1 to 1300 A182D AAA   1300/1300
(100 %)
3 diff
(99.8 %id)
AF290878   .d 29 to 1473 1 to 1445 exact tiling clone,   1445/1450
(99 %)
1 diff
(100.0 %id)
AA461156   .d 29 to 497 1 to 469       469/469
(100 %)
3 diff
(99.4 %id)
BI752530 brain .d 29 to 766 1 to 740       740/740
(100 %)
14 diff
(98.2 %id)
NM_022786.1   .d 29 to 1478 1 to 1450 exact RefSeq,   1450/1450
(100 %)
4 diff
(99.8 %id)
TI_57199315   .d 30 to 746 61 to 778       718/778
(92 %)
8 diff
(99.0 %id)
BP195228 brain .d 32 to 608 1 to 577       577/577
(100 %)
3 diff
(99.5 %id)
BC016309 Bone marrow, chronic myelogenous leukemia .d 34 to 1329 1 to 1296 exact available from MGC, AAA   1296/1296
(100 %)
1 diff
(100.0 %id)
BI821624 pooled brain, lung, testis .d 34 to 746 1 to 714       714/714
(100 %)
2 diff
(99.8 %id)
BM819997 stomach .d 36 to 505 1 to 470       470/478
(98 %)
9 diff
(98.2 %id)
BM820080 stomach .d 36 to 598 1 to 563       563/563
(100 %)
0 diff
(100 %id)
BM820217 stomach .d 36 to 696 1 to 661       661/661
(100 %)
0 diff
(100 %id)
BM832080 stomach .d 36 to 319 1 to 284       284/284
(100 %)
0 diff
(100 %id)
BI828191 brain, medulla .d 37 to 1003 1 to 964 T217H S218Q N219I Q221R A222Q ...     964/990
(97 %)
34 diff
(96.6 %id)
DA934039 Spleen .d 38 to 603 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BP248665 Kidney .d 40 to 628 1 to 588       588/588
(100 %)
3 diff
(99.5 %id)
BP352082   .d 40 to 622 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
AK026629   .d 41 to 473 1 to 433   available from FLJ, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 433/522
(82 %)
3 diff
(99.5 %id)
BG700499 brain, hippocampus .d 41 to 823 1 to 783       783/783
(100 %)
10 diff
(98.8 %id)
CF994624 Human Placenta, placenta .d 41 to 575 23 to 564       542/918
(59 %)
16 diff
(98.3 %id)
CF993878 Human Placenta, placenta .d 41 to 732 23 to 714       692/816
(84 %)
13 diff
(98.5 %id)
BP357721 mammary gland .d 41 to 621 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA947734 Spleen .d 42 to 611 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BE244023 leukopheresis .d 45 to 162 1 to 118       118/118
(100 %)
6 diff
(95.0 %id)
BM789612 stomach .d 46 to 680 1 to 634       634/634
(100 %)
1 diff
(99.9 %id)
BM790615 stomach .d 46 to 681 1 to 635       635/635
(100 %)
1 diff
(99.9 %id)
BM850620 stomach .d 46 to 595 1 to 549       549/549
(100 %)
3 diff
(99.5 %id)
CF139017 CNCAP(3)T-225 cell line, Prostate .d 47 to 539 1 to 493       493/493
(100 %)
4 diff
(99.2 %id)
BI544322 brain, hippocampus .d 47 to 824 1 to 778       778/779
(99 %)
7 diff
(99.2 %id)
DA899069 skeletal muscle .d 47 to 615 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
TI_44000358   .d 50 to 824 176 to 950       775/951
(81 %)
8 diff
(99.2 %id)
CB148680 Liver .d 50 to 541 1 to 492       492/492
(100 %)
1 diff
(99.8 %id)
DN991025 brain, whole brain .d 50 to 681 5 to 637       633/637
(99 %)
7 diff
(99.0 %id)
DA439943 tongue, tumor tissue .d 51 to 621 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA441192 tongue, tumor tissue .d 51 to 636 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
AA450388   .d 51 to 469 1 to 417       417/417
(100 %)
4 diff
(99.1 %id)
BQ268971 Pancreas, Purified pancreatic islet .d 51 to 652 1 to 602       602/602
(100 %)
3 diff
(99.6 %id)
TI_1948090520   .d 51 to 872 122 to 945   fully sequenced,   824/945
(87 %)
19 diff
(98.0 %id)
TI_1948090598   .d 51 to 382 124 to 455   fully sequenced,   332/353
(94 %)
6 diff
(98.4 %id)
TI_1948090697   .d 51 to 874 122 to 955 I198L W199L E200G H201T D202* fully sequenced,   834/955
(87 %)
38 diff
(96.1 %id)
TI_1948090783   .d 51 to 597 122 to 675   fully sequenced,   554/675
(82 %)
11 diff
(98.4 %id)
DB449799.
matches multiple genes
testis .d 53 to 502 1 to 446     also hits gene FAM89A 446/446
(100 %)
14 diff
(96.9 %id)
BG428359 Kidney .d 53 to 739 1 to 699       699/984
(71 %)
29 diff
(97.1 %id)
DB462848.
matches multiple genes
hippocampus .d 54 to 505 1 to 453     also hits gene FAM89A 453/455
(99 %)
16 diff
(96.5 %id)
H81967 melanocyte .d 54 to 246 1 to 192       192/195
(98 %)
5 diff
(97.5 %id)
TI_57219569   .d 54 to 556 26 to 531       506/534
(94 %)
10 diff
(98.2 %id)
TI_154169155   .d 54 to 558 80 to 584       505/506
(99 %)
1 diff
(99.9 %id)
BY798788 eye .d 55 to 659 1 to 605       605/605
(100 %)
0 diff
(100 %id)
BP339956 Spleen .d 55 to 634 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
BM702666 eye, Retina Foveal and Macular .d 55 to 565 1 to 511       511/511
(100 %)
0 diff
(100 %id)
AA001247 liver and spleen .d 57 to 654 1 to 603       603/603
(100 %)
11 diff
(98.2 %id)
CV028865 mixed .d 58 to 588 1 to 531       531/531
(100 %)
2 diff
(99.7 %id)
BI752733 brain .d 59 to 556 1 to 501       501/504
(99 %)
5 diff
(99.1 %id)
CB044665 colon, juvenile granulosa tumor .d 60 to 666 12 to 618       607/618
(98 %)
7 diff
(98.9 %id)
AA113971   .d 61 to 525 1 to 463       463/463
(100 %)
2 diff
(99.6 %id)
BI820482 pooled brain, lung, testis .d 61 to 730 1 to 676       676/682
(99 %)
23 diff
(96.7 %id)
BI818878 pooled brain, lung, testis .d 61 to 908 1 to 847       847/847
(100 %)
7 diff
(99.2 %id)
TI_57198855   .d 61 to 730 69 to 744       676/750
(90 %)
26 diff
(96.6 %id)
TI_57199855   .d 61 to 908 97 to 943       847/943
(89 %)
12 diff
(98.8 %id)
BF172601 blood .d 62 to 311 1 to 246       246/246
(100 %)
10 diff
(96.0 %id)
BF310004 muscle, rhabdomyosarcoma .d 62 to 801 1 to 742       742/1141
(65 %)
22 diff
(98.1 %id)
AA339064 brain .d 63 to 216 1 to 153       153/153
(100 %)
2 diff
(98.7 %id)
BI755130 brain .d 63 to 925 1 to 865       865/868
(99 %)
9 diff
(99.0 %id)
TI_57215549   .d 63 to 925 29 to 893       865/896
(96 %)
15 diff
(98.4 %id)
AV721943 hypothalamus .d 67 to 795 1 to 721       721/722
(99 %)
18 diff
(97.6 %id)
BE870589 adenocarcinoma, colon .d 67 to 838 1 to 771       771/775
(99 %)
21 diff
(97.3 %id)
EB386646 eye, optic nerve .d 67 to 810 1 to 744       744/744
(100 %)
0 diff
(100 %id)
CX752033 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .d 68 to 791 1 to 724     Submitted on the opposite strand 724/724
(100 %)
2 diff
(99.8 %id)
CR624344 Neuroblastoma Cot 25-normalized .d 69 to 1307 1 to 1239       1239/1239
(100 %)
0 diff
(100 %id)
BX343389 Neuroblastoma Cot 25-normalized .d 69 to 877 1 to 808       808/989
(81 %)
2 diff
(99.8 %id)
BI667766 brain, hypothalamus .d 69 to 880 1 to 813       813/870
(93 %)
16 diff
(98.2 %id)
BQ892298 sympathetic trunk .d 70 to 731 1 to 663       663/969
(68 %)
7 diff
(99.3 %id)
BG028544 Bone, osteosarcoma, cell line .d 71 to 730 1 to 648       648/861
(75 %)
16 diff
(98.2 %id)
BI559972 testis .d 71 to 864 1 to 794       794/794
(100 %)
5 diff
(99.4 %id)
TI_44348624   .d 72 to 864 124 to 916       793/916
(86 %)
10 diff
(99.0 %id)
CB266973 adipose .d 73 to 643 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
DB495999.
matches multiple genes
hypothalamus .d 74 to 553 1 to 480     also hits gene FAM89A 480/480
(100 %)
1 diff
(99.8 %id)
DB499960.
matches multiple genes
hypothalamus .d 74 to 564 1 to 491     also hits gene FAM89A 491/491
(100 %)
1 diff
(99.8 %id)
DB499961.
matches multiple genes
hypothalamus .d 74 to 566 1 to 493     also hits gene FAM89A 493/493
(100 %)
7 diff
(98.6 %id)
TI_44344457   .d 74 to 880 88 to 895       808/952
(84 %)
23 diff
(97.6 %id)
BF035913 adenocarcinoma, ovary .d 76 to 802 1 to 731       731/1092
(66 %)
30 diff
(97.3 %id)
AA092585   .d 77 to 351 1 to 274       274/310
(88 %)
2 diff
(99.4 %id)
AA092587   .d 77 to 320 1 to 244       244/246
(99 %)
5 diff
(98.0 %id)
BE790080 large cell carcinoma, lung .d 80 to 691 1 to 624       624/641
(97 %)
34 diff
(94.7 %id)
BU521276 leiomyosarcoma, uterus .d 82 to 420 1 to 339       339/339
(100 %)
0 diff
(100 %id)
BF949224 nervous_normal .d 89 to 497 19 to 425       407/425
(95 %)
7 diff
(98.4 %id)
T71383 liver and spleen .d 91 to 429 8 to 352       345/353
(97 %)
13 diff
(96.4 %id)
BM091026 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .d 92 to 630 1 to 539       539/539
(100 %)
3 diff
(99.5 %id)
CK825619 Pancreas, Purified pancreatic islet .d 93 to 679 1 to 587     Submitted on the opposite strand 587/587
(100 %)
0 diff
(100 %id)
CR744700 germinal center B cell .d 102 to 845 1 to 745       745/745
(100 %)
1 diff
(99.9 %id)
AA278188 germinal center B cell .d 102 to 301 1 to 200       200/200
(100 %)
1 diff
(99.5 %id)
AA278796.
matches multiple genes
germinal center B cell .d 103 to 536 1 to 434     also hits gene STAM 434/434
(100 %)
0 diff
(100 %id)
BF977672 melanotic melanoma, high MDR, skin .d 109 to 778 1 to 684       684/685
(99 %)
43 diff
(93.8 %id)
AW966472   .d 118 to 662 5 to 556       552/664
(83 %)
18 diff
(97.3 %id)
AA384473 thyroid gland .d 119 to 460 7 to 348       342/348
(98 %)
6 diff
(98.3 %id)
H97072 melanocyte .d 122 to 472 1 to 364       364/374
(97 %)
14 diff
(96.3 %id)
CB154732 brain .d 162 to 544 1 to 383       383/383
(100 %)
1 diff
(99.8 %id)
N43893.
matches multiple genes
melanocyte .d 175 to 366 1 to 192     also hits gene KLF9 192/192
(100 %)
0 diff
(100 %id)
CD513289 brain, Pituitary .d 232 to 869 16 to 665       650/919
(70 %)
23 diff
(97.5 %id)
CN310350 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 236 to 960 13 to 738       726/738
(98 %)
8 diff
(99.0 %id)
EL953938 eyeball .d 259 to 692 1 to 419       419/419
(100 %)
13 diff
(96.9 %id)
AA358118 lung .d 268 to 567 1 to 301       301/301
(100 %)
1 diff
(99.7 %id)
BG697533 skin .d 295 to 1103 1 to 812       812/814
(99 %)
12 diff
(98.6 %id)
BM754080 stomach .d 302 to 763 1 to 462       462/462
(100 %)
1 diff
(99.8 %id)
BF820186 kidney_tumor .d 311 to 722 53 to 464       412/479
(86 %)
13 diff
(97.3 %id)
TI_1948090599   .d 321 to 872 678 to 126   fully sequenced,   553/678
(81 %)
3 diff
(99.6 %id)
AL566178 brain, fetal brain .d 352 to 1302 953 to 1       887/953
(93 %)
38 diff
(96.1 %id)
AA056671 uterus .d 387 to 545 1 to 159       159/159
(100 %)
0 diff
(100 %id)
FN070306 breast carcinoma .d 407 to 463 57 to 1     Submitted on the opposite strand 57/57
(100 %)
0 diff
(100 %id)
TI_1948090521   .d 475 to 872 524 to 127   fully sequenced,   398/524
(75 %)
0 diff
(100 %id)
TI_227712671   .d 487 to 1328 913 to 77   AAA   837/1020
(82 %)
18 diff
(98.3 %id)
T24653   .d 497 to 700 1 to 203       203/203
(100 %)
2 diff
(99.1 %id)
W52509 Pancreas, pancreatic islet .d 506 to 948 1 to 446   fully sequenced,   446/446
(100 %)
6 diff
(98.7 %id)
BI871531 adenocarcinoma, cell line, Liver .d 543 to 1336 1 to 792       792/809
(97 %)
7 diff
(99.2 %id)
TI_57231162   .d 543 to 1336 83 to 874       792/809
(97 %)
7 diff
(99.2 %id)
TI_1948090698   .d 562 to 872 431 to 121   fully sequenced,   311/431
(72 %)
0 diff
(100 %id)
TI_1948090784   .d 567 to 872 419 to 111   fully sequenced,   309/419
(73 %)
5 diff
(98.9 %id)
BM716499 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 588 to 1309 1 to 722   fully sequenced,   722/722
(100 %)
0 diff
(100 %id)
TI_151776786   .d 588 to 1272 72 to 763       692/775
(89 %)
33 diff
(95.8 %id)
BQ000291 Fibrosarcoma .d 591 to 1328 752 to 16   AAA   737/737
(100 %)
3 diff
(99.6 %id)
BQ575141 Chondrosarcoma Grade II, Left Pelvis .d 591 to 1328 756 to 19   AAA   738/738
(100 %)
0 diff
(100 %id)
CD367179 Alveolar Macrophage, lung .d 594 to 1328 749 to 16   AAA   734/734
(100 %)
2 diff
(99.8 %id)
EL947325 eyeball .d 598 to 962 1 to 366       366/366
(100 %)
8 diff
(97.9 %id)
AL122047 testis .d 630 to 1328 1 to 699   available from DKFZ, AAA   699/699
(100 %)
0 diff
(100 %id)
BU738554 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 700 to 1328 644 to 16   fully sequenced, AAA   629/629
(100 %)
0 diff
(100 %id)
BQ268692 Pancreas, Purified pancreatic islet .d 706 to 1327 622 to 1       622/622
(100 %)
0 diff
(100 %id)
EL952713 eyeball .d 709 to 1261 1 to 553       553/553
(100 %)
4 diff
(99.3 %id)
BU600837 mixed (pool of 40 RNAs) .d 725 to 1334 1 to 610   AAA   610/610
(100 %)
7 diff
(98.9 %id)
TI_149307690   .d 725 to 1328 696 to 92   AAA   605/950
(63 %)
23 diff
(97.6 %id)
AA730518 Ewing's sarcoma .d 732 to 988 1 to 256       256/256
(100 %)
6 diff
(97.7 %id)
AW975644   .d 734 to 1292 99 to 657       559/657
(85 %)
6 diff
(99.1 %id)
AA113979   .d 734 to 1328 588 to 1       588/622
(94 %)
10 diff
(98.4 %id)
BM091331 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .d 754 to 1333 580 to 1       580/580
(100 %)
5 diff
(99.2 %id)
BG413379 Kidney .d 770 to 1328 559 to 1       559/560
(99 %)
0 diff
(100 %id)
CK430891 eye, lacrimal gland .d 786 to 1322 1 to 537       537/537
(100 %)
0 diff
(100 %id)
BY996951   .d 787 to 1328 591 to 50   AAA Submitted on the opposite strand 542/542
(100 %)
0 diff
(100 %id)
FN079594 breast carcinoma .d 791 to 860 1 to 70       70/70
(100 %)
0 diff
(100 %id)
BG260290 bladder, transitional cell papilloma, cell line .d 811 to 1328 60 to 577   AAA   518/577
(89 %)
7 diff
(98.8 %id)
TI_153989702   .d 816 to 1328 604 to 92   AAA   513/514
(99 %)
2 diff
(99.7 %id)
AA228876   .d 817 to 1229 1 to 413       413/413
(100 %)
4 diff
(99.1 %id)
AI700934 Kidney .d 825 to 1268 444 to 1       444/444
(100 %)
3 diff
(99.4 %id)
AI655403 pooled germ cell tumors .d 830 to 1334 505 to 1       505/505
(100 %)
0 diff
(100 %id)
AI240675 liver and spleen .d 836 to 1331 493 to 5       489/662
(73 %)
7 diff
(99.0 %id)
BE048541 Kidney .d 849 to 1331 487 to 5       483/487
(99 %)
0 diff
(100 %id)
AI310227 2 pooled tumors (clear cell type), Kidney .d 859 to 1333 485 to 11   AAA   475/475
(100 %)
0 diff
(100 %id)
AI284242 Kidney .d 861 to 1328 468 to 1       468/468
(100 %)
0 diff
(100 %id)
N35130 melanocyte .d 864 to 1328 466 to 1       466/468
(99 %)
1 diff
(99.8 %id)
AI653805 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 873 to 1328 456 to 1       456/456
(100 %)
0 diff
(100 %id)
R22210 placenta .d 876 to 1323 462 to 11       452/484
(93 %)
0 diff
(100 %id)
AW024417 Kidney .d 876 to 1335 465 to 5       461/467
(98 %)
0 diff
(100 %id)
BM979430 lung, Primary Lung Epithelial Cells .d 876 to 1328 468 to 16   AAA   453/455
(99 %)
3 diff
(99.4 %id)
H97904 melanocyte .d 878 to 1328 453 to 1       453/453
(100 %)
3 diff
(99.4 %id)
AI347399 colon, colon tumor, RER+ .d 878 to 1325 447 to 1       447/447
(100 %)
0 diff
(100 %id)
AA810828 germinal center B cell .d 881 to 1335 455 to 3       453/455
(99 %)
0 diff
(100 %id)
BE220616 carcinoid, lung .d 884 to 1327 444 to 1       444/444
(100 %)
3 diff
(99.4 %id)
AW439944 2 pooled tumors (clear cell type), Kidney .d 888 to 1329 442 to 1       442/442
(100 %)
5 diff
(98.9 %id)
AI394577 B-cell, chronic lymphotic leukemia .d 889 to 1332 444 to 1       444/444
(100 %)
3 diff
(99.4 %id)
BX343388 Neuroblastoma Cot 25-normalized .d 891 to 1307 417 to 1       417/806
(51 %)
9 diff
(98.9 %id)
H97992 melanocyte .d 897 to 1328 435 to 1       435/435
(100 %)
5 diff
(98.9 %id)
AW469282 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 899 to 1333 435 to 1       435/435
(100 %)
1 diff
(99.8 %id)
AW189861 adenocarcinoma, Pancreas .d 902 to 1331 442 to 12       431/442
(97 %)
0 diff
(100 %id)
BF737922 bladder_tumor .d 904 to 1172 17 to 283       267/283
(94 %)
6 diff
(97.9 %id)
BU166944 melanotic melanoma, skin .d 905 to 1329 1 to 425       425/973
(43 %)
1 diff
(99.9 %id)
W84508 heart .d 907 to 1054 1 to 148   fully sequenced,   148/148
(100 %)
0 diff
(100 %id)
W60066 Pancreas, pancreatic islet .d 918 to 1334 421 to 1   fully sequenced,   421/421
(100 %)
6 diff
(98.6 %id)
AA678091 liver and spleen .d 927 to 1325 398 to 1       398/398
(100 %)
2 diff
(99.5 %id)
AA278354 germinal center B cell .d 927 to 1328 402 to 1       402/402
(100 %)
0 diff
(100 %id)
AI280529 ovary, tumor, 5 pooled (see description) .d 949 to 1331 383 to 1       383/383
(100 %)
0 diff
(100 %id)
BU733753 eye, Retina Foveal and Macular .d 949 to 1333 403 to 19   AAA   385/385
(100 %)
1 diff
(99.8 %id)
AI597720 Prostate .d 951 to 1329 379 to 1       379/379
(100 %)
1 diff
(99.8 %id)
AI335187 2 pooled tumors (clear cell type), Kidney .d 956 to 1333 388 to 11   AAA   378/378
(100 %)
2 diff
(99.5 %id)
AW205822   .d 957 to 1328 389 to 18   AAA   372/372
(100 %)
0 diff
(100 %id)
AI355809 colon, moderately-differentiated adenocarcinoma .d 958 to 1328 371 to 1       371/371
(100 %)
1 diff
(99.8 %id)
AI536657 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .d 958 to 1329 372 to 1       372/413
(90 %)
7 diff
(98.4 %id)
TI_159715223   .d 989 to 1328 431 to 92   AAA   340/1023
(33 %)
0 diff
(100 %id)
CB306730 Human Lung Epithelial cells, lung .d 990 to 1328 354 to 16   AAA   339/339
(100 %)
0 diff
(100 %id)
AA002201 liver and spleen .d 1010 to 1333 326 to 1       326/326
(100 %)
2 diff
(99.4 %id)
W84520 heart .d 1024 to 1328 305 to 1   fully sequenced,   305/305
(100 %)
0 diff
(100 %id)
AW664461 2 pooled high-grade transitional celltumors, genitourinary tract .d 1025 to 1335 313 to 3       311/313
(99 %)
0 diff
(100 %id)
AI991350 Kidney .d 1044 to 1335 293 to 2       292/293
(99 %)
0 diff
(100 %id)
CB044664 colon, juvenile granulosa tumor .d 1048 to 1328 297 to 17   AAA   281/281
(100 %)
6 diff
(97.9 %id)
AA460848   .d 1058 to 1473 421 to 6       416/421
(98 %)
0 diff
(100 %id)
BU729600 eye, Retina Foveal and Macular .d 1073 to 1333 279 to 19   AAA   261/261
(100 %)
0 diff
(100 %id)
AA056549 uterus .d 1093 to 1325 236 to 1       236/236
(100 %)
4 diff
(98.4 %id)
AA765138 germinal center B cell .d 1098 to 1335 240 to 3       238/240
(99 %)
0 diff
(100 %id)
AA449423   .d 1103 to 1335 250 to 18       233/250
(93 %)
0 diff
(100 %id)
R94763 liver and spleen .d 1105 to 1335 233 to 3       231/233
(99 %)
0 diff
(100 %id)
AI373791 Kidney .d 1119 to 1331 216 to 4       213/216
(98 %)
0 diff
(100 %id)
FN098425 breast carcinoma .d 1132 to 1234 1 to 99       99/99
(100 %)
4 diff
(96.0 %id)
AI561273 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 1183 to 1328 157 to 12   AAA   146/146
(100 %)
0 diff
(100 %id)
FN133406 breast carcinoma .d 1188 to 1305 1 to 119       119/119
(100 %)
1 diff
(99.2 %id)
AA278601.
matches multiple genes
germinal center B cell .d 1197 to 1297 101 to 1     also hits gene CEP350 101/101
(100 %)
0 diff
(100 %id)
FN127338 breast carcinoma .d 1220 to 1322 1 to 105       105/107
(98 %)
5 diff
(95.4 %id)
BU164965 eye, retinoblastoma .e 1 to 873 1 to 886 D234G V235C G236W S237E D238V ... tiling clone,   886/891
(99 %)
8 diff
(99.2 %id)
BF691496 melanotic melanoma, high MDR, skin .f 1 to 776 7 to 788 C67V L68C L69F C70V E71K ... tiling clone,   788/805
(97 %)
42 diff
(94.8 %id)
BF983349 duodenal adenocarcinoma, cell line, small intestine .f 10 to 567 25 to 580   tiling clone,   556/1113
(49 %)
18 diff
(98.4 %id)
BI908918 leukocyte .g 1 to 840 1 to 843 L5C Q6S Q7R G8E K9G ... tiling clone,   843/852
(98 %)
20 diff
(97.7 %id)
TI_57235171   .g 1 to 840 36 to 878 L5C Q6S Q7R G8E K9G ...     843/887
(95 %)
24 diff
(97.3 %id)
BE893063 melanotic melanoma, skin .h 1 to 701 1 to 693 Q41R V42* tiling clone,   693/940
(73 %)
14 diff
(98.6 %id)
CA397381 eye, RPE/choroid .i 1 to 219 219 to 1   tiling clone, Submitted on the opposite strand 219/219
(100 %)
4 diff
(98.2 %id)
AL536073 brain, fetal brain .i 67 to 982 1 to 915   tiling clone,   915/915
(100 %)
7 diff
(99.3 %id)
BX451547 brain, fetal brain .i 839 to 1630 1 to 793   tiling clone,   793/793
(100 %)
18 diff
(97.8 %id)
CN310351 embryonic stem cells, DMSO-treated H9 cellline .i 968 to 1448 1 to 482       482/482
(100 %)
3 diff
(99.4 %id)
BM453935 melanotic melanoma, skin .i 1066 to 1907 25 to 869 P98A N99Q F100L I101H L102F ... tiling clone,   845/873
(96 %)
14 diff
(98.4 %id)
TI_154188284   .j 1 to 746 123 to 873 exact tiling clone,   751/953
(78 %)
32 diff
(96.7 %id)
BP350642   .k 1 to 582 1 to 582 exact tiling clone,   582/582
(100 %)
0 diff
(100 %id)
AK092987 Spleen .l-u 1 to 2811 2 to 2812 exact tiling clone, available from FLJ,   2812/2812
(100 %)
5 diff
(99.9 %id)
DA943275 Spleen .l-u 1 to 567 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
CR740600   .l-u 106 to 402 11 to 307   tiling clone,   297/312
(95 %)
1 diff
(99.7 %id)
BE158765 head_neck .l-u 190 to 462 1 to 273       273/273
(100 %)
3 diff
(99.0 %id)
AI346356 adenocarcinoma, colon .l-u 442 to 968 527 to 1       527/527
(100 %)
2 diff
(99.7 %id)
AI694236 carcinoid, lung .l-u 493 to 971 479 to 1       479/479
(100 %)
2 diff
(99.6 %id)
AA744488 germinal center B cell .l-u 539 to 968 439 to 10   tiling clone,   430/439
(97 %)
0 diff
(100 %id)
AI028789   .l-u 575 to 966 394 to 3       392/394
(99 %)
0 diff
(100 %id)
AA976697 carcinoid, lung .l-u 642 to 967 327 to 1       327/327
(100 %)
1 diff
(99.7 %id)
EB385422 eye, optic nerve .l-u 851 to 1612 1 to 763   tiling clone,   763/763
(100 %)
2 diff
(99.8 %id)
BI038463 nervous_tumor .l-u 1242 to 1689 486 to 46       441/486
(90 %)
0 diff
(100 %id)
BF994616 placenta_normal .l-u 1396 to 1615 16 to 234       219/240
(91 %)
4 diff
(98.4 %id)
BF994624 placenta_normal .l-u 1406 to 1615 1 to 210       210/216
(97 %)
6 diff
(97.3 %id)
DA118731 cerebellum .l-u 1622 to 2169 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
BG433884 Kidney .l-u 1712 to 2464 1 to 750       750/784
(95 %)
22 diff
(97.2 %id)
BX348509   .l-u 1844 to 2599 1 to 761       761/995
(76 %)
17 diff
(98.3 %id)
DB333344 Spleen .l-u 2270 to 2811 544 to 1       544/544
(100 %)
3 diff
(99.5 %id)
BG776817 lung, mucoepidermoid carcinoma .m 1 to 630 1 to 634 L17S I31H E33G H34T D35* tiling clone,   632/634
(99 %)
19 diff
(97.1 %id)
R98597 liver and spleen .m 164 to 562 1 to 405 K6S N8T F9S I10F L11X ... tiling clone,   405/410
(98 %)
12 diff
(97.1 %id)
R98598 liver and spleen .m 750 to 1012 264 to 1   tiling clone,   264/267
(98 %)
2 diff
(99.3 %id)
BX098444 liver and spleen .n 1 to 763 1 to 762 K6S N8T F9S I10F L11C ... tiling clone,   762/762
(100 %)
1 diff
(99.9 %id)
AV655998 corresponding non cancerous liver tissue Gene ARV1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV707101 adrenal gland Gene ARV1, variant not shown         Suspected internal deletion, this clone was ignored    
AV661562 corresponding non cancerous liver tissue Gene ARV1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BF948217 nervous_normal Gene ARV1, variant not shown         This clone was ignored    
AA018673 eye, retina Gene ARV1, variant not shown         Submitted on the opposite strand    
AA018674 eye, retina Gene ARV1, variant not shown         Submitted on the opposite strand    
BG776829 lung, mucoepidermoid carcinoma Gene ARV1, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
DB065308 testis Gene ARV1, variant not shown       capped This clone was ignored    
DB339642 testis Gene ARV1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C