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Gene ARMC4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
124 supporting clones for gene ARMC4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA184551 amygdala .a 1 to 351 2 to 352   tiling clone, capped   351/351
(100 %)
0 diff
(100 %id)
AK292521 testis .a 44 to 3529 1 to 3486 exact tiling clone,   3486/3486
(100 %)
1 diff
(100.0 %id)
DB081541 testis .a 45 to 596 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
CD688151 normal nasopharynx .a 50 to 662 23 to 635       613/635
(96 %)
8 diff
(98.8 %id)
DB213446 trachea .a 63 to 636 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB217266 trachea .a 63 to 631 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DB225657 trachea .a 63 to 630 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB237974 trachea .a 63 to 653 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA759006   .a 66 to 552 2 to 488   capped   487/487
(100 %)
0 diff
(100 %id)
DB205569 trachea .a 66 to 633 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
CK000961 mixed .b 1 to 740 26 to 758   available from MGC,   741/806
(91 %)
14 diff
(98.3 %id)
BC085611 Chondrosarcoma, myxoid chondrosarcoma GradeII, mixture of 3 cell lines, enriched for 4-5 Kb mRNA .b 1 to 3574 4 to 3573 C784F K870R D871C A872W E874N ... tiling clone, available from MGC, AAA   3573/3573
(100 %)
4 diff
(99.9 %id)
AK001679   .b 1 to 3568 2 to 3569 L351R E352W K353R N354R Q355T ... available from FLJ,   3569/3569
(100 %)
7 diff
(99.9 %id)
BP872991 embryonal kidney .b 1 to 580 2 to 581       581/581
(100 %)
0 diff
(100 %id)
NM_018076.2   .b 1 to 3571 2 to 3572 exact RefSeq,   3572/3572
(100 %)
0 diff
(100 %id)
AU132976   .b 1 to 741 2 to 744   capped   743/744
(99 %)
4 diff
(99.5 %id)
TI_2194697182   .b 69 to 407 247 to 585   AAA Submitted on the opposite strand 339/1250
(27 %)
8 diff
(99.4 %id)
BC140846 Brain, cerebellum, PCR rescued clones .b 70 to 3294 1 to 3225 exact     3225/3225
(100 %)
1 diff
(100.0 %id)
AU124293   .b 412 to 1289 2 to 889   capped   888/912
(97 %)
20 diff
(97.9 %id)
BU528460 epidermoid carcinoma, cell line, lung .b 683 to 1605 1 to 920       920/925
(99 %)
13 diff
(98.6 %id)
AL136859 testis .b 1612 to 3569 1 to 1956   tiling clone, available from DKFZ, AAA   1956/1956
(100 %)
1 diff
(100.0 %id)
BG827715 muscle, rhabdomyosarcoma .b 2593 to 3311 1 to 754       663/754
(87 %)
30 diff
(96.1 %id)
TI_159697377   .b 2620 to 3480 939 to 91   AAA   830/972
(85 %)
26 diff
(97.4 %id)
BG183534   .b 2697 to 3474 1 to 777       777/779
(99 %)
22 diff
(97.2 %id)
BG196505   .b 2699 to 3478 1 to 778       778/781
(99 %)
7 diff
(99.2 %id)
BG184690   .b 2744 to 3552 824 to 16     Submitted on the opposite strand 809/827
(97 %)
14 diff
(98.4 %id)
TI_159714613   .b 2798 to 3569 845 to 84   AAA   762/968
(78 %)
11 diff
(98.9 %id)
TI_159714587   .b 2868 to 3569 784 to 84   AAA   701/1031
(67 %)
1 diff
(100.0 %id)
CN478596 Human Lung Epithelial cells, lung .b 2869 to 3569 718 to 19   AAA   700/700
(100 %)
1 diff
(99.9 %id)
TI_149299176   .b 2892 to 3569 763 to 89   AAA   675/784
(86 %)
17 diff
(97.9 %id)
BG183535   .b 2899 to 3552 699 to 47     Submitted on the opposite strand 653/953
(68 %)
8 diff
(99.2 %id)
CN478612 Human Lung Epithelial cells, lung .b 2918 to 3569 667 to 19   AAA   649/649
(100 %)
2 diff
(99.7 %id)
BQ774953 Bone, Human Chondrosarcoma Cell Line .b 2918 to 3573 672 to 19   AAA   654/654
(100 %)
2 diff
(99.7 %id)
TI_149284431   .b 2922 to 3569 727 to 80   AAA   648/1013
(63 %)
6 diff
(99.5 %id)
BM984465 lung, Primary Lung Epithelial Cells .b 2968 to 3569 620 to 19   AAA   602/602
(100 %)
3 diff
(99.6 %id)
BE501375 pooled germ cell tumors .b 2983 to 3479 499 to 3       497/499
(99 %)
0 diff
(100 %id)
AU154400   .b 3000 to 3568 562 to 1       562/571
(98 %)
17 diff
(97.1 %id)
DB524524 testis .b 3004 to 3486 1 to 483     Submitted on the opposite strand 483/483
(100 %)
1 diff
(99.8 %id)
BM975631 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 3008 to 3569 579 to 19   AAA   561/561
(100 %)
3 diff
(99.5 %id)
AI016769   .b 3040 to 3428 389 to 1       389/389
(100 %)
1 diff
(99.8 %id)
AA861811   .b 3053 to 3571 518 to 2       517/518
(99 %)
0 diff
(100 %id)
DB508187 testis .b 3060 to 3480 1 to 421     Submitted on the opposite strand 421/421
(100 %)
0 diff
(100 %id)
BG187578   .b 3108 to 3571 1 to 466   AAA   466/466
(100 %)
10 diff
(97.9 %id)
BG190892   .b 3108 to 3552 1 to 443       443/464
(95 %)
6 diff
(98.8 %id)
BG204712   .b 3108 to 3569 1 to 457   AAA   457/458
(99 %)
12 diff
(97.4 %id)
BG212612   .b 3108 to 3552 1 to 445       445/466
(95 %)
3 diff
(99.4 %id)
BG212613   .b 3108 to 3552 1 to 441       441/462
(95 %)
6 diff
(98.8 %id)
BG210626   .b 3110 to 3552 1 to 443       443/443
(100 %)
6 diff
(98.7 %id)
BG192404   .b 3111 to 3553 1 to 442       442/462
(95 %)
11 diff
(97.7 %id)
BG198016   .b 3111 to 3552 1 to 441       441/462
(95 %)
5 diff
(99.0 %id)
BG212611   .b 3111 to 3552 1 to 441       441/462
(95 %)
7 diff
(98.5 %id)
BG217412   .b 3111 to 3553 1 to 442       442/462
(95 %)
6 diff
(98.8 %id)
BG218965   .b 3111 to 3552 1 to 441       441/468
(94 %)
23 diff
(95.1 %id)
BG220437   .b 3111 to 3552 1 to 441       441/442
(99 %)
8 diff
(98.2 %id)
BG192403   .b 3112 to 3552 1 to 440       440/461
(95 %)
6 diff
(98.7 %id)
BG202137   .b 3112 to 3359 1 to 254       254/254
(100 %)
9 diff
(96.5 %id)
BG204711   .b 3112 to 3554 1 to 442       442/461
(95 %)
5 diff
(99.0 %id)
BG185617   .b 3114 to 3552 51 to 489       439/510
(86 %)
6 diff
(98.9 %id)
BG201612   .b 3115 to 3569 19 to 472   AAA   454/474
(95 %)
6 diff
(98.8 %id)
BG204217   .b 3115 to 3573 50 to 502   AAA   453/504
(89 %)
6 diff
(98.9 %id)
BG207923   .b 3115 to 3479 8 to 374       367/375
(97 %)
8 diff
(97.9 %id)
BG213654   .b 3116 to 3533 47 to 464       418/504
(82 %)
6 diff
(98.9 %id)
BG185098   .b 3117 to 3552 10 to 445       436/466
(93 %)
6 diff
(98.8 %id)
BG207357   .b 3117 to 3569 14 to 467   AAA   454/467
(97 %)
6 diff
(98.8 %id)
BG207358   .b 3117 to 3569 12 to 464   AAA   453/464
(97 %)
6 diff
(98.8 %id)
BG218966   .b 3117 to 3571 15 to 471       457/848
(53 %)
15 diff
(98.3 %id)
BG208949   .b 3120 to 3553 1 to 434       434/454
(95 %)
3 diff
(99.4 %id)
BG211971   .b 3122 to 3571 14 to 460   AAA   447/460
(97 %)
21 diff
(95.5 %id)
BG219442   .b 3122 to 3552 1 to 431       431/452
(95 %)
6 diff
(98.7 %id)
BG185618   .b 3124 to 3573 22 to 472   AAA   451/472
(95 %)
7 diff
(98.6 %id)
BG192405   .b 3124 to 3573 25 to 474   AAA   450/474
(94 %)
6 diff
(98.8 %id)
BG205255   .b 3127 to 3569 19 to 460   AAA   442/460
(96 %)
6 diff
(98.7 %id)
BX282743 testis .b 3128 to 3569 467 to 28   AAA Submitted on the opposite strand 440/440
(100 %)
1 diff
(99.8 %id)
BG196506   .b 3134 to 3569 30 to 463   AAA   434/463
(93 %)
6 diff
(98.8 %id)
AW991221   .b 3140 to 3568 1 to 429   tiling clone,   429/429
(100 %)
0 diff
(100 %id)
AI696226 pooled germ cell tumors .b 3158 to 3479 325 to 3       323/325
(99 %)
0 diff
(100 %id)
AI336278 lung .b 3223 to 3569 380 to 36   AAA   345/347
(99 %)
21 diff
(94.0 %id)
AI338768 lung .b 3223 to 3569 380 to 36   AAA   345/347
(99 %)
19 diff
(94.6 %id)
BX279725 pooled germ cell tumors .c 1 to 2121 1 to 511   tiling clone, Suspected internal deletion 509/511
(99 %)
6 diff
(98.9 %id)
TI_149273317   .c 2111 to 2818 817 to 115   tiling clone, AAA   703/844
(83 %)
10 diff
(98.9 %id)
BU675734 lung, Primary Lung Epithelial Cells .c 2263 to 2818 573 to 19   tiling clone, AAA   555/555
(100 %)
2 diff
(99.7 %id)
AK302627 testis .d 1 to 2835 6 to 2840 E354G D603G tiling clone,   2840/2840
(100 %)
2 diff
(100.0 %id)
AK302419 testis .e 1 to 3004 1 to 3004 R358Q R479C tiling clone,   3004/3004
(100 %)
5 diff
(99.9 %id)
DC400077 testis .e 1 to 560 1 to 561   tiling clone,   561/561
(100 %)
2 diff
(99.7 %id)
DC401499 testis .e 333 to 883 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DB054226 testis .e 338 to 909 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB079385 testis .e 366 to 942 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB459039 testis .e 374 to 861 1 to 484       484/484
(100 %)
3 diff
(99.4 %id)
DC403990 testis .e 380 to 910 1 to 532       532/532
(100 %)
3 diff
(99.5 %id)
DB443290 testis .e 401 to 856 1 to 455       455/455
(100 %)
1 diff
(99.8 %id)
DC414800 trachea .e 421 to 966 1 to 546       546/546
(100 %)
4 diff
(99.3 %id)
BE882569 leiomyosarcoma, uterus .e 560 to 1223 1 to 668       668/721
(92 %)
9 diff
(98.8 %id)
AL079411.
matches multiple genes
testis .e 730 to 1047 1 to 318     also hits gene KIAA0195 318/320
(99 %)
5 diff
(98.5 %id)
BP371481 testis .e 1413 to 1945 1 to 533   tiling clone,   533/581
(91 %)
8 diff
(98.7 %id)
AK302048 testis .f 1 to 2521 1 to 2519 exact tiling clone,   2519/2519
(100 %)
4 diff
(99.9 %id)
DC397005 testis .f 1 to 581 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DA791108 brain .g 1 to 577 2 to 578   tiling clone, capped   577/577
(100 %)
2 diff
(99.7 %id)
AK001238   .g 440 to 2176 1 to 1737   tiling clone, available from FLJ,   1737/1737
(100 %)
6 diff
(99.7 %id)
BP370644 testis .h 1 to 1085 1 to 573 I3L V4L D5T G8A L9Y ... tiling clone, Suspected internal deletion 573/573
(100 %)
7 diff
(98.8 %id)
AK301708 testis .i 1 to 1082 1 to 1081 F50L N193I L194C E196K T197P ... tiling clone,   1081/1081
(100 %)
2 diff
(99.9 %id)
DC394657 testis .i 1 to 554 1 to 554   tiling clone,   554/554
(100 %)
1 diff
(99.9 %id)
DC395409 testis .i 8 to 562 1 to 555       555/555
(100 %)
2 diff
(99.7 %id)
DC398994 testis .i 8 to 574 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
BI562628 testis .i 14 to 747 1 to 736       735/736
(99 %)
24 diff
(96.8 %id)
TI_44351044   .i 14 to 747 124 to 859       735/859
(85 %)
28 diff
(96.8 %id)
TI_44350463   .i 40 to 598 116 to 680       565/680
(83 %)
12 diff
(98.3 %id)
BG722590 testis .i 42 to 806 1 to 756       756/757
(99 %)
24 diff
(96.9 %id)
BI561694 testis .i 42 to 598 1 to 563       563/563
(100 %)
10 diff
(98.3 %id)
DC397348 testis .i 46 to 598 1 to 553       553/553
(100 %)
0 diff
(100 %id)
BP371279 testis .i 46 to 609 1 to 564       564/564
(100 %)
2 diff
(99.7 %id)
DC395854 testis .i 47 to 645 1 to 599   tiling clone,   599/599
(100 %)
0 diff
(100 %id)
DC396797 testis .i 47 to 621 1 to 575       575/575
(100 %)
2 diff
(99.7 %id)
DC396909 testis .i 47 to 629 1 to 583       583/584
(99 %)
1 diff
(99.9 %id)
DC397014 testis .i 47 to 615 1 to 569       569/569
(100 %)
3 diff
(99.5 %id)
DC397392 testis .i 47 to 601 1 to 556       556/556
(100 %)
1 diff
(99.9 %id)
DC398050 testis .i 47 to 621 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
DC399711 testis .i 47 to 573 1 to 528       528/528
(100 %)
3 diff
(99.5 %id)
DC399759 testis .i 47 to 583 1 to 537       537/537
(100 %)
0 diff
(100 %id)
DC400427 testis .i 47 to 566 1 to 520       520/520
(100 %)
1 diff
(99.9 %id)
BX279799 leiomyosarcoma, uterus .j 1 to 501 1 to 501 L30P     501/501
(100 %)
1 diff
(99.9 %id)
BM457947 leiomyosarcoma, uterus .j 1 to 644 1 to 642 L30P tiling clone, AAA   642/642
(100 %)
2 diff
(99.7 %id)
DC403054 testis .k 1 to 546 1 to 547 exact tiling clone,   547/556
(98 %)
1 diff
(99.9 %id)
DB097494 testis .l 1 to 430 153 to 582 exact tiling clone, capped   430/581
(74 %)
6 diff
(99.0 %id)
BU567794 testis .m 1 to 628 1 to 626 exact tiling clone,   626/856
(73 %)
14 diff
(98.4 %id)
DC396143 testis Gene ARMC4, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C