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Gene ARL1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
558 supporting clones for gene ARL1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BI667852 brain, hypothalamus .a 1 to 781 1 to 778 R2G G19D G21D Q22S D25T ... tiling clone,   778/778
(100 %)
10 diff
(98.8 %id)
TI_44343968   .a 6 to 781 87 to 859       773/859
(89 %)
10 diff
(98.9 %id)
CA488707   .b 1 to 879 1 to 882 G165X L166P D167* tiling clone,   882/883
(99 %)
10 diff
(98.9 %id)
DB231064 trachea .c 1 to 553 2 to 555   tiling clone, capped   554/554
(100 %)
2 diff
(99.7 %id)
DC343685 thalamus .c 585 to 1119 1 to 535   tiling clone,   535/535
(100 %)
0 diff
(100 %id)
CD686919 normal nasopharynx .c 604 to 1244 26 to 665       640/665
(96 %)
6 diff
(99.1 %id)
CD687123 normal nasopharynx .c 604 to 1131 16 to 542       527/542
(97 %)
6 diff
(98.9 %id)
DA021982   .c 610 to 1193 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA178825 amygdala .c 610 to 1108 2 to 500   capped   499/499
(100 %)
4 diff
(99.2 %id)
NM_001177.3   .c 611 to 3809 1 to 3199 exact RefSeq,   3199/3199
(100 %)
0 diff
(100 %id)
DA309175 hippocampus .c 612 to 1179 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB159047 thymus .c 612 to 1164 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BX537387 human retina .c 613 to 3800 1 to 3189 exact tiling clone, available from DKFZ, AAA   3189/3189
(100 %)
4 diff
(99.9 %id)
AU077288   .c 613 to 809 1 to 197       197/197
(100 %)
1 diff
(99.5 %id)
AU100271   .c 613 to 855 1 to 242       242/300
(80 %)
5 diff
(98.4 %id)
AU108024   .c 613 to 662 1 to 50       50/50
(100 %)
1 diff
(98.0 %id)
DA004381   .c 614 to 1182 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA209828 brain .c 614 to 1140 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DA361656 subthalamic nucleus .c 614 to 1178 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA367008 subthalamic nucleus .c 614 to 1183 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA388278 thalamus .c 614 to 1213 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
DA472250   .c 614 to 1050 2 to 438   capped   437/437
(100 %)
2 diff
(99.6 %id)
AL701988 human skeletal muscle .c 614 to 1123 1 to 510       510/510
(100 %)
0 diff
(100 %id)
DA599628   .c 614 to 1172 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA723727   .c 614 to 1153 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DB088106 testis .c 614 to 1161 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB141444 thymus .c 614 to 1152 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DB216937 trachea .c 614 to 1161 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DB142399 thymus .c 615 to 1149 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DA121819 cerebellum .c 618 to 1177 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA447808 tongue, tumor tissue .c 618 to 1171 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB176267 kidney, tumor tissue .c 618 to 1179 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA183314 amygdala .c 620 to 1021 2 to 403   capped   402/402
(100 %)
2 diff
(99.6 %id)
DA411876 thalamus .c 620 to 1168 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA438609 tongue, tumor tissue .c 620 to 1197 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BI549878 brain, hippocampus .c 620 to 1324 6 to 709 F124L A125Q N126I K127N Q128R ...     704/710
(99 %)
12 diff
(98.4 %id)
TI_44171437   .c 620 to 1324 90 to 793 F124L A125Q N126I K127N Q128R ...     704/794
(88 %)
12 diff
(98.5 %id)
DB019871 testis .c 620 to 1157 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DB079696 testis .c 620 to 1156 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DB079825 testis .c 620 to 1174 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA606039   .c 621 to 1168 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DB155860 thymus .c 621 to 1212 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
DB157513 thymus .c 621 to 1210 2 to 593   capped   592/595
(99 %)
4 diff
(99.4 %id)
BX405524 fetal liver, Liver .c 625 to 1598 1 to 974 D96X K127X K149X D150X K152X ...     974/974
(100 %)
13 diff
(98.7 %id)
DA119531 cerebellum .c 629 to 1108 2 to 483   capped   482/482
(100 %)
3 diff
(99.4 %id)
BC007000 Bladder, carcinoma .c 630 to 1613 1 to 984 exact available from MGC, AAA   984/984
(100 %)
2 diff
(99.8 %id)
BU945362 mixed (pool of 40 RNAs) .c 630 to 1454 1 to 833 G165X L166P D167*     833/836
(99 %)
20 diff
(97.7 %id)
DA400121 thalamus .c 631 to 1201 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA408245 thalamus .c 631 to 1170 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA991705 synovial membrane tissue from rheumatioidarthritis .c 631 to 1169 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
CR595963 Placenta Cot 25-normalized .c 632 to 1589 1 to 957 L173Q V174L E175K T176H L177*     957/957
(100 %)
2 diff
(99.8 %id)
BP249848 hippocampus .c 633 to 1213 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
L28997   .c 633 to 1623 21 to 1008 exact     988/1008
(98 %)
7 diff
(99.4 %id)
DB136130 thymus .c 634 to 1108 2 to 476   capped   475/475
(100 %)
0 diff
(100 %id)
CN373299 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 635 to 1330 1 to 696 exact     696/696
(100 %)
5 diff
(99.3 %id)
BG426889 Kidney .c 635 to 1085 1 to 449       449/449
(100 %)
9 diff
(98.0 %id)
BG779958 adenocarcinoma, Prostate .c 635 to 1451 1 to 819 K118N A119S I120H L121F V122S ...     819/822
(99 %)
8 diff
(99.1 %id)
BG707712 brain, hypothalamus .c 637 to 1272 1 to 633       633/634
(99 %)
9 diff
(98.6 %id)
AL560086 B cells (Ramos cell line), B cells from Burkitt lymphoma .c 638 to 1677 1 to 1032 exact     1032/1047
(98 %)
12 diff
(98.9 %id)
DA024209   .c 639 to 1195 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
CD700432 normal nasopharynx .c 639 to 1024 36 to 421       386/421
(91 %)
7 diff
(98.4 %id)
CR599734 Placenta Cot 25-normalized .c 639 to 2152 1 to 1513 L173Q V174L E175K T176H L177*     1513/1513
(100 %)
2 diff
(99.9 %id)
BX381175 Placenta Cot 25-normalized .c 639 to 1532 1 to 892 E168X fully sequenced,   892/892
(100 %)
3 diff
(99.7 %id)
DA579566   .c 639 to 1189 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BU932738 mixed (pool of 40 RNAs) .c 639 to 1440 1 to 803 G165X L166P D167*     803/803
(100 %)
8 diff
(99.1 %id)
CD689496 normal nasopharynx .c 640 to 1182 17 to 559       543/559
(97 %)
18 diff
(96.8 %id)
BU941891 mixed (pool of 40 RNAs) .c 640 to 1280 1 to 642       642/795
(80 %)
12 diff
(98.5 %id)
AL705821 human skeletal muscle .c 641 to 1340 1 to 700 R16L E17*     700/700
(100 %)
6 diff
(99.2 %id)
BG493440 lung, mucoepidermoid carcinoma .c 641 to 1499 1 to 861 G2C E115R L116A R117E A119S ...     859/901
(95 %)
36 diff
(96.1 %id)
BG564175 Liver .c 641 to 1386 1 to 751 L166F V174A L177I S179K R180Q ...     751/909
(82 %)
16 diff
(98.3 %id)
DA937611 Spleen .c 641 to 1243 2 to 604   capped   603/603
(100 %)
1 diff
(99.9 %id)
CD696472 normal nasopharynx .c 642 to 1235 23 to 617       595/617
(96 %)
7 diff
(98.9 %id)
CD704598 normal nasopharynx .c 642 to 1009 23 to 391       369/391
(94 %)
7 diff
(98.3 %id)
DB474201 hippocampus .c 642 to 1128 1 to 487       487/487
(100 %)
0 diff
(100 %id)
DB479048 hippocampus .c 642 to 1135 1 to 494       494/494
(100 %)
0 diff
(100 %id)
CR608773 Placenta Cot 25-normalized .c 643 to 2154 1 to 1511 L173Q V174L E175K T176H L177*     1511/1511
(100 %)
2 diff
(99.9 %id)
BX442917 B cells (Ramos cell line) .c 644 to 1713 1 to 1073 F9X S10P L21X K30X Q38X ...     1073/1073
(100 %)
43 diff
(96.0 %id)
AL548252 placenta, Placenta Cot 25-normalized .c 644 to 1567 1 to 919 exact fully sequenced,   919/919
(100 %)
6 diff
(99.4 %id)
BX400250   .c 644 to 1621 1 to 975 exact     975/975
(100 %)
9 diff
(99.1 %id)
BF979295 testis .c 644 to 1275 1 to 628       628/628
(100 %)
12 diff
(98.1 %id)
CR596544 HeLa cells Cot 25-normalized .c 645 to 2261 1 to 1616 L173Q V174L E175K T176H L177*     1616/1616
(100 %)
2 diff
(99.9 %id)
AL542658 placenta .c 645 to 1593 1 to 940 exact fully sequenced,   940/940
(100 %)
7 diff
(99.3 %id)
AL578341 placenta .c 645 to 1581 1 to 929 Q38X L121F K127X fully sequenced, AAA   929/929
(100 %)
7 diff
(99.3 %id)
DB495760 hypothalamus .c 645 to 1147 1 to 502       502/502
(100 %)
2 diff
(99.7 %id)
BX394723 Neuroblastoma Cot 25-normalized .c 646 to 1590 951 to 7 N52Y V53C E54R T55D V56G ...     945/953
(99 %)
10 diff
(99.0 %id)
BG387874 embryonal carcinoma, cell line, testis .c 646 to 1280 1 to 629       629/910
(69 %)
15 diff
(98.4 %id)
BP342097 stomach mucosa .c 646 to 1221 1 to 576       576/576
(100 %)
0 diff
(100 %id)
CN373308 embryonic stem cells, cell lines H1, H7, andH9 .c 647 to 1431 1 to 786 exact     786/786
(100 %)
2 diff
(99.8 %id)
DN913773   .c 647 to 1185 1 to 539       539/539
(100 %)
0 diff
(100 %id)
DN913935   .c 647 to 889 1 to 243       243/243
(100 %)
0 diff
(100 %id)
DA390378 thalamus .c 648 to 1200 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BX500066 Liver .c 648 to 1061 1 to 420       420/420
(100 %)
11 diff
(97.4 %id)
BE865766 bladder, carcinoma, cell line .c 649 to 1230 1 to 574       574/837
(68 %)
20 diff
(97.7 %id)
BI761749 pooled colon, kidney, stomach .c 649 to 1491 1 to 855 Q154H L177F S179K R180Q Q181T     855/855
(100 %)
18 diff
(97.9 %id)
CF993972 Human Placenta, placenta .c 649 to 1337 28 to 714 G144A T158R S159R A160H T161Q ...     687/727
(94 %)
16 diff
(97.8 %id)
TI_57149374   .c 649 to 1491 37 to 891 Q154H L177F S179K R180Q Q181T     855/891
(95 %)
25 diff
(97.2 %id)
CB958196 Pooled-Glandular .c 650 to 1387 1 to 742 S179A R180D Q181S     742/851
(87 %)
19 diff
(97.8 %id)
AA385768 thyroid gland .c 651 to 984 1 to 338       338/374
(90 %)
15 diff
(96.0 %id)
N56619 placenta .c 651 to 1126 1 to 479       479/483
(99 %)
10 diff
(98.0 %id)
BX481285   .c 652 to 1268 1 to 620       620/620
(100 %)
5 diff
(99.2 %id)
CR596591 HeLa cells Cot 25-normalized .c 653 to 2146 1 to 1493 L173Q V174L E175K T176H L177*     1493/1493
(100 %)
2 diff
(99.9 %id)
DA993260 synovial membrane tissue from rheumatioidarthritis .c 653 to 1193 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
BP369390 testis .c 653 to 1223 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DA152417 amygdala .c 654 to 1229 2 to 578   capped   577/578
(99 %)
3 diff
(99.5 %id)
DA265194 caudate nucleus .c 654 to 1201 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA714808   .c 654 to 1189 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DB093023 testis .c 654 to 1204 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
CN373302 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 655 to 1326 1 to 672 exact     672/672
(100 %)
1 diff
(99.9 %id)
CN373303 embryonic stem cells, cell lines H1, H7, andH9 .c 655 to 1369 1 to 715 exact     715/715
(100 %)
1 diff
(99.9 %id)
DA479508   .c 655 to 1221 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
AA393920   .c 655 to 1192 1 to 535       535/535
(100 %)
8 diff
(98.6 %id)
CD702826 normal nasopharynx .c 656 to 1102 31 to 476       446/482
(92 %)
12 diff
(97.6 %id)
DA123465 cerebellum .c 657 to 1198 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DA127262 cerebellum .c 657 to 1239 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA139753 alzheimer cortex .c 657 to 1224 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA147208 amygdala .c 657 to 1228 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA209594 brain .c 657 to 1142 2 to 489   capped   488/488
(100 %)
2 diff
(99.6 %id)
DA405656 thalamus .c 657 to 1212 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA477963   .c 657 to 1223 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BG530612 embryonal carcinoma, testis .c 657 to 1413 1 to 772 V42A M130H E131G Q132T A133G ...     772/777
(99 %)
38 diff
(95.2 %id)
BP343118 stomach mucosa .c 657 to 1245 1 to 588       588/588
(100 %)
3 diff
(99.5 %id)
DB098001 testis .c 657 to 1250 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DB258709 uterus .c 657 to 1213 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
CN373300 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 658 to 1077 1 to 420       420/420
(100 %)
0 diff
(100 %id)
BG534291 lung .c 658 to 1324 1 to 670 V92R D93R S94Q C95L D96*     670/670
(100 %)
4 diff
(99.5 %id)
DA395535 thalamus .c 659 to 1248 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
BP243456 Liver .c 659 to 1223 1 to 567       567/567
(100 %)
9 diff
(98.5 %id)
T67643 liver and spleen .c 659 to 984 1 to 331       331/426
(77 %)
13 diff
(97.0 %id)
T79138 liver and spleen .c 659 to 1031 1 to 383       383/388
(98 %)
21 diff
(94.6 %id)
BP316753 pericardium .c 659 to 1240 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DB082368 testis .c 659 to 1229 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
AK311793 placenta .c 660 to 1305 1 to 646 exact     646/646
(100 %)
0 diff
(100 %id)
DA121723 cerebellum .c 660 to 1203 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA172149 amygdala .c 660 to 984 2 to 326   capped   325/333
(97 %)
1 diff
(99.7 %id)
DA365629 subthalamic nucleus .c 660 to 1227 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA412929 thalamus .c 660 to 1218 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA413233 thalamus .c 660 to 1193 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
H60159 liver and spleen .c 660 to 954 1 to 295       295/295
(100 %)
6 diff
(98.0 %id)
DA612962   .c 660 to 1253 2 to 597   capped   596/596
(100 %)
2 diff
(99.7 %id)
DA715394   .c 660 to 1238 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA852583 placenta .c 660 to 1215 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
BP336855 coronary artery .c 660 to 1247 1 to 588       588/588
(100 %)
2 diff
(99.7 %id)
BP336891 coronary artery .c 660 to 1253 1 to 594       594/594
(100 %)
0 diff
(100 %id)
DB081017 testis .c 660 to 1220 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB136414 thymus .c 660 to 1196 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB147191 thymus .c 660 to 1165 2 to 506   capped   505/505
(100 %)
1 diff
(99.9 %id)
DB271909 uterus .c 660 to 1184 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DA146924 amygdala .c 661 to 1245 2 to 589   capped   588/588
(100 %)
5 diff
(99.2 %id)
BX116331 liver and spleen .c 661 to 1483 1 to 823 exact     823/823
(100 %)
0 diff
(100 %id)
DA711162   .c 661 to 1219 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA858303 placenta .c 661 to 1318 2 to 659 exact capped   658/658
(100 %)
0 diff
(100 %id)
DB073832 testis .c 661 to 1210 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB091643 testis .c 661 to 1213 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB093269 testis .c 661 to 1221 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB211464 trachea .c 661 to 1105 2 to 446   capped   445/458
(97 %)
8 diff
(98.3 %id)
DB238760 trachea .c 661 to 1178 2 to 519   capped   518/518
(100 %)
1 diff
(99.9 %id)
DB242949 stomach, tumor tissue .c 661 to 1237 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB243614 stomach, tumor tissue .c 661 to 1219 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
CN373298 embryonic stem cells, DMSO-treated H9 cellline .c 662 to 1342 4 to 695 exact     703/695
(101 %)
57 diff
(91.8 %id)
CN373310 embryonic stem cells, cell lines H1, H7, andH9 .c 662 to 1273 1 to 614       614/614
(100 %)
2 diff
(99.7 %id)
BU194014 melanotic melanoma, skin .c 662 to 1508 6 to 873 G165R L166P D167*     881/876
(100 %)
77 diff
(91.3 %id)
DB072897 testis .c 662 to 1206 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB089496 testis .c 662 to 1204 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB213502 trachea .c 662 to 970 2 to 310   capped   309/309
(100 %)
0 diff
(100 %id)
DA881249   .c 663 to 1225 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB080051 testis .c 663 to 1225 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BG623416 placenta .c 664 to 1382 1 to 721 S159V A160S T161N K162Q G163R ...     721/721
(100 %)
6 diff
(99.2 %id)
BM352169 Pancreas, Purified pancreatic islet .c 665 to 1302 1 to 638       638/638
(100 %)
6 diff
(99.1 %id)
AA146905 uterus .c 665 to 961 1 to 295       295/297
(99 %)
5 diff
(98.4 %id)
DB172343 kidney, tumor tissue .c 665 to 1205 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA864002 placenta .c 666 to 1247 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB235423 trachea .c 666 to 1242 2 to 580   capped   579/582
(99 %)
6 diff
(99.0 %id)
CR625350 Placenta Cot 25-normalized .c 669 to 2289 1 to 1620 L173Q V174L E175K T176H L177*     1620/1620
(100 %)
2 diff
(99.9 %id)
AL544371 placenta, Placenta Cot 25-normalized .c 669 to 1280 1 to 611       611/1027
(59 %)
5 diff
(99.6 %id)
BG618950 Liver .c 671 to 1452 1 to 785 F4S     785/785
(100 %)
7 diff
(99.2 %id)
AL515853 brain, neuroblastoma, neuroblastoma cells .c 674 to 1724 29 to 1069 L107X I155K     1041/1069
(97 %)
19 diff
(98.3 %id)
BI914025 brain .c 674 to 1492 1 to 821 D167*     821/822
(99 %)
7 diff
(99.2 %id)
TI_57240616   .c 674 to 1492 35 to 855 D167*     821/856
(95 %)
18 diff
(97.9 %id)
DN989416 brain, whole brain .c 676 to 1472 1 to 793 exact     793/794
(99 %)
13 diff
(98.4 %id)
DB257453 uterus .c 680 to 1261 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
AA313310 colon .c 681 to 1195 1 to 513       513/513
(100 %)
2 diff
(99.7 %id)
T87007 liver and spleen .c 683 to 965 1 to 286       286/286
(100 %)
9 diff
(96.9 %id)
T81696 liver and spleen .c 684 to 981 4 to 299       296/299
(98 %)
24 diff
(92.0 %id)
BI915538 brain .c 684 to 1549 1 to 865 V43L T44L T45L I46Y P47L ...     865/865
(100 %)
8 diff
(99.1 %id)
TI_57239265   .c 684 to 1549 30 to 894 V43L T44L T45L I46Y P47L ...     865/894
(96 %)
14 diff
(98.5 %id)
BU072118 Pancreas, Purified pancreatic islet .c 685 to 1287 8 to 610       603/610
(98 %)
7 diff
(98.9 %id)
DA478920   .c 686 to 1244 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
DA711588   .c 686 to 1263 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BG253097 adenocarcinoma, cell line, Liver .c 692 to 1396 26 to 725 exact     700/970
(72 %)
22 diff
(97.8 %id)
DR763641 embryonic stem .c 692 to 1506 1 to 815 exact     815/815
(100 %)
0 diff
(100 %id)
BI438244 Pancreas, Purified pancreatic islet .c 702 to 1266 1 to 565       565/565
(100 %)
0 diff
(100 %id)
CA773352 Pancreas, Purified pancreatic islet .c 703 to 1305 1 to 603 exact fully sequenced,   603/603
(100 %)
0 diff
(100 %id)
CA773423.
matches multiple genes
Pancreas, Purified pancreatic islet .c 703 to 1324 1 to 622 exact   also hits gene DNAJC25-GNG10 622/622
(100 %)
0 diff
(100 %id)
AV647197 corresponding non cancerous liver tissue .c 704 to 1109 1 to 406     Submitted on the opposite strand 406/406
(100 %)
3 diff
(99.3 %id)
BM770539 Ascites, stomach .c 725 to 1300 1 to 576       576/576
(100 %)
0 diff
(100 %id)
BM771037 Ascites, stomach .c 725 to 1275 1 to 551       551/551
(100 %)
0 diff
(100 %id)
CN373306 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 733 to 1417 1 to 684 S7V I8Y S10P S11V L12C ...     684/684
(100 %)
1 diff
(99.9 %id)
CB145722 Liver .c 746 to 1152 1 to 406       406/406
(100 %)
2 diff
(99.6 %id)
TI_1948144945   .c 756 to 1260 122 to 627       509/1289
(39 %)
31 diff
(97.6 %id)
AF493887 brain .c 760 to 1305 1 to 546 exact     546/546
(100 %)
0 diff
(100 %id)
BT007260   .c 760 to 1304 1 to 545       545/546
(99 %)
1 diff
(99.9 %id)
CV023102 mixed .c 760 to 1304 1 to 545       545/670
(81 %)
1 diff
(99.9 %id)
BF819291 colon_ins .c 763 to 1208 25 to 471       449/471
(95 %)
11 diff
(97.7 %id)
W31110 senescent fibroblast .c 763 to 1239 34 to 514   fully sequenced,   483/516
(93 %)
17 diff
(96.8 %id)
TI_1948144915   .c 763 to 1304 129 to 671       545/1330
(40 %)
24 diff
(98.2 %id)
BM888216 eye .c 768 to 1337 8 to 581       574/614
(93 %)
16 diff
(97.4 %id)
CN373304 embryonic stem cells, DMSO-treated H9 cellline .c 769 to 1268 1 to 500       500/500
(100 %)
2 diff
(99.6 %id)
T10195   .c 776 to 1116 9 to 349       341/349
(97 %)
9 diff
(97.5 %id)
CB162432 Liver .c 776 to 1428 1 to 653       653/653
(100 %)
0 diff
(100 %id)
W96013 heart .c 782 to 1264 1 to 484   fully sequenced,   484/484
(100 %)
1 diff
(99.8 %id)
TI_149303403   .c 782 to 1613 883 to 63   AAA   821/966
(84 %)
14 diff
(98.6 %id)
R16364 whole brain .c 784 to 1102 1 to 325       325/398
(81 %)
9 diff
(97.8 %id)
TI_154044966   .c 786 to 1613 927 to 110   AAA   818/966
(84 %)
13 diff
(98.7 %id)
AL691909   .c 788 to 1215 1 to 431       431/431
(100 %)
7 diff
(98.4 %id)
AA232829 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 796 to 1235 1 to 440   fully sequenced,   440/440
(100 %)
2 diff
(99.6 %id)
CB122395 Liver .c 796 to 1460 1 to 665       665/665
(100 %)
0 diff
(100 %id)
H98568 melanocyte .c 798 to 1090 1 to 298       298/298
(100 %)
5 diff
(98.4 %id)
AI927294 Kidney .c 802 to 1413 612 to 1       612/612
(100 %)
7 diff
(98.9 %id)
AV725133 hypothalamus .c 805 to 1510 19 to 721       703/722
(97 %)
14 diff
(98.1 %id)
CB131891 Liver .c 805 to 1414 1 to 610       610/610
(100 %)
0 diff
(100 %id)
CB160104 Liver .c 805 to 1427 1 to 623       623/623
(100 %)
0 diff
(100 %id)
EL954401 eyeball .c 817 to 1327 110 to 620       511/620
(82 %)
9 diff
(98.6 %id)
AI654122 Kidney .c 823 to 1613 812 to 23   AAA   790/796
(99 %)
7 diff
(99.2 %id)
BG434380 placenta .c 828 to 1291 1 to 464       464/464
(100 %)
0 diff
(100 %id)
BU857378 adenocarcinoma, cell line, breast .c 845 to 1613 1 to 769   AAA   769/769
(100 %)
0 diff
(100 %id)
CB135012 Liver .c 845 to 1343 1 to 499       499/499
(100 %)
2 diff
(99.6 %id)
FN096236 breast carcinoma .c 849 to 931 1 to 82       82/83
(98 %)
2 diff
(97.6 %id)
BQ356446 head_neck .c 854 to 1047 10 to 206       197/217
(90 %)
10 diff
(95.4 %id)
CD108632 brain, Pituitary .c 870 to 1605 18 to 755   AAA   738/755
(97 %)
7 diff
(99.1 %id)
R78751 placenta .c 886 to 1255 1 to 382   fully sequenced,   382/382
(100 %)
16 diff
(95.9 %id)
AA027906 uterus .c 894 to 1204 1 to 312       312/313
(99 %)
4 diff
(98.8 %id)
BQ374488 testis .c 898 to 1386 40 to 527       490/527
(92 %)
13 diff
(97.6 %id)
AW183152 pooled .c 898 to 1611 712 to 2       711/712
(99 %)
11 diff
(98.5 %id)
BQ321020 colon .c 902 to 1456 1 to 560       560/560
(100 %)
12 diff
(97.9 %id)
CA411869 Chondrosarcoma Grade II, Left Pelvis .c 903 to 1613 729 to 19   AAA   711/711
(100 %)
0 diff
(100 %id)
TI_149303941   .c 913 to 1623 792 to 83   AAA   710/711
(99 %)
2 diff
(99.8 %id)
BM981426 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 915 to 1613 717 to 19   AAA   699/699
(100 %)
1 diff
(99.9 %id)
R34819 placenta .c 918 to 1245 1 to 340       340/352
(96 %)
15 diff
(95.8 %id)
TI_154103481   .c 919 to 1613 779 to 85   AAA   695/985
(70 %)
1 diff
(99.9 %id)
CK725138 Chondrosarcoma, Left Pubic Bone .c 919 to 1613 713 to 19   AAA   695/705
(98 %)
1 diff
(99.9 %id)
H13610 placenta .c 926 to 1275 24 to 380       357/429
(83 %)
14 diff
(96.8 %id)
BF058308 fibrotheoma, ovary .c 940 to 1623 684 to 1       684/684
(100 %)
3 diff
(99.6 %id)
BE671606 carcinoid, lung .c 943 to 1617 675 to 1       675/675
(100 %)
6 diff
(99.2 %id)
CA310226 Alveolar Macrophage, lung .c 949 to 1613 682 to 19   AAA   664/664
(100 %)
1 diff
(99.9 %id)
BU532256 mixed (pool of 40 RNAs) .c 952 to 1615 1 to 666   AAA   666/670
(99 %)
14 diff
(98.0 %id)
CD368723 Alveolar Macrophage, lung .c 952 to 1613 678 to 17   AAA   662/662
(100 %)
0 diff
(100 %id)
AA776847   .c 961 to 1414 458 to 4       455/458
(99 %)
17 diff
(96.3 %id)
BM981850 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 961 to 1623 680 to 19   AAA   662/662
(100 %)
1 diff
(99.9 %id)
AI948488 2 pooled tumors (clear cell type), Kidney .c 967 to 1613 662 to 18   AAA   645/646
(99 %)
14 diff
(97.9 %id)
BQ447726 Knee, Osteoarthritic Cartilage .c 969 to 1597 646 to 19   AAA   628/628
(100 %)
1 diff
(99.9 %id)
AI950097 2 pooled tumors (clear cell type), Kidney .c 982 to 1613 652 to 21   AAA   632/647
(97 %)
13 diff
(98.0 %id)
CA773568 Pancreas, Purified pancreatic islet .c 982 to 1616 635 to 1       635/635
(100 %)
0 diff
(100 %id)
R79439 placenta .c 991 to 1377 1 to 403       403/407
(99 %)
23 diff
(94.4 %id)
DA712966   .c 1003 to 1559 2 to 555   capped   554/554
(100 %)
5 diff
(99.1 %id)
AU133237   .c 1008 to 1856 2 to 845   capped   844/847
(99 %)
10 diff
(98.9 %id)
DA812975   .c 1008 to 1835 2 to 827   capped   826/828
(99 %)
12 diff
(98.6 %id)
DA027240   .c 1009 to 1576 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BM510639 insulinoma, Pancreas .c 1009 to 1613 629 to 25   AAA   605/605
(100 %)
3 diff
(99.6 %id)
BP259056 heart .c 1010 to 1552 1 to 541       541/550
(98 %)
20 diff
(96.4 %id)
AW275334 Kidney .c 1012 to 1624 614 to 2       613/614
(99 %)
11 diff
(98.3 %id)
DA153214 amygdala .c 1013 to 1584 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BQ672897 epidermoid carcinoma, cell line, salivary gland .c 1013 to 1613 1 to 601   AAA   601/601
(100 %)
0 diff
(100 %id)
DA341810 substantia nigra .c 1014 to 1502 2 to 491   capped   490/490
(100 %)
1 diff
(99.8 %id)
DA374107 thalamus .c 1015 to 1544 9 to 538   capped   530/530
(100 %)
0 diff
(100 %id)
CB963859 Blood vessels - aorta, basilar and artery .c 1018 to 1738 1 to 735       735/783
(93 %)
36 diff
(95.5 %id)
DA870960 Prostate .c 1025 to 1598 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB171245 kidney, tumor tissue .c 1025 to 1596 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB173049 kidney, tumor tissue .c 1025 to 1604 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
AL578450 placenta .c 1026 to 2110 1114 to 38       1077/1149
(93 %)
8 diff
(99.4 %id)
DB195129 trachea .c 1027 to 1544 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DB208045 trachea .c 1027 to 1536 2 to 512   capped   511/511
(100 %)
2 diff
(99.7 %id)
DA719660   .c 1028 to 1498 2 to 472   capped   471/471
(100 %)
0 diff
(100 %id)
AI379187 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1035 to 1598 570 to 9       562/574
(97 %)
8 diff
(98.7 %id)
BP342905 stomach mucosa .c 1036 to 1613 1 to 578       578/578
(100 %)
4 diff
(99.4 %id)
AU126018   .c 1040 to 1933 2 to 891   capped   890/891
(99 %)
14 diff
(98.5 %id)
BI467238 Pancreas, Purified pancreatic islet .c 1042 to 1605 580 to 17   AAA   564/564
(100 %)
2 diff
(99.7 %id)
BF376256 testis_normal .c 1044 to 1280 307 to 70       238/307
(77 %)
0 diff
(100 %id)
CF123318 CNCAP(3)T-225 cell line, Prostate .c 1046 to 1805 1 to 758       758/765
(99 %)
12 diff
(98.5 %id)
CF123378 CNCAP(3)T-225 cell line, Prostate .c 1046 to 1603 1 to 558       558/558
(100 %)
9 diff
(98.4 %id)
TI_154183241   .c 1053 to 1871 77 to 886       810/813
(99 %)
17 diff
(98.0 %id)
TI_154183321   .c 1053 to 1717 77 to 741       665/756
(87 %)
23 diff
(97.0 %id)
AI420844 Prostate .c 1054 to 1619 568 to 5       564/572
(98 %)
5 diff
(99.2 %id)
AI417041 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1057 to 1613 557 to 1       557/557
(100 %)
5 diff
(99.2 %id)
AI417857 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1066 to 1624 560 to 2       559/560
(99 %)
1 diff
(99.9 %id)
AI952810 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 1066 to 1624 560 to 2       559/560
(99 %)
1 diff
(99.9 %id)
BE253357 eye, retinoblastoma .c 1066 to 1570 1 to 505       505/505
(100 %)
3 diff
(99.5 %id)
AA913702 pooled .c 1069 to 1612 543 to 1       543/543
(100 %)
3 diff
(99.5 %id)
FN081990 breast carcinoma .c 1070 to 1150 1 to 80       80/81
(98 %)
3 diff
(96.3 %id)
BM828089 Ascites, stomach .c 1071 to 1555 1 to 485       485/485
(100 %)
1 diff
(99.8 %id)
BG186167   .c 1090 to 1924 51 to 886       842/940
(89 %)
52 diff
(94.5 %id)
AA723579 parathyroid gland, parathyroid tumor .c 1094 to 1613 537 to 18   AAA   520/527
(98 %)
1 diff
(99.9 %id)
T86928 liver and spleen .c 1094 to 1611 532 to 3       530/536
(98 %)
16 diff
(97.1 %id)
AA916657 adenocarcinoma, colon .c 1094 to 1294 201 to 1       201/205
(98 %)
13 diff
(93.7 %id)
AI205830   .c 1094 to 1414 323 to 3       321/386
(83 %)
1 diff
(99.8 %id)
BG190815   .c 1104 to 1611 1 to 508       508/511
(99 %)
9 diff
(98.3 %id)
AA962778 2 pooled tumors (clear cell type), Kidney .c 1119 to 1624 511 to 7       505/519
(97 %)
4 diff
(99.3 %id)
AI093193 heart .c 1120 to 1624 505 to 1       505/505
(100 %)
0 diff
(100 %id)
AI299081 2 pooled tumors (clear cell type), Kidney .c 1120 to 1605 508 to 24   AAA   485/485
(100 %)
8 diff
(98.4 %id)
AI276140 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1123 to 1613 491 to 1       491/491
(100 %)
2 diff
(99.6 %id)
AI336030 lung .c 1123 to 1606 485 to 2       484/485
(99 %)
0 diff
(100 %id)
AI346472 adenocarcinoma, colon .c 1126 to 1613 488 to 1       488/488
(100 %)
0 diff
(100 %id)
AW851013 colon .c 1129 to 1498 9 to 379       371/379
(97 %)
11 diff
(97.1 %id)
AW072156 pooled .c 1135 to 1624 502 to 13       490/502
(97 %)
5 diff
(99.1 %id)
DA260416 caudate nucleus .c 1136 to 1698 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
EC452273 Prostate .c 1140 to 1242 1 to 101       101/101
(100 %)
2 diff
(98.1 %id)
AA781239 parathyroid gland, parathyroid tumor .c 1144 to 1598 457 to 3       455/457
(99 %)
0 diff
(100 %id)
N51280 multiple sclerosis lesions .c 1144 to 1623 482 to 1       482/484
(99 %)
6 diff
(98.8 %id)
FN156852 breast carcinoma .c 1156 to 1222 13 to 78       66/79
(83 %)
2 diff
(97.5 %id)
H98542 melanocyte .c 1163 to 1552 391 to 1       391/391
(100 %)
3 diff
(99.3 %id)
AA314016 colon .c 1176 to 1610 1 to 435       435/435
(100 %)
1 diff
(99.8 %id)
AW949335   .c 1177 to 1692 1 to 516       516/517
(99 %)
4 diff
(99.3 %id)
BX420908 brain, fetal brain .c 1180 to 2120 964 to 29       936/964
(97 %)
8 diff
(99.2 %id)
BG291089 bladder, transitional cell papilloma, cell line .c 1187 to 1913 1 to 715       715/944
(75 %)
21 diff
(97.8 %id)
AI082414 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1188 to 1623 447 to 12   AAA   436/436
(100 %)
3 diff
(99.4 %id)
AI274055 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1189 to 1620 469 to 29       441/470
(93 %)
5 diff
(99.0 %id)
AI273552 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1195 to 1300 106 to 1       106/106
(100 %)
3 diff
(97.2 %id)
AW291732   .c 1201 to 1623 440 to 18   AAA   423/423
(100 %)
2 diff
(99.6 %id)
AI767022 2 pooled tumors (clear cell type), Kidney .c 1204 to 1300 97 to 1       97/100
(97 %)
1 diff
(99.0 %id)
AA233883 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1205 to 1613 410 to 1   fully sequenced,   410/410
(100 %)
4 diff
(99.1 %id)
AW394103 testis .c 1207 to 1739 544 to 12       533/544
(97 %)
2 diff
(99.7 %id)
AI468453 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1207 to 1622 417 to 2       416/417
(99 %)
0 diff
(100 %id)
N99968 senescent fibroblast .c 1209 to 1606 397 to 8   fully sequenced,   390/397
(98 %)
4 diff
(99.0 %id)
CN373305 embryonic stem cells, DMSO-treated H9 cellline .c 1217 to 1838 8 to 629       622/629
(98 %)
6 diff
(99.1 %id)
AV695898 hepatocellular carcinoma .c 1219 to 1623 1 to 405   AAA   405/405
(100 %)
0 diff
(100 %id)
AA731537 germinal center B cell .c 1223 to 1623 425 to 25   AAA   401/401
(100 %)
1 diff
(99.8 %id)
R79060 placenta .c 1225 to 1587 366 to 1   fully sequenced,   366/366
(100 %)
6 diff
(98.4 %id)
FN129122 breast carcinoma .c 1226 to 1330 1 to 106       106/106
(100 %)
2 diff
(98.2 %id)
DA353866 substantia nigra .c 1227 to 1791 2 to 569   capped   568/568
(100 %)
4 diff
(99.3 %id)
AI640206 Kidney .c 1233 to 1619 400 to 14       387/400
(96 %)
0 diff
(100 %id)
AI640207 Kidney .c 1233 to 1624 400 to 9       392/400
(98 %)
0 diff
(100 %id)
W94867 heart .c 1234 to 1624 398 to 7   fully sequenced,   392/398
(98 %)
1 diff
(99.8 %id)
AI640198 Kidney .c 1234 to 1300 67 to 1       67/67
(100 %)
0 diff
(100 %id)
DN913772   .c 1235 to 1612 378 to 1       378/378
(100 %)
1 diff
(99.8 %id)
AW394076 testis .c 1237 to 1705 473 to 4       470/494
(95 %)
6 diff
(98.8 %id)
R92374 liver and spleen .c 1241 to 1606 368 to 2       367/369
(99 %)
0 diff
(100 %id)
CA773643 Pancreas, Purified pancreatic islet .c 1244 to 1616 373 to 1   fully sequenced,   373/373
(100 %)
0 diff
(100 %id)
AW995536 breast_normal .c 1251 to 1465 217 to 5     Submitted on the opposite strand 213/217
(98 %)
0 diff
(100 %id)
DR762742 embryonic stem .c 1259 to 1635 1 to 377       377/377
(100 %)
0 diff
(100 %id)
BM771705 stomach .c 1266 to 1927 1 to 662       662/662
(100 %)
0 diff
(100 %id)
CN373309 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 1269 to 1934 1 to 666       666/666
(100 %)
0 diff
(100 %id)
AA732762   .c 1274 to 1606 337 to 5       333/339
(98 %)
0 diff
(100 %id)
FN060577 breast carcinoma .c 1274 to 1380 108 to 1     Submitted on the opposite strand 108/113
(95 %)
1 diff
(99.2 %id)
N29663 placenta .c 1279 to 1623 347 to 1       347/347
(100 %)
5 diff
(98.6 %id)
AI701728 pooled .c 1284 to 1609 327 to 1       327/327
(100 %)
1 diff
(99.7 %id)
EC446635 Prostate .c 1291 to 1390 99 to 1       99/101
(98 %)
1 diff
(99.1 %id)
AI351016   .c 1295 to 1624 330 to 1       330/330
(100 %)
1 diff
(99.7 %id)
BX413790 brain, fetal brain .c 1304 to 2158 861 to 1       861/862
(99 %)
29 diff
(96.7 %id)
AI914661 pooled .c 1307 to 1623 322 to 1       322/322
(100 %)
5 diff
(98.5 %id)
FN166854 breast carcinoma .c 1312 to 1414 1 to 106       106/106
(100 %)
1 diff
(99.1 %id)
BQ019323 Chondrosarcoma, Left Pubic Bone .c 1316 to 1624 316 to 8       309/320
(96 %)
0 diff
(100 %id)
T81484 liver and spleen .c 1330 to 1582 258 to 1       258/258
(100 %)
8 diff
(96.9 %id)
BP387986 pancreatic islet .c 1335 to 1756 423 to 1       423/423
(100 %)
1 diff
(99.8 %id)
AI470964 Kidney .c 1345 to 1623 300 to 22   AAA   279/279
(100 %)
4 diff
(98.6 %id)
AI572204 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1349 to 1606 259 to 2       258/259
(99 %)
0 diff
(100 %id)
BF326825 breast_normal .c 1376 to 1485 110 to 1       110/110
(100 %)
0 diff
(100 %id)
AI868283 pooled .c 1380 to 1623 257 to 14   AAA   244/244
(100 %)
1 diff
(99.6 %id)
AL570522 placenta, Placenta Cot 25-normalized .c 1381 to 2270 893 to 13       881/997
(88 %)
7 diff
(99.3 %id)
FN171330 breast carcinoma .c 1382 to 1489 1 to 106       106/106
(100 %)
3 diff
(97.2 %id)
AA558922 breast .c 1388 to 1612 225 to 1       225/225
(100 %)
0 diff
(100 %id)
T78651 liver and spleen .c 1394 to 1624 233 to 3       231/233
(99 %)
0 diff
(100 %id)
DA295698 hippocampus .c 1400 to 1957 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
CA942193 Pancreas, Purified pancreatic islet .c 1410 to 1934 1 to 526       526/526
(100 %)
1 diff
(99.9 %id)
AW496790   .c 1432 to 1618 187 to 1       187/187
(100 %)
0 diff
(100 %id)
BP424432 small intestine .c 1449 to 2008 1 to 561     Submitted on the opposite strand 561/561
(100 %)
1 diff
(99.9 %id)
AI002565 Kidney, kidney tumor .c 1450 to 1783 335 to 2       334/335
(99 %)
0 diff
(100 %id)
AA865045 Kidney, kidney tumor .c 1451 to 1783 333 to 1       333/333
(100 %)
0 diff
(100 %id)
DA139791 alzheimer cortex .c 1456 to 2025 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
D20919   .c 1481 to 1616 1 to 136     Submitted on the opposite strand 136/136
(100 %)
0 diff
(100 %id)
BU627392 Bone, Enchondroma cell line .c 1482 to 2181 718 to 19   AAA   700/700
(100 %)
0 diff
(100 %id)
FN164282 breast carcinoma .c 1491 to 1602 113 to 1     Submitted on the opposite strand 113/113
(100 %)
2 diff
(98.3 %id)
AW496789   .c 1492 to 1585 94 to 1       94/94
(100 %)
0 diff
(100 %id)
AW496791   .c 1494 to 1605 112 to 1       112/112
(100 %)
0 diff
(100 %id)
BF803137 colon_ins .c 1502 to 1700 1 to 199       199/205
(97 %)
1 diff
(99.6 %id)
BX373631 Placenta Cot 25-normalized .c 1502 to 2152 660 to 1   fully sequenced,   660/660
(100 %)
35 diff
(94.7 %id)
DA829614 placenta .c 1502 to 2243 2 to 747   capped   746/778
(95 %)
7 diff
(99.2 %id)
DA026710   .c 1503 to 2080 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
AL572886 placenta, Placenta Cot 25-normalized .c 1537 to 2154 619 to 1   fully sequenced,   619/619
(100 %)
3 diff
(99.6 %id)
AL578340 placenta .c 1551 to 2261 710 to 1   fully sequenced,   710/710
(100 %)
19 diff
(97.4 %id)
DB187563 liver, tumor tissue .c 1556 to 2129 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA349136 substantia nigra .c 1562 to 2046 2 to 486   capped   485/485
(100 %)
0 diff
(100 %id)
AL569535 placenta .c 1563 to 2141 578 to 1   fully sequenced,   578/578
(100 %)
7 diff
(98.8 %id)
DB013718 esophageal, tumor tissue .c 1570 to 2139 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
BM504301 insulinoma, Pancreas .c 1573 to 2012 8 to 447       440/447
(98 %)
6 diff
(98.7 %id)
BQ003532 Chondrosarcoma, Left Pelvis .c 1573 to 2181 627 to 19   AAA   609/609
(100 %)
1 diff
(99.9 %id)
AW969418   .c 1574 to 2180 608 to 1     Submitted on the opposite strand 608/608
(100 %)
3 diff
(99.6 %id)
T81369 liver and spleen .c 1579 to 1892 330 to 10       321/330
(97 %)
0 diff
(100 %id)
DA159779 amygdala .c 1582 to 2161 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DB180263 kidney, tumor tissue .c 1587 to 2143 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA832147 placenta .c 1589 to 2368 2 to 789   capped   788/814
(96 %)
20 diff
(97.6 %id)
AW394083 testis .c 1593 to 1699 109 to 1       109/109
(100 %)
8 diff
(92.7 %id)
BU623209 cell lines, Chondrosarcoma .c 1606 to 2336 749 to 19   AAA   731/731
(100 %)
2 diff
(99.8 %id)
AI076608   .c 1621 to 2185 565 to 1       565/565
(100 %)
0 diff
(100 %id)
BF940262 Kidney .c 1622 to 2181 560 to 1       560/560
(100 %)
0 diff
(100 %id)
DA578928   .c 1626 to 2175 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
BQ268686 Pancreas, Purified pancreatic islet .c 1632 to 2181 550 to 1       550/550
(100 %)
0 diff
(100 %id)
DA151803 amygdala .c 1635 to 2206 2 to 570   capped   569/569
(100 %)
15 diff
(97.4 %id)
BU166923 melanotic melanoma, skin .c 1646 to 2303 1 to 658   AAA   658/658
(100 %)
0 diff
(100 %id)
CA391364 eye, RPE/choroid .c 1647 to 1884 1 to 238       238/238
(100 %)
1 diff
(99.6 %id)
DA472080   .c 1647 to 2386 2 to 744   capped   743/862
(86 %)
4 diff
(99.6 %id)
DA748208   .c 1651 to 2221 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA998540   .c 1655 to 2219 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
AI313185 lung .c 1677 to 2181 505 to 1       505/505
(100 %)
0 diff
(100 %id)
BE890745 melanotic melanoma, skin .c 1677 to 2185 1 to 511       511/1010
(50 %)
7 diff
(99.4 %id)
AI590307 Kidney .c 1692 to 2181 490 to 1       490/490
(100 %)
0 diff
(100 %id)
AI017439 Kidney .c 1693 to 2185 496 to 4       493/496
(99 %)
0 diff
(100 %id)
AI985266 Kidney .c 1696 to 2181 486 to 1       486/486
(100 %)
0 diff
(100 %id)
BM351860 Pancreas, Purified pancreatic islet .c 1707 to 2182 476 to 1       476/476
(100 %)
0 diff
(100 %id)
DB543010 hippocampus .c 1711 to 2181 1 to 471     Submitted on the opposite strand 471/471
(100 %)
1 diff
(99.8 %id)
AI092621 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1715 to 2180 466 to 1       466/466
(100 %)
0 diff
(100 %id)
BE535180 cervix .c 1742 to 2427 1 to 676       676/940
(71 %)
58 diff
(93.9 %id)
AA393816.
matches multiple genes
  .c 1743 to 2185 446 to 4     also hits gene TRAM1 443/446
(99 %)
0 diff
(100 %id)
BG565452 Liver .c 1743 to 2294 1 to 551       551/551
(100 %)
1 diff
(99.9 %id)
AA609830 lung, lung carcinoma .c 1744 to 2188 446 to 2       445/446
(99 %)
0 diff
(100 %id)
AI739354 colon, colon tumor, RER+ .c 1755 to 2185 432 to 2       431/432
(99 %)
0 diff
(100 %id)
BM510655 insulinoma, Pancreas .c 1756 to 2323 583 to 16   AAA   568/568
(100 %)
0 diff
(100 %id)
DB547716 hippocampus .c 1758 to 2181 1 to 424     Submitted on the opposite strand 424/424
(100 %)
0 diff
(100 %id)
N98729 senescent fibroblast .c 1758 to 2310 550 to 2       549/563
(97 %)
0 diff
(100 %id)
CN373307 embryonic stem cells, DMSO-treated H9 cellline .c 1765 to 2184 1 to 420       420/420
(100 %)
0 diff
(100 %id)
AA455083 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1768 to 2183 416 to 1       416/416
(100 %)
0 diff
(100 %id)
AA493714 thyroid .c 1771 to 2181 421 to 11   AAA   411/411
(100 %)
1 diff
(99.8 %id)
N36233 melanocyte .c 1774 to 2181 409 to 1       409/409
(100 %)
1 diff
(99.8 %id)
BX474097   .c 1779 to 2326 15 to 574       560/574
(97 %)
6 diff
(99.0 %id)
AI870707 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 1783 to 2181 399 to 1       399/399
(100 %)
1 diff
(99.8 %id)
BG287606 bladder, transitional cell papilloma, cell line .c 1787 to 2537 1 to 743       743/931
(79 %)
19 diff
(98.0 %id)
AA235859 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1789 to 2182 394 to 1       394/394
(100 %)
0 diff
(100 %id)
AI082534   .c 1792 to 2185 392 to 1       392/392
(100 %)
2 diff
(99.5 %id)
BM986770 mixed .c 1794 to 2181 406 to 19   AAA   388/396
(97 %)
7 diff
(98.3 %id)
BQ575337 Chondrosarcoma Grade II, Left Pelvis .c 1796 to 2323 546 to 19   AAA   528/528
(100 %)
9 diff
(98.3 %id)
BQ435945 melanotic melanoma, skin .c 1798 to 2668 17 to 891       875/892
(98 %)
14 diff
(98.5 %id)
DA597984   .c 1807 to 2368 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
AI569628 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 1815 to 2185 370 to 1       370/384
(96 %)
1 diff
(99.8 %id)
AI569818 Kidney .c 1820 to 2184 365 to 1       365/365
(100 %)
1 diff
(99.8 %id)
R42309 whole brain .c 1826 to 2171 362 to 11   AAA   352/354
(99 %)
8 diff
(97.8 %id)
R79440 placenta .c 1829 to 2162 342 to 1       342/342
(100 %)
9 diff
(97.4 %id)
BU520822 leiomyosarcoma, uterus .c 1838 to 2545 1 to 717       717/910
(78 %)
17 diff
(98.2 %id)
DA829502 placenta .c 1843 to 2473 2 to 636   capped   635/746
(85 %)
7 diff
(99.1 %id)
AA480260 colon .c 1844 to 2181 338 to 1       338/338
(100 %)
1 diff
(99.8 %id)
AA622011 colon, colon tumor RER+ .c 1877 to 2323 447 to 1       447/447
(100 %)
0 diff
(100 %id)
AA858240 epithelium (cell line), Prostate .c 1881 to 2181 301 to 1       301/301
(100 %)
0 diff
(100 %id)
AI473130 Kidney .c 1902 to 2181 280 to 1       280/289
(96 %)
0 diff
(100 %id)
CF146186 CNCAP(3)T-225 cell line, Prostate .c 1904 to 2577 1 to 674       674/674
(100 %)
6 diff
(99.2 %id)
TI_154178577   .c 1911 to 2727 69 to 885       817/817
(100 %)
9 diff
(98.9 %id)
T10194   .c 1927 to 2172 249 to 3       247/249
(99 %)
0 diff
(100 %id)
BM790275 Ascites, stomach .c 1929 to 2426 1 to 498       498/498
(100 %)
12 diff
(97.6 %id)
C21521   .c 1932 to 2164 1 to 233       233/239
(97 %)
1 diff
(99.6 %id)
BU172367 melanotic melanoma, skin .c 1946 to 2810 1 to 868       868/868
(100 %)
5 diff
(99.5 %id)
AW191737 Pancreas, pancreatic islets .c 1950 to 2122 1 to 173       173/181
(95 %)
2 diff
(98.9 %id)
AW805831 uterus .c 1963 to 2133 171 to 1       171/171
(100 %)
2 diff
(98.9 %id)
AI245327 Kidney .c 1976 to 2324 349 to 2       348/349
(99 %)
0 diff
(100 %id)
BP425396 small intestine .c 1994 to 2561 1 to 568     Submitted on the opposite strand 568/568
(100 %)
3 diff
(99.5 %id)
BE168785 head_neck .c 2006 to 2424 12 to 429       418/429
(97 %)
6 diff
(98.7 %id)
BM504067 insulinoma, Pancreas .c 2033 to 2324 299 to 8       292/299
(97 %)
0 diff
(100 %id)
BM829033 Ascites, stomach .c 2048 to 2279 1 to 232       232/235
(98 %)
2 diff
(99.2 %id)
BF959274 nervous_normal .c 2098 to 2693 17 to 612       596/612
(97 %)
6 diff
(99.1 %id)
AW379568 head_neck .c 2148 to 2574 1 to 425       425/441
(96 %)
33 diff
(92.6 %id)
CD514097 brain, Pituitary .c 2151 to 2957 1 to 817       817/906
(90 %)
22 diff
(97.6 %id)
AK001489   .c 2181 to 3806 1 to 1626   tiling clone, available from FLJ,   1626/1626
(100 %)
1 diff
(100.0 %id)
AU129447   .c 2182 to 2887 2 to 703   capped   702/703
(99 %)
10 diff
(98.6 %id)
AW752864 colon .c 2190 to 2644 505 to 52       454/505
(89 %)
0 diff
(100 %id)
AU116848 whole embryo, mainly head .c 2261 to 3018 2 to 762   capped   761/761
(100 %)
10 diff
(98.7 %id)
BG678119 skin, squamous cell carcinoma .c 2290 to 2997 1 to 708       708/708
(100 %)
0 diff
(100 %id)
CD518290 White Matter .c 2313 to 3102 1 to 797   tiling clone,   797/856
(93 %)
11 diff
(98.8 %id)
BP424110 small intestine .c 2351 to 2849 1 to 500     Submitted on the opposite strand 500/500
(100 %)
1 diff
(99.8 %id)
BP423349 small intestine .c 2363 to 2821 18 to 478     Submitted on the opposite strand 461/478
(96 %)
6 diff
(98.8 %id)
BP425266 small intestine .c 2416 to 2948 1 to 533     Submitted on the opposite strand 533/533
(100 %)
0 diff
(100 %id)
BF358559 lung_normal .c 2443 to 2814 5 to 372       368/372
(98 %)
6 diff
(98.4 %id)
BF358554 lung_normal .c 2467 to 2815 12 to 360       349/360
(96 %)
6 diff
(98.4 %id)
FN135259 breast carcinoma .c 2484 to 2588 5 to 104       100/104
(96 %)
7 diff
(93.3 %id)
BF358570 lung_normal .c 2502 to 2836 358 to 24       335/358
(93 %)
0 diff
(100 %id)
BG696392 skin .c 2529 to 3094 1 to 569       569/569
(100 %)
3 diff
(99.5 %id)
CD513264 brain, Pituitary .c 2574 to 3145 1 to 584       584/597
(97 %)
56 diff
(90.7 %id)
FN070250 breast carcinoma .c 2582 to 2695 1 to 114       114/115
(99 %)
7 diff
(94.0 %id)
BM696405 eye, lens .c 2591 to 3003 1 to 413       413/413
(100 %)
9 diff
(97.9 %id)
BF965715 Bone, osteosarcoma, cell line .c 2647 to 3368 1 to 713       713/769
(92 %)
34 diff
(95.6 %id)
BF326604 breast_normal .c 2658 to 2885 236 to 8       229/236
(97 %)
8 diff
(96.7 %id)
CB215458 normal endometrium, late proliferativephase, cycle day 13, uterus .c 2689 to 3326 1 to 638       638/638
(100 %)
0 diff
(100 %id)
AL515852 brain, neuroblastoma, neuroblastoma cells .c 2701 to 3756 1052 to 4       1049/1067
(98 %)
0 diff
(100 %id)
BX405523 fetal liver, Liver .c 2791 to 3729 945 to 11       935/977
(95 %)
0 diff
(100 %id)
BF979839 testis .c 2804 to 3582 780 to 2       779/783
(99 %)
0 diff
(100 %id)
BQ086189 Islets of Langerhans, Pancreas .c 2852 to 3439 1 to 589       589/589
(100 %)
3 diff
(99.5 %id)
CK822905 Islets of Langerhans, Pancreas .c 2852 to 3237 1 to 386       386/386
(100 %)
1 diff
(99.8 %id)
AW860676 colon .c 2976 to 3328 16 to 368       353/368
(95 %)
6 diff
(98.4 %id)
AW821784 stomach .c 2985 to 3332 369 to 23       347/369
(94 %)
0 diff
(100 %id)
BF375775 stomach .c 2985 to 3332 369 to 23       347/369
(94 %)
0 diff
(100 %id)
AU149562   .c 3049 to 3619 571 to 1       571/573
(99 %)
6 diff
(99.0 %id)
BM142116 Islets of Langerhans, Pancreas .c 3050 to 3598 8 to 556       549/556
(98 %)
6 diff
(99.0 %id)
BM996868 lung, Metastatic Chondrosarcoma .c 3058 to 3592 555 to 19   AAA   537/537
(100 %)
3 diff
(99.5 %id)
DB378175 placenta .c 3078 to 3619 540 to 1       540/562
(96 %)
17 diff
(97.0 %id)
DB350008 trachea .c 3096 to 3619 524 to 1       524/524
(100 %)
0 diff
(100 %id)
AW821786 stomach .c 3104 to 3329 234 to 2       233/234
(99 %)
0 diff
(100 %id)
BQ363944 stomach .c 3104 to 3329 234 to 2       233/234
(99 %)
0 diff
(100 %id)
AU156455 placenta .c 3137 to 3619 482 to 1       482/486
(99 %)
8 diff
(98.4 %id)
BM929287 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 3145 to 3774 1 to 630       630/630
(100 %)
0 diff
(100 %id)
BX401842   .c 3155 to 3588 436 to 1       436/768
(56 %)
15 diff
(98.1 %id)
AA658188   .c 3157 to 3555 1 to 398       398/398
(100 %)
6 diff
(98.5 %id)
AW975085   .c 3159 to 3642 112 to 595   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 484/595
(81 %)
6 diff
(99.0 %id)
AW468490 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .c 3164 to 3619 456 to 1       456/456
(100 %)
0 diff
(100 %id)
AA410271 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3167 to 3496 1 to 329   fully sequenced,   329/329
(100 %)
2 diff
(99.4 %id)
AA152126 uterus .c 3172 to 3631 1 to 464       464/465
(99 %)
6 diff
(98.8 %id)
W16475 lung .c 3190 to 3576 1 to 382       382/382
(100 %)
6 diff
(98.5 %id)
AW473972 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 3190 to 3619 456 to 27   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 430/430
(100 %)
0 diff
(100 %id)
AI475944 colon, moderately-differentiated adenocarcinoma .c 3209 to 3619 411 to 1       411/411
(100 %)
0 diff
(100 %id)
BF821859 kidney_tumor .c 3219 to 3613 1 to 394       394/401
(98 %)
8 diff
(98.1 %id)
FN069173 breast carcinoma .c 3219 to 3305 88 to 1     Submitted on the opposite strand 88/89
(98 %)
1 diff
(98.9 %id)
AI360390 anaplastic oligodendroglioma, brain .c 3224 to 3619 396 to 1       396/396
(100 %)
0 diff
(100 %id)
DB302091 amygdala .c 3226 to 3800 575 to 1       575/575
(100 %)
2 diff
(99.7 %id)
AU151560   .c 3231 to 3806 582 to 1       582/590
(98 %)
14 diff
(97.7 %id)
FN074755 breast carcinoma .c 3234 to 3299 70 to 5     Submitted on the opposite strand 66/71
(92 %)
0 diff
(100 %id)
CK822904 Islets of Langerhans, Pancreas .c 3238 to 3820 588 to 6       583/588
(99 %)
0 diff
(100 %id)
BM669147 eye, lens .c 3244 to 3806 575 to 13   AAA   563/563
(100 %)
5 diff
(99.2 %id)
AU143828 whole embryo, mainly head .c 3263 to 3806 542 to 1       542/542
(100 %)
5 diff
(99.1 %id)
AU154607   .c 3265 to 3828 563 to 1       563/563
(100 %)
7 diff
(98.8 %id)
BF930021 nervous_tumor .c 3266 to 3613 348 to 4     Submitted on the opposite strand 345/348
(99 %)
0 diff
(100 %id)
AI357567 brain, glioblastoma (pooled) .c 3295 to 3800 506 to 1       506/506
(100 %)
0 diff
(100 %id)
BQ102294 Islets of Langerhans, Pancreas .c 3295 to 3820 531 to 6       526/531
(99 %)
0 diff
(100 %id)
BF352364 head_neck .c 3299 to 3611 7 to 322       316/331
(95 %)
7 diff
(97.9 %id)
CA941909 Pancreas, Purified pancreatic islet .c 3305 to 3800 507 to 12   AAA   496/496
(100 %)
4 diff
(99.2 %id)
AW874359 tumor, uterus .c 3335 to 3806 487 to 16   AAA   472/472
(100 %)
4 diff
(99.2 %id)
AA226320   .c 3362 to 3634 38 to 310   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 273/310
(88 %)
6 diff
(98.1 %id)
BF756901 colon .c 3369 to 3606 260 to 22     Submitted on the opposite strand 239/278
(85 %)
0 diff
(100 %id)
CB143885 Liver .c 3371 to 3809 456 to 18     Submitted on the opposite strand 439/456
(96 %)
0 diff
(100 %id)
AI122554 heart .c 3376 to 3818 443 to 1       443/443
(100 %)
1 diff
(99.8 %id)
AI091013 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3378 to 3802 425 to 1       425/425
(100 %)
0 diff
(100 %id)
FN105912 breast carcinoma .c 3379 to 3479 1 to 100       100/100
(100 %)
3 diff
(97.0 %id)
F37355 pectoral muscle (after mastectomy) .c 3393 to 3626 1 to 234       234/234
(100 %)
4 diff
(98.3 %id)
F27660 pectoral muscle (after mastectomy) .c 3403 to 3631 1 to 229       229/232
(98 %)
1 diff
(99.6 %id)
AW439053 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 3409 to 3807 398 to 1       398/398
(100 %)
2 diff
(99.5 %id)
F36093 pectoral muscle (after mastectomy) .c 3413 to 3628 1 to 216       216/216
(100 %)
1 diff
(99.6 %id)
BQ317995 colon .c 3417 to 3793 17 to 392       376/403
(93 %)
3 diff
(99.3 %id)
AI686163 Prostate .c 3423 to 3801 379 to 1       379/379
(100 %)
1 diff
(99.8 %id)
D31161   .c 3425 to 3725 1 to 301       301/301
(100 %)
2 diff
(99.4 %id)
D31031   .c 3426 to 3766 1 to 354       354/362
(97 %)
16 diff
(95.6 %id)
D31095   .c 3426 to 3777 1 to 352       352/352
(100 %)
0 diff
(100 %id)
D31309   .c 3426 to 3791 1 to 370       370/370
(100 %)
5 diff
(98.7 %id)
D31474   .c 3426 to 3710 1 to 287       287/296
(96 %)
2 diff
(99.4 %id)
BI838626 pooled pancreas and spleen .c 3428 to 3812 1 to 385       385/1142
(33 %)
6 diff
(99.5 %id)
BI838572 pooled pancreas and spleen .c 3428 to 3801 1 to 374   AAA   374/374
(100 %)
5 diff
(98.7 %id)
TI_57165127   .c 3428 to 3812 38 to 422       385/1179
(32 %)
6 diff
(99.5 %id)
TI_57165180   .c 3428 to 3801 31 to 404   AAA   374/404
(92 %)
6 diff
(98.6 %id)
AI291610 placenta .c 3430 to 3800 381 to 12   AAA   370/370
(100 %)
1 diff
(99.8 %id)
BU735041 eye, lens .c 3431 to 3806 395 to 19   AAA   377/377
(100 %)
7 diff
(98.2 %id)
AI866679 adenocarcinoma, Pancreas .c 3434 to 3806 400 to 28   AAA   373/373
(100 %)
3 diff
(99.2 %id)
BF588761 breast, lobullar carcinoma in situ .c 3442 to 3703 262 to 1       262/268
(97 %)
4 diff
(98.6 %id)
AA662158 normal prostate, Prostate .c 3452 to 3806 376 to 22   AAA   355/355
(100 %)
1 diff
(99.8 %id)
AA911580 lung, small cell carcinoma .c 3453 to 3804 354 to 2       353/354
(99 %)
0 diff
(100 %id)
AI302576 2 pooled tumors (clear cell type), Kidney .c 3460 to 3807 348 to 1       348/348
(100 %)
0 diff
(100 %id)
AA406478 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3466 to 3806 341 to 1   fully sequenced,   341/341
(100 %)
1 diff
(99.8 %id)
BU958018 mixed (pool of 40 RNAs) .c 3479 to 3829 1 to 351   tiling clone,   351/778
(45 %)
2 diff
(99.8 %id)
AW169600 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 3486 to 3806 321 to 1       321/321
(100 %)
4 diff
(98.8 %id)
FN130980 breast carcinoma .c 3495 to 3605 1 to 109       109/109
(100 %)
2 diff
(98.2 %id)
BU566085 mixed (pool of 40 RNAs) .c 3495 to 3806 1 to 313       313/832
(37 %)
2 diff
(99.8 %id)
AA905362 pooled .c 3518 to 3803 286 to 1       286/286
(100 %)
0 diff
(100 %id)
BQ188320 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 3519 to 3800 30 to 311   fully sequenced, AAA   282/311
(90 %)
0 diff
(100 %id)
BE327258 carcinoid, lung .c 3531 to 3779 1 to 249     Submitted on the opposite strand 249/249
(100 %)
0 diff
(100 %id)
C21179   .c 3538 to 3804 1 to 267       267/269
(99 %)
1 diff
(99.7 %id)
CK299807 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 3556 to 3800 263 to 19   fully sequenced, AAA   245/245
(100 %)
0 diff
(100 %id)
AI802608 colon, colonic mucosa from 5 ulcerative colitispatients .c 3581 to 3825 257 to 13       245/257
(95 %)
0 diff
(100 %id)
AA903918 carcinoid, lung .c 3594 to 3805 211 to 1       211/211
(100 %)
1 diff
(99.6 %id)
FN107796 breast carcinoma .c 3632 to 3723 1 to 91       91/96
(94 %)
2 diff
(98.0 %id)
AI688679 colon .c 3674 to 3808 135 to 1       135/135
(100 %)
0 diff
(100 %id)
AK301701 testis .d 1 to 1322 1 to 1322 exact tiling clone,   1322/1322
(100 %)
0 diff
(100 %id)
DC394613 testis .d 1 to 540 1 to 540       540/540
(100 %)
0 diff
(100 %id)
DA068572 cerebellum .e 1 to 562 5 to 566 exact tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
BG535481 lung .f 1 to 402 6 to 408 V34G H35S H36S G37W P38A ... tiling clone,   634/634
(100 %)
22 diff
(96.6 %id)
AK302911 testis .g 1 to 1227 5 to 1231 exact tiling clone,   1231/1231
(100 %)
1 diff
(100.0 %id)
DC403489 testis .g 1 to 581 5 to 585 exact     585/585
(100 %)
0 diff
(100 %id)
CA950152 Pancreas, Purified pancreatic islet .g 41 to 502 1 to 462       462/462
(100 %)
1 diff
(99.8 %id)
CA943930 Pancreas, Purified pancreatic islet .g 893 to 1383 491 to 1   tiling clone,   491/491
(100 %)
0 diff
(100 %id)
TI_149307754   .h 1 to 609 72 to 680 exact tiling clone, Submitted on the opposite strand 853/1070
(79 %)
17 diff
(98.5 %id)
BM979403 lung, Primary Lung Epithelial Cells .h 18 to 773 16 to 770 exact tiling clone, Submitted on the opposite strand 755/755
(100 %)
4 diff
(99.5 %id)
AA429798   .i 1 to 401 1 to 401 exact tiling clone,   401/401
(100 %)
3 diff
(99.3 %id)
AA452028   .i 2096 to 2554 465 to 6   tiling clone,   460/465
(98 %)
0 diff
(100 %id)
BJ998085 Wilms tumor .j 1 to 600 600 to 1   tiling clone, Submitted on the opposite strand 600/600
(100 %)
0 diff
(100 %id)
DA947412 Spleen .j 91 to 673 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA935065 Spleen .j 131 to 722 2 to 594 G53W T54D A55G S56V V57S capped   593/593
(100 %)
1 diff
(99.9 %id)
DA786774 brain .j 200 to 412 2 to 214   capped   213/219
(97 %)
1 diff
(99.6 %id)
DC418765 trachea .j 380 to 969 1 to 590 exact tiling clone,   590/590
(100 %)
2 diff
(99.7 %id)
AW365962 head_neck .k-u 1 to 553 12 to 563 E2N Q3R A4P M5* tiling clone,   552/640
(86 %)
15 diff
(97.7 %id)
AW365960 head_neck .k-u 7 to 636 1 to 626 Q25E A60V tiling clone,   626/638
(98 %)
25 diff
(96.1 %id)
AW387409 stomach .k-u 191 to 792 602 to 1 A4X tiling clone,   602/602
(100 %)
6 diff
(99.1 %id)
BF911840 uterus_tumor .k-u 480 to 684 215 to 8   tiling clone, Submitted on the opposite strand 208/215
(96 %)
0 diff
(100 %id)
BF912563 uterus_tumor .k-u 480 to 684 215 to 8     Submitted on the opposite strand 208/215
(96 %)
0 diff
(100 %id)
DB237564 trachea .l-u 1 to 568 2 to 570 exact tiling clone, capped   569/569
(100 %)
1 diff
(99.9 %id)
DB168650 kidney, tumor tissue .m 1 to 469 2 to 470 exact tiling clone, capped   469/469
(100 %)
0 diff
(100 %id)
BJ989864 hepatoblastoma Gene ARL1, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
BJ989865 hepatoblastoma Gene ARL1, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
CN402561 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 Gene ARL1, variant not shown         This clone was ignored    
AL550756 placenta, Placenta Cot 25-normalized Gene ARL1, variant not shown       fully sequenced, This clone was ignored    
AL574530 placenta, Placenta Cot 25-normalized Gene ARL1, variant not shown       fully sequenced, This clone was ignored    
DC369513   Gene ARL1, variant not shown         This clone was ignored    
CN373301 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells Gene ARL1, variant not shown         This clone was ignored    
AK299062   Gene ARL1, variant not shown         This clone was ignored    
BI459067 testis Gene ARL1, variant not shown         Suspected internal deletion, this clone was ignored    
BQ269765 Pancreas, Purified pancreatic islet Gene ARL1, variant not shown         This clone was ignored    
BQ286419 Pancreas, Purified pancreatic islet Gene ARL1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l-u, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI