To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene ARHGAP23TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
230 supporting clones for gene ARHGAP23 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CN282038 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1 to 472 1 to 472   tiling clone,   472/472
(100 %)
2 diff
(99.6 %id)
NM_020876.1   .a 3 to 6278 1 to 6276 exact RefSeq,   6276/6276
(100 %)
0 diff
(100 %id)
CR746382 Bone, osteosarcoma, cell line .a 257 to 724 12 to 479       468/479
(97 %)
6 diff
(98.8 %id)
BG112942 Bone, osteosarcoma, cell line .a 257 to 971 1 to 711       711/788
(90 %)
10 diff
(98.8 %id)
BQ718622 sympathetic trunk .a 443 to 1219 57 to 858   tiling clone,   802/1076
(74 %)
50 diff
(95.4 %id)
EG328516 pooled .a 564 to 849 286 to 1     Submitted on the opposite strand 286/286
(100 %)
12 diff
(95.9 %id)
EG328136 pooled .a 569 to 879 311 to 1     Submitted on the opposite strand 312/313
(99 %)
9 diff
(97.2 %id)
EG328307 pooled .a 640 to 1074 1 to 435   tiling clone,   435/435
(100 %)
0 diff
(100 %id)
EG328783 pooled .a 711 to 930 1 to 223       223/223
(100 %)
4 diff
(98.3 %id)
CV362260 nervous_tumor .a 737 to 1067 336 to 6     Submitted on the opposite strand 331/362
(91 %)
3 diff
(99.2 %id)
CV374268 placenta_normal .a 744 to 1105 382 to 21     Submitted on the opposite strand 362/382
(94 %)
0 diff
(100 %id)
BG392027 embryonal carcinoma, cell line, testis .a 816 to 1140 1 to 326       326/1018
(32 %)
6 diff
(99.5 %id)
CN429251 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1067 to 1710 1 to 644   tiling clone,   644/644
(100 %)
1 diff
(99.9 %id)
AI205039 schizophrenic brain S-11 frontal lobe .a 1265 to 1525 1 to 261     Submitted on the opposite strand 261/261
(100 %)
4 diff
(98.5 %id)
CN429246 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1592 to 2021 1 to 430   tiling clone,   430/430
(100 %)
1 diff
(99.8 %id)
BM544373 brain, hippocampus .a 1694 to 2635 13 to 970       958/1067
(89 %)
37 diff
(96.6 %id)
BM548592 brain, hippocampus .a 1849 to 2814 11 to 986   tiling clone,   976/1103
(88 %)
45 diff
(96.0 %id)
CN429252 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2004 to 2453 1 to 450       450/450
(100 %)
2 diff
(99.6 %id)
BQ723267 sympathetic trunk .a 2092 to 2679 1 to 598       598/932
(64 %)
22 diff
(97.7 %id)
CA488127   .a 2176 to 3024 1 to 849       849/880
(96 %)
18 diff
(98.0 %id)
BX377541 Placenta Cot 25-normalized .a 2267 to 3210 1 to 943       943/943
(100 %)
24 diff
(97.5 %id)
CN429250 embryonic stem cells, cell lines H1, H7, andH9 .a 2333 to 2686 1 to 353       353/353
(100 %)
1 diff
(99.8 %id)
CN429247 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2361 to 2956 1 to 595       595/595
(100 %)
3 diff
(99.5 %id)
BF036216 adenocarcinoma, ovary .a 2446 to 2912 1 to 470       469/470
(99 %)
12 diff
(97.5 %id)
BQ945740 epidermoid carcinoma, cell line, lung .a 2476 to 3231 1 to 772       768/911
(84 %)
33 diff
(96.4 %id)
BY795315 eye .a 2488 to 3076 13 to 601   tiling clone,   589/601
(98 %)
2 diff
(99.7 %id)
BU164735 eye, retinoblastoma .a 2498 to 3360 1 to 877       877/905
(96 %)
20 diff
(97.8 %id)
CN429245 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2582 to 2780 17 to 215       199/215
(92 %)
7 diff
(96.8 %id)
AI380817 B-cell, chronic lymphotic leukemia .a 2609 to 3057 449 to 1       449/449
(100 %)
2 diff
(99.6 %id)
BX281132 brain, medulla .a 2628 to 3146 1 to 519       519/519
(100 %)
1 diff
(99.9 %id)
BI828364 brain, medulla .a 2628 to 3428 1 to 800       800/800
(100 %)
9 diff
(98.9 %id)
TI_57175131   .a 2628 to 3428 72 to 871       800/871
(91 %)
15 diff
(98.3 %id)
BG819194 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2698 to 3415 1 to 715       715/717
(99 %)
9 diff
(98.8 %id)
CN429248 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2820 to 3477 1 to 658   tiling clone,   658/658
(100 %)
4 diff
(99.4 %id)
BG060099.
matches multiple genes
brain, glioblastoma without EGFR amplification .a 2840 to 3055 216 to 1   tiling clone, also hits gene LOC647224, skasmee 216/216
(100 %)
5 diff
(97.7 %id)
DN831436 pooled .a 2845 to 3466 623 to 1     Submitted on the opposite strand 623/623
(100 %)
4 diff
(99.4 %id)
DN831204 pooled .a 2848 to 3466 619 to 1     Submitted on the opposite strand 619/619
(100 %)
2 diff
(99.7 %id)
DN831435 pooled .a 2897 to 3499 1 to 603       603/603
(100 %)
2 diff
(99.7 %id)
BG290249 bladder, transitional cell papilloma, cell line .a 2927 to 3535 1 to 608       608/859
(70 %)
13 diff
(98.5 %id)
BF736312 bladder_tumor .a 2930 to 3418 498 to 11   tiling clone, Submitted on the opposite strand 488/568
(85 %)
1 diff
(99.9 %id)
BM544090 ovary (pool of 3) .a 2997 to 3830 26 to 860       835/1062
(78 %)
6 diff
(99.5 %id)
DN831203 pooled .a 3005 to 3260 1 to 248       248/248
(100 %)
8 diff
(96.8 %id)
BE701883 nervous_normal .a 3023 to 3442 1 to 420       420/425
(98 %)
13 diff
(97.0 %id)
BX369096 Placenta Cot 25-normalized .a 3041 to 3944 1 to 899       899/901
(99 %)
16 diff
(98.3 %id)
BE146157 head_neck .a 3132 to 3592 12 to 472       461/483
(95 %)
8 diff
(98.4 %id)
AW361488 colon .a 3133 to 3418 287 to 5       283/289
(97 %)
19 diff
(93.5 %id)
AW579571 head_neck .a 3133 to 3410 314 to 27       288/327
(88 %)
11 diff
(96.7 %id)
BE061591 breast .a 3133 to 3448 345 to 30     Submitted on the opposite strand 316/357
(88 %)
3 diff
(99.2 %id)
BE146033 head_neck .a 3133 to 3411 13 to 291       279/305
(91 %)
7 diff
(97.8 %id)
BE146165 head_neck .a 3133 to 3411 13 to 291       279/305
(91 %)
7 diff
(97.8 %id)
BE146167 head_neck .a 3133 to 3411 14 to 292       279/306
(91 %)
7 diff
(97.8 %id)
BE146174 head_neck .a 3133 to 3591 470 to 10     Submitted on the opposite strand 461/482
(95 %)
8 diff
(98.4 %id)
BE146218 head_neck .a 3133 to 3390 260 to 1     Submitted on the opposite strand 260/272
(95 %)
7 diff
(97.5 %id)
BE146305 head_neck .a 3133 to 3375 264 to 22     Submitted on the opposite strand 243/276
(88 %)
0 diff
(100 %id)
BE146314 head_neck .a 3133 to 3410 286 to 8     Submitted on the opposite strand 279/295
(94 %)
0 diff
(100 %id)
BE146371 head_neck .a 3133 to 3576 446 to 6     Submitted on the opposite strand 441/458
(96 %)
4 diff
(99.2 %id)
BE706109.
matches multiple genes
head_neck .a 3133 to 3411 295 to 17   tiling clone, also hits gene IGHV3OR16-6 279/324
(86 %)
2 diff
(99.4 %id)
AW748319 breast .a 3135 to 3469 13 to 353       339/366
(92 %)
19 diff
(94.9 %id)
BE146026 head_neck .a 3135 to 3592 15 to 472       458/488
(93 %)
8 diff
(98.4 %id)
BE146172 head_neck .a 3135 to 3411 34 to 310       277/324
(85 %)
7 diff
(97.9 %id)
AW579543 head_neck .a 3138 to 3615 1 to 489       487/489
(99 %)
40 diff
(91.9 %id)
AW579528 head_neck .a 3161 to 3448 308 to 22       289/308
(93 %)
5 diff
(98.4 %id)
AW579535 head_neck .a 3193 to 3410 251 to 31       221/253
(87 %)
12 diff
(95.3 %id)
AW813266 stomach .a 3204 to 3448 258 to 22       240/258
(93 %)
6 diff
(97.7 %id)
AA984381 schizophrenic brain S-11 frontal lobe .a 3241 to 3589 350 to 1       350/350
(100 %)
2 diff
(99.5 %id)
BF349787 head_neck .a 3259 to 3358 1 to 100       100/100
(100 %)
4 diff
(96.0 %id)
AA478252 ovarian tumor, ovary .a 3286 to 3403 1 to 118       118/118
(100 %)
0 diff
(100 %id)
AI971376 pooled germ cell tumors .a 3288 to 4022 734 to 1       734/738
(99 %)
5 diff
(99.4 %id)
AI971411 pooled germ cell tumors .a 3290 to 4022 732 to 1   tiling clone,   732/732
(100 %)
10 diff
(98.7 %id)
AI131432 heart .a 3297 to 4004 708 to 1       708/709
(99 %)
11 diff
(98.5 %id)
BE812911 amnion_normal .a 3302 to 3508 209 to 6       204/209
(97 %)
1 diff
(99.6 %id)
BE812946 amnion_normal .a 3302 to 3510 4 to 210       207/210
(98 %)
7 diff
(96.7 %id)
CR739980 brain .a 3317 to 3492 1 to 176       176/176
(100 %)
5 diff
(97.2 %id)
AA022764 heart .a 3339 to 3694 1 to 355   fully sequenced,   357/357
(100 %)
8 diff
(97.8 %id)
CN429249 embryonic stem cells, cell lines H1, H7, andH9 .a 3367 to 3942 11 to 587       577/587
(98 %)
7 diff
(98.9 %id)
BF940728 fibrotheoma, ovary .a 3369 to 4022 654 to 1       654/706
(92 %)
8 diff
(98.9 %id)
AI651565 Kidney .a 3398 to 4022 624 to 1       624/624
(100 %)
5 diff
(99.2 %id)
AA485673 ovarian tumor, ovary .a 3473 to 4022 551 to 1       551/551
(100 %)
9 diff
(98.4 %id)
BF195181 brain, glioblastoma (pooled) .a 3488 to 4022 535 to 1       535/535
(100 %)
2 diff
(99.7 %id)
AI659967 thymus, pooled .a 3505 to 4022 517 to 1       517/517
(100 %)
4 diff
(99.3 %id)
AI336895 lung .a 3515 to 3991 477 to 1       477/477
(100 %)
0 diff
(100 %id)
AI990062 pooled germ cell tumors .a 3531 to 3669 147 to 9       139/163
(85 %)
5 diff
(97.0 %id)
AW058446 Kidney .a 3540 to 4004 466 to 1       466/469
(99 %)
1 diff
(99.8 %id)
AA478253 ovarian tumor, ovary .a 3545 to 3704 160 to 1       160/160
(100 %)
0 diff
(100 %id)
CN484023 eye .a 3546 to 4014 1 to 469       469/469
(100 %)
0 diff
(100 %id)
AW297528   .a 3575 to 4021 447 to 1       447/447
(100 %)
0 diff
(100 %id)
BM804823 ovary (pool of 3) .a 3576 to 4014 1 to 439       439/439
(100 %)
0 diff
(100 %id)
AA507005 breast .a 3608 to 3891 442 to 155       288/442
(65 %)
10 diff
(97.8 %id)
BF940321 fibrotheoma, ovary .a 3638 to 4022 385 to 1       385/385
(100 %)
1 diff
(99.8 %id)
AA022664 heart .a 3664 to 4022 364 to 1   fully sequenced,   364/364
(100 %)
8 diff
(97.9 %id)
BM549858 astrocytoma grade IV, cell line, brain .a 3923 to 4580 23 to 680   tiling clone,   658/1039
(63 %)
26 diff
(97.5 %id)
AI253093 Kidney .a 4189 to 4484 296 to 1   tiling clone,   296/296
(100 %)
1 diff
(99.7 %id)
AI584089 adenocarcinoma, Pancreas .a 4548 to 5000 1 to 453   tiling clone, Submitted on the opposite strand 453/453
(100 %)
2 diff
(99.6 %id)
AA054953 heart .a 4549 to 4865 1 to 309     Submitted on the opposite strand 309/318
(97 %)
4 diff
(98.8 %id)
AI123323 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4549 to 5058 1 to 510     Submitted on the opposite strand 510/510
(100 %)
0 diff
(100 %id)
AI127086 heart .a 4549 to 5035 1 to 487     Submitted on the opposite strand 487/487
(100 %)
1 diff
(99.8 %id)
AI160612 placenta .a 4549 to 4955 1 to 407     Submitted on the opposite strand 407/407
(100 %)
1 diff
(99.8 %id)
AI436239 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4549 to 5047 1 to 499     Submitted on the opposite strand 499/499
(100 %)
0 diff
(100 %id)
AI924604 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 4549 to 5058 1 to 510     Submitted on the opposite strand 510/510
(100 %)
0 diff
(100 %id)
BF221645 pooled .a 4549 to 4980 1 to 432     Submitted on the opposite strand 432/432
(100 %)
2 diff
(99.6 %id)
TI_157602131   .a 4549 to 5063 81 to 599     Submitted on the opposite strand 519/1140
(45 %)
20 diff
(98.3 %id)
TI_157613592   .a 4549 to 5147 59 to 657     Submitted on the opposite strand 599/659
(90 %)
11 diff
(98.4 %id)
BF514614   .a 4550 to 4981 1 to 432     Submitted on the opposite strand 432/432
(100 %)
1 diff
(99.8 %id)
AI381233   .a 4584 to 4837 1 to 254     Submitted on the opposite strand 254/254
(100 %)
2 diff
(99.3 %id)
AI924149 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 4584 to 5058 1 to 475     Submitted on the opposite strand 475/475
(100 %)
0 diff
(100 %id)
H96351 placenta .a 4627 to 4928 1 to 304     Submitted on the opposite strand 304/304
(100 %)
9 diff
(97.1 %id)
BQ709351 Spleen .a 4770 to 5406 1 to 639   tiling clone,   639/998
(64 %)
16 diff
(98.4 %id)
BE515253 endometrium, adenocarcinoma cell line, uterus .a 4818 to 5410 52 to 640       589/908
(64 %)
24 diff
(97.4 %id)
BE764083 nervous_tumor .a 4884 to 5081 219 to 23       197/221
(89 %)
0 diff
(100 %id)
H45069 brain .a 4896 to 5127 235 to 3     Submitted on the opposite strand 233/235
(99 %)
0 diff
(100 %id)
BQ370898 placenta_normal .a 4974 to 5417 454 to 9       446/454
(98 %)
0 diff
(100 %id)
BI257739 cervical carcinoma cell line, cervix .a 4979 to 5414 1 to 435       435/819
(53 %)
5 diff
(99.4 %id)
BU180944 large cell carcinoma, lung .a 5008 to 5645 1 to 639       639/929
(68 %)
3 diff
(99.7 %id)
CD514413 White Matter .a 5008 to 5836 1 to 851   tiling clone,   851/873
(97 %)
46 diff
(94.8 %id)
N98984 multiple sclerosis lesions .a 5047 to 5242 196 to 1     Submitted on the opposite strand 196/196
(100 %)
0 diff
(100 %id)
BG386101 adenocarcinoma cell line, colon .a 5147 to 5994 1 to 846       846/962
(87 %)
48 diff
(95.1 %id)
AA055415 heart .a 5156 to 5587 441 to 1     Submitted on the opposite strand 441/441
(100 %)
12 diff
(97.3 %id)
AL550728 placenta, Placenta Cot 25-normalized .a 5161 to 6156 1 to 988       988/1024
(96 %)
11 diff
(99.0 %id)
BG681347 skin, squamous cell carcinoma .a 5227 to 5817 1 to 627       627/877
(71 %)
42 diff
(95.3 %id)
BG289759 bladder, transitional cell papilloma, cell line .a 5278 to 5912 1 to 636       636/767
(82 %)
7 diff
(99.1 %id)
BE698159 uterus_tumor .a 5287 to 5529 266 to 27       240/266
(90 %)
0 diff
(100 %id)
BI871670 adenocarcinoma, cell line, Liver .a 5290 to 6018 1 to 722       722/724
(99 %)
32 diff
(95.6 %id)
TI_57230810   .a 5290 to 6018 49 to 770       722/724
(99 %)
32 diff
(95.6 %id)
AW838921 leiomios .a 5297 to 5612 314 to 1       314/314
(100 %)
13 diff
(95.9 %id)
Z42677 brain, total brain .a 5344 to 5620 1 to 277       277/277
(100 %)
5 diff
(98.2 %id)
F12457 brain, total brain .a 5353 to 5650 1 to 298       298/301
(99 %)
2 diff
(99.4 %id)
H19194 brain .a 5353 to 5774 1 to 427       427/432
(98 %)
19 diff
(95.7 %id)
T74135 whole brain .a 5354 to 5731 1 to 374       374/374
(100 %)
8 diff
(97.9 %id)
R13349 whole brain .a 5354 to 5755 1 to 409       409/439
(93 %)
19 diff
(95.7 %id)
R21484 whole brain .a 5354 to 5696 1 to 344       344/344
(100 %)
7 diff
(98.0 %id)
BM726909 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5391 to 6004 1 to 615       615/615
(100 %)
1 diff
(99.9 %id)
CA943274 Pancreas, Purified pancreatic islet .a 5411 to 5757 1 to 347       347/347
(100 %)
0 diff
(100 %id)
BU186055 epidermoid carcinoma, cell line, salivary gland .a 5432 to 6085 1 to 666   AAA   666/666
(100 %)
16 diff
(97.6 %id)
BM804852 ovary (pool of 3) .a 5440 to 6274 1 to 837   tiling clone,   837/964
(86 %)
7 diff
(99.3 %id)
BE899033 adenocarcinoma cell line, ovary .a 5450 to 6239 1 to 780       780/912
(85 %)
25 diff
(97.3 %id)
AA625198 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 5468 to 6006 541 to 1     Submitted on the opposite strand 541/541
(100 %)
17 diff
(96.9 %id)
BF909166 uterus_tumor .a 5516 to 5675 162 to 6     Submitted on the opposite strand 157/162
(96 %)
0 diff
(100 %id)
AW889178 nervous_tumor .a 5517 to 5832 321 to 5       317/322
(98 %)
0 diff
(100 %id)
BG120848 adenocarcinoma, cell line, Liver .a 5530 to 6192 1 to 655       655/905
(72 %)
21 diff
(97.7 %id)
BE181109 head_neck .a 5586 to 5989 8 to 410       403/410
(98 %)
7 diff
(98.3 %id)
TI_154165042   .a 5589 to 6271 776 to 94     Submitted on the opposite strand 683/917
(74 %)
0 diff
(100 %id)
AI743042 pooled .a 5602 to 6087 489 to 3       487/489
(99 %)
0 diff
(100 %id)
DR159187 human embryonic stem cells differentiated toan early endodermal cell type .a 5612 to 6271 688 to 29     Submitted on the opposite strand 660/688
(95 %)
0 diff
(100 %id)
BE181067 head_neck .a 5613 to 5904 53 to 342       290/342
(84 %)
6 diff
(98.3 %id)
AA351347 brain .a 5656 to 5904 249 to 1     Submitted on the opposite strand 249/249
(100 %)
0 diff
(100 %id)
BF838736 head_neck .a 5657 to 5863 1 to 211       211/217
(97 %)
7 diff
(96.8 %id)
BM998907 lung, Lung Focal Fibrosis .a 5675 to 6269 1 to 595   AAA Submitted on the opposite strand 595/595
(100 %)
1 diff
(99.9 %id)
BM995552 lung, Metastatic Chondrosarcoma .a 5675 to 6269 1 to 595     Submitted on the opposite strand 595/595
(100 %)
5 diff
(99.2 %id)
BM990013 lung, Lung Focal Fibrosis .a 5676 to 6274 1 to 599   AAA Submitted on the opposite strand 599/599
(100 %)
2 diff
(99.7 %id)
CD676099 eye, lens .a 5683 to 6271 613 to 26     Submitted on the opposite strand 588/613
(95 %)
0 diff
(100 %id)
BG996376 head_neck .a 5694 to 5846 7 to 158       152/158
(96 %)
5 diff
(96.9 %id)
AI694815 carcinoid, lung .a 5694 to 6161 1 to 468     Submitted on the opposite strand 468/468
(100 %)
1 diff
(99.8 %id)
CV569671 cornea, eye .a 5705 to 6271 598 to 32     Submitted on the opposite strand 567/598
(94 %)
0 diff
(100 %id)
BM998407 lung, Metastatic Chondrosarcoma .a 5714 to 6084 389 to 19   AAA   371/371
(100 %)
4 diff
(99.0 %id)
AA374460 lung .a 5716 to 5974 1 to 259       259/259
(100 %)
0 diff
(100 %id)
AW966502   .a 5717 to 6269 1 to 553       553/637
(86 %)
2 diff
(99.7 %id)
AW966507   .a 5717 to 6269 1 to 552       552/556
(99 %)
5 diff
(99.2 %id)
BF919958 nervous_tumor .a 5718 to 6135 518 to 101     Submitted on the opposite strand 418/518
(80 %)
0 diff
(100 %id)
BQ009299 Chondrosarcoma, Left Pubic Bone .a 5719 to 6269 570 to 19   AAA   552/552
(100 %)
2 diff
(99.7 %id)
BQ356311 head_neck .a 5724 to 6032 309 to 1       309/309
(100 %)
5 diff
(98.4 %id)
CF136146 lymph .a 5729 to 6271 569 to 25     Submitted on the opposite strand 545/569
(95 %)
0 diff
(100 %id)
BI083911 epidermoid carcinoma, cell line, salivary gland .a 5749 to 6282 1 to 534   fully sequenced,   534/534
(100 %)
6 diff
(98.9 %id)
BQ671187 epidermoid carcinoma, cell line, salivary gland .a 5751 to 6274 1 to 523   AAA   523/523
(100 %)
1 diff
(99.9 %id)
CA425628 cell lines, Chondrosarcoma .a 5764 to 6269 525 to 19   AAA   507/507
(100 %)
2 diff
(99.7 %id)
BQ004533 Chondrosarcoma, Left Pelvis .a 5795 to 6269 494 to 19   AAA   476/476
(100 %)
2 diff
(99.6 %id)
BG403058 bladder, transitional cell papilloma, cell line .a 5805 to 6272 1 to 467   AAA   467/467
(100 %)
1 diff
(99.8 %id)
BF195364 carcinoid, lung .a 5826 to 6271 452 to 7       446/452
(98 %)
0 diff
(100 %id)
BI010461 lung_normal .a 5855 to 6116 262 to 1       262/265
(98 %)
0 diff
(100 %id)
BY799311 eye .a 5855 to 6269 459 to 45     Submitted on the opposite strand 415/459
(90 %)
0 diff
(100 %id)
R56748 whole brain .a 5857 to 5989 133 to 1     Submitted on the opposite strand 133/133
(100 %)
0 diff
(100 %id)
AI911167 pooled .a 5872 to 6273 416 to 15   AAA   402/402
(100 %)
6 diff
(98.6 %id)
CA943399 Pancreas, Purified pancreatic islet .a 5887 to 6270 384 to 1       384/384
(100 %)
1 diff
(99.8 %id)
BE064703 breast .a 5895 to 6124 232 to 2     Submitted on the opposite strand 231/241
(95 %)
0 diff
(100 %id)
BE064712 breast .a 5895 to 6130 237 to 4     Submitted on the opposite strand 234/245
(95 %)
0 diff
(100 %id)
BE064846 breast .a 5895 to 6127 251 to 17     Submitted on the opposite strand 235/262
(89 %)
0 diff
(100 %id)
BE064946 breast .a 5895 to 6132 262 to 26     Submitted on the opposite strand 237/271
(87 %)
0 diff
(100 %id)
AW601290 breast .a 5896 to 6107 220 to 9       212/231
(91 %)
0 diff
(100 %id)
H18528 brain .a 5904 to 6276 379 to 1       379/388
(97 %)
7 diff
(98.2 %id)
T82475 whole brain .a 5905 to 6278 388 to 8       381/388
(98 %)
0 diff
(100 %id)
R42869 whole brain .a 5911 to 6278 381 to 8   tiling clone,   374/381
(98 %)
0 diff
(100 %id)
R51593 whole brain .a 5914 to 6278 369 to 1       369/379
(97 %)
11 diff
(97.1 %id)
AW102728 pooled .a 5924 to 6271 351 to 3       349/351
(99 %)
0 diff
(100 %id)
AI243766 pooled .a 5931 to 6269 351 to 13   AAA   339/339
(100 %)
2 diff
(99.5 %id)
AB076968 breast, vestibule .a 5980 to 6269 1 to 290   AAA   290/290
(100 %)
0 diff
(100 %id)
BI084580 epidermoid carcinoma, cell line, salivary gland .a 5983 to 6227 245 to 1   fully sequenced,   245/245
(100 %)
8 diff
(96.8 %id)
BM669761 eye, fetal eyes .a 5988 to 6277 313 to 24   AAA   290/290
(100 %)
2 diff
(99.4 %id)
BM990650 lung, Lung Focal Fibrosis .a 5995 to 6269 293 to 19   AAA   275/281
(97 %)
2 diff
(99.3 %id)
BU429941 lymph .a 6016 to 6271 296 to 41     Submitted on the opposite strand 256/296
(86 %)
0 diff
(100 %id)
AA912360 Dorsal root ganglion, peripheral nervous system .a 6021 to 6275 256 to 2       255/256
(99 %)
0 diff
(100 %id)
AI262729 placenta .a 6030 to 6271 249 to 8       242/249
(97 %)
0 diff
(100 %id)
F10078 brain, total brain .a 6031 to 6277 247 to 1       247/247
(100 %)
0 diff
(100 %id)
AA670423 whole brain .a 6031 to 6275 248 to 4       245/248
(98 %)
0 diff
(100 %id)
BQ027932 mixed .a 6036 to 6274 257 to 19   AAA   239/239
(100 %)
0 diff
(100 %id)
BX954038   .a 6047 to 6269 1 to 224   AAA   224/224
(100 %)
5 diff
(97.8 %id)
BG898102 cartilage .a 6077 to 6269 85 to 277   AAA   193/209
(92 %)
0 diff
(100 %id)
BM993990 lung, Metastatic Chondrosarcoma .a 6083 to 6269 205 to 19   AAA   187/187
(100 %)
1 diff
(99.5 %id)
Z38842 brain, total brain .a 6094 to 6277 185 to 1       185/185
(100 %)
1 diff
(99.5 %id)
GD146986   .a 6152 to 6269 1 to 118   AAA   118/118
(100 %)
2 diff
(98.4 %id)
GD160710   .a 6152 to 6271 1 to 121       121/143
(84 %)
6 diff
(95.9 %id)
GD160714   .a 6152 to 6271 1 to 122       122/151
(80 %)
5 diff
(96.7 %id)
AB040934   .b 1 to 2436 1 to 2436 exact tiling clone, available from KIAA,   2436/2436
(100 %)
2 diff
(100.0 %id)
BC039190 Brain, anaplastic oligodendroglioma with1p/19q loss .b 491 to 2436 1 to 1946   available from MGC,   1946/1946
(100 %)
2 diff
(99.9 %id)
H20358 brain .b 1709 to 2137 1 to 430   fully sequenced,   432/432
(100 %)
17 diff
(96.1 %id)
AI932367 pooled .b 1759 to 2393 633 to 1       633/717
(88 %)
17 diff
(97.7 %id)
H18339 brain .b 2092 to 2387 296 to 1       296/400
(74 %)
1 diff
(99.8 %id)
H20169 brain .b 2107 to 2362 256 to 1   fully sequenced,   256/256
(100 %)
1 diff
(99.7 %id)
BF528965 anaplastic oligodendroglioma with 1p/19qloss, brain .b 2155 to 2426 11 to 281       271/281
(96 %)
6 diff
(97.9 %id)
BF370340 prostate_normal .c 1 to 484 509 to 26   tiling clone,   484/516
(93 %)
5 diff
(99.1 %id)
BF370339 prostate_normal .c 2 to 452 487 to 36       452/488
(92 %)
9 diff
(98.2 %id)
BF370346 prostate_normal .c 2 to 488 498 to 14   tiling clone,   485/499
(97 %)
8 diff
(98.4 %id)
BF370354 prostate_normal .c 2 to 494 501 to 12       490/502
(97 %)
16 diff
(96.9 %id)
BF370348 prostate_normal .c 3 to 472 471 to 1   tiling clone,   471/471
(100 %)
9 diff
(98.1 %id)
BE146042 head_neck .c 452 to 890 439 to 4   tiling clone, Submitted on the opposite strand 436/442
(98 %)
1 diff
(99.8 %id)
BE146103 head_neck .c 452 to 889 465 to 14   tiling clone, Submitted on the opposite strand 452/477
(94 %)
20 diff
(95.9 %id)
BE146297 head_neck .c 452 to 843 461 to 68   tiling clone, Submitted on the opposite strand 394/468
(84 %)
0 diff
(100 %id)
BE146328 head_neck .c 452 to 889 495 to 51     Submitted on the opposite strand 445/507
(87 %)
8 diff
(98.5 %id)
BF366866 nervous_tumor .d 1 to 407 11 to 416   tiling clone,   407/425
(95 %)
12 diff
(97.2 %id)
AW651801   .d 229 to 761 1 to 533   tiling clone,   533/533
(100 %)
2 diff
(99.7 %id)
AI698700 pooled .d 1045 to 1377 1 to 333   tiling clone, Submitted on the opposite strand 333/333
(100 %)
1 diff
(99.7 %id)
AW675397   .d 1214 to 1411 240 to 37   AAA   204/216
(94 %)
11 diff
(95.0 %id)
BE708894 head_neck .d 1283 to 1563 10 to 289   tiling clone,   280/343
(81 %)
7 diff
(98.0 %id)
CB989904 Human Placenta, placenta .e 1 to 608 28 to 645 T172K L175A Y176V K177T S178K ... tiling clone,   618/818
(75 %)
33 diff
(96.0 %id)
BM806021 brain, hippocampus .f 1 to 494 74 to 570 A8V K134E T135H Y136L S137L ... tiling clone,   497/1496
(33 %)
16 diff
(99.0 %id)
BM545301 brain, hippocampus .f 12 to 431 12 to 435   tiling clone,   424/1147
(36 %)
9 diff
(99.3 %id)
BX282006 pooled brain, lung, testis .g 1 to 502 26 to 527 exact tiling clone,   502/527
(95 %)
7 diff
(98.7 %id)
TI_57200198   .g 1 to 874 70 to 946 A123G A124C A125G A126G G127R ...     877/948
(92 %)
29 diff
(97.0 %id)
BI819338 pooled brain, lung, testis .g 2 to 874 1 to 876   tiling clone,   876/878
(99 %)
23 diff
(97.4 %id)
CN429253 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .g 248 to 695 1 to 448   tiling clone,   448/448
(100 %)
1 diff
(99.8 %id)
EG328308 pooled .h 1 to 440 439 to 1 S123R D124T tiling clone, Submitted on the opposite strand 439/439
(100 %)
1 diff
(99.8 %id)
AW148674 brain, tumor, 5 pooled (see description) .i-u 1 to 449 452 to 4 P31H tiling clone,   449/452
(99 %)
0 diff
(100 %id)
DR008189 pooled .j 1 to 405 1 to 405 E24Q N27I A78G tiling clone,   405/405
(100 %)
11 diff
(97.3 %id)
TI_837040769   .j 24 to 1000 984 to 10   tiling clone,   975/986
(98 %)
21 diff
(97.9 %id)
DR008190 pooled .j 274 to 986 713 to 1   tiling clone, Submitted on the opposite strand 713/713
(100 %)
7 diff
(99.1 %id)
BQ081978 Ascites, stomach .j 928 to 1481 1 to 553   tiling clone,   553/553
(100 %)
3 diff
(99.5 %id)
BG434694 placenta .k 1 to 659 1 to 663 exact tiling clone,   663/663
(100 %)
6 diff
(99.1 %id)
BF732437 fibrotheoma, ovary .l 1 to 471 471 to 1 F37L tiling clone,   471/471
(100 %)
1 diff
(99.8 %id)
BE927729 colon .m-u 1 to 150 9 to 159 S9V F10L F11L R12P L14A ... tiling clone,   151/159
(94 %)
6 diff
(96.3 %id)
BE146025 head_neck Gene ARHGAP23, variant not shown         This clone was ignored    
BF846099 lung_normal Gene ARHGAP23, variant not shown         Submitted on the opposite strand    
AI220530   Gene ARHGAP23, variant not shown         This clone was ignored    
AI500232 anaplastic oligodendroglioma, brain Gene ARHGAP23, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u, .j, .k, .l, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI