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Gene ANKRD22TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
75 supporting clones for gene ANKRD22 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BP192719 brain .a 1 to 565 2 to 565       565/565
(100 %)
3 diff
(99.5 %id)
NM_144590.2   .a 1 to 3980 2 to 3981 exact RefSeq, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 3981/3981
(100 %)
0 diff
(100 %id)
DA672161   .a 1 to 568 2 to 569   tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
DT217104 brain .a 3 to 671 1 to 669       669/669
(100 %)
0 diff
(100 %id)
AX721211   .a 56 to 1235 1 to 1180 exact     1180/1184
(99 %)
2 diff
(99.9 %id)
BP219208 caudate nucleus .a 60 to 641 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP193355 brain .a 80 to 662 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BM785517 stomach .a 157 to 827 1 to 671       671/671
(100 %)
0 diff
(100 %id)
BP342197 stomach mucosa .a 157 to 739 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BG539351 lung .a 185 to 872 1 to 706       706/928
(76 %)
34 diff
(96.4 %id)
CD706483 normal nasopharynx .a 192 to 731 23 to 559       537/562
(95 %)
12 diff
(97.9 %id)
DA450949 tongue, tumor tissue .a 202 to 757 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
BM837388 Ascites, stomach .a 202 to 833 1 to 632       632/632
(100 %)
2 diff
(99.7 %id)
BC021671 Bladder, carcinoma .a 216 to 1315 4 to 1103 Y79H tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 1100/1102
(99 %)
4 diff
(99.7 %id)
BP343758 stomach mucosa .a 217 to 801 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
BG328011 adenocarcinoma cell line, colon .a 226 to 959 1 to 653 R54S I55N V56R S57F F58L ...     615/1167
(52 %)
28 diff
(97.7 %id)
AK313969 liver, tumor tissue .a 228 to 943 1 to 716 exact     716/716
(100 %)
0 diff
(100 %id)
DB186692 liver, tumor tissue .a 229 to 791 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BU932881 mixed (pool of 40 RNAs) .a 230 to 959 1 to 734 E115D E156A A157S K164*     734/828
(88 %)
21 diff
(97.5 %id)
DA042115 bladder .a 235 to 807 2 to 574   capped   573/576
(99 %)
4 diff
(99.4 %id)
BE566554 bladder, carcinoma, cell line .a 237 to 863 1 to 625       625/817
(76 %)
25 diff
(97.0 %id)
CB128220 Liver .a 239 to 532 1 to 295       295/295
(100 %)
2 diff
(99.4 %id)
AA295175 Pancreas .a 261 to 606 1 to 347       347/347
(100 %)
6 diff
(98.3 %id)
CD693721 normal nasopharynx .a 319 to 671 23 to 375       353/375
(94 %)
6 diff
(98.4 %id)
CD707983 normal nasopharynx .a 319 to 728 23 to 432       410/432
(94 %)
8 diff
(98.2 %id)
TI_1948084394   .a 366 to 678 130 to 442   fully sequenced,   313/442
(70 %)
7 diff
(98.5 %id)
TI_1948084670   .a 366 to 797 129 to 560   fully sequenced,   432/560
(77 %)
8 diff
(98.6 %id)
CV028817 mixed .a 368 to 942 1 to 575       575/613
(93 %)
3 diff
(99.6 %id)
TI_1948083859   .a 388 to 719 149 to 481   fully sequenced,   333/481
(69 %)
9 diff
(98.2 %id)
BF326749 breast_normal .a 465 to 952 1 to 488   tiling clone,   488/490
(99 %)
2 diff
(99.6 %id)
BE080192 breast .a 467 to 835 387 to 21     Submitted on the opposite strand 367/387
(94 %)
1 diff
(99.8 %id)
BQ310219 breast .a 467 to 833 377 to 10       368/377
(97 %)
1 diff
(99.8 %id)
BE080255 breast .a 490 to 838 354 to 7     Submitted on the opposite strand 348/354
(98 %)
3 diff
(99.2 %id)
AA306997 colon .a 534 to 969 1 to 443       443/443
(100 %)
9 diff
(98.0 %id)
TI_1948084128   .a 565 to 942 508 to 131       378/406
(93 %)
2 diff
(99.6 %id)
BF336432 colon .a 581 to 845 1 to 268       268/268
(100 %)
15 diff
(94.5 %id)
BQ358689 head_neck .a 627 to 1128 490 to 1       490/490
(100 %)
19 diff
(96.2 %id)
TI_1948084395   .a 648 to 942 424 to 130   fully sequenced,   295/322
(91 %)
1 diff
(99.7 %id)
TI_1948083860   .a 658 to 942 413 to 129   fully sequenced,   285/313
(91 %)
1 diff
(99.7 %id)
AA775676 heart .a 721 to 1124 404 to 1       404/404
(100 %)
1 diff
(99.8 %id)
TI_1948084671   .a 736 to 942 335 to 129   fully sequenced,   207/234
(88 %)
1 diff
(99.6 %id)
DB314215 tongue, tumor tissue .a 3456 to 3986 532 to 1   tiling clone,   532/532
(100 %)
1 diff
(99.9 %id)
AW869573 stomach_normal .b 1 to 460 478 to 10 N52Y tiling clone,   464/481
(96 %)
5 diff
(99.0 %id)
AW299505 Kidney .b 141 to 704 564 to 1   tiling clone,   564/564
(100 %)
10 diff
(98.3 %id)
BE841230 stomach_normal .b 168 to 500 1 to 334   tiling clone,   334/334
(100 %)
1 diff
(99.8 %id)
AI660377 thymus, pooled .b 266 to 688 447 to 25   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 423/423
(100 %)
1 diff
(99.8 %id)
BQ327249 colon_normal .b 267 to 614 11 to 351       341/351
(97 %)
6 diff
(98.3 %id)
AI698467 pooled .b 359 to 688 361 to 32   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 330/330
(100 %)
7 diff
(97.9 %id)
BU596895 mixed (pool of 40 RNAs) .b 359 to 710 1 to 352   tiling clone,   352/365
(96 %)
2 diff
(99.5 %id)
AA932068 carcinoid, lung .b 532 to 937 1 to 414   tiling clone, Submitted on the opposite strand 414/414
(100 %)
3 diff
(99.3 %id)
AI651205 pooled germ cell tumors .b 540 to 700 161 to 1       161/161
(100 %)
0 diff
(100 %id)
AA976927 pooled germ cell tumors .b 541 to 700 160 to 1       160/160
(100 %)
0 diff
(100 %id)
AI242329 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 640 to 1003 373 to 1       373/373
(100 %)
5 diff
(98.7 %id)
AW001485 colon, colonic mucosa from 3 patients with Crohn'sdisease .b 658 to 908 265 to 14   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 252/252
(100 %)
7 diff
(97.3 %id)
TI_154004631   .b 683 to 908 335 to 561     Submitted on the opposite strand 227/357
(63 %)
0 diff
(100 %id)
AA516371 colon .b 689 to 912 229 to 1       229/258
(88 %)
6 diff
(97.7 %id)
AI097229 heart .b 689 to 1004 318 to 3   tiling clone,   316/342
(92 %)
0 diff
(100 %id)
AI242439 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 689 to 1003 322 to 1       322/325
(99 %)
7 diff
(97.9 %id)
AA523948 colon .b 692 to 912 221 to 1       363/414
(87 %)
11 diff
(97.4 %id)
CR746079 normal prostate, Prostate .b 715 to 1090 1 to 376   tiling clone,   376/382
(98 %)
1 diff
(99.8 %id)
AW196074 adenocarcinoma, Pancreas .b 779 to 908 150 to 21   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 130/130
(100 %)
2 diff
(98.5 %id)
BQ380527 uterus_tumor .b 824 to 1123 322 to 23   tiling clone,   300/322
(93 %)
0 diff
(100 %id)
FN063640 breast carcinoma .b 963 to 1044 1 to 82       82/82
(100 %)
4 diff
(95.2 %id)
BQ007379 placenta .b 1230 to 1618 13 to 401   tiling clone, AAA Submitted on the opposite strand 389/401
(97 %)
6 diff
(98.6 %id)
BF763406 colon_est .b 1252 to 1669 445 to 27     Submitted on the opposite strand 419/445
(94 %)
0 diff
(100 %id)
D20012   .b 1327 to 1843 1 to 504     Submitted on the opposite strand 504/553
(91 %)
24 diff
(95.7 %id)
CV309525 breast .b 1375 to 1575 1 to 209       209/209
(100 %)
14 diff
(93.4 %id)
AA662744 normal prostate, Prostate .b 1530 to 1906 377 to 1   tiling clone,   377/377
(100 %)
0 diff
(100 %id)
BF511085   .b 1635 to 1907 290 to 18   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 273/273
(100 %)
0 diff
(100 %id)
FN103565 breast carcinoma .b 1699 to 1817 114 to 1     Submitted on the opposite strand 114/114
(100 %)
7 diff
(93.9 %id)
BM850537 stomach .b 1813 to 1913 1 to 102   tiling clone, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 102/102
(100 %)
1 diff
(99.1 %id)
BG743024 skin .b 2097 to 2725 1 to 629   tiling clone,   629/629
(100 %)
0 diff
(100 %id)
W21545 lung .b 2171 to 2378 1 to 208     Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 208/208
(100 %)
1 diff
(99.6 %id)
BX103621 lung .b 2172 to 2724 1 to 554       554/556
(99 %)
2 diff
(99.7 %id)
BE183372 head_neck .b 2509 to 2650 1 to 142       142/142
(100 %)
3 diff
(97.9 %id)
AA532855 colon .b 2849 to 3357 502 to 1   tiling clone,   502/522
(96 %)
19 diff
(96.4 %id)
N95187 lung .b 2952 to 3351 407 to 13   tiling clone, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 395/456
(86 %)
7 diff
(98.5 %id)
AI640472 Kidney .b 2990 to 3357 370 to 1       370/423
(87 %)
6 diff
(98.6 %id)
AI860145 Kidney .b 3063 to 3357 307 to 13   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 295/295
(100 %)
1 diff
(99.7 %id)
AA622980 breast .b 3218 to 3352 135 to 1       135/135
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C