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Gene ANKRD13ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
401 supporting clones for gene ANKRD13A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK302535 testis .a 1 to 1905 1 to 1905 E610G tiling clone,   1905/1905
(100 %)
1 diff
(100.0 %id)
CX758472 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 540 to 1283 1 to 744     Submitted on the opposite strand 744/744
(100 %)
5 diff
(99.4 %id)
BM543839 ovary (pool of 3) .a 652 to 1607 1 to 977       976/1104
(88 %)
51 diff
(95.4 %id)
BM476926 leiomyosarcoma, uterus .a 808 to 1862 1 to 1060   tiling clone,   1063/1068
(99 %)
66 diff
(93.9 %id)
DA655755   .a 822 to 1384 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DB075735 testis .b 1 to 272 2 to 273   tiling clone, capped   272/272
(100 %)
0 diff
(100 %id)
CD109650 Human Placenta, placenta .b 31 to 774 19 to 765   available from MGC,   747/765
(97 %)
12 diff
(98.5 %id)
BG724121 testis .b 38 to 394 1 to 360       360/363
(99 %)
9 diff
(97.6 %id)
BM149107 leukopheresis .b 39 to 394 1 to 356       356/360
(98 %)
11 diff
(97.0 %id)
AU098647   .b 40 to 339 1 to 300       300/300
(100 %)
4 diff
(98.7 %id)
NM_033121.1   .b 40 to 3945 1 to 3906 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 3906/3906
(100 %)
0 diff
(100 %id)
DB153355 thymus .b 41 to 631 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DB282881 uterus .b 41 to 271 2 to 232   capped   231/231
(100 %)
1 diff
(99.6 %id)
BU429954 lymph .b 46 to 451 1 to 406       406/406
(100 %)
5 diff
(98.8 %id)
DB457479.
matches multiple genes
testis .b 47 to 508 1 to 462     also hits gene sanimi 462/462
(100 %)
1 diff
(99.8 %id)
DA659301   .b 48 to 270 2 to 225   capped   224/224
(100 %)
1 diff
(99.6 %id)
DA116256 cerebellum .b 49 to 628 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
BQ223645 melanotic melanoma, skin .b 51 to 841 1 to 795       795/886
(89 %)
6 diff
(99.4 %id)
DR005143 Prostate .b 52 to 729 8 to 685       678/685
(98 %)
9 diff
(98.7 %id)
TI_154151300   .b 52 to 653 80 to 682       603/681
(88 %)
25 diff
(96.4 %id)
DR006599 Spleen .b 54 to 685 8 to 639       632/639
(98 %)
9 diff
(98.6 %id)
BQ049442 lymph, lymphoma, cell line .b 56 to 846 1 to 808       808/1005
(80 %)
30 diff
(97.1 %id)
DB083095 testis .b 56 to 511 2 to 457   capped   456/456
(100 %)
2 diff
(99.6 %id)
BI458095 brain, hypothalamus .b 59 to 775 6 to 723       718/727
(98 %)
13 diff
(98.3 %id)
AW499799 lymph .b 62 to 562 8 to 508       501/508
(98 %)
7 diff
(98.7 %id)
AW502926 lymph .b 62 to 394 8 to 341       334/344
(97 %)
3 diff
(99.2 %id)
CF121580 lymph .b 62 to 742 8 to 686       679/686
(98 %)
7 diff
(99.0 %id)
TI_154153781   .b 62 to 706 79 to 723       645/652
(98 %)
14 diff
(97.9 %id)
TI_154180743   .b 62 to 907 76 to 913       838/838
(100 %)
19 diff
(97.8 %id)
BU430706 lymph .b 64 to 401 1 to 338       338/342
(98 %)
11 diff
(96.8 %id)
BI715289 Pancreas, Purified pancreatic islet .b 65 to 682 1 to 618       618/618
(100 %)
7 diff
(98.9 %id)
DB461914.
matches multiple genes
testis .b 65 to 537 1 to 473     also hits gene sanimi 473/473
(100 %)
1 diff
(99.8 %id)
AL560279 B cells (Ramos cell line), B cells from Burkitt lymphoma .b 70 to 996 1 to 919       919/934
(98 %)
16 diff
(98.3 %id)
TI_154152210   .b 71 to 527 87 to 543       457/556
(82 %)
10 diff
(98.3 %id)
AW504463 lymph .b 76 to 267 8 to 199       192/214
(89 %)
12 diff
(94.4 %id)
AW500648 lymph .b 80 to 225 8 to 153       146/154
(94 %)
7 diff
(95.5 %id)
CN298918 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 109 to 538 1 to 430       430/430
(100 %)
0 diff
(100 %id)
AA306072   .b 133 to 554 1 to 421       421/421
(100 %)
1 diff
(99.8 %id)
AF064604 blood .b 133 to 1384 1 to 1256       1256/1267
(99 %)
14 diff
(98.9 %id)
BI462806 testis .b 151 to 805 9 to 666       658/671
(98 %)
26 diff
(96.2 %id)
DB461524.
matches multiple genes
testis .b 158 to 653 1 to 497     also hits gene sanimi 497/504
(98 %)
4 diff
(99.3 %id)
DB061694 testis .b 160 to 732 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB454666.
matches multiple genes
testis .b 162 to 639 1 to 478     also hits gene sanimi 478/478
(100 %)
0 diff
(100 %id)
BI461495 testis .b 162 to 887 1 to 728       728/728
(100 %)
9 diff
(98.8 %id)
BI461091 testis .b 162 to 777 1 to 617       617/617
(100 %)
5 diff
(99.2 %id)
DB065235 testis .b 182 to 715 2 to 538   capped   537/537
(100 %)
3 diff
(99.5 %id)
DB089635 testis .b 182 to 747 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DB233653 trachea .b 184 to 764 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DB477246.
matches multiple genes
hippocampus .b 186 to 685 1 to 500     also hits gene sanimi 500/500
(100 %)
2 diff
(99.6 %id)
BG723656 testis .b 194 to 699 1 to 508       508/597
(85 %)
12 diff
(98.0 %id)
BI460323 testis .b 196 to 920 1 to 727       725/728
(99 %)
15 diff
(98.0 %id)
BC032833 testis .b 199 to 3945 1 to 3747 D296G tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 3747/3747
(100 %)
2 diff
(100.0 %id)
DC400961 testis .b 199 to 723 1 to 525       525/525
(100 %)
0 diff
(100 %id)
DB073396 testis .b 200 to 741 2 to 544   capped   543/546
(99 %)
2 diff
(99.7 %id)
DB445398.
matches multiple genes
testis .b 201 to 626 1 to 425     also hits gene sanimi 425/425
(100 %)
10 diff
(97.7 %id)
DB453670.
matches multiple genes
testis .b 201 to 695 1 to 495     also hits gene sanimi 495/495
(100 %)
0 diff
(100 %id)
DB454850.
matches multiple genes
testis .b 201 to 670 1 to 470     also hits gene sanimi 470/470
(100 %)
0 diff
(100 %id)
EL593991 epidermis, skin .b 292 to 1030 24 to 757       734/759
(96 %)
14 diff
(98.2 %id)
EL593997 epidermis, skin .b 292 to 1030 24 to 761       738/761
(96 %)
19 diff
(97.6 %id)
TI_1948230548   .b 298 to 1027 134 to 870       737/1254
(58 %)
29 diff
(97.7 %id)
TI_1948230874   .b 298 to 972 138 to 816       679/1311
(51 %)
26 diff
(98.1 %id)
AY364251   .b 299 to 2432 1 to 2134 exact     2134/2135
(99 %)
3 diff
(99.9 %id)
EL737094 mixed .b 299 to 966 1 to 666       666/666
(100 %)
10 diff
(98.5 %id)
DB073730 testis .b 382 to 933 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
TI_149300581   .b 392 to 1163 846 to 80   AAA   767/950
(80 %)
15 diff
(98.5 %id)
BU429627 lymph .b 410 to 967 1 to 558       558/558
(100 %)
9 diff
(98.4 %id)
AW504027 lymph .b 417 to 886 1 to 470       470/470
(100 %)
6 diff
(98.8 %id)
TI_154150729   .b 417 to 1105 124 to 811       688/782
(87 %)
17 diff
(97.9 %id)
TI_154160049   .b 423 to 979 85 to 639       555/555
(100 %)
15 diff
(97.3 %id)
CF136479 lymph .b 470 to 798 8 to 336       329/336
(97 %)
7 diff
(98.0 %id)
TI_154165517   .b 470 to 971 80 to 589       510/546
(93 %)
24 diff
(95.7 %id)
BE837883 prostate_normal .b 485 to 653 1 to 169       169/200
(84 %)
8 diff
(96.0 %id)
BM976623 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 488 to 1163 694 to 19   AAA   676/676
(100 %)
4 diff
(99.5 %id)
BU517268 leiomyosarcoma, uterus .b 502 to 1243 1 to 748       748/916
(81 %)
18 diff
(98.1 %id)
CA311496 Human Lung Epithelial cells, lung .b 516 to 1162 705 to 58   AAA   648/687
(94 %)
11 diff
(98.4 %id)
TI_154165163   .b 517 to 1006 79 to 569       491/491
(100 %)
5 diff
(99.0 %id)
CF136209 lymph .b 526 to 937 16 to 428       413/428
(96 %)
11 diff
(97.5 %id)
CF136212 lymph .b 526 to 839 16 to 330       315/330
(95 %)
6 diff
(98.2 %id)
CF136213 lymph .b 526 to 821 16 to 312       297/314
(94 %)
8 diff
(97.5 %id)
CF136215 lymph .b 526 to 798 16 to 289       274/289
(94 %)
9 diff
(96.9 %id)
AL120745 melanoma (MeWo cell line) .b 527 to 1198 1 to 672       672/672
(100 %)
0 diff
(100 %id)
CF137261 lymph .b 551 to 1084 7 to 540       534/540
(98 %)
1 diff
(99.9 %id)
TI_154166686   .b 551 to 1188 79 to 719   AAA   641/821
(78 %)
13 diff
(98.5 %id)
AA310642 heart .b 574 to 842 1 to 269       269/338
(79 %)
1 diff
(99.8 %id)
BU429340 lymph .b 581 to 1050 1 to 470       470/470
(100 %)
5 diff
(99.0 %id)
TI_154150410   .b 588 to 1185 80 to 683       604/803
(75 %)
14 diff
(98.3 %id)
DB227647 trachea .b 594 to 1133 2 to 541   capped   540/540
(100 %)
4 diff
(99.3 %id)
BP872941 embryonal kidney .b 607 to 1181 1 to 574       574/583
(98 %)
1 diff
(99.9 %id)
TI_154164254   .b 621 to 1220 39 to 638       600/954
(62 %)
23 diff
(97.6 %id)
CF135719 lymph .b 628 to 1129 7 to 508       502/508
(98 %)
6 diff
(98.9 %id)
DA388295 thalamus .b 676 to 786 2 to 112   capped   111/111
(100 %)
0 diff
(100 %id)
AA356266   .b 688 to 1071 1 to 392       392/396
(98 %)
12 diff
(97.0 %id)
DA272812 caudate nucleus .b 715 to 1249 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
AK293232   .b 718 to 2418 1 to 1701   tiling clone,   1701/1701
(100 %)
0 diff
(100 %id)
DC299131   .b 718 to 1278 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
DB067171 testis .b 736 to 1193 2 to 461   capped   460/460
(100 %)
2 diff
(99.6 %id)
AA830102 germinal center B cell .b 764 to 1170 409 to 3       407/409
(99 %)
0 diff
(100 %id)
CF136558 lymph .b 812 to 1265 7 to 460       454/460
(98 %)
20 diff
(95.7 %id)
TI_154165715   .b 812 to 1285 79 to 552       474/474
(100 %)
16 diff
(96.7 %id)
DA395391 thalamus .b 846 to 1408 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
AI457813 carcinoid, lung .b 876 to 1162 287 to 1       287/287
(100 %)
0 diff
(100 %id)
BX431693 B cells (Ramos cell line) .b 885 to 1730 50 to 885       835/895
(93 %)
36 diff
(96.0 %id)
BM561553 blood, natural killer cells, cell line .b 961 to 1820 1 to 861       861/1002
(85 %)
15 diff
(98.6 %id)
H69413 liver and spleen .b 1013 to 1376 1 to 367       367/498
(73 %)
7 diff
(98.6 %id)
DA818757   .b 1025 to 1579 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
AA334624   .b 1289 to 1546 1 to 259       259/259
(100 %)
2 diff
(99.3 %id)
CN484140 eye .b 1333 to 1975 1 to 643       643/643
(100 %)
1 diff
(99.9 %id)
AK022658   .b 1355 to 3943 1 to 2590   available from FLJ,   2590/2590
(100 %)
5 diff
(99.9 %id)
AU125286   .b 1356 to 2205 2 to 849   capped   848/848
(100 %)
6 diff
(99.3 %id)
DB101123 thymus .b 1358 to 1882 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
BI224517 cervical carcinoma cell line, cervix .b 1365 to 1821 81 to 549       469/550
(85 %)
17 diff
(97.0 %id)
AW949081 prostate_tumor .b 1378 to 1704 334 to 9     Submitted on the opposite strand 326/334
(97 %)
9 diff
(97.4 %id)
BU501298 eye, normal pigmented retinal epithelium .b 1402 to 2195 1 to 803       803/955
(84 %)
12 diff
(98.8 %id)
CN344498 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1421 to 2093 19 to 693       675/693
(97 %)
9 diff
(98.8 %id)
BF797962 lymph, lymphoma, cell line .b 1424 to 2213 1 to 781       781/989
(78 %)
24 diff
(97.6 %id)
DA027060   .b 1449 to 2029 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA031058   .b 1449 to 2011 2 to 566   capped   565/565
(100 %)
3 diff
(99.5 %id)
DA521219 brain .b 1449 to 2007 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
AA443401   .b 1481 to 1932 1 to 452       452/452
(100 %)
0 diff
(100 %id)
H69851 liver and spleen .b 1491 to 1865 386 to 8       379/386
(98 %)
6 diff
(98.5 %id)
DA733882   .b 1535 to 2205 2 to 674   capped   673/673
(100 %)
17 diff
(97.5 %id)
AU124646   .b 1555 to 2295 2 to 742   capped   741/748
(99 %)
5 diff
(99.4 %id)
TI_57232753   .b 1557 to 2384 36 to 868       833/870
(95 %)
23 diff
(97.4 %id)
BI906473 leukocyte .b 1559 to 2384 1 to 831       831/833
(99 %)
17 diff
(98.0 %id)
EH342148   .b 1605 to 1700 1 to 96       96/96
(100 %)
0 diff
(100 %id)
DA913441   .b 1617 to 2193 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BG035265 adenocarcinoma, cell line, Liver .b 1632 to 2384 1 to 755       755/895
(84 %)
40 diff
(95.6 %id)
AW867799 stomach_normal .b 1646 to 2319 7 to 676       670/677
(98 %)
14 diff
(98.0 %id)
DA032522   .b 1664 to 2237 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BQ225424 epithelioid carcinoma, Pancreas .b 1691 to 2597 1 to 920       920/923
(99 %)
29 diff
(96.9 %id)
DB111824 thymus .b 1708 to 2292 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA949564 Spleen .b 1710 to 2261 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BF806417 colon_ins .b 1871 to 2346 1 to 477       477/477
(100 %)
11 diff
(97.7 %id)
AU148469   .b 3354 to 3945 589 to 1       589/589
(100 %)
18 diff
(97.0 %id)
AU150939   .b 3384 to 3945 561 to 1       561/561
(100 %)
13 diff
(97.7 %id)
AU148975   .b 3400 to 3943 545 to 1       545/549
(99 %)
13 diff
(97.7 %id)
DB342316 thymus .b 3462 to 3945 485 to 1       485/485
(100 %)
1 diff
(99.8 %id)
AA447368   .b 3594 to 3949 358 to 3   tiling clone,   356/365
(97 %)
0 diff
(100 %id)
AW575778 lymph .b 3597 to 3949 366 to 14       353/397
(88 %)
0 diff
(100 %id)
AW340795 pooled .c 1 to 446 450 to 1   tiling clone,   502/608
(82 %)
17 diff
(97.3 %id)
CD724151 eye, lacrimal gland .c 343 to 951 1 to 609   tiling clone,   609/609
(100 %)
0 diff
(100 %id)
CD724179 eye, lacrimal gland .c 343 to 902 1 to 560       560/560
(100 %)
0 diff
(100 %id)
BF898213 marrow .c 397 to 740 423 to 80     Submitted on the opposite strand 344/423
(81 %)
0 diff
(100 %id)
CU443440 epidermis .c 525 to 1223 722 to 24   tiling clone, Submitted on the opposite strand 699/722
(96 %)
0 diff
(100 %id)
AF155103   .d 1 to 2738 1 to 2739 exact tiling clone,   2739/2739
(100 %)
2 diff
(100.0 %id)
AW408629 lymph .d 188 to 495 1 to 308       308/308
(100 %)
3 diff
(99.1 %id)
DA838075 placenta .d 1004 to 1557 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
AA372933 lung .d 1044 to 1320 1 to 279       279/279
(100 %)
2 diff
(99.3 %id)
BG501684 embryonal carcinoma, testis .d 1060 to 1844 1 to 761       761/761
(100 %)
39 diff
(94.9 %id)
ES314063 occipital scalp hair, skin .d 1080 to 1311 1 to 232       232/232
(100 %)
2 diff
(99.2 %id)
BF830071 head_normal .d 1100 to 1428 18 to 345       328/345
(95 %)
6 diff
(98.3 %id)
BX433220.
matches multiple genes
B cells (Ramos cell line), B cells from Burkitt lymphoma .d 1109 to 1980 878 to 5     also hits gene GPBP1 874/939
(93 %)
0 diff
(100 %id)
BE543394 cervical carcinoma cell line, cervix .d 1112 to 1794 1 to 678       678/683
(99 %)
18 diff
(97.4 %id)
CX865790 embryonic stem .d 1126 to 1876 1 to 751     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 751/751
(100 %)
0 diff
(100 %id)
AW402900 lymph .d 1131 to 1602 9 to 481       473/481
(98 %)
6 diff
(98.8 %id)
TI_154139407   .d 1131 to 1777 92 to 739       648/740
(87 %)
20 diff
(97.3 %id)
CR602264 placenta .d 1194 to 2719 1 to 1526       1526/1526
(100 %)
0 diff
(100 %id)
AL542532 placenta .d 1194 to 2134 1 to 930   fully sequenced,   930/930
(100 %)
7 diff
(99.3 %id)
AA164304   .d 1196 to 1325 1 to 132     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 132/132
(100 %)
2 diff
(98.5 %id)
BG392923 embryonal carcinoma, cell line, testis .d 1216 to 1536 1 to 320       320/320
(100 %)
4 diff
(98.8 %id)
BF925848 nervous_tumor .d 1231 to 1728 512 to 17     Submitted on the opposite strand 496/512
(96 %)
0 diff
(100 %id)
CB122859 Liver .d 1239 to 1784 1 to 546       546/546
(100 %)
0 diff
(100 %id)
BG282871 adenocarcinoma, cell line, Prostate .d 1253 to 2049 1 to 793       793/957
(82 %)
33 diff
(96.6 %id)
AV703531 adrenal gland .d 1266 to 1880 1 to 615       615/616
(99 %)
11 diff
(98.3 %id)
BG942101 blood .d 1282 to 1608 1 to 327       327/327
(100 %)
0 diff
(100 %id)
BF923144 nervous_tumor .d 1303 to 1711 425 to 22     Submitted on the opposite strand 404/425
(95 %)
0 diff
(100 %id)
T36253 thyroid gland .d 1374 to 1602 1 to 229       229/229
(100 %)
0 diff
(100 %id)
CD172544 White Matter .d 1376 to 2051 1 to 686       686/856
(80 %)
13 diff
(98.5 %id)
BI036524 nervous_tumor .d 1380 to 1943 26 to 587       562/589
(95 %)
19 diff
(96.8 %id)
T19287   .d 1384 to 1753 1 to 370       370/370
(100 %)
6 diff
(98.4 %id)
FN156250 breast carcinoma .d 1389 to 1483 92 to 1     Submitted on the opposite strand 92/95
(96 %)
5 diff
(94.8 %id)
EB387479 eye, optic nerve .d 1400 to 2237 1 to 838       838/838
(100 %)
3 diff
(99.7 %id)
D82712   .d 1457 to 1827 11 to 382       372/384
(96 %)
13 diff
(96.7 %id)
N77641 liver and spleen .d 1465 to 1761 1 to 298       298/300
(99 %)
6 diff
(98.0 %id)
AA017277 eye, retina .d 1468 to 1691 1 to 224       224/224
(100 %)
2 diff
(99.2 %id)
W96232 eye, retina .d 1469 to 1935 1 to 471       471/491
(95 %)
5 diff
(99.0 %id)
EH348150   .d 1509 to 1581 1 to 73       73/73
(100 %)
0 diff
(100 %id)
T18604   .d 1517 to 1738 1 to 222       222/222
(100 %)
1 diff
(99.6 %id)
T85609 liver and spleen .d 1526 to 1806 1 to 286       286/288
(99 %)
6 diff
(98.0 %id)
W79128 heart .d 1556 to 1986 1 to 436       436/436
(100 %)
10 diff
(97.8 %id)
BM798794 myeloma .d 1581 to 1970 1 to 390       390/390
(100 %)
0 diff
(100 %id)
BU941274 mixed (pool of 40 RNAs) .d 1583 to 2517 1 to 949       949/952
(99 %)
47 diff
(95.1 %id)
AW504731 lymph .d 1595 to 2157 8 to 570       563/570
(98 %)
10 diff
(98.3 %id)
TI_154160997   .d 1595 to 2338 71 to 809       739/744
(99 %)
7 diff
(99.1 %id)
N41740 placenta .d 1615 to 1937 1 to 322       322/322
(100 %)
2 diff
(99.4 %id)
AL560278 B cells (Ramos cell line), B cells from Burkitt lymphoma .d 1618 to 2706 1086 to 1       1086/1098
(98 %)
16 diff
(98.6 %id)
FN100889 breast carcinoma .d 1629 to 1730 104 to 1     Submitted on the opposite strand 104/109
(95 %)
2 diff
(98.2 %id)
W46913 senescent fibroblast .d 1669 to 2128 16 to 480       465/485
(95 %)
9 diff
(98.2 %id)
R82534 placenta .d 1675 to 2079 1 to 413       413/420
(98 %)
16 diff
(96.2 %id)
EL955192 eyeball .d 1725 to 2174 35 to 481       447/481
(92 %)
15 diff
(96.9 %id)
CU457324 epidermis .d 1732 to 2428 24 to 716       693/729
(95 %)
8 diff
(99.0 %id)
EL951214 eyeball .d 1735 to 1884 34 to 186       153/186
(82 %)
6 diff
(96.8 %id)
BF447132 Prostate .d 1738 to 1976 239 to 1       239/239
(100 %)
0 diff
(100 %id)
BG697365 skin .d 1743 to 2617 1 to 874       874/875
(99 %)
38 diff
(95.7 %id)
AA371369 Prostate .d 1747 to 2037 1 to 291       291/291
(100 %)
0 diff
(100 %id)
AW579783 head_neck .d 1784 to 2417 1 to 632       632/632
(100 %)
14 diff
(97.8 %id)
AJ715008 bone marrow .d 1821 to 2214 1 to 394       394/394
(100 %)
0 diff
(100 %id)
BG569804 lung .d 1823 to 2364 1 to 556       556/588
(94 %)
15 diff
(97.5 %id)
BF218520 brain, glioblastoma .d 1860 to 2370 1 to 505       505/692
(72 %)
13 diff
(98.2 %id)
ES312330 frontal balding hair, skin .d 1882 to 2050 1 to 169       169/169
(100 %)
0 diff
(100 %id)
ES309950 scalp interfollicular dermis, skin .d 1884 to 2387 1 to 504       504/504
(100 %)
3 diff
(99.5 %id)
BX105209 melanocyte .d 1894 to 2536 1 to 643       643/643
(100 %)
0 diff
(100 %id)
TI_57187236   .d 1894 to 2734 55 to 897       843/879
(95 %)
24 diff
(97.3 %id)
BI858097 breast, mammary adenocarcinoma, cell line .d 1895 to 2734 1 to 842       842/878
(95 %)
24 diff
(97.3 %id)
AA298273 Bone .d 1901 to 2209 1 to 313       313/313
(100 %)
5 diff
(98.5 %id)
TI_149294851   .d 1911 to 2734 884 to 72   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 813/1025
(79 %)
18 diff
(98.3 %id)
AW959688   .d 1916 to 2464 1 to 545       545/548
(99 %)
15 diff
(97.3 %id)
D81367 brain .d 1918 to 2192 1 to 275       275/275
(100 %)
3 diff
(99.0 %id)
BU853539 testis .d 1938 to 2726 1 to 793       793/806
(98 %)
13 diff
(98.4 %id)
T63196 lung .d 1941 to 2261 1 to 325       325/348
(93 %)
14 diff
(96.0 %id)
BE937006 stomach_normal .d 1967 to 2309 1 to 342       342/342
(100 %)
12 diff
(96.5 %id)
BE841092 stomach_normal .d 1972 to 2447 25 to 502       478/502
(95 %)
6 diff
(98.9 %id)
H70369 liver and spleen .d 1974 to 2432 11 to 472   fully sequenced,   462/472
(97 %)
6 diff
(98.8 %id)
AA442320   .d 1976 to 2248 1 to 273       273/273
(100 %)
0 diff
(100 %id)
BQ364709 stomach_normal .d 1978 to 2473 9 to 493       485/495
(97 %)
51 diff
(89.7 %id)
BE841008 stomach_normal .d 1980 to 2359 1 to 378       378/379
(99 %)
16 diff
(95.8 %id)
BM822023 stomach .d 1980 to 2237 1 to 259       259/259
(100 %)
2 diff
(99.3 %id)
BU608371 Human Lung Epithelial cells, lung .d 1983 to 2734 768 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 752/763
(98 %)
0 diff
(100 %id)
H97455.
matches multiple genes
melanocyte .d 1985 to 2372 1 to 402     also hits gene werjaw 402/402
(100 %)
18 diff
(95.6 %id)
AW381998 head_neck .d 1989 to 2392 6 to 410       405/430
(94 %)
6 diff
(98.7 %id)
AW381996 head_neck .d 1998 to 2398 14 to 416       403/562
(71 %)
9 diff
(98.4 %id)
BE169356 head_neck .d 1999 to 2452 9 to 462       454/519
(87 %)
6 diff
(98.9 %id)
AW795274 uterus .d 2001 to 2393 1 to 391       391/393
(99 %)
18 diff
(95.5 %id)
AW879438 ovary .d 2010 to 2395 1 to 385       385/385
(100 %)
7 diff
(98.2 %id)
BE169608 head_neck .d 2013 to 2384 1 to 370       370/376
(98 %)
5 diff
(98.7 %id)
BE169661 head_neck .d 2015 to 2384 1 to 372       372/378
(98 %)
9 diff
(97.7 %id)
BE169807 head_neck .d 2015 to 2207 1 to 193       193/193
(100 %)
1 diff
(99.5 %id)
BE169548 head_neck .d 2016 to 2375 1 to 359       359/359
(100 %)
2 diff
(99.5 %id)
BE169616 head_neck .d 2016 to 2356 1 to 342       342/342
(100 %)
19 diff
(94.5 %id)
BE813663 breast_normal .d 2016 to 2387 2 to 370       369/379
(97 %)
9 diff
(97.7 %id)
BE169483 head_neck .d 2017 to 2460 1 to 444       444/444
(100 %)
23 diff
(94.9 %id)
BE169655 head_neck .d 2022 to 2370 9 to 355       347/355
(97 %)
6 diff
(98.4 %id)
AW879297 ovary .d 2023 to 2496 7 to 478       472/478
(98 %)
6 diff
(98.8 %id)
BF353016 head_neck .d 2026 to 2481 28 to 483       456/483
(94 %)
10 diff
(98.0 %id)
BE709916 head_neck .d 2027 to 2145 1 to 119       119/119
(100 %)
0 diff
(100 %id)
CN478944 Human Lung Epithelial cells, lung .d 2030 to 2734 721 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 705/705
(100 %)
0 diff
(100 %id)
EL949843 eyeball .d 2032 to 2609 1 to 580       580/580
(100 %)
6 diff
(99.0 %id)
BQ003347 Chondrosarcoma, Left Pelvis .d 2034 to 2734 718 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 700/704
(99 %)
3 diff
(99.6 %id)
BU683467 lung .d 2059 to 2734 692 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 676/676
(100 %)
2 diff
(99.8 %id)
CX865729 embryonic stem .d 2080 to 2730 681 to 31   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 651/651
(100 %)
0 diff
(100 %id)
R31900 placenta .d 2081 to 2455 1 to 388   fully sequenced,   388/388
(100 %)
23 diff
(94.1 %id)
H12645 placenta .d 2081 to 2508 1 to 431   fully sequenced,   431/431
(100 %)
15 diff
(96.6 %id)
BQ006892 Chondrosarcoma, Left Pelvis .d 2086 to 2734 666 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 650/650
(100 %)
2 diff
(99.7 %id)
H77437 liver and spleen .d 2096 to 2477 1 to 394   fully sequenced,   394/394
(100 %)
12 diff
(97.0 %id)
CN298917 embryonic stem cells, DMSO-treated H9 cellline .d 2098 to 2452 1 to 356       356/356
(100 %)
1 diff
(99.8 %id)
CB053677 leiomyosarcoma, soft tissue .d 2098 to 2347 6 to 256   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 251/256
(98 %)
7 diff
(97.3 %id)
AL569476 placenta .d 2104 to 2719 603 to 1   fully sequenced,   603/603
(100 %)
9 diff
(98.6 %id)
BI520201 brain, medulla .d 2110 to 2706 1 to 599       599/1070
(55 %)
18 diff
(98.4 %id)
TI_43963583   .d 2110 to 2706 35 to 633   AAA   599/1092
(54 %)
18 diff
(98.4 %id)
BF765215 colon_est .d 2113 to 2456 1 to 342       342/342
(100 %)
4 diff
(98.9 %id)
CV411486 colon_ins .d 2119 to 2627 1 to 507       507/507
(100 %)
41 diff
(92.0 %id)
AA261993 germinal center B cell .d 2133 to 2482 1 to 348   fully sequenced,   348/348
(100 %)
1 diff
(99.8 %id)
AA644647 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 2176 to 2533 1 to 359       359/359
(100 %)
2 diff
(99.5 %id)
AA526912 breast .d 2182 to 2734 561 to 14   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 548/549
(99 %)
39 diff
(92.9 %id)
EL950319 eyeball .d 2185 to 2683 7 to 505       499/505
(98 %)
6 diff
(98.9 %id)
TI_154109696   .d 2200 to 2734 620 to 86   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 535/946
(56 %)
0 diff
(100 %id)
CA311092 Human Lung Epithelial cells, lung .d 2207 to 2734 543 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 527/536
(98 %)
1 diff
(99.9 %id)
BI491257 cochlea, ear .d 2228 to 2738 545 to 35       511/545
(93 %)
0 diff
(100 %id)
AW117755 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 2239 to 2720 489 to 8       482/489
(98 %)
0 diff
(100 %id)
BQ004966 Chondrosarcoma, Left Pelvis .d 2248 to 2730 501 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 483/486
(99 %)
4 diff
(99.2 %id)
AW069120 bone marrow stroma .d 2251 to 2734 502 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 484/484
(100 %)
0 diff
(100 %id)
BE047720 brain, tumor, 5 pooled (see description) .d 2253 to 2563 119 to 429       311/429
(72 %)
6 diff
(98.7 %id)
BE047728 brain, tumor, 5 pooled (see description) .d 2253 to 2570 119 to 436       318/436
(72 %)
6 diff
(98.7 %id)
BE047721 brain, tumor, 5 pooled (see description) .d 2253 to 2572 119 to 438       320/438
(73 %)
6 diff
(98.7 %id)
AI912357 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .d 2254 to 2738 486 to 2       485/486
(99 %)
0 diff
(100 %id)
AW075888 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .d 2256 to 2735 481 to 1       481/481
(100 %)
3 diff
(99.4 %id)
AW190866 adenocarcinoma, Pancreas .d 2260 to 2738 500 to 20       481/500
(96 %)
0 diff
(100 %id)
AA527397 colon .d 2264 to 2736 473 to 1       473/473
(100 %)
3 diff
(99.4 %id)
AI131047 heart .d 2264 to 2733 471 to 2       470/471
(99 %)
0 diff
(100 %id)
AA027806 uterus .d 2265 to 2738 484 to 3       482/484
(99 %)
0 diff
(100 %id)
BM670113 eye, fetal eyes .d 2266 to 2738 487 to 15       473/487
(97 %)
0 diff
(100 %id)
BG231676 blood, lymphocyte .d 2268 to 2738 473 to 3       471/473
(99 %)
0 diff
(100 %id)
AW576141.
matches multiple genes
lymph .d 2272 to 2738 482 to 14     also hits gene CCDC88A 469/482
(97 %)
0 diff
(100 %id)
W47248 senescent fibroblast .d 2276 to 2515 1 to 244   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 244/244
(100 %)
2 diff
(99.2 %id)
BF919659 nervous_tumor .d 2285 to 2603 27 to 345       319/354
(90 %)
3 diff
(99.2 %id)
BI036661 nervous_tumor .d 2285 to 2522 20 to 256       237/256
(92 %)
6 diff
(97.7 %id)
AW028651 fibrotheoma, ovary .d 2292 to 2734 444 to 1       444/444
(100 %)
2 diff
(99.6 %id)
AI446789 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 2293 to 2738 449 to 3       447/449
(99 %)
0 diff
(100 %id)
TI_154133345   .d 2306 to 2738 520 to 86       435/1132
(38 %)
0 diff
(100 %id)
W94305 heart .d 2308 to 2735 431 to 1       431/431
(100 %)
3 diff
(99.4 %id)
N26250 melanocyte .d 2312 to 2734 424 to 1       424/424
(100 %)
1 diff
(99.8 %id)
W46785 senescent fibroblast .d 2315 to 2734 424 to 1       424/424
(100 %)
4 diff
(99.1 %id)
AA652413 normal prostate, Prostate .d 2315 to 2661 347 to 1       347/347
(100 %)
0 diff
(100 %id)
CB053676 leiomyosarcoma, soft tissue .d 2317 to 2734 443 to 26   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 418/418
(100 %)
0 diff
(100 %id)
AI445713 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 2333 to 2738 417 to 11       407/417
(97 %)
0 diff
(100 %id)
AI612754 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 2333 to 2719 411 to 24   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 388/388
(100 %)
3 diff
(99.3 %id)
BF197690 brain, glioblastoma (pooled) .d 2333 to 2732 400 to 1       400/400
(100 %)
1 diff
(99.8 %id)
AA483310 colon .d 2337 to 2735 399 to 1       399/399
(100 %)
0 diff
(100 %id)
BQ186486 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 2337 to 2734 1 to 398   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 398/398
(100 %)
0 diff
(100 %id)
AI200812   .d 2341 to 2732 407 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 392/392
(100 %)
0 diff
(100 %id)
AW072745 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .d 2343 to 2734 392 to 1       392/392
(100 %)
0 diff
(100 %id)
AI024478   .d 2345 to 2738 395 to 2       394/395
(99 %)
0 diff
(100 %id)
AI285748 lymph node, mantle cell lymphoma .d 2345 to 2734 409 to 20   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 390/390
(100 %)
0 diff
(100 %id)
AA722582 heart .d 2346 to 2734 389 to 1       389/389
(100 %)
0 diff
(100 %id)
AA017191 eye, retina .d 2355 to 2738 392 to 4       389/392
(99 %)
0 diff
(100 %id)
CB118210 brain .d 2356 to 2488 1 to 134       134/134
(100 %)
2 diff
(98.6 %id)
AI148722 placenta .d 2370 to 2743 374 to 1   tiling clone,   374/374
(100 %)
1 diff
(99.8 %id)
AA923515 Kidney .d 2375 to 2734 360 to 1       360/365
(98 %)
0 diff
(100 %id)
BQ019694 Chondrosarcoma, Left Pubic Bone .d 2378 to 2734 372 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 356/377
(94 %)
1 diff
(99.8 %id)
BM687667 eye, eye anterior segment .d 2378 to 2736 9 to 367       359/367
(97 %)
6 diff
(98.4 %id)
T83585 liver and spleen .d 2385 to 2735 353 to 1       353/353
(100 %)
6 diff
(98.4 %id)
AA075833   .d 2387 to 2731 1 to 345       345/345
(100 %)
0 diff
(100 %id)
AA453639   .d 2387 to 2738 352 to 1       352/352
(100 %)
2 diff
(99.5 %id)
TI_154137157   .d 2387 to 2719 417 to 85   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 333/884
(37 %)
3 diff
(99.7 %id)
AA652461 normal prostate, Prostate .d 2388 to 2732 345 to 1       345/345
(100 %)
2 diff
(99.5 %id)
W46423 senescent fibroblast .d 2394 to 2734 353 to 13   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 341/341
(100 %)
0 diff
(100 %id)
R82484 placenta .d 2401 to 2675 278 to 1       278/279
(99 %)
6 diff
(97.9 %id)
AI084263 parathyroid gland, parathyroid tumor .d 2401 to 2734 345 to 14   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 332/332
(100 %)
2 diff
(99.4 %id)
T91096 liver and spleen .d 2408 to 2738 340 to 6       335/340
(98 %)
0 diff
(100 %id)
BE872735 adenocarcinoma, colon .d 2410 to 2734 1 to 325   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 325/325
(100 %)
5 diff
(98.5 %id)
AA310631 heart .d 2411 to 2734 325 to 1       325/327
(99 %)
2 diff
(99.4 %id)
AA810893 germinal center B cell .d 2421 to 2734 361 to 48   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 314/314
(100 %)
0 diff
(100 %id)
AI189924 placenta .d 2422 to 2743 328 to 7       322/328
(98 %)
0 diff
(100 %id)
R31289 placenta .d 2425 to 2735 323 to 1   fully sequenced,   323/323
(100 %)
16 diff
(95.1 %id)
AA639629 colon, colon tumor RER+ .d 2428 to 2722 295 to 1       295/295
(100 %)
0 diff
(100 %id)
H69704 liver and spleen .d 2430 to 2743 320 to 5   fully sequenced,   316/320
(98 %)
0 diff
(100 %id)
AA779839   .d 2432 to 2738 308 to 1       308/308
(100 %)
1 diff
(99.7 %id)
AI220763 placenta .d 2441 to 2735 294 to 1       294/294
(100 %)
1 diff
(99.7 %id)
AA018625 eye, retina .d 2442 to 2738 312 to 6       307/376
(81 %)
0 diff
(100 %id)
FN049762 breast carcinoma .d 2446 to 2521 1 to 77       77/78
(98 %)
2 diff
(97.5 %id)
H77438 liver and spleen .d 2447 to 2744 306 to 7   fully sequenced,   300/306
(98 %)
6 diff
(98.1 %id)
AI766326 Kidney .d 2450 to 2738 291 to 3       289/291
(99 %)
0 diff
(100 %id)
AI866442 lymph node, lymphoma, follicular mixed small and largecell .d 2450 to 2738 290 to 2       289/290
(99 %)
0 diff
(100 %id)
AA261807 germinal center B cell .d 2452 to 2734 283 to 1   fully sequenced,   283/283
(100 %)
1 diff
(99.7 %id)
AA976449 2 pooled tumors (clear cell type), Kidney .d 2468 to 2734 297 to 32   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 266/266
(100 %)
1 diff
(99.7 %id)
H12596 placenta .d 2478 to 2735 259 to 1   fully sequenced,   259/259
(100 %)
3 diff
(98.9 %id)
W47150 senescent fibroblast .d 2485 to 2734 265 to 16   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 250/250
(100 %)
1 diff
(99.6 %id)
AI698371 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 2514 to 2734 238 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 221/221
(100 %)
0 diff
(100 %id)
CD678777 eye, Trabecular meshwork .d 2535 to 2734 1 to 200   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 200/200
(100 %)
0 diff
(100 %id)
AA164305   .d 2568 to 2734 186 to 21   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 166/166
(100 %)
1 diff
(99.4 %id)
AI636624 Kidney, renal cell tumor .d 2573 to 2738 202 to 36       167/202
(82 %)
0 diff
(100 %id)
FN058028 breast carcinoma .d 2590 to 2697 1 to 109       109/109
(100 %)
2 diff
(98.2 %id)
AA933802 2 pooled tumors (clear cell type), Kidney .d 2604 to 2738 135 to 1       135/135
(100 %)
0 diff
(100 %id)
EC470446 Prostate .d 2605 to 2702 24 to 116       93/116
(80 %)
6 diff
(94.9 %id)
AA992014   .d 2609 to 2738 130 to 1       130/130
(100 %)
0 diff
(100 %id)
GD137362   .d 2641 to 2738 1 to 98       98/102
(96 %)
2 diff
(98.1 %id)
BC057817 Placenta, normal .e 1 to 2331 2 to 2332 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 2332/2334
(99 %)
4 diff
(99.9 %id)
TI_1948230379   .e 258 to 1041 136 to 922   fully sequenced,   787/922
(85 %)
20 diff
(97.9 %id)
TI_1948230709   .e 258 to 643 137 to 522   fully sequenced,   386/522
(73 %)
6 diff
(98.9 %id)
TI_1948230380   .e 586 to 1043 583 to 126   fully sequenced,   458/485
(94 %)
1 diff
(99.8 %id)
TI_1948230710   .e 593 to 1043 561 to 111   fully sequenced,   451/478
(94 %)
1 diff
(99.8 %id)
AI207245 placenta .e 659 to 1216 562 to 4   tiling clone,   559/562
(99 %)
3 diff
(99.5 %id)
AA608591 lung, lung carcinoma .e 1843 to 2334 491 to 1       491/491
(100 %)
6 diff
(98.8 %id)
AV703138 adrenal gland .e 2240 to 2919 1 to 678   tiling clone,   678/678
(100 %)
10 diff
(98.6 %id)
DA273370 caudate nucleus .e 2364 to 2918 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA273378 caudate nucleus .e 2364 to 2924 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BF988441 placenta_normal .e 2369 to 2583 212 to 1       212/212
(100 %)
5 diff
(97.7 %id)
CN290527 embryonic stem cells, DMSO-treated H9 cellline .e 2371 to 3102 1 to 732       732/732
(100 %)
4 diff
(99.5 %id)
DA961975 Spleen .e 2484 to 3035 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
BX641690   .e 2518 to 2934 1 to 417       417/417
(100 %)
0 diff
(100 %id)
T94940 lung .e 2591 to 2895 1 to 316       316/366
(86 %)
12 diff
(96.8 %id)
EL593643 epidermis, skin .e 2657 to 3141 1 to 488   tiling clone,   488/492
(99 %)
6 diff
(98.8 %id)
T94994 lung .e 2948 to 3453 500 to 1   tiling clone,   500/500
(100 %)
8 diff
(98.4 %id)
BF963485 nervous_normal .e 3117 to 3602 29 to 523   tiling clone,   495/523
(94 %)
8 diff
(98.5 %id)
AL602045   .e 3504 to 3869 1 to 366   tiling clone,   366/366
(100 %)
0 diff
(100 %id)
TI_149287889   .e 3667 to 4318 712 to 61       652/1082
(60 %)
0 diff
(100 %id)
BM970069 lung .e 3701 to 4295 613 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 595/595
(100 %)
0 diff
(100 %id)
BF516252   .e 3749 to 4295 564 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 547/547
(100 %)
2 diff
(99.7 %id)
DB307095 caudate nucleus .e 3766 to 4295 531 to 1       531/531
(100 %)
2 diff
(99.7 %id)
AA702925 liver and spleen .e 3768 to 4277 507 to 1       507/507
(100 %)
3 diff
(99.5 %id)
AI935427 Kidney .e 3791 to 4295 506 to 1       506/506
(100 %)
1 diff
(99.9 %id)
AI419953 pooled .e 3792 to 4298 507 to 1       507/507
(100 %)
0 diff
(100 %id)
AA699642 liver and spleen .e 3800 to 4295 495 to 1       495/495
(100 %)
1 diff
(99.8 %id)
BX098259 brain, tumor, 5 pooled (see description) .e 3852 to 4307 458 to 3   tiling clone, Submitted on the opposite strand 456/458
(99 %)
0 diff
(100 %id)
AA358054 lung .e 3888 to 4151 1 to 264       264/264
(100 %)
0 diff
(100 %id)
AW958869   .e 3888 to 4316 1 to 431   tiling clone,   431/546
(78 %)
7 diff
(98.8 %id)
AI866766 brain, tumor, 5 pooled (see description) .e 3901 to 4296 396 to 1       396/396
(100 %)
0 diff
(100 %id)
AA358053 lung .e 4043 to 4295 253 to 1       253/253
(100 %)
2 diff
(99.3 %id)
DA040973 bladder .f 1 to 571 2 to 573   tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
AK095130 substantia nigra .f 518 to 2854 1 to 2337   tiling clone, available from FLJ,   2337/2337
(100 %)
2 diff
(100.0 %id)
DA342242 substantia nigra .f 519 to 1078 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DB310159 substantia nigra .f 2328 to 2854 528 to 1       528/530
(99 %)
1 diff
(99.9 %id)
DA335059 hippocampus .g 1 to 571 2 to 572   tiling clone, capped   571/571
(100 %)
3 diff
(99.5 %id)
DA123911 cerebellum .g 388 to 935 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA405069 thalamus .g 539 to 1099 2 to 562   tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
DA327772 hippocampus .g 614 to 1162 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA336196 hippocampus .g 770 to 1363 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DB531051.
matches multiple genes
hippocampus .g 876 to 1281 412 to 4     also hits gene C12orf76 409/412
(99 %)
0 diff
(100 %id)
DB536004.
matches multiple genes
hippocampus .g 876 to 1329 454 to 1     also hits gene C12orf76 454/454
(100 %)
1 diff
(99.8 %id)
DB547746.
matches multiple genes
hippocampus .g 876 to 1311 436 to 1     also hits gene C12orf76 436/436
(100 %)
1 diff
(99.8 %id)
G36685   .g 893 to 1274 1 to 384       384/386
(99 %)
4 diff
(99.0 %id)
DB220991 trachea .g 909 to 1465 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA241858 brain .g 933 to 1525 2 to 594   tiling clone, capped   593/593
(100 %)
0 diff
(100 %id)
DA405702 thalamus .g 940 to 1480 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
AK130522 salivary gland .g 1177 to 4491 1 to 3316 exact tiling clone, available from FLJ,   3316/3316
(100 %)
1 diff
(100.0 %id)
DB145318 thymus .g 1335 to 1879 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB506076.
matches multiple genes
hypothalamus .g 1336 to 1833 1 to 498     also hits gene sanimi 498/498
(100 %)
0 diff
(100 %id)
DA531772 brain .g 1366 to 1967 2 to 604   capped   603/603
(100 %)
1 diff
(99.9 %id)
DA385384 thalamus .g 1368 to 1861 2 to 495   capped   494/494
(100 %)
0 diff
(100 %id)
DA042702 bladder .g 1369 to 1913 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB093528 testis .g 1385 to 1943 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
AW897939 nervous_normal .g 1429 to 1658 32 to 261       230/263
(87 %)
7 diff
(97.4 %id)
BI049996 placenta_normal .g 1468 to 1785 23 to 341       319/341
(93 %)
6 diff
(98.3 %id)
BG911814 anaplastic oligodendroglioma with 1p/19qloss, brain .g 1551 to 1619 574 to 646       626/921
(67 %)
21 diff
(97.8 %id)
DA870447 Prostate .g 1589 to 2077 2 to 490   capped   489/489
(100 %)
0 diff
(100 %id)
DA438750 tongue, tumor tissue .g 1616 to 1957 2 to 343   capped   342/342
(100 %)
0 diff
(100 %id)
DA372907 thalamus .g 1646 to 2177 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DB313545 tongue, tumor tissue .g 3950 to 4491 542 to 1   tiling clone,   542/542
(100 %)
0 diff
(100 %id)
DB300676 cerebellum .g 4249 to 4489 243 to 3       241/243
(99 %)
0 diff
(100 %id)
DB237299 trachea .h 1 to 493 2 to 494   tiling clone, capped   493/493
(100 %)
0 diff
(100 %id)
DC333423 hippocampus .h 15 to 561 1 to 548       548/548
(100 %)
2 diff
(99.7 %id)
AK308923 brain .h 17 to 1471 1 to 1454 exact tiling clone,   1454/1454
(100 %)
2 diff
(99.9 %id)
DC325365 brain .h 17 to 596 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
BQ422735 large cell carcinoma, lung .h 33 to 593 31 to 591       561/976
(57 %)
11 diff
(98.9 %id)
AA334722   .h 42 to 356 1 to 316       316/316
(100 %)
1 diff
(99.7 %id)
BM044478 carcinoma, cell line, Prostate .h 43 to 402 1 to 360       360/360
(100 %)
1 diff
(99.8 %id)
DC415950 trachea .h 65 to 609 1 to 546       546/546
(100 %)
2 diff
(99.7 %id)
CN344499 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .h 66 to 713 1 to 647       647/647
(100 %)
2 diff
(99.7 %id)
AW965476   .h 1173 to 1812 1 to 645   tiling clone,   645/645
(100 %)
12 diff
(98.2 %id)
DA756489   .i 1 to 466 2 to 467   tiling clone, capped   466/466
(100 %)
1 diff
(99.8 %id)
BF364202 nervous_normal .i 424 to 858 445 to 11   tiling clone,   435/447
(97 %)
5 diff
(98.9 %id)
AW137322   .i 681 to 908 245 to 18   tiling clone, AAA   228/228
(100 %)
8 diff
(96.5 %id)
DA830217 placenta .j 1 to 749 2 to 757   tiling clone, capped   756/762
(99 %)
12 diff
(98.5 %id)
DB375286 placenta .j 2185 to 2665 489 to 9   tiling clone,   481/504
(95 %)
0 diff
(100 %id)
CD242698 brain, Pituitary .k 1 to 701 1 to 705 exact tiling clone,   705/883
(79 %)
10 diff
(98.9 %id)
AA167818   .l 1 to 515 1 to 511 exact tiling clone, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 511/604
(84 %)
8 diff
(98.7 %id)
AA167704   .l 1255 to 1797 550 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 534/573
(93 %)
18 diff
(96.9 %id)
DB209635 trachea .m-u 1 to 540 2 to 541   tiling clone, capped   540/540
(100 %)
3 diff
(99.5 %id)
BQ072474 pooled lung and spleen .m-u 405 to 1328 20 to 956 exact tiling clone,   937/1076
(87 %)
31 diff
(97.2 %id)
CB046231 2 pooled tumors (clear cell type), Kidney .m-u 436 to 1115 10 to 689   tiling clone, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 680/689
(98 %)
6 diff
(99.2 %id)
BF853594 lung_normal .m-u 449 to 737 2 to 293       292/349
(83 %)
18 diff
(94.9 %id)
CB046230 2 pooled tumors (clear cell type), Kidney .m-u 1660 to 2259 625 to 27   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 599/599
(100 %)
2 diff
(99.7 %id)
BE818391 breast_normal .n-u 1 to 543 8 to 550 S26C tiling clone,   543/550
(98 %)
9 diff
(98.4 %id)
BF329849 breast_normal .n-u 1 to 429 22 to 450 exact tiling clone,   429/450
(95 %)
6 diff
(98.7 %id)
BQ312893 breast_normal .n-u 310 to 700 398 to 6   tiling clone,   393/556
(70 %)
0 diff
(100 %id)
BF329841 breast_normal .n-u 332 to 700 374 to 6   tiling clone,   369/375
(98 %)
0 diff
(100 %id)
AK025261 colon Gene ANKRD13A, variant not shown       available from FLJ, AAA Suspected internal deletion, this clone was ignored    
BQ308012 breast Gene ANKRD13A, variant not shown         This clone was ignored    
BX492364   Gene ANKRD13A, variant not shown         This clone was ignored    
AU158564 placenta Gene ANKRD13A, variant not shown       AAA This clone was ignored    
DA834169 placenta Gene ANKRD13A, variant not shown       capped This clone was ignored    
DC400055 testis Gene ANKRD13A, variant not shown         Suspected internal deletion, this clone was ignored    
DC400716 testis Gene ANKRD13A, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m-u, .n-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI