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Gene ANGPTL6TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
35 supporting clones for gene ANGPTL6 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CR617920 Placenta Cot 25-normalized .a 1 to 1748 1 to 1748 exact tiling clone,   1748/1748
(100 %)
0 diff
(100 %id)
AL543746 placenta, Placenta Cot 25-normalized .a 1 to 925 1 to 917       917/917
(100 %)
13 diff
(98.6 %id)
BX364684 Placenta Cot 25-normalized .a 1 to 1047 1 to 1034       1034/1053
(98 %)
31 diff
(97.1 %id)
AY358276   .a 2 to 1781 1 to 1780 exact tiling clone,   1780/1780
(100 %)
1 diff
(100.0 %id)
AF230330   .b 1 to 1904 1 to 1906 E92K tiling clone, AAA   1906/1906
(100 %)
10 diff
(99.5 %id)
AB054064   .b 49 to 1905 1 to 1857 exact tiling clone,   1857/1857
(100 %)
0 diff
(100 %id)
NM_031917.2   .b 49 to 1905 1 to 1857 exact RefSeq,   1857/1857
(100 %)
0 diff
(100 %id)
CR591845 Placenta Cot 25-normalized .b 121 to 1861 1 to 1741 exact     1741/1741
(100 %)
0 diff
(100 %id)
AL545641 placenta, Placenta Cot 25-normalized .b 121 to 1034 1 to 910   fully sequenced,   910/910
(100 %)
23 diff
(97.5 %id)
BC142632 Donated clones,Novartis FGA collection .b 131 to 1903 1 to 1773 exact AAA   1773/1773
(100 %)
1 diff
(100.0 %id)
CR621970 Placenta Cot 25-normalized .b 133 to 1871 1 to 1739 exact     1739/1739
(100 %)
0 diff
(100 %id)
BX381710 Placenta Cot 25-normalized .b 133 to 934 1 to 801   fully sequenced,   801/801
(100 %)
7 diff
(99.2 %id)
BP308161 brain .b 692 to 1276 1 to 585       585/585
(100 %)
1 diff
(99.9 %id)
BX364683 Placenta Cot 25-normalized .b 832 to 1869 1028 to 1       1028/1032
(99 %)
18 diff
(98.3 %id)
BX381709 Placenta Cot 25-normalized .b 904 to 1871 962 to 1   fully sequenced,   962/962
(100 %)
9 diff
(99.1 %id)
BX355859 Placenta Cot 25-normalized .b 925 to 1846 951 to 30       922/951
(96 %)
9 diff
(99.1 %id)
AA313128 colon .b 928 to 1112 1 to 185       185/185
(100 %)
2 diff
(99.0 %id)
AL570222 placenta, Placenta Cot 25-normalized .b 940 to 1870 932 to 1       932/932
(100 %)
19 diff
(98.0 %id)
AL545771 placenta, Placenta Cot 25-normalized .b 996 to 1861 864 to 1   fully sequenced,   864/864
(100 %)
35 diff
(96.0 %id)
AA919135 Kidney .b 1411 to 1905 495 to 1       495/495
(100 %)
4 diff
(99.2 %id)
AI332587 lung .b 1411 to 1903 493 to 1       493/493
(100 %)
2 diff
(99.6 %id)
AI394424 pooled .b 1411 to 1904 495 to 2       494/495
(99 %)
1 diff
(99.8 %id)
AW177634 colon .b 1445 to 1866 1 to 422       422/422
(100 %)
10 diff
(97.7 %id)
AI806111 pooled .b 1451 to 1904 456 to 2       455/456
(99 %)
0 diff
(100 %id)
BE833039 ovary .b 1468 to 1858 16 to 404       389/408
(95 %)
8 diff
(98.1 %id)
DB549991.
matches multiple genes
hippocampus .c-u 1 to 477 477 to 1   tiling clone, also hits gene C19orf66 477/477
(100 %)
1 diff
(99.8 %id)
DB558814 hypothalamus .c-u 3 to 453 450 to 1   tiling clone,   450/450
(100 %)
6 diff
(98.7 %id)
ES310223 scalp interfollicular dermis, skin .c-u 12 to 299 14 to 303       290/303
(95 %)
6 diff
(98.1 %id)
BI032336 nervous_normal .c-u 201 to 465 1 to 267       267/267
(100 %)
17 diff
(93.7 %id)
CU448763 epidermis .c-u 215 to 659 15 to 459 exact tiling clone,   445/474
(93 %)
2 diff
(99.6 %id)
CU450371 epidermis .c-u 215 to 659 15 to 460 S40P     446/475
(93 %)
3 diff
(99.4 %id)
CU450802 epidermis .c-u 215 to 659 15 to 460 S40P     446/475
(93 %)
4 diff
(99.2 %id)
D45688 lung .c-u 224 to 343 120 to 1       120/123
(97 %)
1 diff
(99.2 %id)
BF848700 lung_normal .c-u 231 to 522 1 to 290       290/290
(100 %)
8 diff
(97.3 %id)
BF847464 lung_normal .c-u 245 to 491 15 to 259       245/259
(94 %)
7 diff
(97.3 %id)
BG990374 head_neck .c-u 385 to 642 1 to 258       258/258
(100 %)
9 diff
(96.6 %id)
DA168997 amygdala .d 1 to 567 2 to 569 R46X A47G A48S A49S G50R ... tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC