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Gene CDK15TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
78 supporting clones for gene CDK15 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA759053   .a 3208 to 3563 356 to 1       356/356
(100 %)
0 diff
(100 %id)
AA375738 lung .d 247 to 568 1 to 333       328/350
(93 %)
6 diff
(98.3 %id)
AB053308 testis .c 101 to 1634 1 to 1534 exact tiling clone,   1534/1534
(100 %)
1 diff
(100.0 %id)
AK131512   .e 1 to 1827 2 to 1828 exact tiling clone, available from FLJ,   1828/1828
(100 %)
0 diff
(100 %id)
AK292434 testis .d 1 to 1711 2 to 1712 exact tiling clone,   1712/1712
(100 %)
1 diff
(100.0 %id)
AK310050 small intestine .g 1 to 1437 1 to 1437 exact tiling clone,   1437/1437
(100 %)
5 diff
(99.7 %id)
AX772791   .c 101 to 1634 1 to 1534 exact     1534/1534
(100 %)
1 diff
(100.0 %id)
BC038807 Brain, adult, 6 pooled whole brains .b 1 to 2233 1 to 2233 exact tiling clone, available from MGC, AAA   2233/2233
(100 %)
1 diff
(100.0 %id)
DA050598   .e 1 to 573 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB296231   .e 1275 to 1827 554 to 1       554/559
(99 %)
2 diff
(99.7 %id)
BQ694852 adipose .a 2280 to 2853 1 to 572       572/572
(100 %)
3 diff
(99.5 %id)
BX095314   .a 2556 to 3315 1 to 760   tiling clone,   760/760
(100 %)
0 diff
(100 %id)
BX283916 Kidney, renal cell adenocarcinoma .d 1034 to 1532 1 to 499       499/499
(100 %)
1 diff
(99.8 %id)
BX647394 human colon endothel primary cell culture .a 1 to 3622 1 to 3614 C14R S54P V303F S304P N305T ... tiling clone, available from DKFZ, AAA   3614/3614
(100 %)
14 diff
(99.7 %id)
CD636735   .d 128 to 525 397 to 1       397/397
(100 %)
1 diff
(99.8 %id)
CD636736   .d 128 to 527 1 to 400   tiling clone,   400/401
(99 %)
1 diff
(99.8 %id)
CD636737   .c 1 to 374 374 to 1   tiling clone,   374/374
(100 %)
0 diff
(100 %id)
CD636738   .c 1 to 375 1 to 373       373/374
(99 %)
3 diff
(99.2 %id)
CD636739   .d 607 to 1207 1 to 599       601/600
(100 %)
15 diff
(97.5 %id)
CD636740   .d 614 to 1207 591 to 1       591/598
(98 %)
3 diff
(99.5 %id)
CD636741   .d 607 to 1207 1 to 599       601/600
(100 %)
17 diff
(97.2 %id)
CD636742   .d 614 to 1205 596 to 2       595/603
(98 %)
6 diff
(99.1 %id)
CD636743   .d 900 to 1205 309 to 1       309/314
(98 %)
7 diff
(97.8 %id)
CD636744   .d 607 to 1145 1 to 538       538/538
(100 %)
11 diff
(98.0 %id)
CD636745   .d 614 to 1198 8 to 586       581/586
(99 %)
20 diff
(96.6 %id)
CD636746   .d 614 to 1205 593 to 2       592/601
(98 %)
2 diff
(99.7 %id)
CD636747   .d 607 to 1207 1 to 598       600/599
(100 %)
17 diff
(97.2 %id)
CD636748   .d 614 to 1207 595 to 1       595/602
(98 %)
4 diff
(99.4 %id)
CD636749   .d 619 to 1207 1 to 585       587/586
(100 %)
11 diff
(98.2 %id)
CD636750   .d 626 to 1207 580 to 1       580/587
(98 %)
4 diff
(99.4 %id)
CD636751   .d 607 to 1207 1 to 601       601/602
(99 %)
13 diff
(97.9 %id)
CD636752   .d 610 to 1207 598 to 1       598/598
(100 %)
4 diff
(99.4 %id)
CD636753   .d 607 to 1207 1 to 601       601/602
(99 %)
7 diff
(98.9 %id)
CD636754   .d 614 to 1207 593 to 1       593/600
(98 %)
2 diff
(99.7 %id)
CD636755   .d 607 to 1207 1 to 600       600/602
(99 %)
13 diff
(97.9 %id)
CD636756   .d 614 to 1207 591 to 1       591/598
(98 %)
7 diff
(98.9 %id)
CD636757   .d 607 to 1207 1 to 601       603/602
(100 %)
12 diff
(98.1 %id)
CD636758   .d 614 to 1203 589 to 1       589/596
(98 %)
4 diff
(99.4 %id)
CD636759   .d 614 to 1207 595 to 1       595/602
(98 %)
4 diff
(99.4 %id)
CD636760   .d 607 to 1207 1 to 600       600/601
(99 %)
8 diff
(98.7 %id)
EL734290 mixed .d 356 to 1029 1 to 674       674/674
(100 %)
0 diff
(100 %id)
ES315752 melanoma cell line .a 1510 to 1924 30 to 444       415/444
(93 %)
6 diff
(98.7 %id)
ES315756 melanoma cell line .a 3096 to 3559 34 to 498       465/499
(93 %)
7 diff
(98.6 %id)
ES315782 melanoma cell line .d 1392 to 1683 388 to 97     Submitted on the opposite strand 292/429
(68 %)
3 diff
(99.4 %id)
ES315805 melanoma cell line .a 1510 to 2043 92 to 629       538/629
(85 %)
6 diff
(99.1 %id)
ES315947 melanoma cell line .d 1392 to 1683 378 to 88     Submitted on the opposite strand 291/457
(63 %)
5 diff
(99.0 %id)
ES316010 melanoma cell line .a 2257 to 2556 368 to 68     Submitted on the opposite strand 301/368
(81 %)
0 diff
(100 %id)
ES316033 melanoma cell line .d 1392 to 1683 326 to 35     Submitted on the opposite strand 292/370
(78 %)
3 diff
(99.2 %id)
FN060238 breast carcinoma .a 2967 to 3086 123 to 3     Submitted on the opposite strand 121/123
(98 %)
0 diff
(100 %id)
DA551109   .i 1 to 513 2 to 514 exact tiling clone, capped   513/513
(100 %)
0 diff
(100 %id)
DB318304   .i 2395 to 2618 225 to 1   tiling clone,   225/225
(100 %)
4 diff
(98.3 %id)
DA575203   .j 1 to 569 2 to 570 exact tiling clone, capped   569/569
(100 %)
1 diff
(99.9 %id)
N67700 melanocyte .a 3233 to 3620 390 to 1       390/392
(99 %)
6 diff
(98.5 %id)
W03371 melanocyte .a 1885 to 2210 1 to 322   tiling clone,   322/322
(100 %)
2 diff
(99.4 %id)
AA435956.
matches multiple genes
  .i 251 to 674 428 to 5   tiling clone, also hits gene FER1L5 424/428
(99 %)
1 diff
(99.8 %id)
AA436054.
matches multiple genes
  .d 922 to 1402 1 to 481     also hits gene OTUD1 481/481
(100 %)
0 diff
(100 %id)
AA405329 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3247 to 3564 318 to 1       318/318
(100 %)
0 diff
(100 %id)
AA405146.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3131 to 3435 1 to 303     also hits gene suswerby 303/303
(100 %)
3 diff
(99.1 %id)
AI028242   .a 3005 to 3623 621 to 3   tiling clone,   619/621
(99 %)
0 diff
(100 %id)
AI276750 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2972 to 3414 443 to 1       443/443
(100 %)
0 diff
(100 %id)
AW665616 pooled .a 3144 to 3563 420 to 1       420/420
(100 %)
7 diff
(98.4 %id)
BE672851 Prostate .a 3137 to 3565 432 to 4       429/432
(99 %)
0 diff
(100 %id)
BE562611 endometrium, adenocarcinoma cell line, uterus .f 1 to 748 1 to 741 G8D L9F Q10K A11L A12P ... tiling clone,   741/766
(96 %)
10 diff
(98.7 %id)
BG249066 hypernephroma, cell line, Kidney .a 1497 to 2184 1 to 676   tiling clone,   676/932
(72 %)
27 diff
(97.2 %id)
BG326162 Kidney, renal cell adenocarcinoma .d 1034 to 1693 1 to 660       660/660
(100 %)
11 diff
(98.4 %id)
BG720115 testis .h 1 to 471 1 to 471 exact tiling clone,   471/471
(100 %)
10 diff
(97.9 %id)
BG772738 testis .h 1 to 471 1 to 468 exact tiling clone,   468/468
(100 %)
9 diff
(98.1 %id)
BI755983 brain .a 7 to 805 1 to 803   tiling clone,   803/804
(99 %)
16 diff
(98.1 %id)
TI_57221192   .a 7 to 805 71 to 873       803/874
(91 %)
21 diff
(97.6 %id)
DA660495   .d 459 to 1030 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
NM_139158.1   .c 101 to 1634 1 to 1534 exact RefSeq,   1534/1534
(100 %)
1 diff
(100.0 %id)
TI_1948208739   .d 355 to 963 136 to 744   fully sequenced,   609/744
(81 %)
6 diff
(99.2 %id)
TI_1948208740   .d 902 to 1400 625 to 127   fully sequenced,   499/625
(79 %)
0 diff
(100 %id)
TI_1948208909   .d 355 to 839 136 to 620   fully sequenced,   485/620
(78 %)
7 diff
(98.9 %id)
TI_1948208910   .d 778 to 1400 751 to 129   fully sequenced,   623/751
(82 %)
0 diff
(100 %id)
TI_1948209076   .d 355 to 839 133 to 617   fully sequenced,   485/617
(78 %)
6 diff
(99.1 %id)
TI_1948209077   .d 778 to 1400 750 to 128   fully sequenced,   623/750
(83 %)
1 diff
(99.9 %id)
TI_1948209243   .d 355 to 963 131 to 738   fully sequenced,   608/738
(82 %)
7 diff
(99.1 %id)
TI_1948209244   .d 902 to 1400 627 to 129   fully sequenced,   499/627
(79 %)
0 diff
(100 %id)
DR007207 testis .g 520 to 1254 1 to 736       736/736
(100 %)
7 diff
(99.1 %id)
DB067342 testis .d 1 to 461 2 to 463   capped   462/462
(100 %)
2 diff
(99.6 %id)
DB280026 uterus .k 1 to 543 2 to 544 exact tiling clone, capped   543/543
(100 %)
1 diff
(99.9 %id)
AK091710   .d 355 to 839 133 to 617   available from FLJ, Suspected internal deletion, this clone was ignored 485/617
(78 %)
6 diff
(99.1 %id)
ES315810 melanoma cell line .d 778 to 1400 750 to 128     Submitted on the opposite strand, submitted on the opposite strand 623/750
(83 %)
1 diff
(99.9 %id)
DA930658 small intestine .d 355 to 963 131 to 738   capped This clone was ignored 608/738
(82 %)
7 diff
(99.1 %id)
DB332303 small intestine .d 902 to 1400 627 to 129     This clone was ignored 499/627
(79 %)
0 diff
(100 %id)
DR007207 testis .g 520 to 1254 1 to 736       736/736
(100 %)
7 diff
(99.1 %id)
DB067342 testis .d 1 to 461 2 to 463   capped   462/462
(100 %)
2 diff
(99.6 %id)
DB280026 uterus .k 1 to 543 2 to 544 exact tiling clone, capped   543/543
(100 %)
1 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI