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Gene ALOXE3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
40 supporting clones for gene ALOXE3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA102053 cerebellum .a 1 to 554 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
DA240490 brain .a 14 to 601 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
AJ269499   .a 25 to 3386 1 to 3362   tiling clone,   3362/3362
(100 %)
6 diff
(99.9 %id)
DB298748.
matches multiple genes
cerebellum .a 2824 to 3385 562 to 1     also hits gene nesuya 562/562
(100 %)
1 diff
(99.9 %id)
BM714205 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2848 to 3384 1 to 537   fully sequenced,   537/537
(100 %)
0 diff
(100 %id)
AW300461 Kidney .a 3016 to 3385 370 to 1       370/381
(97 %)
2 diff
(99.5 %id)
BG959287 colon .a 3162 to 3326 165 to 2       164/165
(99 %)
0 diff
(100 %id)
BM676593 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3309 to 3391 95 to 13   fully sequenced,   83/95
(87 %)
5 diff
(94.8 %id)
DC325204 brain .b 1 to 588 1 to 588   tiling clone,   588/588
(100 %)
0 diff
(100 %id)
NM_001165960.1   .b 132 to 3527 1 to 3396 exact RefSeq, AAA   3396/3396
(100 %)
0 diff
(100 %id)
DC376381 brain .b 132 to 659 1 to 529       529/530
(99 %)
4 diff
(99.3 %id)
DC329623 corpus callosum .b 162 to 734 1 to 574       574/574
(100 %)
2 diff
(99.7 %id)
DC376499 brain .b 189 to 655 1 to 467       467/467
(100 %)
1 diff
(99.8 %id)
DC372335   .b 196 to 598 1 to 403       403/408
(98 %)
1 diff
(99.8 %id)
DC420923 uterus .b 212 to 770 1 to 559       559/559
(100 %)
0 diff
(100 %id)
AK296416 thalamus .b 231 to 3053 1 to 2823 exact     2823/2823
(100 %)
1 diff
(100.0 %id)
DC343235 thalamus .b 231 to 770 1 to 540       540/540
(100 %)
0 diff
(100 %id)
AK292732 kidney, tumor tissue .b 393 to 2913 1 to 2521       2521/2521
(100 %)
3 diff
(99.9 %id)
DB175339 kidney, tumor tissue .b 394 to 964 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
BC101938 PCR rescued clones .b 444 to 3035 1 to 2592   tiling clone,   2592/2592
(100 %)
0 diff
(100 %id)
BC101939 PCR rescued clones .b 444 to 3035 1 to 2592       2592/2592
(100 %)
1 diff
(100.0 %id)
BC103508 PCR rescued clones .b 444 to 3035 1 to 2592       2592/2592
(100 %)
0 diff
(100 %id)
BC104724 PCR rescued clones .b 444 to 3035 1 to 2592       2592/2592
(100 %)
0 diff
(100 %id)
AF182218   .b 465 to 3527 1 to 3063   tiling clone, AAA   3063/3063
(100 %)
6 diff
(99.9 %id)
DA086865 cerebellum .b 467 to 1035 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA805037 brain .b 493 to 961 2 to 470   capped   469/469
(100 %)
0 diff
(100 %id)
BQ367813 placenta_normal .b 812 to 1070 17 to 275       264/275
(96 %)
7 diff
(97.5 %id)
BG183900   .b 2624 to 3416 53 to 835       783/839
(93 %)
62 diff
(92.7 %id)
BQ300190 bladder_tumor .b 2635 to 3101 8 to 471       464/471
(98 %)
6 diff
(98.8 %id)
DC426961 uterus .b 3332 to 3527 196 to 1       196/196
(100 %)
0 diff
(100 %id)
NM_021628.2   .c 1 to 3231 2 to 3232   RefSeq, AAA   3232/3232
(100 %)
0 diff
(100 %id)
DA183156 amygdala .c 1 to 564 2 to 567   tiling clone, capped   566/566
(100 %)
2 diff
(99.7 %id)
AK122822 cerebellum .c 22 to 3231 465 to 3674 I378L tiling clone, available from FLJ,   3210/3674
(87 %)
7 diff
(99.9 %id)
DA861798 placenta .c 29 to 595 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
AK313677 thalamus .c 36 to 2505 1 to 2470   tiling clone,   2470/2470
(100 %)
0 diff
(100 %id)
DA398848 thalamus .c 37 to 599 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
AK299742 brain .d 1 to 1845 1 to 1845 P11L tiling clone,   1845/1845
(100 %)
1 diff
(100.0 %id)
CU451106 epidermis .e 1 to 751 763 to 13 M14V R82W tiling clone, Submitted on the opposite strand 751/763
(98 %)
2 diff
(99.8 %id)
AW003512 pooled germ cell tumors .f 1 to 647 652 to 6 A8G I9H E10* tiling clone,   647/652
(99 %)
7 diff
(99.0 %id)
AW593980 pooled germ cell tumors .f 88 to 647 562 to 6       557/562
(99 %)
11 diff
(98.1 %id)
AW613990 pooled germ cell tumors .f 160 to 647 493 to 6   tiling clone,   488/493
(98 %)
0 diff
(100 %id)
AX721053   Gene ALOXE3, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC