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Gene ALLCTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
28 supporting clones for gene ALLC back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK302299 testis .a 1 to 1441 2 to 1442 exact tiling clone,   1442/1442
(100 %)
0 diff
(100 %id)
NM_018436.3   .a 1 to 1441 2 to 1442 exact RefSeq, AAA   1442/1442
(100 %)
0 diff
(100 %id)
DB054905 testis .a 1 to 564 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
TI_57170370   .a 23 to 889 66 to 929       864/929
(93 %)
14 diff
(98.5 %id)
BC029652 Brain, adult medulla .a 24 to 1441 1 to 1415 T110I E303A A304V V305I I306R ... tiling clone, available from MGC, AAA   1415/1415
(100 %)
3 diff
(99.8 %id)
BX280147 brain, medulla .a 24 to 553 1 to 530       530/530
(100 %)
2 diff
(99.7 %id)
BI825480 brain, medulla .a 24 to 889 1 to 863       863/863
(100 %)
9 diff
(99.0 %id)
TI_1948093083   .a 97 to 713 121 to 737   fully sequenced,   617/737
(83 %)
7 diff
(99.1 %id)
TI_1948093231   .a 97 to 764 119 to 785   fully sequenced,   667/785
(84 %)
7 diff
(99.2 %id)
TI_1948093389   .a 97 to 702 119 to 725   fully sequenced,   607/725
(83 %)
8 diff
(98.9 %id)
AF395820   .a 204 to 1219 1 to 1013       1013/1013
(100 %)
3 diff
(99.8 %id)
TI_1948093390   .a 641 to 1341 815 to 116   fully sequenced,   700/815
(85 %)
3 diff
(99.7 %id)
TI_151731478   .a 669 to 1441 860 to 94   AAA   767/941
(81 %)
7 diff
(99.3 %id)
TI_1948093084   .a 683 to 1341 772 to 117   fully sequenced,   656/772
(84 %)
1 diff
(99.9 %id)
TI_1948093232   .a 734 to 1341 723 to 119   fully sequenced,   605/723
(83 %)
1 diff
(99.9 %id)
BX096226   .a 852 to 1441 1 to 587   AAA   587/587
(100 %)
1 diff
(99.9 %id)
AA421584   .a 852 to 1166 1 to 311   fully sequenced,   311/311
(100 %)
1 diff
(99.7 %id)
AW886703 ovary .a 884 to 1265 1 to 376       376/376
(100 %)
9 diff
(97.7 %id)
BE465476 Kidney .a 923 to 1441 516 to 1       516/516
(100 %)
1 diff
(99.9 %id)
AA402997   .a 1064 to 1135 1 to 72   fully sequenced,   72/72
(100 %)
0 diff
(100 %id)
AI910694 Kidney .a 1076 to 1442 364 to 1       364/364
(100 %)
3 diff
(99.2 %id)
AA412027   .a 1105 to 1444 337 to 2   fully sequenced,   336/337
(99 %)
0 diff
(100 %id)
AA469952   .a 1105 to 1444 338 to 2   fully sequenced,   337/338
(99 %)
0 diff
(100 %id)
AA708163 liver and spleen .a 1106 to 1439 333 to 1       333/333
(100 %)
5 diff
(98.5 %id)
AI948860 pooled germ cell tumors .a 1118 to 1441 348 to 25   AAA   324/324
(100 %)
2 diff
(99.4 %id)
AI627963 Kidney .a 1134 to 1441 339 to 32   AAA   308/315
(97 %)
10 diff
(96.9 %id)
BQ000277 Fibrosarcoma .a 1222 to 1441 236 to 17   AAA   220/223
(98 %)
1 diff
(99.6 %id)
BQ189212 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1 to 545 1 to 542   tiling clone, fully sequenced,   542/542
(100 %)
1 diff
(99.9 %id)
CK299381 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 484 to 945 474 to 17   tiling clone, fully sequenced, AAA   458/458
(100 %)
4 diff
(99.2 %id)
BI832436 brain, medulla .c 1 to 640 21 to 657   tiling clone, available from MGC,   637/657
(96 %)
6 diff
(99.1 %id)
TI_57175518   .c 1 to 640 21 to 657       637/657
(96 %)
6 diff
(99.1 %id)
BC035356 Brain, adult medulla .c 5 to 1870 1 to 1866 exact tiling clone, available from MGC, AAA   1866/1866
(100 %)
0 diff
(100 %id)
AF215924 fetal spleen .c 107 to 1870 9 to 1769 E74A A75V V76I I77R R78Q ... AAA   1761/1761
(100 %)
1 diff
(100.0 %id)
BP371512 testis Gene ALLC, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C