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Gene SEC14L5andALG1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
510 supporting clones for gene SEC14L5andALG1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AB007880 brain .a 1 to 6453 1 to 6453 exact tiling clone, available from KIAA,   6453/6453
(100 %)
8 diff
(99.9 %id)
NM_014692.1   .a 1 to 6456 1 to 6456 exact RefSeq,   6456/6456
(100 %)
0 diff
(100 %id)
DA298024 hippocampus .a 28 to 568 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB499099 hypothalamus .a 611 to 1099 1 to 489       489/492
(99 %)
3 diff
(99.4 %id)
DA304529 hippocampus .a 1162 to 1632 2 to 472   capped   471/471
(100 %)
1 diff
(99.8 %id)
TI_45211974   .a 2262 to 3111 68 to 923       856/925
(92 %)
6 diff
(99.4 %id)
TI_45214146   .a 2262 to 3031 110 to 878       769/878
(87 %)
6 diff
(99.4 %id)
BG705819 brain, hypothalamus .a 2277 to 2999 1 to 723       723/723
(100 %)
7 diff
(99.1 %id)
BI600140 brain, hypothalamus .a 2277 to 3111 1 to 841       841/843
(99 %)
18 diff
(97.9 %id)
BI601418 brain, hypothalamus .a 2277 to 3031 1 to 754   available from MGC,   754/754
(100 %)
10 diff
(98.7 %id)
DB495394 hypothalamus .a 2282 to 2782 1 to 501       501/501
(100 %)
2 diff
(99.7 %id)
BC045685 Brain, hypothalamus .a 2282 to 5643 1 to 3362   available from MGC, AAA   3362/3362
(100 %)
8 diff
(99.8 %id)
N27514 melanocyte .a 3084 to 3568 1 to 488       488/489
(99 %)
5 diff
(99.0 %id)
DA298461 hippocampus .a 3189 to 3771 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DB485726 hypothalamus .a 3402 to 3829 1 to 428   tiling clone,   428/436
(98 %)
15 diff
(96.6 %id)
DA402208 thalamus .a 3474 to 4017 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
N21235 melanocyte .a 3615 to 4192 565 to 1       565/565
(100 %)
19 diff
(96.7 %id)
R73267 breast .a 3670 to 4076 1 to 411       411/417
(98 %)
9 diff
(97.9 %id)
H42963 breast .a 3670 to 4127 1 to 470   fully sequenced,   470/470
(100 %)
17 diff
(96.4 %id)
AA774938 schizophrenic brain S-11 frontal lobe .a 3688 to 3830 142 to 1       142/142
(100 %)
1 diff
(99.3 %id)
AI371094 brain, glioblastoma (pooled) .a 3746 to 4197 452 to 1       452/452
(100 %)
0 diff
(100 %id)
AW051024 brain, glioblastoma (pooled) .a 3966 to 4197 233 to 1       233/233
(100 %)
1 diff
(99.6 %id)
H42894 breast .a 3974 to 4155 182 to 1   fully sequenced,   182/182
(100 %)
0 diff
(100 %id)
DA293522 hippocampus .a 4003 to 4543 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA250909 caudate nucleus .a 4172 to 4752 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
CK004844 brain/CNS, Human Brain - Frontal Cortex .a 4194 to 4805 1 to 612       612/612
(100 %)
1 diff
(99.9 %id)
DA153694 amygdala .a 4252 to 4828 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
DA352232 substantia nigra .a 4306 to 4877 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA344884 substantia nigra .a 4325 to 4892 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
AW006586 Prostate .a 4643 to 5150 511 to 3       509/511
(99 %)
0 diff
(100 %id)
DA133489 alzheimer cortex .a 4752 to 5314 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA139054 alzheimer cortex .a 4809 to 5337 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
AA365896 pineal body .a 4838 to 5148 1 to 312       312/312
(100 %)
2 diff
(99.4 %id)
AW955733   .a 4839 to 5557 1 to 720       720/723
(99 %)
8 diff
(98.9 %id)
R50908 whole brain .a 4867 to 5275 1 to 417       417/423
(98 %)
13 diff
(97.0 %id)
DB566450 hypothalamus .a 5201 to 5641 1 to 441   tiling clone, Submitted on the opposite strand 441/443
(99 %)
1 diff
(99.8 %id)
N80421 multiple sclerosis lesions .a 5417 to 5882 1 to 476   tiling clone,   476/476
(100 %)
13 diff
(97.3 %id)
BF967596 brain, hypothalamus .a 5795 to 6422 655 to 17   tiling clone,   639/1004
(63 %)
0 diff
(100 %id)
BM716453 eye, lens .a 5848 to 6217 1 to 370   fully sequenced,   370/370
(100 %)
4 diff
(99.0 %id)
TI_151794580   .a 5848 to 6456 106 to 715   tiling clone,   610/616
(99 %)
9 diff
(98.6 %id)
BF516277   .a 5917 to 6456 557 to 18   tiling clone, AAA   540/540
(100 %)
2 diff
(99.7 %id)
DB554751 hypothalamus .a 6013 to 6455 1 to 447     Submitted on the opposite strand 447/449
(99 %)
10 diff
(97.8 %id)
AW027856 brain, glioblastoma (pooled) .a 6066 to 6459 414 to 20   AAA   395/395
(100 %)
9 diff
(97.8 %id)
R50790 whole brain .a 6083 to 6455 407 to 19   AAA   389/439
(88 %)
16 diff
(96.4 %id)
DB570202 hypothalamus .a 6151 to 6452 1 to 302     Submitted on the opposite strand 302/303
(99 %)
2 diff
(99.4 %id)
BU735226 eye, lens .a 6187 to 6455 287 to 19   fully sequenced, AAA   269/269
(100 %)
1 diff
(99.7 %id)
AW023560 cochlea, ear .a 6189 to 6457 8 to 276   AAA   269/276
(97 %)
6 diff
(97.9 %id)
BQ028144 mixed .a 6214 to 6453 8 to 247   AAA Submitted on the opposite strand 240/247
(97 %)
6 diff
(97.6 %id)
DA735358   .b 1 to 703 2 to 705   capped   704/704
(100 %)
4 diff
(99.5 %id)
DA735395   .b 1 to 722 2 to 722   tiling clone, capped   721/721
(100 %)
1 diff
(99.9 %id)
DB367598   .b 1575 to 1812 238 to 1   tiling clone,   238/254
(93 %)
5 diff
(98.1 %id)
DB367650   .b 1583 to 1812 230 to 1       230/238
(96 %)
2 diff
(99.2 %id)
AK075373   .c -10 to 1920 1 to 1931 exact     1931/1931
(100 %)
6 diff
(99.7 %id)
DB456471.
matches multiple genes
testis .c -10 to 481 1 to 492     also hits gene FAM86A 492/492
(100 %)
9 diff
(98.2 %id)
BM767933 Ascites, stomach .c -10 to 525 1 to 536       536/536
(100 %)
0 diff
(100 %id)
DA326638 hippocampus .c -9 to 543 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA732471   .c -9 to 561 2 to 572   capped   571/674
(84 %)
9 diff
(98.7 %id)
DA259509 caudate nucleus .c -8 to 536 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DA385000 thalamus .c 1 to 561 10 to 570   capped   569/569
(100 %)
4 diff
(99.3 %id)
BP302187   .c 1 to 575 9 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA646339 mammary gland .c 1 to 799 9 to 809   capped   808/808
(100 %)
6 diff
(99.3 %id)
DA729963   .c 1 to 650 8 to 658   capped   657/685
(95 %)
6 diff
(99.2 %id)
BP204781 coronary artery .c 1 to 576 6 to 581       581/581
(100 %)
0 diff
(100 %id)
BP205820 coronary artery .c 1 to 473 6 to 484       484/632
(76 %)
12 diff
(98.2 %id)
BP241639 Liver .c 1 to 566 6 to 571       571/578
(98 %)
12 diff
(98.0 %id)
AU280655   .c 1 to 542 6 to 548       548/548
(100 %)
2 diff
(99.7 %id)
DA749098   .c 1 to 566 7 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
BM769578 stomach .c 1 to 456 6 to 463       463/463
(100 %)
3 diff
(99.4 %id)
BP356748 mammary gland .c 1 to 577 6 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DB033986 testis .c 1 to 529 36 to 565   capped   535/564
(94 %)
6 diff
(99.0 %id)
DA011450 adrenal gland .c 1 to 556 6 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA150594 amygdala .c 1 to 581 6 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
DA166738 amygdala .c 1 to 541 6 to 550   capped   549/549
(100 %)
4 diff
(99.3 %id)
DA201674 brain .c 1 to 619 6 to 627   capped   626/626
(100 %)
3 diff
(99.6 %id)
DA204051 brain .c 1 to 575 6 to 583   capped   582/582
(100 %)
3 diff
(99.5 %id)
DA206079 brain .c 1 to 544 6 to 551   capped   550/550
(100 %)
3 diff
(99.5 %id)
DA308048 hippocampus .c 1 to 564 6 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA379203 thalamus .c 1 to 553 6 to 564   capped   563/563
(100 %)
6 diff
(99.0 %id)
DA422279 cervix .c 1 to 565 6 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA493980 brain .c 1 to 536 6 to 543   capped   542/542
(100 %)
2 diff
(99.7 %id)
DA538848 Kidney .c 1 to 570 6 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA562252 heart .c 1 to 575 6 to 581   capped   580/580
(100 %)
3 diff
(99.5 %id)
DA632654 Kidney .c 1 to 536 6 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA635378 Kidney .c 1 to 560 6 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DA685721   .c 1 to 529 6 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DA697367   .c 1 to 564 6 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA710490   .c 1 to 548 6 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DA733387.
matches multiple genes
  .c 1 to 449 6 to 453   capped also hits gene LOC100132066 452/452
(100 %)
7 diff
(98.5 %id)
DA734053   .c 1 to 552 6 to 557   capped   556/556
(100 %)
8 diff
(98.6 %id)
DA836057 placenta .c 1 to 551 6 to 559   capped   558/558
(100 %)
3 diff
(99.5 %id)
DA842590 placenta .c 1 to 314 6 to 319   capped   318/318
(100 %)
0 diff
(100 %id)
DA877922 Prostate .c 1 to 556 6 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA906315   .c 1 to 536 6 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA910884   .c 1 to 556 6 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA951909 Spleen .c 1 to 548 6 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB009425 colon, tumor tissue .c 1 to 536 6 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB037555 testis .c 1 to 539 6 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DB066213 testis .c 1 to 520 6 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
DB174243 kidney, tumor tissue .c 1 to 555 6 to 574   capped   573/573
(100 %)
12 diff
(98.0 %id)
DB250666 uterus .c 1 to 583 6 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA014169 adrenal gland .c 1 to 561 5 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BP298394   .c 1 to 561 4 to 563       563/586
(96 %)
9 diff
(98.5 %id)
BM791409 stomach .c 1 to 617 4 to 620       620/620
(100 %)
0 diff
(100 %id)
DA379167 thalamus .c 1 to 574 4 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA707469   .c 1 to 567 4 to 575   capped   574/574
(100 %)
5 diff
(99.2 %id)
DA839867 placenta .c 1 to 567 4 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
DA896659 skeletal muscle .c 1 to 549 4 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA978495 synovial membrane tissue from rheumatioidarthritis .c 1 to 577 4 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DB003623 breast, tumor tissue .c 1 to 544 4 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BP381504 adipose tissue .c 1 to 612 12 to 623       613/623
(98 %)
7 diff
(98.9 %id)
DA567392   .c 1 to 543 3 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
BP238684 Liver .c 1 to 608 2 to 610       610/610
(100 %)
4 diff
(99.4 %id)
BP253329 Kidney .c 1 to 578 2 to 579       579/582
(99 %)
3 diff
(99.5 %id)
BP257070 Kidney .c 1 to 581 2 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP373825 umbilical cord .c 1 to 585 2 to 583       583/583
(100 %)
5 diff
(99.2 %id)
BC031095 Brain, hippocampus .c 1 to 2118 1 to 2120 L325M Q455R tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 2120/2122
(99 %)
5 diff
(99.8 %id)
DA243799 brain .c 1 to 569 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA282884 corpus callosum .c 1 to 550 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA542538 lung .c 1 to 573 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
CB124924 Liver .c 1 to 554 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DA699744   .c 1 to 477 2 to 479   capped   478/478
(100 %)
2 diff
(99.6 %id)
DA728786   .c 1 to 762 2 to 772   capped   771/795
(96 %)
24 diff
(97.0 %id)
DA741313   .c 1 to 504 2 to 505   capped   504/504
(100 %)
1 diff
(99.9 %id)
DA848657 placenta .c 1 to 567 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB026972 testis .c 1 to 550 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA011277 adrenal gland .c 2 to 559 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA470788   .c 2 to 563 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA585173 lung .c 2 to 534 2 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
DA705268   .c 2 to 468 2 to 468   capped   467/467
(100 %)
0 diff
(100 %id)
DA737446   .c 2 to 760 2 to 762   capped   761/766
(99 %)
5 diff
(99.4 %id)
DA829473 placenta .c 2 to 759 2 to 764   capped   761/790
(96 %)
12 diff
(98.5 %id)
DA836525 placenta .c 2 to 541 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA885201   .c 2 to 569 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA911501   .c 2 to 564 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA964801 stomach .c 2 to 547 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB002495 breast, tumor tissue .c 2 to 526 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DB451581.
matches multiple genes
testis .c 3 to 494 1 to 492     also hits gene FAM86A 492/492
(100 %)
1 diff
(99.8 %id)
DA813481   .c 3 to 536 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
BP253428 Kidney .c 4 to 585 1 to 582       582/583
(99 %)
1 diff
(99.9 %id)
BG720304 testis .c 4 to 623 1 to 622       622/622
(100 %)
10 diff
(98.4 %id)
DA871312 Prostate .c 4 to 552 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA478516   .c 5 to 562 2 to 562   capped   561/561
(100 %)
4 diff
(99.3 %id)
BI824272 pooled brain, lung, testis .c 5 to 698 1 to 703       701/703
(99 %)
14 diff
(98.1 %id)
TI_57202355   .c 5 to 698 34 to 736       700/736
(95 %)
19 diff
(97.5 %id)
DA701094   .c 5 to 525 2 to 523   capped   522/522
(100 %)
2 diff
(99.7 %id)
DB181772 liver, tumor tissue .c 5 to 560 2 to 561   capped   560/560
(100 %)
4 diff
(99.3 %id)
AA675921   .c 6 to 811 1 to 801   fully sequenced,   801/801
(100 %)
6 diff
(99.3 %id)
AB019038   .c 6 to 1862 1 to 1857 exact tiling clone,   1857/1857
(100 %)
1 diff
(100.0 %id)
CR597195 Neuroblastoma Cot 25-normalized .c 6 to 1530 1 to 1525 exact     1525/1525
(100 %)
0 diff
(100 %id)
BX394779 Neuroblastoma Cot 25-normalized .c 6 to 791 1 to 786   fully sequenced,   786/786
(100 %)
0 diff
(100 %id)
BI461678 testis .c 6 to 609 1 to 600       600/600
(100 %)
9 diff
(98.5 %id)
BX956535   .c 7 to 255 1 to 248       248/248
(100 %)
5 diff
(98.0 %id)
BE262438 brain, neuroblastoma .c 8 to 790 32 to 815       784/816
(96 %)
13 diff
(98.5 %id)
BG470088 adenocarcinoma cell line, colon .c 9 to 409 1 to 410       410/901
(45 %)
17 diff
(98.2 %id)
BI464948 testis .c 9 to 866 1 to 862       862/909
(94 %)
42 diff
(95.4 %id)
CD110151 placenta, pre-eclamptic placenta .c 9 to 831 28 to 859       832/860
(96 %)
23 diff
(97.4 %id)
CB993327 placenta, pre-eclamptic placenta .c 9 to 777 28 to 797       770/798
(96 %)
9 diff
(98.9 %id)
AL555467 placenta .c 10 to 975 1 to 965       965/965
(100 %)
1 diff
(99.9 %id)
BI771986 pooled lung and spleen .c 10 to 773 1 to 756       758/756
(100 %)
14 diff
(98.2 %id)
CX754077 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 10 to 650 37 to 672     Submitted on the opposite strand 636/767
(82 %)
14 diff
(98.2 %id)
TI_57182349   .c 10 to 773 28 to 783       758/783
(96 %)
13 diff
(98.4 %id)
AL522335 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 11 to 756 21 to 766       746/766
(97 %)
6 diff
(99.3 %id)
BM559894 brain, medulla .c 11 to 881 15 to 894       880/1079
(81 %)
22 diff
(98.0 %id)
CA487437   .c 11 to 643 1 to 634       634/981
(64 %)
15 diff
(98.5 %id)
BC004402 Brain, neuroblastoma .c 13 to 1570 1 to 1560 S267N available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 1560/1560
(100 %)
2 diff
(99.9 %id)
DA554894   .c 13 to 550 13 to 551   capped   539/539
(100 %)
2 diff
(99.7 %id)
BP296055   .c 13 to 594 1 to 582       582/582
(100 %)
6 diff
(99.0 %id)
BP323579 Pancreas .c 13 to 373 1 to 360       360/581
(61 %)
6 diff
(99.0 %id)
DA033140   .c 14 to 536 2 to 525   capped   524/524
(100 %)
3 diff
(99.5 %id)
DA260847 caudate nucleus .c 14 to 573 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BP213053 cerebrum .c 14 to 582 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
CD051199 embryonic trophoblasts, made from WA01 stemcells .c 14 to 855 23 to 870       848/907
(93 %)
17 diff
(98.2 %id)
DA420991 cervix .c 14 to 576 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA553438   .c 14 to 582 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
BP243117 Liver .c 14 to 578 1 to 565       565/565
(100 %)
11 diff
(98.1 %id)
BP252178 Kidney .c 14 to 593 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP254210 Kidney .c 14 to 594 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA601098   .c 14 to 333 2 to 321   capped   320/320
(100 %)
1 diff
(99.7 %id)
BG774999 carcinoma, cell line, Prostate .c 14 to 778 1 to 766   fully sequenced,   766/766
(100 %)
4 diff
(99.5 %id)
CB108493 Liver .c 14 to 453 1 to 440       440/440
(100 %)
0 diff
(100 %id)
DA646978 mammary gland .c 14 to 718 2 to 708   capped   707/707
(100 %)
2 diff
(99.8 %id)
BP297981   .c 14 to 585 1 to 571       571/571
(100 %)
2 diff
(99.7 %id)
BP299634   .c 14 to 595 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DA691900   .c 14 to 580 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
DA698576   .c 14 to 555 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
BM847470 myeloma .c 14 to 525 1 to 512       512/512
(100 %)
1 diff
(99.9 %id)
TI_1948080239   .c 14 to 680 123 to 791   fully sequenced,   669/791
(84 %)
6 diff
(99.3 %id)
TI_1948080410   .c 14 to 720 123 to 829   fully sequenced,   707/829
(85 %)
7 diff
(99.2 %id)
TI_1948080753   .c 14 to 714 127 to 831   fully sequenced,   705/831
(84 %)
15 diff
(98.2 %id)
DB002004 breast, tumor tissue .c 14 to 526 2 to 514   capped   513/513
(100 %)
1 diff
(99.9 %id)
BP370116 testis .c 14 to 595 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DA013933 adrenal gland .c 15 to 588 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA048958   .c 15 to 571 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA077236 cerebellum .c 15 to 586 2 to 574   capped   573/573
(100 %)
3 diff
(99.5 %id)
DA084755 cerebellum .c 15 to 526 2 to 513   capped   512/512
(100 %)
0 diff
(100 %id)
DA086392 cerebellum .c 15 to 577 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA086426 cerebellum .c 15 to 570 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA120165 cerebellum .c 15 to 552 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA130239 alzheimer cortex .c 15 to 564 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA176644 amygdala .c 15 to 538 2 to 526   capped   525/525
(100 %)
1 diff
(99.9 %id)
DA262637 caudate nucleus .c 15 to 579 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA267320 caudate nucleus .c 15 to 577 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA271493 caudate nucleus .c 15 to 519 2 to 506   capped   505/505
(100 %)
0 diff
(100 %id)
DA288062 corpus callosum .c 15 to 566 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA300863 hippocampus .c 15 to 584 2 to 571   capped   570/571
(99 %)
1 diff
(99.9 %id)
DA337923 hippocampus .c 15 to 585 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA381100 thalamus .c 15 to 536 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
DA383233 thalamus .c 15 to 471 2 to 461   capped   460/460
(100 %)
3 diff
(99.4 %id)
DA384091 thalamus .c 15 to 577 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA396470 thalamus .c 15 to 600 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA419080 cord Blood .c 15 to 759 2 to 758   capped   757/795
(95 %)
13 diff
(98.4 %id)
DA452764 tongue, tumor tissue .c 15 to 622 2 to 609   capped   608/608
(100 %)
0 diff
(100 %id)
DA551183   .c 15 to 517 2 to 507   capped   506/506
(100 %)
3 diff
(99.5 %id)
DA586199 lung .c 15 to 608 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA599625   .c 15 to 580 2 to 570   capped   569/569
(100 %)
4 diff
(99.3 %id)
BG437398 large cell carcinoma, lung .c 15 to 865 1 to 846       846/848
(99 %)
35 diff
(95.9 %id)
DA613521   .c 15 to 597 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DA646830 mammary gland .c 15 to 799 2 to 790   capped   789/789
(100 %)
8 diff
(99.0 %id)
DA665149   .c 15 to 542 2 to 532   capped   531/531
(100 %)
3 diff
(99.5 %id)
DA679077   .c 15 to 542 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DA680729 ovary .c 15 to 561 2 to 549   capped   548/552
(99 %)
2 diff
(99.7 %id)
DA685140   .c 15 to 559 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA693012   .c 15 to 561 2 to 548   capped   547/551
(99 %)
2 diff
(99.7 %id)
DA701513   .c 15 to 542 2 to 530   capped   529/529
(100 %)
2 diff
(99.7 %id)
DA839131 placenta .c 15 to 569 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA849237 placenta .c 15 to 592 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA910621   .c 15 to 578 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA914706   .c 15 to 576 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA916664 small intestine .c 15 to 315 2 to 305   capped   304/304
(100 %)
3 diff
(99.1 %id)
DA929844 small intestine .c 15 to 593 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA983468 synovial membrane tissue from rheumatioidarthritis .c 15 to 567 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA987378 synovial membrane tissue from rheumatioidarthritis .c 15 to 582 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB002186 breast, tumor tissue .c 15 to 563 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB010562 colon, tumor tissue .c 15 to 536 2 to 524   capped   523/523
(100 %)
1 diff
(99.9 %id)
DB013180 esophageal, tumor tissue .c 15 to 536 2 to 525   capped   524/524
(100 %)
2 diff
(99.7 %id)
DB013996 esophageal, tumor tissue .c 15 to 590 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DB047868 testis .c 15 to 573 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
DB051640 testis .c 15 to 576 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB110478 thymus .c 15 to 602 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DB116565 thymus .c 15 to 536 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
DB124957 thymus .c 15 to 581 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DB175195 kidney, tumor tissue .c 15 to 576 2 to 570   capped   569/569
(100 %)
7 diff
(98.8 %id)
DB189872 lung, tumor tissue .c 15 to 450 2 to 437   capped   436/443
(98 %)
2 diff
(99.6 %id)
DB211641 trachea .c 15 to 544 2 to 530   capped   529/529
(100 %)
2 diff
(99.7 %id)
DB218801 trachea .c 15 to 573 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB269102 uterus .c 15 to 565 2 to 553   capped   552/553
(99 %)
5 diff
(99.1 %id)
DB477462 hippocampus .c 17 to 508 1 to 492       492/492
(100 %)
2 diff
(99.6 %id)
DB483031 hippocampus .c 17 to 503 1 to 487       487/487
(100 %)
1 diff
(99.8 %id)
BM801720 duodenal adenocarcinoma, cell line, small intestine .c 17 to 856 1 to 846       846/878
(96 %)
15 diff
(98.3 %id)
DA548443   .c 18 to 504 2 to 488   capped   487/487
(100 %)
0 diff
(100 %id)
BP254274 Kidney .c 18 to 597 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
BP256240 Kidney .c 18 to 600 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BM685638 eye, RPE and Choroid .c 18 to 649 1 to 630     Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 630/645
(97 %)
14 diff
(97.9 %id)
DA030473   .c 19 to 591 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA037521   .c 19 to 572 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA169848 amygdala .c 19 to 598 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA374254 thalamus .c 19 to 555 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
BP252045 Kidney .c 19 to 586 8 to 575       568/575
(98 %)
6 diff
(99.0 %id)
DA694306   .c 19 to 561 2 to 546   capped   545/547
(99 %)
6 diff
(99.0 %id)
DA906801   .c 19 to 593 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
AY359073   .c 20 to 1577 25 to 1582 exact AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 1558/1582
(98 %)
7 diff
(99.6 %id)
AL539861 brain, fetal brain .c 20 to 973 1 to 954       954/954
(100 %)
1 diff
(99.9 %id)
BX378875 Placenta Cot 25-normalized .c 20 to 807 1 to 788       788/788
(100 %)
0 diff
(100 %id)
DA487990 brain .c 20 to 569 8 to 558   capped   551/551
(100 %)
1 diff
(99.9 %id)
DB445369.
matches multiple genes
testis .c 20 to 446 1 to 428     also hits gene FAM86A 428/428
(100 %)
1 diff
(99.8 %id)
DA144607 amygdala .c 21 to 517 2 to 498   capped   497/497
(100 %)
0 diff
(100 %id)
DA203689 brain .c 21 to 602 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA374349 thalamus .c 21 to 580 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
CV025831 mixed .c 21 to 596 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DB108360 thymus .c 21 to 578 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DB127427 thymus .c 21 to 536 2 to 517   capped   516/516
(100 %)
0 diff
(100 %id)
DB260705 uterus .c 21 to 611 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA379084 thalamus .c 22 to 527 2 to 507   capped   506/506
(100 %)
0 diff
(100 %id)
BI823222 pooled brain, lung, testis .c 22 to 828 1 to 801       801/804
(99 %)
21 diff
(97.4 %id)
TI_57201467   .c 22 to 828 64 to 864       801/867
(92 %)
24 diff
(97.3 %id)
CB124437 Liver .c 22 to 290 1 to 269       269/269
(100 %)
4 diff
(98.6 %id)
CN428439 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 23 to 584 9 to 570       562/570
(98 %)
6 diff
(99.0 %id)
BM554560 amelanotic melanoma, cell line, skin .c 23 to 980 17 to 980       964/1073
(89 %)
17 diff
(98.5 %id)
CF132471 Chondrosarcoma Lung Metastasis cell lines, lung .c 23 to 628 1 to 606       606/606
(100 %)
0 diff
(100 %id)
CR990268 T-Lymphocytes .c 23 to 774 1 to 752       752/752
(100 %)
0 diff
(100 %id)
TI_1948080580   .c 23 to 650 132 to 762   fully sequenced,   631/762
(82 %)
10 diff
(98.7 %id)
TI_159676733   .c 23 to 858 51 to 880       830/1023
(81 %)
23 diff
(97.8 %id)
BI912216 leukocyte .c 24 to 650 12 to 635       627/672
(93 %)
30 diff
(95.6 %id)
TI_57236225   .c 24 to 650 12 to 635       627/672
(93 %)
30 diff
(95.6 %id)
AL559391 T cells from T cell leukemia .c 25 to 838 1 to 814       814/814
(100 %)
2 diff
(99.8 %id)
BM009787 amelanotic melanoma, cell line, skin .c 25 to 540 1 to 515       515/516
(99 %)
8 diff
(98.5 %id)
TI_59384558   .c 26 to 540 59 to 572       514/515
(99 %)
8 diff
(98.5 %id)
BQ935553 large cell carcinoma, lung .c 27 to 882 1 to 865       865/964
(89 %)
23 diff
(97.7 %id)
CA495409   .c 28 to 904 1 to 877       877/877
(100 %)
9 diff
(99.0 %id)
BI906636 leukocyte .c 29 to 854 1 to 825       825/884
(93 %)
18 diff
(98.0 %id)
TI_57233072   .c 29 to 854 57 to 881       825/940
(87 %)
22 diff
(97.7 %id)
BI911826 leukocyte .c 31 to 895 13 to 876       862/877
(98 %)
23 diff
(97.4 %id)
TI_57233799   .c 31 to 895 13 to 876       862/877
(98 %)
23 diff
(97.4 %id)
CR592042 Neuroblastoma Cot 25-normalized .c 32 to 1517 1 to 1486       1486/1486
(100 %)
0 diff
(100 %id)
BX416651 neuroblastoma .c 32 to 969 1 to 937       937/937
(100 %)
3 diff
(99.7 %id)
BX376384 Neuroblastoma Cot 25-normalized .c 32 to 873 1 to 842   fully sequenced,   842/842
(100 %)
1 diff
(99.9 %id)
BX459212 placenta .c 32 to 982 1 to 950       950/1037
(91 %)
2 diff
(99.9 %id)
CB594626 Blood, promyelocytic leukemia .c 32 to 832 1 to 808       808/898
(89 %)
15 diff
(98.4 %id)
CB145053 Liver .c 32 to 486 1 to 455       455/455
(100 %)
3 diff
(99.4 %id)
BX955369   .c 33 to 318 1 to 286       286/286
(100 %)
5 diff
(98.3 %id)
BI197450 brain, neuroblastoma .c 34 to 888 1 to 846       846/914
(92 %)
56 diff
(93.9 %id)
CR619322 Neuroblastoma Cot 50-normalized .c 35 to 1539 1 to 1505       1505/1505
(100 %)
0 diff
(100 %id)
AL529755 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .c 35 to 791 1 to 755   fully sequenced,   755/755
(100 %)
1 diff
(99.9 %id)
CR984290 T-Lymphocytes .c 39 to 779 1 to 741       741/745
(99 %)
4 diff
(99.5 %id)
BI756081 brain .c 50 to 784 1 to 736       736/736
(100 %)
2 diff
(99.8 %id)
TI_57216369   .c 50 to 784 31 to 766       736/766
(96 %)
12 diff
(98.5 %id)
BP268752 thyroid .c 59 to 637 1 to 579       579/579
(100 %)
0 diff
(100 %id)
BP269180 thyroid .c 59 to 639 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
TI_154185934   .c 62 to 560 120 to 618       499/954
(52 %)
7 diff
(99.3 %id)
CX164676 human embryonic stem cells differentiated toan early endodermal cell type .c 90 to 874 1 to 785       785/785
(100 %)
0 diff
(100 %id)
TI_154186023   .c 109 to 1087 113 to 1075       963/994
(96 %)
32 diff
(96.8 %id)
NM_019109.4   .c 229 to 3911 250 to 3932 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 3932/3932
(100 %)
0 diff
(100 %id)
DA879477 Prostate .c 229 to 536 251 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA906273   .c 229 to 477 246 to 495   capped   494/495
(99 %)
8 diff
(98.4 %id)
DB058031 testis .c 229 to 515 250 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
TI_1948080581   .c 619 to 1414 924 to 123   fully sequenced,   802/924
(86 %)
9 diff
(99.1 %id)
TI_1948080240   .c 642 to 1414 892 to 120   fully sequenced,   773/892
(86 %)
7 diff
(99.3 %id)
TI_1948080754   .c 684 to 1414 859 to 125   fully sequenced,   735/859
(85 %)
7 diff
(99.2 %id)
TI_1948080411   .c 690 to 1414 851 to 128   fully sequenced,   724/851
(85 %)
1 diff
(99.9 %id)
BX394778 Neuroblastoma Cot 25-normalized .c 730 to 1518 808 to 13   fully sequenced,   796/808
(98 %)
14 diff
(98.3 %id)
AL529754 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .c 730 to 1539 810 to 1   fully sequenced,   810/810
(100 %)
25 diff
(97.0 %id)
BG775742 carcinoma, cell line, Prostate .c 737 to 1527 795 to 1   fully sequenced,   795/795
(100 %)
7 diff
(99.2 %id)
AA675922   .c 781 to 1574 798 to 4   fully sequenced,   795/798
(99 %)
6 diff
(99.3 %id)
R52790 whole brain .c 814 to 1253 1 to 444     Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 444/444
(100 %)
11 diff
(97.6 %id)
BX376383 Neuroblastoma Cot 25-normalized .c 843 to 1517 677 to 1   fully sequenced,   677/677
(100 %)
2 diff
(99.8 %id)
AL577963 placenta .c 980 to 1887 910 to 1       910/966
(94 %)
14 diff
(98.6 %id)
TI_227715658   .c 980 to 1926 1029 to 82   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 948/1032
(91 %)
13 diff
(98.8 %id)
W25302 senescent fibroblast .c 1006 to 1282 1 to 277       277/322
(86 %)
10 diff
(96.9 %id)
BX378874 Placenta Cot 25-normalized .c 1047 to 1890 840 to 1       840/840
(100 %)
8 diff
(99.1 %id)
BX434469 placenta .c 1095 to 1916 826 to 1       826/830
(99 %)
26 diff
(96.9 %id)
CD366777 Alveolar Macrophage, lung .c 1192 to 1926 755 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 737/737
(100 %)
1 diff
(99.9 %id)
TI_154057135   .c 1211 to 1926 809 to 94   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 716/993
(72 %)
5 diff
(99.5 %id)
CA418928 Chondrosarcoma Grade II, Left Pelvis .c 1211 to 1926 734 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 716/726
(98 %)
5 diff
(99.4 %id)
AW020287 cochlea, ear .c 1220 to 1605 1 to 392   fully sequenced, Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 392/392
(100 %)
8 diff
(98.0 %id)
BI496701 cochlea, ear .c 1220 to 1641 1 to 424   fully sequenced,   424/424
(100 %)
8 diff
(98.2 %id)
AL559390 T cells from T cell leukemia .c 1221 to 2088 863 to 1       863/863
(100 %)
12 diff
(98.7 %id)
BU682629 lung .c 1222 to 1920 717 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 699/699
(100 %)
1 diff
(99.9 %id)
BQ448211 Knee, Osteoarthritic Cartilage .c 1225 to 1926 718 to 17   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 702/702
(100 %)
2 diff
(99.8 %id)
BG751969 eye, normal pigmented retinal epithelium .c 1252 to 1977 1 to 729       729/729
(100 %)
9 diff
(98.8 %id)
BM690074 eye, Retina Foveal and Macular .c 1280 to 1697 1 to 417   fully sequenced, Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 417/417
(100 %)
3 diff
(99.3 %id)
BM663099 eye, RPE and Choroid .c 1323 to 1926 621 to 18   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 604/604
(100 %)
1 diff
(99.9 %id)
CA309834 Alveolar Macrophage, lung .c 1349 to 2066 732 to 15   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 718/718
(100 %)
1 diff
(99.9 %id)
BF339743 brain, glioblastoma with EGFR amplification .c 1351 to 1986 1 to 634       634/936
(67 %)
10 diff
(99.0 %id)
DB366067   .c 1353 to 1926 570 to 1       570/575
(99 %)
25 diff
(95.7 %id)
BU535260 mixed (pool of 40 RNAs) .c 1377 to 1924 1 to 548   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 548/548
(100 %)
3 diff
(99.5 %id)
BI088102 cervix .c 1382 to 1926 1 to 547   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 547/547
(100 %)
8 diff
(98.6 %id)
AL522334 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 1383 to 2073 710 to 18       693/801
(86 %)
0 diff
(100 %id)
BI764580 pooled colon, kidney, stomach .c 1401 to 2042 1 to 640       640/642
(99 %)
4 diff
(99.4 %id)
TI_57152686   .c 1401 to 2042 32 to 671       640/673
(95 %)
4 diff
(99.5 %id)
DB353834   .c 1406 to 1926 523 to 1       523/523
(100 %)
15 diff
(97.2 %id)
BQ002699 Chondrosarcoma, Left Pelvis .c 1408 to 2120 731 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 713/713
(100 %)
1 diff
(99.9 %id)
DB361001 mammary gland .c 1413 to 1926 505 to 1       505/535
(94 %)
18 diff
(96.7 %id)
DB361597 mammary gland .c 1419 to 1926 514 to 1       514/515
(99 %)
14 diff
(97.3 %id)
AW026514 brain, glioblastoma (pooled) .c 1441 to 1926 486 to 1       486/486
(100 %)
1 diff
(99.8 %id)
DB370049   .c 1449 to 1926 478 to 1       478/478
(100 %)
2 diff
(99.6 %id)
AA464368 ovarian tumor, ovary .c 1463 to 1973 1 to 510       510/510
(100 %)
4 diff
(99.3 %id)
BQ771533 Chondrosarcoma Grade II, Left Pelvis .c 1481 to 2102 642 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 624/624
(100 %)
3 diff
(99.6 %id)
AA632076 breast .c 1482 to 1919 438 to 1       438/443
(98 %)
1 diff
(99.8 %id)
AA464386 ovarian tumor, ovary .c 1485 to 1956 1 to 471       471/471
(100 %)
10 diff
(97.9 %id)
AI689262 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 1518 to 1921 404 to 1       404/404
(100 %)
1 diff
(99.8 %id)
N99927 senescent fibroblast .c 1536 to 1928 396 to 4       393/400
(98 %)
0 diff
(100 %id)
AW272715 colon, moderately-differentiated adenocarcinoma .c 1536 to 1926 408 to 18   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 391/391
(100 %)
4 diff
(99.0 %id)
AW264836 lung, two pooled squamous cell carcinomas .c 1543 to 1921 385 to 8       378/385
(98 %)
0 diff
(100 %id)
AA680361 liver and spleen .c 1545 to 1924 380 to 1       380/380
(100 %)
0 diff
(100 %id)
CA391104 eye, RPE/choroid .c 1549 to 2097 1 to 549       549/549
(100 %)
0 diff
(100 %id)
AI281824 colon, moderately-differentiated adenocarcinoma .c 1549 to 1926 391 to 14   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 378/378
(100 %)
1 diff
(99.8 %id)
DB361773 mammary gland .c 1550 to 2120 576 to 1       576/578
(99 %)
6 diff
(99.0 %id)
BU742277 eye, fetal eye .c 1568 to 2066 518 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 500/500
(100 %)
2 diff
(99.6 %id)
BI491350 cochlea, ear .c 1575 to 2139 581 to 18   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 564/564
(100 %)
1 diff
(99.9 %id)
BG114962 duodenal adenocarcinoma, cell line, small intestine .c 1587 to 2104 1 to 517   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 517/517
(100 %)
1 diff
(99.9 %id)
AA629813 lung, lung carcinoma .c 1609 to 1921 314 to 2       313/314
(99 %)
0 diff
(100 %id)
BI496700 cochlea, ear .c 1611 to 2112 502 to 1   fully sequenced,   502/502
(100 %)
3 diff
(99.5 %id)
AA594133 colon, colon tumor RER+ .c 1615 to 1921 307 to 1       307/307
(100 %)
1 diff
(99.7 %id)
BX089216 whole brain .c 1624 to 2124 515 to 15   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 501/501
(100 %)
0 diff
(100 %id)
BM689403.
matches multiple genes
eye, Retina Foveal and Macular .c 1626 to 1918 9 to 301     also hits gene LOC100132066 293/301
(97 %)
6 diff
(98.1 %id)
DB374313 placenta .c 1634 to 1924 293 to 3       291/293
(99 %)
0 diff
(100 %id)
DB363972   .c 1642 to 1920 275 to 1       275/275
(100 %)
9 diff
(96.8 %id)
AW269290 Kidney .c 1651 to 1926 277 to 1       277/277
(100 %)
4 diff
(98.6 %id)
BE041335 lymph node, lymphoma, follicular mixed small and largecell .c 1651 to 2067 422 to 4       419/422
(99 %)
0 diff
(100 %id)
AW474379 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 1657 to 2121 467 to 3       465/467
(99 %)
0 diff
(100 %id)
AI961941 adenocarcinoma, Pancreas .c 1665 to 1926 272 to 11   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 262/262
(100 %)
1 diff
(99.7 %id)
AW935332 denis_drash .c 1667 to 2014 1 to 348       348/349
(99 %)
3 diff
(99.2 %id)
BM661794 eye, Retina Foveal and Macular .c 1667 to 2120 472 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 454/454
(100 %)
1 diff
(99.8 %id)
AW612947 colon, moderately-differentiated adenocarcinoma .c 1673 to 2139 467 to 1       467/467
(100 %)
1 diff
(99.8 %id)
AA700910 liver and spleen .c 1676 to 2104 446 to 18   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 429/429
(100 %)
0 diff
(100 %id)
AA464702 ovarian tumor, ovary .c 1704 to 2120 417 to 1       417/417
(100 %)
1 diff
(99.8 %id)
BQ008364 Chondrosarcoma, Left Pelvis .c 1724 to 2120 416 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 398/398
(100 %)
1 diff
(99.8 %id)
AI273221 adenocarcinoma, colon .c 1732 to 2104 373 to 1       373/373
(100 %)
0 diff
(100 %id)
AI269409 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1742 to 2072 337 to 7       331/337
(98 %)
0 diff
(100 %id)
BE746553 adenocarcinoma cell line, ovary .c 1749 to 2119 1 to 366       366/366
(100 %)
6 diff
(98.4 %id)
R52791 whole brain .c 1764 to 2126 376 to 13   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 364/366
(99 %)
3 diff
(99.2 %id)
AI247775 liver and spleen .c 1796 to 2141 347 to 2       346/347
(99 %)
0 diff
(100 %id)
AW191640 Pancreas, pancreatic islets .c 1859 to 2237 15 to 398   tiling clone,   384/531
(72 %)
6 diff
(98.9 %id)
AA380399   .c 1875 to 2091 1 to 217       217/217
(100 %)
0 diff
(100 %id)
BF809427 colon_ins .c 1883 to 2218 1 to 336   tiling clone,   336/336
(100 %)
2 diff
(99.5 %id)
CR624559 Neuroblastoma Cot 50-normalized .d 1 to 1554 1 to 1554 exact tiling clone,   1554/1554
(100 %)
0 diff
(100 %id)
BX333796 Neuroblastoma Cot 50-normalized .d 1 to 893 1 to 896   fully sequenced,   894/894
(100 %)
5 diff
(99.5 %id)
BX351236 Neuroblastoma Cot 50-normalized .d 863 to 1553 696 to 3   fully sequenced,   694/696
(99 %)
2 diff
(99.8 %id)
CD629692   .d 1065 to 1591 22 to 548       527/548
(96 %)
13 diff
(97.7 %id)
CD629693   .d 1065 to 1336 272 to 1       272/294
(92 %)
4 diff
(98.7 %id)
CD366162 Alveolar Macrophage, lung .d 1065 to 1555 511 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 493/496
(99 %)
7 diff
(98.6 %id)
TI_149293496   .d 1072 to 1899 900 to 78   tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 823/976
(84 %)
12 diff
(98.8 %id)
BC031873 testis .e 1 to 2671 1 to 2671 D318E tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 2671/2671
(100 %)
5 diff
(99.9 %id)
EL595098 epidermis, skin .e 1084 to 1668 627 to 44     Submitted on the opposite strand 584/646
(90 %)
7 diff
(99.0 %id)
BM794638 stomach .e 1089 to 1629 1 to 540       540/540
(100 %)
3 diff
(99.5 %id)
DA022672   .e 1121 to 1678 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
BM856363 stomach .e 1144 to 1573 1 to 430       430/430
(100 %)
0 diff
(100 %id)
DA876135 Prostate .e 1149 to 1707 2 to 560   capped   559/560
(99 %)
2 diff
(99.7 %id)
BP256242 Kidney .e 1150 to 1702 1 to 553       553/553
(100 %)
7 diff
(98.8 %id)
BM725132 eye, fetal eye .e 1157 to 1802 1 to 646       646/646
(100 %)
0 diff
(100 %id)
BM728596 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 1161 to 1834 32 to 701       670/703
(95 %)
14 diff
(98.1 %id)
BM852978 Ascites, stomach .e 1201 to 1843 1 to 643   tiling clone,   643/643
(100 %)
0 diff
(100 %id)
BE892770 melanotic melanoma, skin .e 1235 to 1988 1 to 750       750/932
(80 %)
15 diff
(98.4 %id)
BI195478 brain, neuroblastoma .e 1242 to 2102 1 to 866       867/871
(99 %)
26 diff
(97.1 %id)
BE789156 large cell carcinoma, lung .e 1281 to 1940 1 to 661       661/721
(91 %)
8 diff
(98.9 %id)
EL595122 epidermis, skin .e 1303 to 1668 410 to 44     Submitted on the opposite strand 367/410
(89 %)
2 diff
(99.6 %id)
EL595127 epidermis, skin .e 1313 to 1668 402 to 44     Submitted on the opposite strand 359/402
(89 %)
5 diff
(98.8 %id)
BQ723102 sympathetic trunk .e 1329 to 2119 1 to 796       796/944
(84 %)
14 diff
(98.6 %id)
AA083625   .e 1355 to 1729 1 to 376       376/378
(99 %)
4 diff
(99.0 %id)
BQ549103 insulinoma, Pancreas .e 1355 to 1759 1 to 405   fully sequenced,   405/405
(100 %)
5 diff
(98.8 %id)
BI838304 pooled pancreas and spleen .e 1397 to 2196 1 to 818       818/818
(100 %)
24 diff
(97.1 %id)
TI_57162943   .e 1397 to 2196 39 to 856       818/856
(95 %)
29 diff
(96.7 %id)
BP253755 Kidney .e 1429 to 2010 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BX370817   .e 1447 to 2332 1 to 882       882/884
(99 %)
12 diff
(98.7 %id)
DN831716 pooled .e 1578 to 1954 402 to 25     Submitted on the opposite strand 379/402
(94 %)
2 diff
(99.6 %id)
TI_813709175   .e 1589 to 2111 1 to 523       523/527
(99 %)
24 diff
(95.5 %id)
DN831714 pooled .e 1623 to 1939 317 to 1     Submitted on the opposite strand 317/317
(100 %)
3 diff
(99.1 %id)
TI_57146666   .e 1628 to 2326 48 to 746       695/748
(92 %)
10 diff
(98.7 %id)
DN831717 pooled .e 1630 to 2097 1 to 469       469/469
(100 %)
11 diff
(97.7 %id)
CA453988   .e 1635 to 2485 1 to 875       875/891
(98 %)
25 diff
(97.2 %id)
CB241985 Human Lung Epithelial cells, lung .e 1655 to 2324 688 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 670/670
(100 %)
1 diff
(99.9 %id)
CA455103   .e 1658 to 2510 1 to 860       860/880
(97 %)
8 diff
(99.1 %id)
DN831715 pooled .e 1669 to 2091 8 to 431       424/431
(98 %)
9 diff
(98.0 %id)
CF131794 Chondrosarcoma Lung Metastasis cell lines, lung .e 1680 to 2448 1 to 769       769/769
(100 %)
5 diff
(99.4 %id)
TI_159677953   .e 1680 to 2667 46 to 1025       980/1048
(93 %)
35 diff
(96.7 %id)
BQ549588 insulinoma, Pancreas .e 1698 to 2316 619 to 1   fully sequenced,   619/619
(100 %)
1 diff
(99.9 %id)
AW968234   .e 1710 to 2416 1 to 708       708/708
(100 %)
10 diff
(98.6 %id)
AW968236   .e 1710 to 2305 1 to 597       597/597
(100 %)
11 diff
(98.2 %id)
AA256650 germinal center B cell .e 1710 to 2176 1 to 466       466/466
(100 %)
5 diff
(99.0 %id)
CN428441 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 1718 to 2478 1 to 763   tiling clone,   763/774
(98 %)
5 diff
(99.4 %id)
BP385022 pancreatic islet .e 1729 to 2326 1 to 598     Submitted on the opposite strand 598/599
(99 %)
3 diff
(99.5 %id)
AI538989 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .e 1729 to 2324 638 to 42   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 597/598
(99 %)
18 diff
(97.0 %id)
AW302197 Kidney .e 1792 to 2145 354 to 1       354/355
(99 %)
6 diff
(98.4 %id)
DR007934 pooled .e 1796 to 1945 150 to 1     Submitted on the opposite strand 150/150
(100 %)
4 diff
(97.4 %id)
CK003466 brain/CNS, Human Brain - Cerebellar Cortex .e 1801 to 2422 1 to 616       616/648
(95 %)
19 diff
(97.1 %id)
BM823016 stomach .e 1824 to 2300 1 to 478       478/478
(100 %)
3 diff
(99.4 %id)
AI094322 heart .e 1848 to 2323 485 to 11   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 475/475
(100 %)
21 diff
(95.6 %id)
BF912784 uterus_tumor .e 1856 to 2255 400 to 1     Submitted on the opposite strand 400/400
(100 %)
12 diff
(97.0 %id)
AI935462 Kidney .e 1884 to 2317 447 to 12   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 436/436
(100 %)
3 diff
(99.4 %id)
AI075918   .e 1885 to 2323 455 to 17   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 439/439
(100 %)
1 diff
(99.8 %id)
BE048443 Kidney .e 1895 to 2317 423 to 1       423/423
(100 %)
1 diff
(99.8 %id)
CF780575 Pooled Chondrosarcoma Tumor cells .e 1902 to 2410 9 to 518       510/1302
(39 %)
12 diff
(99.1 %id)
AI802901 pooled .e 1905 to 2647 753 to 11   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 743/743
(100 %)
11 diff
(98.6 %id)
BF914185 uterus_tumor .e 1908 to 2255 343 to 1     Submitted on the opposite strand 343/344
(99 %)
7 diff
(98.0 %id)
BG983453 colon_normal .e 1911 to 2363 534 to 76       459/553
(83 %)
6 diff
(99.0 %id)
CB158360 Liver .e 1920 to 2447 1 to 528       528/528
(100 %)
0 diff
(100 %id)
AW022729 cochlea, ear .e 1967 to 2409 1 to 446       446/446
(100 %)
7 diff
(98.5 %id)
AW022859 cochlea, ear .e 1967 to 2411 1 to 447       447/447
(100 %)
6 diff
(98.7 %id)
AI421046 Prostate .e 1981 to 2324 368 to 25   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 344/344
(100 %)
6 diff
(98.3 %id)
BF438369 Prostate .e 2030 to 2324 306 to 12   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 295/295
(100 %)
0 diff
(100 %id)
AW022849 cochlea, ear .e 2083 to 2408 1 to 328       328/328
(100 %)
1 diff
(99.7 %id)
AI889514 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 2121 to 2667 567 to 20   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 548/548
(100 %)
17 diff
(96.9 %id)
BE905535 epithelioid carcinoma, Pancreas .e 2152 to 2324 1 to 173   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 173/173
(100 %)
1 diff
(99.5 %id)
AI816825 2 pooled tumors (clear cell type), Kidney .e 2220 to 2324 127 to 23   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 105/108
(97 %)
3 diff
(97.3 %id)
AI889524 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 2220 to 2667 467 to 20   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 448/448
(100 %)
12 diff
(97.4 %id)
AA081418   .e 2238 to 2667 432 to 1       432/432
(100 %)
9 diff
(98.0 %id)
AI432014 adenocarcinoma, Pancreas .e 2648 to 2867 238 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 220/220
(100 %)
1 diff
(99.6 %id)
DA920694 small intestine .e 2650 to 3219 2 to 571   tiling clone, capped   570/570
(100 %)
1 diff
(99.9 %id)
BG335282 choriocarcinoma, placenta .e 2926 to 3542 1 to 617       617/637
(96 %)
8 diff
(98.8 %id)
BE734235 choriocarcinoma, placenta .e 2947 to 3599 1 to 654   tiling clone,   654/944
(69 %)
20 diff
(97.9 %id)
DB551902 hippocampus .e 3152 to 3615 1 to 464   tiling clone, Submitted on the opposite strand 464/464
(100 %)
6 diff
(98.8 %id)
FE192640   .e 3961 to 4431 117 to 587   tiling clone,   471/587
(80 %)
6 diff
(99.0 %id)
AI095642 uterus .e 4205 to 4658 453 to 1       453/453
(100 %)
7 diff
(98.5 %id)
AI089393 uterus .e 4210 to 4658 448 to 1       448/448
(100 %)
8 diff
(98.3 %id)
AA810665 germinal center B cell .e 4211 to 4658 462 to 15   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 448/448
(100 %)
3 diff
(99.4 %id)
BM851996 stomach .e 4225 to 4656 1 to 432       432/432
(100 %)
3 diff
(99.4 %id)
BM789800 Ascites, stomach .e 4244 to 4821 578 to 1   tiling clone, Submitted on the opposite strand 578/578
(100 %)
1 diff
(99.9 %id)
AW976919   .e 4247 to 4657 411 to 1     Submitted on the opposite strand 411/488
(84 %)
2 diff
(99.6 %id)
AI339625 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 4258 to 4653 406 to 11   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 396/396
(100 %)
5 diff
(98.8 %id)
AW243119 Kidney .e 4307 to 4656 349 to 1       349/352
(99 %)
3 diff
(99.2 %id)
T49495 placenta .e 4363 to 4447 94 to 12       83/96
(86 %)
0 diff
(100 %id)
AA761461 germinal center B cell .e 4393 to 4658 280 to 15   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 266/266
(100 %)
7 diff
(97.4 %id)
AI686212 Prostate .e 4473 to 4658 186 to 1       186/186
(100 %)
1 diff
(99.5 %id)
DA157345 amygdala .f 1 to 484 9 to 495   tiling clone, capped   494/494
(100 %)
3 diff
(99.4 %id)
AK311475 brain .f 1 to 1687 7 to 1698 L118P F316S Q334L tiling clone,   1698/1698
(100 %)
10 diff
(99.5 %id)
DA801389 brain .f 1 to 537 7 to 548   capped   547/547
(100 %)
6 diff
(99.0 %id)
TI_154045240   .f 1140 to 1881 825 to 86   tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 740/978
(75 %)
12 diff
(98.8 %id)
CA412074 Chondrosarcoma Grade II, Left Pelvis .f 1226 to 1881 676 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 658/658
(100 %)
1 diff
(99.9 %id)
DA058329 cerebellum .g 1 to 488 2 to 494   tiling clone, capped   493/493
(100 %)
6 diff
(98.8 %id)
AK298144   .g 419 to 1837 1 to 1421 exact tiling clone,   1421/1421
(100 %)
2 diff
(99.9 %id)
DA603039   .g 420 to 988 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA370174 thalamus .h 1 to 547 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA424376   .h 1 to 405 2 to 406   tiling clone, capped   405/405
(100 %)
1 diff
(99.8 %id)
DT220878 brain .h 1 to 746 1 to 746       746/747
(99 %)
4 diff
(99.5 %id)
BI464631 testis .h 1 to 708 1 to 712       714/717
(99 %)
25 diff
(96.6 %id)
CN428437 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .h 4 to 672 1 to 669       669/669
(100 %)
0 diff
(100 %id)
TI_57233136   .h 8 to 746 29 to 774       746/792
(94 %)
16 diff
(98.0 %id)
BI768927 pooled lung and spleen .h 11 to 746 1 to 744       742/744
(99 %)
20 diff
(97.4 %id)
BM808702 brain, hippocampus .h 11 to 728 9 to 729       721/1089
(66 %)
9 diff
(99.2 %id)
BU186622 epithelioid carcinoma, Pancreas .h 11 to 746 1 to 737       737/893
(82 %)
3 diff
(99.7 %id)
TI_57181745   .h 11 to 746 33 to 776       742/776
(95 %)
26 diff
(96.7 %id)
CN428440 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .h 13 to 639 1 to 627       627/627
(100 %)
1 diff
(99.9 %id)
BI906694 leukocyte .h 14 to 746 1 to 740       740/758
(97 %)
11 diff
(98.6 %id)
CD557474 testis .h 16 to 747 1 to 740       740/913
(81 %)
31 diff
(96.7 %id)
BI091303 cervix .h 26 to 94 1 to 69       69/69
(100 %)
0 diff
(100 %id)
AL537127 brain, fetal brain .h 40 to 917 1 to 878   tiling clone,   878/878
(100 %)
1 diff
(99.9 %id)
BF346180 anaplastic oligodendroglioma with 1p/19qloss, brain .h 40 to 94 1 to 55       55/55
(100 %)
1 diff
(98.2 %id)
BI758912 pooled colon, kidney, stomach .h 50 to 396 1 to 351       348/1086
(32 %)
9 diff
(99.2 %id)
BP281673 bone marrow .h 53 to 634 1 to 582       582/583
(99 %)
1 diff
(99.9 %id)
DA219570 brain .h 58 to 630 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
BG746408 adenocarcinoma cell line, colon .h 74 to 938 1 to 871       871/876
(99 %)
17 diff
(98.1 %id)
BM750855 Ascites, stomach .h 162 to 480 1 to 319       319/319
(100 %)
1 diff
(99.7 %id)
BI761190 pooled colon, kidney, stomach .h 866 to 1569 1 to 704   tiling clone,   704/706
(99 %)
7 diff
(99.1 %id)
CR746489 pooled colon, kidney, stomach .h 867 to 1386 1 to 520       520/520
(100 %)
4 diff
(99.3 %id)
AL566668 brain, fetal brain .h 1144 to 2046 903 to 1   tiling clone,   836/903
(92 %)
11 diff
(98.8 %id)
DA730505   .i 1 to 741 2 to 742   tiling clone, capped   741/747
(99 %)
6 diff
(99.2 %id)
BG115842 duodenal adenocarcinoma, cell line, small intestine .i 648 to 1308 1 to 665   tiling clone,   665/1104
(60 %)
34 diff
(97.0 %id)
DB496162.
matches multiple genes
hypothalamus .j 1 to 473 1 to 473   tiling clone, also hits gene maduby 473/473
(100 %)
7 diff
(98.6 %id)
DB567182.
matches multiple genes
hypothalamus .j 606 to 901 449 to 157   tiling clone, also hits gene maduby 293/451
(64 %)
48 diff
(89.4 %id)
BX364049   .k 1 to 974 5 to 972   tiling clone,   972/972
(100 %)
9 diff
(99.1 %id)
BX364048   .k 1547 to 2640 1094 to 1   tiling clone,   1094/1094
(100 %)
9 diff
(99.2 %id)
DA943859 Spleen .l 1 to 574 9 to 583 V38G V39G L40A D42R V43R ... tiling clone, capped   582/582
(100 %)
1 diff
(99.9 %id)
DA374744 thalamus .l 15 to 568 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
DA088394 cerebellum .m 1 to 575 2 to 576 R57W tiling clone, capped   575/575
(100 %)
1 diff
(99.9 %id)
AA421113   .n 1 to 429 1 to 428   tiling clone,   428/428
(100 %)
3 diff
(99.3 %id)
AA417376   .n 668 to 1071 407 to 4   tiling clone,   404/407
(99 %)
0 diff
(100 %id)
AK055222   .o 1 to 2264 2 to 2265 exact tiling clone, available from FLJ,   2265/2265
(100 %)
3 diff
(99.9 %id)
DA472546   .o 1 to 545 2 to 546 exact capped   545/545
(100 %)
0 diff
(100 %id)
BG717024 testis .o 253 to 1045 1 to 792   available from MGC,   792/792
(100 %)
9 diff
(98.9 %id)
DA414191 thalamus .o 254 to 819 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA869536 Prostate .o 254 to 794 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA103580 cerebellum .o 259 to 807 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BE735169 choriocarcinoma, placenta .o 270 to 1127 2 to 848       847/930
(91 %)
40 diff
(95.7 %id)
BQ688867 ductal carcinoma, cell line, Pancreas .o 278 to 1236 1 to 961       961/961
(100 %)
15 diff
(98.5 %id)
BQ688685 ductal carcinoma, cell line, Pancreas .o 278 to 1170 1 to 900       900/930
(96 %)
24 diff
(97.5 %id)
DB314795   .o 1728 to 2264 537 to 1       537/537
(100 %)
3 diff
(99.5 %id)
DA339292 hippocampus .p 1 to 561 9 to 570 S7V L8V A9G M10H H11A ... tiling clone, capped   569/569
(100 %)
2 diff
(99.7 %id)
AL711875 human skeletal muscle .q 1 to 522 1 to 522 W52R tiling clone,   522/522
(100 %)
3 diff
(99.5 %id)
BF950678 nervous_normal .r-u 1 to 208 12 to 217 L8* tiling clone,   206/227
(90 %)
10 diff
(95.6 %id)
BX402055   Gene SEC14L5andALG1, variant not shown         This clone was ignored    
BX479933   Gene SEC14L5andALG1, variant not shown         Submitted on the opposite strand    
N93194 parathyroid gland, parathyroid tumor Gene SEC14L5andALG1, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
W38780 parathyroid gland, parathyroid tumor Gene SEC14L5andALG1, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
AA651954 germinal center B cell Gene SEC14L5andALG1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BF343346 brain, glioblastoma with EGFR amplification Gene SEC14L5andALG1, variant not shown         Suspected internal deletion, this clone was ignored    
BG424655 Kidney, renal cell adenocarcinoma Gene SEC14L5andALG1, variant not shown         Suspected internal deletion, this clone was ignored    
BU145679 melanotic melanoma, cell line, skin Gene SEC14L5andALG1, variant not shown         Suspected internal deletion, this clone was ignored    
BQ684289 melanotic melanoma, cell line, skin Gene SEC14L5andALG1, variant not shown         Suspected internal deletion, this clone was ignored    
DB364231   Gene SEC14L5andALG1, variant not shown         Suspected internal deletion, this clone was ignored    
DA732653   Gene SEC14L5andALG1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB077897 testis Gene SEC14L5andALG1, variant not shown       capped This clone was ignored    
DB340664 testis Gene SEC14L5andALG1, variant not shown         This clone was ignored    
TI_159722154   Gene SEC14L5andALG1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BP369182 testis Gene SEC14L5andALG1, variant not shown         This clone was ignored    
CB853059 Human Lung Epithelial cells, lung Gene SEC14L5andALG1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC