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Gene ALAS1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
503 representative clones for gene ALAS1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK300993 small intestine .a 1 to 2372 1 to 2372 D297G tiling clone,   2372/2372
(100 %)
2 diff
(100.0 %id)
DC355293   .a 1 to 452 1 to 452       452/452
(100 %)
0 diff
(100 %id)
DC388742 small intestine .a 1 to 508 1 to 510       510/510
(100 %)
2 diff
(99.7 %id)
DC329104 corpus callosum .a 3 to 554 1 to 552       552/552
(100 %)
0 diff
(100 %id)
BU195729 eye, retinoblastoma .a 8 to 877 12 to 891       880/891
(98 %)
23 diff
(97.5 %id)
TI_57199165   .a 46 to 830 40 to 823       784/826
(94 %)
8 diff
(99.1 %id)
TI_154135791   .a 1990 to 2656 759 to 94   tiling clone, AAA   666/673
(98 %)
18 diff
(97.4 %id)
DA067996 cerebellum .b -8 to 560 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA299229 hippocampus .b -8 to 547 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA710129   .b -8 to 530 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA753558   .b -8 to 553 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BE299159 muscle, rhabdomyosarcoma .b 1 to 570 8 to 596       596/596
(100 %)
26 diff
(95.7 %id)
NM_000688.4   .b 1 to 2404 4 to 2407 exact RefSeq,   2407/2407
(100 %)
0 diff
(100 %id)
DA345082 substantia nigra .b 1 to 557 4 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DA250529 caudate nucleus .b 1 to 565 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA482849   .b 1 to 591 2 to 592   tiling clone, capped   591/591
(100 %)
0 diff
(100 %id)
DA513209 brain .b 1 to 560 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA528566 brain .b 1 to 600 2 to 601   capped   600/600
(100 %)
1 diff
(99.9 %id)
DA530215 brain .b 1 to 508 2 to 509   capped   508/508
(100 %)
1 diff
(99.9 %id)
DA162409 amygdala .b 3 to 558 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA206585 brain .b 3 to 562 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA221420 brain .b 3 to 568 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA444783 tongue, tumor tissue .b 3 to 573 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA483646 brain .b 3 to 459 2 to 458   capped   457/457
(100 %)
0 diff
(100 %id)
DA745768   .b 3 to 569 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA821809 pericardium .b 3 to 458 2 to 458   capped   457/457
(100 %)
1 diff
(99.8 %id)
BM561578 duodenal adenocarcinoma, cell line, small intestine .b 4 to 975 1 to 972       972/1016
(95 %)
15 diff
(98.6 %id)
TI_57162958   .b 13 to 885 57 to 928       872/928
(93 %)
19 diff
(98.0 %id)
AY260745   .b 14 to 2365 1 to 2352 exact tiling clone, AAA   2352/2352
(100 %)
3 diff
(99.9 %id)
CD689723 normal nasopharynx .b 29 to 621 20 to 613       594/613
(96 %)
10 diff
(98.4 %id)
BP196284 adrenal gland .b 30 to 614 1 to 582       585/582
(100 %)
12 diff
(98.0 %id)
DA012633 adrenal gland .b 31 to 595 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA135030 alzheimer cortex .b 31 to 592 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA277207 corpus callosum .b 31 to 599 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA346441 substantia nigra .b 31 to 578 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA645529   .b 31 to 623 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA712796   .b 31 to 549 2 to 521   capped   520/520
(100 %)
1 diff
(99.9 %id)
DA820114   .b 31 to 588 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BP331582 rectum .b 31 to 613 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DB184432 liver, tumor tissue .b 31 to 595 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
BP197770 adrenal gland .b 32 to 613 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA381672 thalamus .b 32 to 587 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA812607 ovary, tumor tissue .b 32 to 684 2 to 654   capped   653/661
(98 %)
1 diff
(99.9 %id)
DA013796 adrenal gland .b 33 to 618 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA015484 adrenal gland .b 33 to 599 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA268394 caudate nucleus .b 33 to 549 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
DB188338 liver, tumor tissue .b 33 to 604 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA481801   .b 35 to 611 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA634710 Kidney .b 36 to 603 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
AL528930 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 37 to 859 1 to 824       824/824
(100 %)
9 diff
(99.0 %id)
AL551847 placenta, Placenta Cot 25-normalized .b 37 to 1135 1 to 1095   tiling clone,   1095/1142
(95 %)
18 diff
(98.5 %id)
BF347786 anaplastic oligodendroglioma with 1p/19qloss, brain .b 47 to 739 1 to 690       690/867
(79 %)
11 diff
(98.8 %id)
BG826691 muscle, rhabdomyosarcoma .b 47 to 761 1 to 715       715/721
(99 %)
1 diff
(99.9 %id)
BG386168 adenocarcinoma cell line, colon .b 52 to 560 1 to 509       509/509
(100 %)
1 diff
(99.9 %id)
H92815 pineal gland .b 54 to 439 1 to 389       389/389
(100 %)
5 diff
(98.8 %id)
BF205017 muscle, rhabdomyosarcoma .b 54 to 755 1 to 698       698/951
(73 %)
12 diff
(98.8 %id)
BF305760 muscle, rhabdomyosarcoma .b 54 to 746 1 to 691       691/885
(78 %)
14 diff
(98.5 %id)
BF309801 muscle, rhabdomyosarcoma .b 54 to 698 1 to 645       645/645
(100 %)
0 diff
(100 %id)
BG825308 muscle, rhabdomyosarcoma .b 54 to 912 1 to 853       855/881
(97 %)
25 diff
(97.2 %id)
BG825556 muscle, rhabdomyosarcoma .b 54 to 839 1 to 793       791/793
(99 %)
17 diff
(97.9 %id)
BC011798 Muscle, rhabdomyosarcoma .b 55 to 2380 1 to 2326 exact tiling clone, available from MGC, AAA   2326/2326
(100 %)
1 diff
(100.0 %id)
BM459347 lymph, lymphoma, cell line .b 57 to 911 1 to 853       853/1077
(79 %)
22 diff
(98.0 %id)
BE742945 adenocarcinoma cell line, ovary .b 65 to 761 1 to 695       695/975
(71 %)
34 diff
(96.6 %id)
BE297090 muscle, rhabdomyosarcoma .b 73 to 763 1 to 697       697/790
(88 %)
24 diff
(97.0 %id)
BE297344 muscle, rhabdomyosarcoma .b 74 to 723 1 to 659       659/659
(100 %)
26 diff
(96.1 %id)
DA059904 cerebellum .b 126 to 544 149 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA122470 cerebellum .b 126 to 530 151 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA159432 amygdala .b 126 to 529 163 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA254290 caudate nucleus .b 126 to 544 163 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA508252 brain .b 126 to 520 156 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA528177 brain .b 126 to 590 151 to 615   capped   614/614
(100 %)
0 diff
(100 %id)
DA567765   .b 126 to 526 153 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB177354 kidney, tumor tissue .b 126 to 529 151 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BE019499 muscle, rhabdomyosarcoma .b 143 to 618 1 to 477       477/495
(96 %)
14 diff
(97.2 %id)
AL575316 placenta, Placenta Cot 25-normalized .b 1247 to 2351 1093 to 1       1093/1101
(99 %)
18 diff
(98.4 %id)
AL528929 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 1472 to 2333 863 to 1       863/863
(100 %)
17 diff
(98.1 %id)
AU155380 ovary, tumor tissue .b 1818 to 2364 545 to 1       545/561
(97 %)
16 diff
(97.2 %id)
BE208042 muscle, rhabdomyosarcoma .b 1907 to 2384 497 to 20   AAA   478/478
(100 %)
1 diff
(99.8 %id)
DC316072 amygdala .c -9 to 516 1 to 526       526/526
(100 %)
0 diff
(100 %id)
DC349623 brain .c 1 to 496 2 to 497       497/497
(100 %)
0 diff
(100 %id)
DC355382   .c 1 to 565 10 to 574       566/566
(100 %)
0 diff
(100 %id)
DC379038 pericardium .c 1 to 573 2 to 574   tiling clone,   574/574
(100 %)
0 diff
(100 %id)
BP236198 coronary artery .c 2 to 583 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC424046 whole embryo, mainly head .c 2 to 730 1 to 727       727/857
(84 %)
8 diff
(99.1 %id)
DC379464 pericardium .c 2 to 570 1 to 571       571/571
(100 %)
2 diff
(99.7 %id)
DC384360   .c 2 to 562 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DA427977 colon .c 3 to 475 2 to 474   capped   473/473
(100 %)
0 diff
(100 %id)
BP233871 coronary artery .c 4 to 600 1 to 598       598/598
(100 %)
7 diff
(98.9 %id)
F06671 brain, total brain .c 9 to 339 1 to 331       331/331
(100 %)
0 diff
(100 %id)
BU158282 eye, retinoblastoma .c 21 to 879 12 to 879       868/880
(98 %)
16 diff
(98.2 %id)
DC304769 cerebellum .c 30 to 594 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC316806 amygdala .c 30 to 595 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC357506   .c 30 to 609 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
BP343664 stomach mucosa .c 30 to 613 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
DC413145 liver, tumor tissue .c 30 to 617 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DC337654 substantia nigra .c 31 to 590 1 to 561       561/561
(100 %)
2 diff
(99.7 %id)
AL531651 brain, fetal liver, Liver, neuroblastoma cells .c 41 to 943 1 to 902   tiling clone,   902/993
(90 %)
1 diff
(99.9 %id)
BG391900 embryonal carcinoma, cell line, testis .c 55 to 765 1 to 711       711/871
(81 %)
10 diff
(98.9 %id)
AA314936 colon .c 60 to 514 1 to 458       458/459
(99 %)
4 diff
(99.2 %id)
Y00451 Liver .c 64 to 2216 1 to 2154 E2D R6G P43Q A44P P45S ...     2154/2156
(99 %)
58 diff
(97.4 %id)
BQ439004 melanotic melanoma, skin .c 74 to 937 1 to 877   tiling clone,   877/939
(93 %)
23 diff
(97.6 %id)
DA152426 amygdala .c 124 to 697 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DC313187 amygdala .c 126 to 549 149 to 572       572/572
(100 %)
2 diff
(99.7 %id)
AL564127 brain, fetal liver, Liver, neuroblastoma cells .c 1154 to 2127 1014 to 35   tiling clone,   961/1020
(94 %)
52 diff
(95.0 %id)
AA702707 liver and spleen .c 1473 to 2192 719 to 1       719/731
(98 %)
15 diff
(98.0 %id)
CA309589 Alveolar Macrophage, lung .c 1476 to 2176 715 to 19   tiling clone, AAA   697/706
(98 %)
6 diff
(99.2 %id)
AI627387 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 1479 to 2199 721 to 2       720/744
(96 %)
21 diff
(97.2 %id)
BU626771 Alveolar Macrophage, lung .c 1484 to 2196 727 to 15   tiling clone, AAA   713/713
(100 %)
2 diff
(99.8 %id)
AI376859   .c 1494 to 2199 704 to 4       701/704
(99 %)
9 diff
(98.8 %id)
BQ021481 lung, Metastatic Chondrosarcoma .c 1498 to 2196 713 to 15   tiling clone, AAA   699/699
(100 %)
0 diff
(100 %id)
CA417011 Chondrosarcoma Cell line .c 1498 to 2196 712 to 15   AAA   698/698
(100 %)
1 diff
(99.9 %id)
BU623798 cell lines, Enchondroma .c 1498 to 2176 697 to 19   AAA   679/679
(100 %)
0 diff
(100 %id)
CA308676 Alveolar Macrophage, lung .c 1498 to 2196 713 to 15   AAA   699/699
(100 %)
1 diff
(99.9 %id)
BQ007580 Chondrosarcoma, Left Pubic Bone .c 1499 to 2196 715 to 15   AAA   701/701
(100 %)
4 diff
(99.5 %id)
CN258741 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 1503 to 2087 1 to 585       585/586
(99 %)
1 diff
(99.9 %id)
BM993790 Bone, Subchondral Bone .c 1526 to 2196 689 to 19   AAA   671/671
(100 %)
0 diff
(100 %id)
AI633563 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1529 to 2178 648 to 1       648/648
(100 %)
10 diff
(98.5 %id)
TI_154020795   .c 1537 to 2196 755 to 96   AAA   660/660
(100 %)
2 diff
(99.7 %id)
AW003903 brain, glioblastoma (pooled) .c 1557 to 2196 678 to 37   AAA   642/642
(100 %)
66 diff
(89.8 %id)
TI_157595656   .c 1557 to 2217 773 to 117   AAA   657/660
(99 %)
23 diff
(96.6 %id)
AI830210 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 1571 to 2175 604 to 1       604/608
(99 %)
3 diff
(99.6 %id)
BQ001687 lung, Metastatic Chondrosarcoma .c 1571 to 2196 640 to 15   AAA   626/626
(100 %)
1 diff
(99.9 %id)
CN479671 Bone, Subchondral Bone .c 1572 to 2196 643 to 19   AAA   625/625
(100 %)
0 diff
(100 %id)
CA309062 Alveolar Macrophage, lung .c 1577 to 2176 614 to 16   AAA   599/599
(100 %)
2 diff
(99.7 %id)
CA308605 Alveolar Macrophage, lung .c 1578 to 2184 621 to 16   AAA   606/606
(100 %)
1 diff
(99.9 %id)
AA431231   .c 1582 to 1939 1 to 358   fully sequenced,   358/358
(100 %)
0 diff
(100 %id)
AV726347 hypothalamus .c 1591 to 2177 11 to 595       585/780
(75 %)
12 diff
(98.5 %id)
BU626833 Alveolar Macrophage, lung .c 1591 to 2176 604 to 19   AAA   586/586
(100 %)
0 diff
(100 %id)
BI438758 Pancreas, Purified pancreatic islet .c 1593 to 2181 591 to 3       589/591
(99 %)
0 diff
(100 %id)
AV725788 hypothalamus .c 1595 to 2157 1 to 556   AAA   556/571
(97 %)
20 diff
(96.5 %id)
AW182395 pooled .c 1605 to 2179 572 to 1       572/572
(100 %)
14 diff
(97.6 %id)
AA576579 breast, breast tumor .c 1615 to 2192 588 to 13   AAA   576/576
(100 %)
4 diff
(99.4 %id)
R97346 liver and spleen .c 1619 to 1942 1 to 333   fully sequenced,   333/333
(100 %)
4 diff
(98.8 %id)
CA438637 lung, Metastatic Chondrosarcoma .c 1624 to 2196 587 to 15   AAA   573/573
(100 %)
0 diff
(100 %id)
AI457748 pooled .c 1629 to 2180 548 to 1       548/548
(100 %)
16 diff
(97.1 %id)
AA593082 colon, colon tumor RER+ .c 1630 to 2196 590 to 25   AAA   567/566
(100 %)
31 diff
(94.6 %id)
BU941186 mixed (pool of 40 RNAs) .c 1634 to 2180 1 to 547       547/551
(99 %)
1 diff
(99.9 %id)
AU144251 whole embryo, mainly head .c 1635 to 2196 560 to 1       560/567
(98 %)
6 diff
(99.0 %id)
BG058802 blood, lymphocyte .c 1638 to 2183 551 to 6       546/551
(99 %)
1 diff
(99.9 %id)
AA605295 adrenal adenoma, adrenal gland .c 1661 to 2059 400 to 1       400/400
(100 %)
2 diff
(99.5 %id)
AA648352 germinal center B cell .c 1668 to 2190 522 to 1       522/522
(100 %)
12 diff
(97.8 %id)
AA505771 breast .c 1672 to 2176 500 to 1       501/508
(98 %)
19 diff
(96.3 %id)
AI418570 pooled .c 1678 to 2181 505 to 2       504/505
(99 %)
17 diff
(96.7 %id)
BM770447 stomach .c 1678 to 2176 1 to 499   AAA   499/499
(100 %)
5 diff
(99.0 %id)
BP384709 pancreatic islet .c 1685 to 2181 1 to 497     Submitted on the opposite strand 497/498
(99 %)
1 diff
(99.8 %id)
AI803110 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1686 to 2192 507 to 1       507/507
(100 %)
0 diff
(100 %id)
AA894414 carcinoid, lung .c 1689 to 2175 488 to 1       488/594
(82 %)
14 diff
(97.7 %id)
AI289802 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 1692 to 2197 506 to 1       506/506
(100 %)
6 diff
(98.9 %id)
AI003337 schizophrenic brain S-11 frontal lobe .c 1696 to 2196 523 to 22   AAA   502/502
(100 %)
10 diff
(98.1 %id)
AA708917 uterus .c 1700 to 2196 509 to 13   AAA   497/497
(100 %)
3 diff
(99.4 %id)
AI189178 uterus .c 1704 to 2191 486 to 1       486/486
(100 %)
15 diff
(97.0 %id)
AI376033   .c 1709 to 2181 473 to 1       473/473
(100 %)
2 diff
(99.6 %id)
AA766185 germinal center B cell .c 1715 to 2190 477 to 1       477/477
(100 %)
22 diff
(95.4 %id)
AA470668 colon .c 1716 to 2193 480 to 1       480/480
(100 %)
2 diff
(99.6 %id)
AI148780 placenta .c 1725 to 2196 492 to 21   AAA   472/472
(100 %)
0 diff
(100 %id)
BX118463 whole brain .c 1729 to 2176 463 to 15   AAA   449/449
(100 %)
1 diff
(99.8 %id)
BM999135 lung, Lung Focal Fibrosis .c 1738 to 2196 473 to 15   AAA   459/463
(99 %)
9 diff
(98.1 %id)
BP390042 pancreatic islet .c 1744 to 2178 1 to 436     Submitted on the opposite strand 436/436
(100 %)
3 diff
(99.4 %id)
DB511901 testis .c 1745 to 2175 10 to 441     Submitted on the opposite strand 432/441
(97 %)
7 diff
(98.5 %id)
AA995992 carcinoid, lung .c 1745 to 2199 454 to 1       454/497
(91 %)
16 diff
(96.8 %id)
AI305178 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1745 to 2192 448 to 1       448/457
(98 %)
3 diff
(99.4 %id)
AW130979 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 1745 to 2176 431 to 1       431/475
(90 %)
6 diff
(98.8 %id)
AW419277 endometrioid ovarian metastasis, ovary .c 1745 to 2176 471 to 40   AAA   432/490
(88 %)
19 diff
(96.2 %id)
TI_157595752   .c 1745 to 2217 582 to 110   tiling clone, AAA   473/477
(99 %)
10 diff
(98.0 %id)
AA565923 adrenal adenoma, adrenal gland .c 1746 to 2177 435 to 1       435/435
(100 %)
1 diff
(99.8 %id)
AA723720 pooled .c 1747 to 2196 468 to 11   AAA   458/462
(99 %)
17 diff
(96.4 %id)
AA434197 ovarian tumor, ovary .c 1749 to 2193 1 to 445   fully sequenced,   445/445
(100 %)
0 diff
(100 %id)
BM785272 myeloma .c 1824 to 2176 1 to 353   AAA   353/353
(100 %)
1 diff
(99.8 %id)
AA834367 adenocarcinoma, colon .c 1834 to 2196 363 to 1       363/363
(100 %)
0 diff
(100 %id)
BM795202 stomach .c 1852 to 2196 1 to 344   AAA   344/344
(100 %)
1 diff
(99.8 %id)
AA928154 pooled .c 1867 to 2198 332 to 1       332/332
(100 %)
1 diff
(99.7 %id)
AA432252   .c 1878 to 2199 323 to 2   fully sequenced,   322/323
(99 %)
0 diff
(100 %id)
AI092380 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1878 to 2179 302 to 1       302/302
(100 %)
0 diff
(100 %id)
CA306408 Alveolar Macrophage, lung .c 1882 to 2176 313 to 19   AAA   295/295
(100 %)
0 diff
(100 %id)
CB529491 Aveolar Macrophage, lung .c 1882 to 2196 329 to 15   AAA   315/315
(100 %)
1 diff
(99.7 %id)
CA429618 Cell Line, Chondrosarcoma .c 1884 to 2196 327 to 15   AAA   313/313
(100 %)
2 diff
(99.4 %id)
BG741064 skin .c 1888 to 2196 1 to 309   AAA   309/309
(100 %)
1 diff
(99.7 %id)
AI868691 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1891 to 2216 331 to 7       325/331
(98 %)
2 diff
(99.4 %id)
BF477751 Prostate .c 1898 to 2199 304 to 3       302/304
(99 %)
0 diff
(100 %id)
F02941 brain, total brain .c 1912 to 2176 265 to 1       265/265
(100 %)
0 diff
(100 %id)
R97311 liver and spleen .c 1917 to 2175 260 to 1   fully sequenced,   260/260
(100 %)
1 diff
(99.7 %id)
AA434424 ovarian tumor, ovary .c 2036 to 2196 161 to 1   fully sequenced,   161/161
(100 %)
0 diff
(100 %id)
DA168101 amygdala .d -10 to 550 20 to 580   capped   561/561
(100 %)
1 diff
(99.9 %id)
AU279391   .d -9 to 538 1 to 548       548/548
(100 %)
2 diff
(99.7 %id)
DA022024   .d -9 to 557 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA031646   .d -8 to 545 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA147940 amygdala .d -8 to 562 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA282670 corpus callosum .d -8 to 544 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA517107 brain .d -8 to 507 2 to 517   capped   516/516
(100 %)
0 diff
(100 %id)
DA645258   .d -8 to 584 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA656678   .d -8 to 561 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA690493   .d -8 to 541 2 to 558   capped   557/557
(100 %)
4 diff
(99.3 %id)
DA980594 synovial membrane tissue from rheumatioidarthritis .d -8 to 569 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB122894 thymus .d -8 to 559 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
CD050022 embryonic stem cells, WA01, passage 38 .d 1 to 818 28 to 849       830/907
(91 %)
21 diff
(97.7 %id)
BX427355 fetal liver, Liver .d 1 to 844 9 to 850       850/850
(100 %)
9 diff
(99.0 %id)
AL555603 placenta .d 1 to 1005 7 to 1012   tiling clone,   1012/1012
(100 %)
2 diff
(99.9 %id)
DA152274 amygdala .d 1 to 577 5 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
BP293831 lung .d 1 to 571 4 to 574       574/574
(100 %)
9 diff
(98.5 %id)
DA644443   .d 1 to 579 4 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
BP281062   .d 1 to 580 2 to 581       581/581
(100 %)
0 diff
(100 %id)
DA082441 cerebellum .d 1 to 573 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA133182 alzheimer cortex .d 1 to 535 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA154608 amygdala .d 1 to 574 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA197311 brain .d 1 to 744 2 to 746   capped   745/802
(92 %)
11 diff
(98.7 %id)
DA203061 brain .d 1 to 572 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA258519 caudate nucleus .d 1 to 569 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA426188 colon .d 1 to 561 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA487818 brain .d 1 to 547 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA507306 brain .d 1 to 567 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA543086   .d 1 to 304 2 to 305   capped   304/304
(100 %)
0 diff
(100 %id)
DA643777   .d 1 to 493 2 to 494   capped   493/493
(100 %)
0 diff
(100 %id)
DA706455   .d 1 to 569 2 to 569   capped   568/568
(100 %)
6 diff
(99.0 %id)
DA774715 brain .d 1 to 541 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA787034 brain .d 1 to 581 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA869013 Prostate .d 1 to 547 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA940722 Spleen .d 1 to 604 2 to 605   capped   604/604
(100 %)
0 diff
(100 %id)
DA976134 synovial membrane tissue from rheumatioidarthritis .d 1 to 552 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA996344   .d 1 to 533 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DB016277 esophageal, tumor tissue .d 1 to 567 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB150043 thymus .d 1 to 517 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
DB169066 kidney, tumor tissue .d 1 to 570 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB187317 liver, tumor tissue .d 1 to 556 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB240732 trachea .d 1 to 595 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA354847 substantia nigra .d 2 to 575 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
CD684155 normal nasopharynx .d 2 to 561 41 to 600       560/600
(93 %)
7 diff
(98.9 %id)
BP258169 heart .d 2 to 584 1 to 580       583/582
(100 %)
3 diff
(99.5 %id)
BP282314 bone marrow .d 2 to 584 1 to 583       583/588
(99 %)
2 diff
(99.7 %id)
BM785562 stomach .d 2 to 526 1 to 525       525/525
(100 %)
0 diff
(100 %id)
BP364914 lung .d 2 to 610 1 to 609       609/609
(100 %)
0 diff
(100 %id)
DA002978   .d 3 to 574 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA138469 alzheimer cortex .d 3 to 568 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA141814 alzheimer cortex .d 3 to 538 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DA170393 amygdala .d 3 to 525 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DA172887 amygdala .d 3 to 558 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA181362 amygdala .d 3 to 559 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA207199 brain .d 3 to 562 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA230702 brain .d 3 to 567 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA263306 caudate nucleus .d 3 to 566 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA294642 hippocampus .d 3 to 555 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA483229 brain .d 3 to 552 2 to 551   capped   550/550
(100 %)
4 diff
(99.3 %id)
DA548368   .d 3 to 507 2 to 506   capped   505/505
(100 %)
1 diff
(99.9 %id)
DA552771   .d 3 to 552 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
BP235727 coronary artery .d 3 to 584 1 to 583       583/588
(99 %)
16 diff
(97.3 %id)
DA578451   .d 3 to 548 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA579495   .d 3 to 547 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA598988   .d 3 to 547 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DA611240   .d 3 to 475 2 to 476   capped   475/475
(100 %)
2 diff
(99.6 %id)
DA672637   .d 3 to 594 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA674677   .d 3 to 454 2 to 454   capped   453/453
(100 %)
1 diff
(99.8 %id)
DA765363 tongue .d 3 to 572 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB004107 breast, tumor tissue .d 3 to 538 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DB006105 breast, tumor tissue .d 3 to 539 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DB115328 thymus .d 3 to 430 2 to 429   capped   428/428
(100 %)
0 diff
(100 %id)
DB169350 kidney, tumor tissue .d 3 to 578 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB174001 kidney, tumor tissue .d 3 to 563 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB209233 trachea .d 3 to 507 2 to 506   capped   505/505
(100 %)
1 diff
(99.9 %id)
DB211859 trachea .d 3 to 543 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB258648 uterus .d 3 to 551 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DB264533 uterus .d 3 to 584 2 to 583   capped   582/590
(98 %)
0 diff
(100 %id)
BF795766 lymph, lymphoma, cell line .d 4 to 734 1 to 727       727/1100
(66 %)
27 diff
(97.6 %id)
DA707376   .d 4 to 572 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
DA169804 amygdala .d 5 to 575 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
DA170617 amygdala .d 5 to 579 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA347506 substantia nigra .d 5 to 580 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
CN258746 embryonic stem cells, DMSO-treated H9 cellline .d 5 to 781 1 to 777       777/777
(100 %)
3 diff
(99.7 %id)
DA466075   .d 5 to 581 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA473042   .d 5 to 561 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA574544   .d 5 to 584 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA620563   .d 5 to 584 2 to 581   capped   580/581
(99 %)
1 diff
(99.9 %id)
DA629135 Kidney .d 5 to 582 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA662202   .d 5 to 557 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA818055   .d 5 to 567 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA897804 skeletal muscle .d 5 to 572 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB012034 esophageal, tumor tissue .d 5 to 568 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BG177527 lymph, lymphoma, cell line .d 7 to 732 1 to 730       730/1137
(64 %)
8 diff
(99.3 %id)
BQ055873 lymph, lymphoma, cell line .d 8 to 584 1 to 582       582/1035
(56 %)
29 diff
(97.2 %id)
DA668574 esophagus .d 8 to 575 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
BU146444 dorsal root ganglia .d 9 to 789 26 to 811       786/896
(87 %)
10 diff
(98.9 %id)
BX444311 adult brain, brain .d 10 to 961 1 to 946       946/997
(94 %)
13 diff
(98.7 %id)
AL553505 placenta, Placenta Cot 25-normalized .d 11 to 1043 1 to 1023       1023/1040
(98 %)
13 diff
(98.8 %id)
BX426336 B cells (Ramos cell line) .d 13 to 942 1 to 930       930/930
(100 %)
7 diff
(99.3 %id)
DN992816 brain, whole brain .d 13 to 351 1 to 342       342/342
(100 %)
11 diff
(96.8 %id)
AB063322   .d 14 to 2227 13 to 2226 exact tiling clone, AAA   2214/2226
(99 %)
7 diff
(99.7 %id)
CD697778 normal nasopharynx .d 14 to 641 21 to 649       629/649
(96 %)
6 diff
(99.1 %id)
AL532694 adult brain, brain .d 15 to 1020 1 to 995       995/998
(99 %)
17 diff
(98.3 %id)
BX423854 adult brain, brain .d 15 to 1142 1 to 1115       1115/1115
(100 %)
18 diff
(98.4 %id)
BX420462 brain, fetal brain .d 17 to 851 1 to 836       836/836
(100 %)
9 diff
(99.0 %id)
BQ067338 pooled brain, lung, testis .d 18 to 777 27 to 793       767/1228
(62 %)
22 diff
(98.3 %id)
CD701174 normal nasopharynx .d 19 to 715 22 to 718       697/718
(97 %)
7 diff
(99.1 %id)
BQ216936 large cell carcinoma, lung .d 20 to 800 1 to 792       790/884
(89 %)
17 diff
(98.1 %id)
CN258751 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 21 to 558 9 to 546       538/546
(98 %)
0 diff
(100 %id)
BU507346 leiomyosarcoma, uterus .d 22 to 851 1 to 837       837/846
(98 %)
11 diff
(98.7 %id)
BP196611 adrenal gland .d 30 to 612 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
DA305209 hippocampus .d 30 to 598 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA369108 subthalamic nucleus .d 30 to 598 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
BP263647 small intestine .d 30 to 613 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BP276357 Kidney .d 30 to 610 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DB156676 thymus .d 30 to 603 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA031616   .d 31 to 618 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA205910 brain .d 31 to 603 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA301206 hippocampus .d 31 to 609 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA336173 hippocampus .d 31 to 602 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA468299   .d 31 to 597 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA547922   .d 31 to 486 2 to 457   capped   456/456
(100 %)
1 diff
(99.8 %id)
DA642455 Liver .d 31 to 552 2 to 524   capped   523/523
(100 %)
1 diff
(99.9 %id)
DA701258   .d 31 to 555 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DA712681   .d 31 to 588 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA849370 placenta .d 31 to 590 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BP196036 adrenal gland .d 32 to 611 1 to 581       579/581
(99 %)
2 diff
(99.7 %id)
BP197768 adrenal gland .d 32 to 614 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP198562 adrenal gland .d 32 to 613 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA148138 amygdala .d 32 to 549 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA300611 hippocampus .d 32 to 604 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BP306450   .d 32 to 614 1 to 583       583/583
(100 %)
10 diff
(98.3 %id)
BP350014 brain .d 32 to 613 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
DA012413 adrenal gland .d 33 to 584 2 to 553   capped   552/560
(98 %)
0 diff
(100 %id)
BI964082 Islets of Langerhans, Pancreas .d 34 to 604 1 to 571       571/571
(100 %)
3 diff
(99.5 %id)
BU662552 blood .d 36 to 659 1 to 624       624/624
(100 %)
0 diff
(100 %id)
AV710280 adrenal cortico adenoma for Cushing'ssyndrome .d 36 to 680 1 to 647       647/647
(100 %)
11 diff
(98.3 %id)
AL545461 placenta, Placenta Cot 25-normalized .d 37 to 864 1 to 827       827/827
(100 %)
4 diff
(99.6 %id)
AL548076 placenta, Placenta Cot 25-normalized .d 37 to 1067 1 to 1019   fully sequenced,   1019/1019
(100 %)
16 diff
(98.5 %id)
TI_57149936   .d 39 to 936 22 to 921       900/921
(97 %)
27 diff
(97.1 %id)
CN258743 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 40 to 766 31 to 757       727/762
(95 %)
7 diff
(99.1 %id)
DR004056 Liver .d 40 to 822 1 to 783       783/783
(100 %)
6 diff
(99.3 %id)
BG830836 epithelioid carcinoma cell line, Pancreas .d 41 to 734 1 to 698       698/760
(91 %)
17 diff
(97.8 %id)
BQ924491 large cell carcinoma, lung .d 41 to 890 11 to 860       850/861
(98 %)
19 diff
(97.8 %id)
BX337970 Placenta Cot 25-normalized .d 42 to 486 1 to 471       471/471
(100 %)
24 diff
(95.0 %id)
BM906826 ovary (pool of 3) .d 45 to 584 66 to 608       543/1451
(37 %)
36 diff
(97.6 %id)
CA942996 Pancreas, Purified pancreatic islet .d 45 to 628 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BI763425 pooled colon, kidney, stomach .d 46 to 936 1 to 893       893/893
(100 %)
24 diff
(97.4 %id)
BI094061 cervix .d 47 to 882 1 to 831       831/832
(99 %)
28 diff
(96.7 %id)
BI822333 pooled brain, lung, testis .d 47 to 97 1 to 51       51/51
(100 %)
0 diff
(100 %id)
TI_57201432   .d 48 to 772 32 to 756       725/761
(95 %)
14 diff
(98.2 %id)
CR737533 liver and spleen .d 50 to 776 1 to 727   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 727/735
(98 %)
3 diff
(99.6 %id)
BQ641463 eye, normal pigmented retinal epithelium .d 50 to 901 1 to 858       858/889
(96 %)
15 diff
(98.4 %id)
TI_57174397   .d 50 to 740 33 to 724       692/853
(81 %)
16 diff
(98.2 %id)
AA355258   .d 51 to 355 1 to 307       307/319
(96 %)
10 diff
(96.9 %id)
BP423424 small intestine .d 51 to 549 1 to 499     Submitted on the opposite strand 499/499
(100 %)
0 diff
(100 %id)
BF305807 muscle, rhabdomyosarcoma .d 53 to 837 1 to 773       773/946
(81 %)
35 diff
(96.4 %id)
DR158763 human embryonic stem cells differentiated toan early endodermal cell type .d 53 to 876 1 to 824       824/824
(100 %)
1 diff
(99.9 %id)
BG025464 lymph, lymphoma, cell line .d 54 to 732 1 to 681       681/786
(86 %)
16 diff
(98.0 %id)
BG818938 anaplastic oligodendroglioma with 1p/19qloss, brain .d 54 to 575 38 to 576       539/627
(85 %)
37 diff
(94.1 %id)
T89844 liver and spleen .d 58 to 206 1 to 149       149/154
(96 %)
1 diff
(99.4 %id)
BQ229205 embryonal carcinoma, cell line, testis .d 58 to 495 1 to 444       444/922
(48 %)
9 diff
(99.1 %id)
CA392829 eye, RPE/choroid .d 59 to 612 1 to 554       554/554
(100 %)
0 diff
(100 %id)
BQ421331 epithelioid carcinoma, Pancreas .d 59 to 932 1 to 877       877/879
(99 %)
9 diff
(99.0 %id)
CN258750 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 61 to 641 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BU850296 ovary, teratocarcinoma, cell line .d 64 to 957 1 to 904       904/937
(96 %)
35 diff
(96.3 %id)
BU931795 ovary, teratocarcinoma, cell line .d 64 to 895 1 to 842       842/904
(93 %)
11 diff
(98.8 %id)
BE622451 melanotic melanoma, skin .d 68 to 741 1 to 669       669/958
(69 %)
13 diff
(98.7 %id)
BE882555 leiomyosarcoma, uterus .d 73 to 734 1 to 670       670/794
(84 %)
19 diff
(97.7 %id)
BE613962 leiomyosarcoma, uterus .d 74 to 788 1 to 709       709/788
(89 %)
12 diff
(98.5 %id)
AA707391 liver and spleen .d 82 to 772 689 to 1       689/689
(100 %)
7 diff
(99.0 %id)
X56351 Liver .d 82 to 2227 1 to 2146 exact     2146/2146
(100 %)
1 diff
(100.0 %id)
BJ994017 hepatoblastoma .d 89 to 688 1 to 600       600/600
(100 %)
1 diff
(99.9 %id)
CF272420 Brain glioblastoma .d 122 to 955 1 to 841       841/864
(97 %)
9 diff
(99.0 %id)
AK312566 brain .d 126 to 2080 152 to 2106 exact     2106/2106
(100 %)
2 diff
(100.0 %id)
BG899257 cartilage .d 126 to 496 225 to 595       515/522
(98 %)
9 diff
(98.3 %id)
DA089940 cerebellum .d 126 to 550 151 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA150798 amygdala .d 126 to 527 151 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DC314120 amygdala .d 126 to 518 163 to 557       557/557
(100 %)
4 diff
(99.3 %id)
DA156174 amygdala .d 126 to 537 151 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DC314542 amygdala .d 126 to 509 163 to 548       548/550
(99 %)
3 diff
(99.5 %id)
DA162011 amygdala .d 126 to 549 143 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA244823 brain .d 126 to 331 151 to 356   capped   355/355
(100 %)
0 diff
(100 %id)
DA258517 caudate nucleus .d 126 to 475 149 to 498   capped   497/497
(100 %)
0 diff
(100 %id)
DC329297 corpus callosum .d 126 to 516 168 to 558       558/558
(100 %)
0 diff
(100 %id)
DA290863 hippocampus .d 126 to 507 151 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA298567 hippocampus .d 126 to 543 151 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA301541 hippocampus .d 126 to 531 149 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA311070 hippocampus .d 126 to 535 151 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA341464 substantia nigra .d 126 to 540 151 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA372900 thalamus .d 126 to 495 163 to 532   capped   531/531
(100 %)
1 diff
(99.9 %id)
DC340101 thalamus .d 126 to 528 169 to 571       571/571
(100 %)
0 diff
(100 %id)
DA490277 brain .d 126 to 539 152 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA533195 brain .d 126 to 378 169 to 421   capped   420/420
(100 %)
2 diff
(99.6 %id)
DB447390 testis .d 126 to 402 160 to 435       435/435
(100 %)
4 diff
(99.1 %id)
DA544215   .d 126 to 536 151 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA563457 heart .d 126 to 516 143 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
BP872439 embryonal kidney .d 126 to 557 149 to 581       581/583
(99 %)
23 diff
(96.1 %id)
BM546974 ovary (pool of 3) .d 126 to 948 199 to 1028       1003/1064
(94 %)
19 diff
(98.3 %id)
BU173391 leiomyosarcoma, uterus .d 126 to 871 152 to 899       899/899
(100 %)
11 diff
(98.8 %id)
NM_199166.1   .d 126 to 2227 157 to 2258 exact RefSeq,   2258/2258
(100 %)
0 diff
(100 %id)
DA691060   .d 126 to 355 171 to 400   capped   399/399
(100 %)
0 diff
(100 %id)
DA751588   .d 126 to 530 151 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DC373890 tongue .d 126 to 558 164 to 596       596/596
(100 %)
1 diff
(99.9 %id)
DA817777   .d 126 to 538 149 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA819667   .d 126 to 515 153 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DC384342   .d 126 to 510 163 to 547       547/547
(100 %)
0 diff
(100 %id)
BP357550 mammary gland .d 126 to 556 151 to 581       581/581
(100 %)
2 diff
(99.7 %id)
DB194869 trachea .d 126 to 478 163 to 515   capped   514/514
(100 %)
0 diff
(100 %id)
DB202623 trachea .d 126 to 563 151 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
AU310126 neuroblastoma .d 128 to 710 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
TI_1948095436   .d 152 to 1031 126 to 1012       883/1291
(68 %)
25 diff
(98.1 %id)
TI_1948095736   .d 152 to 1127 131 to 1106       976/1250
(78 %)
32 diff
(97.5 %id)
TI_1948095583   .d 157 to 1126 130 to 1113   AAA   982/1264
(77 %)
43 diff
(96.6 %id)
TI_1948095891   .d 157 to 1031 132 to 1013       882/1306
(67 %)
28 diff
(97.9 %id)
BE542683 cervix .d 170 to 775 1 to 605       605/772
(78 %)
15 diff
(98.1 %id)
CN258747 embryonic stem cells, DMSO-treated H9 cellline .d 173 to 629 1 to 457       457/457
(100 %)
0 diff
(100 %id)
BI439077 Pancreas, Purified pancreatic islet .d 218 to 815 1 to 598       598/598
(100 %)
1 diff
(99.9 %id)
BM762703 lymph node, stomach .d 240 to 882 1 to 643       643/643
(100 %)
1 diff
(99.9 %id)
BM762621 lymph node, stomach .d 240 to 918 1 to 679       679/679
(100 %)
1 diff
(99.9 %id)
BF969214 adrenal cortex carcinoma, cell line, adrenal gland .d 268 to 794 1 to 527       527/527
(100 %)
1 diff
(99.9 %id)
AA037574 uterus .d 279 to 615 1 to 346   fully sequenced,   346/346
(100 %)
7 diff
(98.0 %id)
BE548815 cervical carcinoma cell line, cervix .d 284 to 1104 1 to 823       823/843
(97 %)
24 diff
(97.2 %id)
BF027321 melanotic melanoma, skin .d 287 to 950 1 to 670       670/956
(70 %)
7 diff
(99.3 %id)
BG106221 lymph, lymphoma, cell line .d 287 to 1102 1 to 819       819/1147
(71 %)
29 diff
(97.5 %id)
BP197957 adrenal gland .d 291 to 872 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BE297589 muscle, rhabdomyosarcoma .d 297 to 910 1 to 617       617/617
(100 %)
6 diff
(99.1 %id)
BE408615 choriocarcinoma, placenta .d 300 to 916 1 to 617       617/621
(99 %)
5 diff
(99.2 %id)
AI167217 pooled .d 327 to 773 447 to 1       447/447
(100 %)
4 diff
(99.2 %id)
DA042561 bladder .d 329 to 892 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
W92592 heart .d 332 to 769 1 to 446   fully sequenced,   446/446
(100 %)
11 diff
(97.6 %id)
CR606089 T cells (Jurkat cell line) Cot10-normalized .d 334 to 2198 1 to 1865   tiling clone,   1865/1865
(100 %)
0 diff
(100 %id)
AL557909 T cells from T cell leukemia .d 334 to 1234 1 to 886   fully sequenced,   886/886
(100 %)
8 diff
(99.1 %id)
BX376907 Neuroblastoma Cot 50-normalized .d 358 to 1139 356 to 1128       773/1131
(68 %)
29 diff
(97.5 %id)
CD014147   .d 364 to 2129 1783 to 18       1766/1791
(98 %)
14 diff
(99.3 %id)
DA464207   .d 409 to 955 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
BI223798 cervical carcinoma cell line, cervix .d 433 to 1284 1 to 850       850/850
(100 %)
10 diff
(98.9 %id)
BQ363221 stomach .d 450 to 1064 3 to 615       613/615
(99 %)
7 diff
(98.9 %id)
CD609378   .d 457 to 1262 20 to 828       809/855
(94 %)
17 diff
(98.1 %id)
CD609379   .d 490 to 1268 784 to 5       780/784
(99 %)
2 diff
(99.8 %id)
BP198011 adrenal gland .d 504 to 1086 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
T89574 liver and spleen .d 526 to 731 206 to 1       206/206
(100 %)
1 diff
(99.6 %id)
CX873768 embryonic stem .d 581 to 1336 1 to 756       756/756
(100 %)
0 diff
(100 %id)
AA037368 uterus .d 583 to 767 185 to 1   fully sequenced,   185/185
(100 %)
0 diff
(100 %id)
BP235131 coronary artery .d 621 to 1215 1 to 593       593/593
(100 %)
4 diff
(99.4 %id)
BX346061   .d 638 to 1488 1 to 848       848/848
(100 %)
8 diff
(99.1 %id)
BX423789 fetal liver, Liver .d 638 to 1532 1 to 897       897/897
(100 %)
8 diff
(99.2 %id)
CR590706 fetal liver .d 639 to 2178 1 to 1540       1540/1540
(100 %)
0 diff
(100 %id)
BU941098 mixed (pool of 40 RNAs) .d 656 to 1458 1 to 818       818/820
(99 %)
21 diff
(97.5 %id)
W94537 heart .d 704 to 769 67 to 1   fully sequenced,   67/67
(100 %)
0 diff
(100 %id)
BG163714 hypernephroma, cell line, Kidney .d 735 to 1427 14 to 697       684/949
(72 %)
24 diff
(97.5 %id)
DB136936 thymus .d 741 to 1292 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BG739866 skin .d 759 to 1402 1 to 650       650/891
(72 %)
17 diff
(98.1 %id)
BP346682 brain .d 789 to 1368 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
F11257 brain, total brain .d 801 to 1102 1 to 302       302/302
(100 %)
0 diff
(100 %id)
F11258 brain, total brain .d 801 to 1100 1 to 300       300/300
(100 %)
0 diff
(100 %id)
AL036097 brain .d 801 to 1228 1 to 428       428/428
(100 %)
2 diff
(99.6 %id)
H11678 whole brain .d 802 to 1330 1 to 541       541/545
(99 %)
25 diff
(95.5 %id)
BP299301   .d 809 to 1368 1 to 560       560/560
(100 %)
4 diff
(99.3 %id)
BG036565 adenocarcinoma, cell line, Prostate .d 815 to 1570 1 to 751       751/968
(77 %)
17 diff
(98.3 %id)
BQ066991 brain .d 819 to 1758 11 to 959       949/1066
(89 %)
47 diff
(95.6 %id)
BP303778   .d 825 to 1406 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
AA323489 brain, cerebellum .d 834 to 1041 1 to 208       208/208
(100 %)
1 diff
(99.6 %id)
CA388886 eye, RPE/choroid .d 834 to 1242 1 to 409       409/409
(100 %)
0 diff
(100 %id)
DR761897 embryonic stem .d 872 to 1608 1 to 737       737/737
(100 %)
0 diff
(100 %id)
BQ883683 eye, normal pigmented retinal epithelium .d 900 to 1488 1 to 590       590/941
(62 %)
7 diff
(99.3 %id)
AA098907 uterus .d 906 to 1377 1 to 474       474/474
(100 %)
6 diff
(98.8 %id)
CN258745 embryonic stem cells, DMSO-treated H9 cellline .d 908 to 1450 1 to 543       543/543
(100 %)
0 diff
(100 %id)
AV719828.
matches multiple genes
corresponding non cancerous liver tissue .d 920 to 1379 460 to 1     Submitted on the opposite strand, also hits gene SARDH 460/460
(100 %)
0 diff
(100 %id)
CD246063 White Matter .d 957 to 1704 20 to 773       754/812
(92 %)
19 diff
(97.7 %id)
CN258748 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 958 to 1615 16 to 673       658/673
(97 %)
10 diff
(98.6 %id)
CD516694 White Matter .d 999 to 1850 36 to 899       864/900
(96 %)
23 diff
(97.5 %id)
BP329712 rectum .d 999 to 1580 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
AA336705 endometrium .d 1008 to 1260 1 to 254       254/254
(100 %)
1 diff
(99.7 %id)
BM760773 lymph node, stomach .d 1008 to 1242 1 to 233       233/233
(100 %)
2 diff
(99.2 %id)
BM761665 lymph node, stomach .d 1008 to 1510 1 to 503       503/503
(100 %)
0 diff
(100 %id)
BM842759 lymph node, stomach .d 1008 to 1634 1 to 626       626/626
(100 %)
1 diff
(99.9 %id)
AA070252   .d 1018 to 1464 1 to 448       448/452
(99 %)
17 diff
(96.3 %id)
AL572771 placenta, Placenta Cot 25-normalized .d 1037 to 2176 1132 to 1   fully sequenced,   1132/1132
(100 %)
28 diff
(97.6 %id)
BM821564 stomach .d 1054 to 1493 1 to 438       438/438
(100 %)
2 diff
(99.6 %id)
BP331549 rectum .d 1065 to 1648 1 to 584       584/584
(100 %)
0 diff
(100 %id)
AL576486 placenta, Placenta Cot 25-normalized .d 1079 to 2175 1095 to 1       1095/1149
(95 %)
10 diff
(99.2 %id)
AL578064 placenta .d 1141 to 2129 989 to 1       989/989
(100 %)
20 diff
(98.0 %id)
AL564840 adult brain, brain .d 1147 to 2174 1046 to 29       1018/1049
(97 %)
15 diff
(98.6 %id)
BX423852 adult brain, brain .d 1147 to 2207 1059 to 1       1059/1115
(94 %)
15 diff
(98.7 %id)
BM854186 stomach .d 1162 to 1371 1 to 210       210/210
(100 %)
1 diff
(99.6 %id)
BM740448 stomach .d 1172 to 1788 1 to 617       617/617
(100 %)
5 diff
(99.2 %id)
BQ685719 ductal carcinoma, cell line, Pancreas .d 1191 to 2067 1 to 880       880/884
(99 %)
15 diff
(98.4 %id)
AL579850 T cells from T cell leukemia .d 1204 to 2192 992 to 7   fully sequenced,   986/992
(99 %)
10 diff
(99.0 %id)
BG674334 skin .d 1205 to 2065 1 to 865       865/1059
(81 %)
23 diff
(97.9 %id)
BX426335 B cells (Ramos cell line) .d 1210 to 2190 982 to 1       982/982
(100 %)
9 diff
(99.1 %id)
BM797246 Ascites, stomach .d 1210 to 1641 1 to 432       432/432
(100 %)
1 diff
(99.8 %id)
CB115780 Liver .d 1214 to 1724 1 to 512       512/512
(100 %)
2 diff
(99.7 %id)
BP245770 Kidney .d 1232 to 1819 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
TI_1948095892   .d 1247 to 2083 949 to 99       851/1244
(68 %)
50 diff
(96.0 %id)
BX427354 fetal liver, Liver .d 1256 to 2183 927 to 1       927/927
(100 %)
4 diff
(99.6 %id)
BQ420625 large cell carcinoma, lung .d 1260 to 2132 1 to 876       876/1078
(81 %)
47 diff
(95.7 %id)
BX423788 fetal liver, Liver .d 1274 to 2178 903 to 1       903/903
(100 %)
5 diff
(99.5 %id)
BX346060   .d 1298 to 2176 877 to 1       877/877
(100 %)
12 diff
(98.7 %id)
BG768228 melanotic melanoma, high MDR (cell line), skin .d 1302 to 1418 1 to 117       117/117
(100 %)
0 diff
(100 %id)
TI_1948095437   .d 1321 to 2083 871 to 108       764/1236
(61 %)
13 diff
(99.0 %id)
BX356947 Placenta Cot 25-normalized .d 1322 to 2113 794 to 1       794/971
(81 %)
30 diff
(97.0 %id)
TI_1948095584   .d 1322 to 2083 884 to 120       765/1299
(58 %)
12 diff
(99.1 %id)
TI_1948095737   .d 1322 to 2083 883 to 118       766/1262
(60 %)
7 diff
(99.5 %id)
TI_149302233   .d 1324 to 2187 917 to 63   AAA   855/962
(88 %)
17 diff
(98.3 %id)
AL571173 placenta, Placenta Cot 25-normalized .d 1333 to 2196 862 to 1       862/862
(100 %)
2 diff
(99.8 %id)
AI832786 colon .d 1342 to 2203 860 to 1       860/860
(100 %)
23 diff
(97.4 %id)
BG289305 bladder, transitional cell papilloma, cell line .d 1343 to 2154 1 to 813       813/815
(99 %)
23 diff
(97.2 %id)
BX373213 Placenta Cot 25-normalized .d 1348 to 2178 838 to 5       834/868
(96 %)
21 diff
(97.6 %id)
TI_154127290   .d 1358 to 2207 927 to 90   AAA   838/974
(86 %)
22 diff
(97.8 %id)
BE545162 cervical carcinoma cell line, cervix .d 1389 to 2076 1 to 679       679/681
(99 %)
17 diff
(97.6 %id)
CR596499 Neuroblastoma Cot 25-normalized .d 1401 to 2183 1 to 783       783/783
(100 %)
0 diff
(100 %id)
BX329430 Neuroblastoma Cot 25-normalized .d 1414 to 2178 770 to 5       766/781
(98 %)
13 diff
(98.4 %id)
BI334617 cervical carcinoma cell line, cervix .d 1417 to 2073 1 to 657       657/657
(100 %)
0 diff
(100 %id)
BG685330 B-cells, primary B-cells from tonsils (cell line) .d 1427 to 2206 1 to 781       781/833
(93 %)
4 diff
(99.6 %id)
BQ929169 carcinoma, cell line, Prostate .d 1429 to 2021 1 to 592       592/888
(66 %)
9 diff
(99.0 %id)
CB160413 Liver .d 1430 to 1992 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
BM712574 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 1436 to 1853 1 to 418   fully sequenced,   418/418
(100 %)
0 diff
(100 %id)
CA308592 Alveolar Macrophage, lung .d 1446 to 2207 775 to 15   AAA   761/761
(100 %)
4 diff
(99.5 %id)
CD367952 Alveolar Macrophage, lung .d 1458 to 2207 764 to 15   AAA   750/750
(100 %)
0 diff
(100 %id)
AA453691 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1472 to 1880 1 to 407   fully sequenced,   407/407
(100 %)
6 diff
(98.6 %id)
CA748624 Alveolar Macrophage, lung .d 1472 to 2195 740 to 17   AAA   724/725
(99 %)
0 diff
(100 %id)
BM980466 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 1478 to 2187 728 to 19   AAA   710/710
(100 %)
1 diff
(99.9 %id)
BJ994018 hepatoblastoma .d 1521 to 2120 600 to 1       600/600
(100 %)
4 diff
(99.4 %id)
AU310127 neuroblastoma .d 1675 to 2225 553 to 3       551/553
(99 %)
0 diff
(100 %id)
DB303748 brain .d 1697 to 2207 516 to 1       516/519
(99 %)
15 diff
(97.2 %id)
AA070207   .d 1732 to 2187 456 to 1       456/456
(100 %)
3 diff
(99.4 %id)
CA942757 Pancreas, Purified pancreatic islet .d 1761 to 2210 451 to 1       451/451
(100 %)
1 diff
(99.8 %id)
BM676318 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 1823 to 2187 383 to 19   fully sequenced, AAA   365/365
(100 %)
1 diff
(99.8 %id)
AA447761 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1850 to 2207 366 to 1   fully sequenced,   366/366
(100 %)
7 diff
(98.1 %id)
AA099824 uterus .d 1899 to 2207 309 to 1       309/309
(100 %)
0 diff
(100 %id)
F08921 brain, total brain .d 1914 to 2187 274 to 1       274/274
(100 %)
0 diff
(100 %id)
BG189999   .d 1917 to 2203 1 to 288   AAA   288/288
(100 %)
2 diff
(99.4 %id)
BG213265   .d 1918 to 2227 1 to 309   AAA   309/309
(100 %)
2 diff
(99.4 %id)
CA309088 Alveolar Macrophage, lung .d 1919 to 2187 284 to 16   AAA   269/270
(99 %)
1 diff
(99.7 %id)
F08920 brain, total brain .d 1921 to 2187 267 to 1       267/267
(100 %)
0 diff
(100 %id)
CN258742 embryonic stem cells, DMSO-treated H9 cellline .d 1927 to 2203 1 to 277   AAA   277/277
(100 %)
0 diff
(100 %id)
AA897693 pooled .d 1996 to 2173 178 to 1       178/178
(100 %)
0 diff
(100 %id)
AA348927 adrenal gland .d 1999 to 2187 190 to 1       190/190
(100 %)
1 diff
(99.5 %id)
BF895333 marrow .d 2001 to 2163 1 to 163       163/163
(100 %)
0 diff
(100 %id)
BF923469 nervous_tumor .d 2001 to 2141 1 to 141       141/141
(100 %)
1 diff
(99.3 %id)
H11592 whole brain .d 2067 to 2190 124 to 1       124/124
(100 %)
0 diff
(100 %id)
BG682258 skin, squamous cell carcinoma .e 1 to 786 1 to 794   tiling clone,   794/1022
(77 %)
17 diff
(98.4 %id)
BE164089 head_neck .e 557 to 690 147 to 16   tiling clone, Submitted on the opposite strand 132/147
(89 %)
0 diff
(100 %id)
T16690   .e 791 to 1140 349 to 1   tiling clone,   349/352
(99 %)
3 diff
(99.2 %id)
DB222320 trachea .f-u 1 to 587 2 to 588 exact tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
BC063005 Blood, adult leukocytes .f-u 56 to 1664 1 to 1614   tiling clone, available from MGC, AAA   1614/1614
(100 %)
2 diff
(99.9 %id)
BI907342 leukocyte .f-u 56 to 811 1 to 758   available from MGC,   758/759
(99 %)
6 diff
(99.3 %id)
TI_57232520   .f-u 56 to 811 30 to 787       758/788
(96 %)
6 diff
(99.3 %id)
DA016851 adrenal gland .g 1 to 514 2 to 515 R7P tiling clone, capped   514/514
(100 %)
2 diff
(99.7 %id)
BI008358 kidney_tumor .h-u 1 to 510 24 to 533 H2D D4G E6R R7A E8G ... tiling clone,   510/536
(95 %)
18 diff
(96.7 %id)
BI008585 kidney_tumor .h-u 18 to 546 1 to 529   tiling clone,   529/532
(99 %)
17 diff
(96.9 %id)
DB299481 cerebellum Gene ALAS1, variant not shown         This clone was ignored    
DA105691 cerebellum Gene ALAS1, variant not shown       capped This clone was ignored    
AI283473 pooled Gene ALAS1, variant not shown         Suspected internal deletion, this clone was ignored    
163 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI