To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene AKR1D1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
51 supporting clones for gene AKR1D1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_005989.3   .a 1 to 2710 1 to 2710 exact RefSeq,   2710/2710
(100 %)
0 diff
(100 %id)
Z28339 Liver .a 19 to 2710 1 to 2694 exact tiling clone,   2694/2694
(100 %)
6 diff
(99.8 %id)
TI_1607544821   .a 43 to 1027 48 to 1030       983/1254
(78 %)
6 diff
(99.6 %id)
BC130625 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 46 to 2392 1 to 2347 exact tiling clone,   2347/2347
(100 %)
5 diff
(99.8 %id)
BC130627 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 46 to 2392 1 to 2347 exact     2347/2347
(100 %)
5 diff
(99.8 %id)
AK289425 breast .a 61 to 1542 1 to 1482 D14V     1482/1482
(100 %)
4 diff
(99.8 %id)
CB162784 Liver .b 1 to 490 11 to 500       490/500
(98 %)
0 diff
(100 %id)
AK298421 Liver .b 4 to 1240 1 to 1237 exact tiling clone,   1237/1237
(100 %)
3 diff
(99.8 %id)
DC362760 Liver .b 4 to 555 1 to 552       552/552
(100 %)
1 diff
(99.9 %id)
DC362843 Liver .b 4 to 569 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
NM_001190907.1   .b 5 to 2631 1 to 2627 exact RefSeq,   2627/2627
(100 %)
0 diff
(100 %id)
DA642388 Liver .b 40 to 676 2 to 639   capped   638/638
(100 %)
3 diff
(99.6 %id)
DR003925 Liver .b 62 to 668 1 to 607       607/610
(99 %)
1 diff
(99.9 %id)
DA036283 breast .b 66 to 611 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
BP243504 Liver .b 76 to 657 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DR003938 Liver .b 82 to 798 1 to 717       717/717
(100 %)
5 diff
(99.4 %id)
AV645816 corresponding non cancerous liver tissue .b 383 to 1147 1 to 755     Submitted on the opposite strand 755/773
(97 %)
49 diff
(93.7 %id)
BG206204   .b 950 to 1064 115 to 1     Submitted on the opposite strand 115/115
(100 %)
1 diff
(99.2 %id)
BG210362   .b 950 to 1078 1 to 129   tiling clone,   129/129
(100 %)
1 diff
(99.3 %id)
TI_1607544827   .b 1151 to 2313 1228 to 72   tiling clone,   1157/1291
(89 %)
0 diff
(100 %id)
CB111926 Liver .b 1167 to 1740 1 to 574   tiling clone,   574/574
(100 %)
0 diff
(100 %id)
CB120354 Liver .b 1458 to 2047 1 to 590       590/590
(100 %)
1 diff
(99.9 %id)
BP294410 Liver .b 1908 to 2345 1 to 438   tiling clone, AAA Possibly primed on the genome, locally A rich (19/21 A in genome downstream of last aligned base) 438/438
(100 %)
1 diff
(99.8 %id)
C21009   .b 2450 to 2629 1 to 180   tiling clone,   180/180
(100 %)
0 diff
(100 %id)
NM_001190906.1   .c 1 to 2587 1 to 2587 exact RefSeq,   2587/2587
(100 %)
0 diff
(100 %id)
AK298428 Liver .c 35 to 1314 1 to 1280 exact tiling clone,   1280/1280
(100 %)
3 diff
(99.8 %id)
DC362797 Liver .c 35 to 618 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
DC363024 Liver .c 36 to 610 1 to 575       575/575
(100 %)
0 diff
(100 %id)
AV689192 hepatocellular carcinoma .c 750 to 1118 1 to 366       366/372
(98 %)
4 diff
(99.0 %id)
AV693448 hepatocellular carcinoma .c 750 to 1118 1 to 366       366/372
(98 %)
4 diff
(99.0 %id)
AK058142 testis .d 1 to 1881 1 to 1208   available from FLJ, Suspected internal deletion 1208/1208
(100 %)
2 diff
(99.9 %id)
FM160741 testis .d 1 to 1092 1 to 1092   tiling clone,   1092/1092
(100 %)
0 diff
(100 %id)
DC362901 Liver .d 509 to 1045 1 to 538       538/538
(100 %)
1 diff
(99.9 %id)
DA639780 Liver .d 537 to 1046 11 to 520   capped   510/510
(100 %)
2 diff
(99.7 %id)
DA641184 Liver .d 537 to 1058 10 to 531   capped   522/522
(100 %)
0 diff
(100 %id)
DB187361 liver, tumor tissue .d 537 to 1092 8 to 563   capped   556/556
(100 %)
0 diff
(100 %id)
AU099126   .d 568 to 867 1 to 300       300/300
(100 %)
3 diff
(99.0 %id)
AU104278   .d 568 to 617 1 to 50       50/50
(100 %)
2 diff
(96.0 %id)
T68663 Liver .e 1 to 321 1 to 325   tiling clone,   325/325
(100 %)
7 diff
(97.9 %id)
T68583 Liver .e 1640 to 2067 426 to 1   tiling clone,   426/426
(100 %)
12 diff
(97.2 %id)
FM160743 testis .f 1 to 566 1 to 566 exact tiling clone,   566/566
(100 %)
0 diff
(100 %id)
AI033123 liver and spleen .g 1 to 486 486 to 1 D2G F12L K13S P14Q L28Y ... tiling clone,   486/486
(100 %)
7 diff
(98.6 %id)
BU561106 testis .h 1 to 435 1 to 435 A13V L16R tiling clone,   435/468
(92 %)
6 diff
(98.8 %id)
AI198697   .h 51 to 437 384 to 3       382/384
(99 %)
0 diff
(100 %id)
AI656277 pooled germ cell tumors .h 73 to 433 363 to 3   tiling clone,   361/373
(96 %)
0 diff
(100 %id)
AI652102 pooled germ cell tumors .h 105 to 433 330 to 2       329/330
(99 %)
0 diff
(100 %id)
AI191980   .h 222 to 437 224 to 9   tiling clone,   216/224
(96 %)
0 diff
(100 %id)
FM160742 testis Gene AKR1D1, variant not shown         Suspected internal deletion, this clone was ignored    
AV649163 corresponding non cancerous liver tissue Gene AKR1D1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV653393 corresponding non cancerous liver tissue Gene AKR1D1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV657839 corresponding non cancerous liver tissue Gene AKR1D1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BJ993575 hepatoblastoma Gene AKR1D1, variant not shown         Suspected internal deletion, this clone was ignored    
BJ993576 hepatoblastoma Gene AKR1D1, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC