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Gene AKR1C4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
39 supporting clones for gene AKR1C4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK314988 liver, tumor tissue .a 1 to 1045 2 to 1046 Q91* tiling clone,   1046/1046
(100 %)
3 diff
(99.8 %id)
DB188380 liver, tumor tissue .a 1 to 577 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
BG616798 Liver .a 40 to 765 1 to 735       735/742
(99 %)
20 diff
(97.4 %id)
BC020744 Liver .a 41 to 1232 1 to 1192 C170Y Q250R tiling clone, available from MGC, AAA   1192/1192
(100 %)
4 diff
(99.7 %id)
BX283533 Liver .a 41 to 423 1 to 383       383/383
(100 %)
2 diff
(99.5 %id)
AV646269 corresponding non cancerous liver tissue .a 41 to 462 1 to 422     Submitted on the opposite strand 422/422
(100 %)
1 diff
(99.8 %id)
BG616759 Liver .a 41 to 873 1 to 834       834/835
(99 %)
20 diff
(97.7 %id)
NM_001818.2   .a 41 to 1234 1 to 1194 exact RefSeq,   1194/1194
(100 %)
0 diff
(100 %id)
BM825023 Ascites, stomach .a 41 to 745 1 to 705       705/705
(100 %)
0 diff
(100 %id)
BG563425 Liver .a 43 to 747 1 to 714       714/965
(73 %)
38 diff
(96.1 %id)
BG616711 Liver .a 44 to 706 1 to 663       663/664
(99 %)
1 diff
(99.9 %id)
T72351 Liver .a 64 to 374 1 to 314       314/323
(97 %)
5 diff
(98.5 %id)
AV653980 corresponding non cancerous liver tissue .a 65 to 478 1 to 414     Submitted on the opposite strand 414/414
(100 %)
1 diff
(99.8 %id)
AV694764 hepatocellular carcinoma .a 66 to 693 1 to 621       621/621
(100 %)
7 diff
(98.9 %id)
S68287   .a 67 to 1232 1 to 1167 Q250R     1167/1167
(100 %)
4 diff
(99.7 %id)
AV691883 hepatocellular carcinoma .a 69 to 697 1 to 622       622/634
(98 %)
9 diff
(98.6 %id)
AV694983 hepatocellular carcinoma .a 69 to 463 1 to 393       396/399
(99 %)
4 diff
(99.0 %id)
AV645550 corresponding non cancerous liver tissue .a 73 to 752 1 to 678     Submitted on the opposite strand 678/687
(98 %)
13 diff
(98.2 %id)
AB031085 Liver .a 74 to 1045 1 to 972 Q250R tiling clone,   972/972
(100 %)
1 diff
(99.9 %id)
AB045829 Liver .a 74 to 1064 1 to 991 S145C Q250R L311V     991/991
(100 %)
4 diff
(99.6 %id)
EL735624 mixed .a 74 to 683 1 to 606       606/606
(100 %)
8 diff
(98.7 %id)
TI_1948221922   .a 74 to 1002 122 to 1057       934/1269
(73 %)
26 diff
(98.0 %id)
TI_1948222103   .a 74 to 1050 124 to 1091 C170Y P239Q V240F L241F C242V ... fully sequenced, AAA   898/1021
(87 %)
32 diff
(96.9 %id)
T74919 Liver .a 75 to 303 1 to 229       229/229
(100 %)
0 diff
(100 %id)
T62735 Liver .a 76 to 387 1 to 314       314/463
(67 %)
4 diff
(99.2 %id)
M33375   .a 76 to 1232 1 to 1157       1157/1157
(100 %)
3 diff
(99.8 %id)
D26125 Liver .a 78 to 1232 1 to 1155       1155/1155
(100 %)
2 diff
(99.9 %id)
T67623 Liver .a 156 to 518 1 to 368       368/457
(80 %)
12 diff
(97.4 %id)
AV692764 hepatocellular carcinoma .a 321 to 693 1 to 366       366/366
(100 %)
8 diff
(97.9 %id)
TI_1948222104   .a 613 to 1044 556 to 125   fully sequenced,   432/556
(77 %)
1 diff
(99.9 %id)
T62885 Liver .a 696 to 1232 542 to 1       542/550
(98 %)
11 diff
(98.0 %id)
T67506 Liver .a 808 to 1221 429 to 1       429/431
(99 %)
21 diff
(95.2 %id)
T74867 Liver .a 854 to 1209 359 to 1       359/359
(100 %)
5 diff
(98.7 %id)
T73242 Liver .a 890 to 1265 385 to 6   tiling clone,   378/391
(96 %)
4 diff
(99.0 %id)
BG196882   .b 1 to 704 1 to 706   tiling clone,   706/780
(90 %)
19 diff
(97.6 %id)
BG188594   .b 2 to 784 1 to 779 P26L L115H K136X V137G M151W ... tiling clone,   779/782
(99 %)
16 diff
(98.0 %id)
DW466509 Liver .c-u 1 to 336 351 to 17 exact tiling clone,   335/351
(95 %)
0 diff
(100 %id)
BG204534   Gene AKR1C4, variant not shown         This clone was ignored    
BG215635   Gene AKR1C4, variant not shown         This clone was ignored    
AV687340 hepatocellular carcinoma Gene AKR1C4, variant not shown         Suspected internal deletion, this clone was ignored    
AV658612 corresponding non cancerous liver tissue Gene AKR1C4, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV659930 corresponding non cancerous liver tissue Gene AKR1C4, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
T73091 Liver Gene AKR1C4, variant not shown         This clone was ignored    
T73188 Liver Gene AKR1C4, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C