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Gene ADAMTS6TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
53 supporting clones for gene ADAMTS6 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AY692424   .a 1 to 7261 1 to 7262 Y229H E426G tiling clone,   7262/7262
(100 %)
8 diff
(99.9 %id)
NM_197941.2   .a 1 to 7267 1 to 7267 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 7267/7267
(100 %)
0 diff
(100 %id)
CN305047 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 293 to 1016 1 to 724   tiling clone,   724/724
(100 %)
5 diff
(99.4 %id)
BG013211 placenta_normal .a 835 to 1239 405 to 6       400/431
(92 %)
3 diff
(99.4 %id)
BG013212 placenta_normal .a 835 to 1239 413 to 17       397/439
(90 %)
3 diff
(99.4 %id)
BX952790   .a 1603 to 1814 1 to 211       211/211
(100 %)
2 diff
(99.1 %id)
CR749356 uterus endothel, primary cell culture .a 3223 to 7261 1 to 4039   available from DKFZ, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 4039/4039
(100 %)
1 diff
(100.0 %id)
AY692423   .a 3355 to 7267 1 to 3913   tiling clone, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 3913/3913
(100 %)
6 diff
(99.9 %id)
CR746584 pooled .a 3501 to 3911 1 to 411       411/411
(100 %)
0 diff
(100 %id)
AA907572 pooled .a 3878 to 4342 472 to 8       465/472
(98 %)
1 diff
(99.8 %id)
DA854135 placenta .a 3920 to 4495 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
CN268307 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3984 to 4453 1 to 470       470/470
(100 %)
0 diff
(100 %id)
TI_158432775   .a 4060 to 4727 764 to 94   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 671/932
(71 %)
9 diff
(99.1 %id)
CF528606 placenta .a 4192 to 4727 553 to 18   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 536/536
(100 %)
0 diff
(100 %id)
AA333577 Embryo, 8 weeks .a 4391 to 4665 1 to 276       276/276
(100 %)
1 diff
(99.7 %id)
AW751628 colon .a 5070 to 5568 1 to 498       498/498
(100 %)
20 diff
(96.0 %id)
W05436 lung .a 5245 to 5498 1 to 251       251/257
(97 %)
4 diff
(98.5 %id)
CX753429 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 5259 to 5974 1 to 708       708/865
(81 %)
12 diff
(98.7 %id)
AA318687 Spleen .a 5501 to 5862 1 to 361       361/361
(100 %)
8 diff
(97.8 %id)
BC071654 Liver, adenocarcinoma .a 5554 to 7265 1 to 1712   available from MGC, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 1712/1712
(100 %)
0 diff
(100 %id)
BG117513 adenocarcinoma, cell line, Liver .a 5554 to 6294 1 to 735   available from MGC,   735/951
(77 %)
13 diff
(98.7 %id)
BF149418 skin .a 5746 to 6068 1 to 324       324/324
(100 %)
2 diff
(99.4 %id)
BC010563 Brain, glioblastoma with EGFR amplification .a 5807 to 7265 1 to 1459   available from MGC, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 1459/1459
(100 %)
0 diff
(100 %id)
BF344144 brain, glioblastoma with EGFR amplification .a 5807 to 6593 1 to 783   available from MGC,   783/913
(85 %)
22 diff
(97.6 %id)
AW891130 nervous_tumor .a 5854 to 6213 1 to 360       360/362
(99 %)
12 diff
(96.7 %id)
W79069 heart .a 5883 to 6313 1 to 436       436/438
(99 %)
7 diff
(98.5 %id)
W02603 liver and spleen .a 5927 to 6510 1 to 583       583/631
(92 %)
8 diff
(98.8 %id)
H63324 liver and spleen .a 5928 to 6314 1 to 393       393/396
(99 %)
12 diff
(97.0 %id)
CB160428 Liver .a 6028 to 6574 1 to 547       547/547
(100 %)
1 diff
(99.9 %id)
N95640 liver and spleen .a 6091 to 6575 1 to 491       491/491
(100 %)
9 diff
(98.2 %id)
AA773642 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 6177 to 6654 1 to 477       477/477
(100 %)
4 diff
(99.2 %id)
CF618743 Pooled Chondrosarcoma Tumor cells .a 6333 to 7146 9 to 834       826/866
(95 %)
20 diff
(97.7 %id)
BF367048 placenta_normal .a 6507 to 6684 1 to 176       176/179
(98 %)
9 diff
(95.0 %id)
N71063 lung .a 6828 to 7265 439 to 1       439/441
(99 %)
2 diff
(99.6 %id)
W94295 heart .a 6844 to 7265 424 to 1       424/424
(100 %)
2 diff
(99.6 %id)
N66037 liver and spleen .a 6929 to 7266 352 to 7       346/360
(96 %)
0 diff
(100 %id)
H63245 liver and spleen .a 6985 to 7262 279 to 2       278/279
(99 %)
0 diff
(100 %id)
N73616 liver and spleen .a 7054 to 7265 213 to 1       213/213
(100 %)
2 diff
(99.1 %id)
AY692425   .b 1 to 3507 1 to 3507 exact tiling clone,   3507/3507
(100 %)
3 diff
(100.0 %id)
AY692426   .c 1 to 2747 1 to 2747   tiling clone,   2747/2747
(100 %)
2 diff
(100.0 %id)
DR005071 placenta .c 2581 to 3057 1 to 477   tiling clone,   477/477
(100 %)
1 diff
(99.8 %id)
DA237935 brain .c 2770 to 3318 2 to 550   tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
DA852781 placenta .c 3210 to 3758 2 to 550   tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
AY692422   .d 1 to 860 1 to 860   tiling clone,   860/860
(100 %)
0 diff
(100 %id)
BQ013157 placenta .d 16 to 481 467 to 2   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 466/467
(99 %)
0 diff
(100 %id)
BX473826   .d 43 to 751 1 to 709     Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 709/709
(100 %)
4 diff
(99.5 %id)
DW437694 Liver .d 49 to 278 18 to 248       231/248
(93 %)
8 diff
(96.8 %id)
BM704345 eye, Retina Foveal and Macular .d 76 to 250 1 to 173   fully sequenced,   173/173
(100 %)
1 diff
(99.5 %id)
AI697838 carcinoid, lung .d 84 to 468 385 to 1       385/385
(100 %)
0 diff
(100 %id)
AI436670 pooled .d 86 to 478 393 to 1       393/393
(100 %)
0 diff
(100 %id)
DW460539 Liver .d 159 to 278 18 to 137       120/137
(87 %)
8 diff
(94.2 %id)
BM671548 eye, Retina Foveal and Macular .d 220 to 476 255 to 1   fully sequenced,   255/255
(100 %)
1 diff
(99.7 %id)
AB209685 brain .d 504 to 7459 1 to 6956 exact tiling clone,   6956/6956
(100 %)
1 diff
(100.0 %id)
BX473827   .d 6846 to 7455 629 to 20   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 610/610
(100 %)
1 diff
(99.9 %id)
BJ991212 hepatoblastoma .e 1 to 586 1 to 586   tiling clone,   586/586
(100 %)
0 diff
(100 %id)
BJ991213 hepatoblastoma .e 1474 to 2013 540 to 1   tiling clone,   540/540
(100 %)
0 diff
(100 %id)
AK131039 testis .f 1 to 1322 1 to 1322 exact tiling clone, available from FLJ,   1322/1322
(100 %)
2 diff
(99.9 %id)
BG623354 placenta .g-u 1 to 640 1 to 638 exact tiling clone, available from MGC,   638/764
(83 %)
12 diff
(98.5 %id)
BC020916 placenta .g-u 2 to 621 1 to 620 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 620/621
(99 %)
3 diff
(99.6 %id)
AF140674   Gene ADAMTS6, variant not shown         This clone was ignored    
CF995186 Human Placenta, placenta Gene ADAMTS6, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C