To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene ACSL4andKCNE1LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
485 supporting clones for gene ACSL4andKCNE1L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_022977.2   .a 1 to 5333 1 to 5333 exact RefSeq, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 5333/5333
(100 %)
0 diff
(100 %id)
Y13058 retina, neuroepithelium .a 162 to 667 23 to 528   tiling clone,   506/528
(95 %)
6 diff
(98.9 %id)
H92506 eye, retina .a 196 to 541 1 to 347     Submitted on the opposite strand 347/351
(98 %)
8 diff
(97.8 %id)
DA808413 brain .a 422 to 979 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
BG217092   .a 615 to 1214 613 to 13     Submitted on the opposite strand 601/616
(97 %)
16 diff
(97.5 %id)
TI_1948095494   .a 620 to 1566 127 to 1076   tiling clone,   950/1221
(77 %)
26 diff
(97.9 %id)
TI_1948095800   .a 620 to 1557 118 to 1058   tiling clone,   941/1210
(77 %)
35 diff
(97.2 %id)
TI_1948095957   .a 620 to 1557 117 to 1054   tiling clone,   938/1187
(79 %)
19 diff
(98.4 %id)
TI_1948095958   .a 1765 to 2640 1006 to 124   tiling clone,   883/1147
(76 %)
23 diff
(98.0 %id)
TI_1948095495   .a 1770 to 2640 995 to 124   tiling clone,   872/1133
(76 %)
20 diff
(98.3 %id)
TI_1948095801   .a 1778 to 2640 1006 to 123       884/1170
(75 %)
42 diff
(96.5 %id)
AK307566   .b 1 to 1949 1 to 1949   tiling clone,   1949/1949
(100 %)
3 diff
(99.9 %id)
DA682881   .b 2 to 809 2 to 810   capped   809/809
(100 %)
2 diff
(99.8 %id)
AA148880   .b 119 to 483 1 to 369   tiling clone,   369/376
(98 %)
4 diff
(99.0 %id)
DB322691   .b 1475 to 1949 474 to 1       474/505
(93 %)
6 diff
(98.9 %id)
AA148674   .b 4799 to 5184 393 to 1   tiling clone,   393/407
(96 %)
9 diff
(97.8 %id)
BJ997017 hepatoblastoma .c 1 to 402 5 to 406   tiling clone,   406/406
(100 %)
0 diff
(100 %id)
BJ997018 hepatoblastoma .c 1841 to 2239 400 to 1   tiling clone,   400/400
(100 %)
1 diff
(99.8 %id)
DR004263 placenta .d 1 to 787 8 to 793   tiling clone,   786/793
(99 %)
8 diff
(99.0 %id)
DA407325 thalamus .d 76 to 613 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
BG771910 testis .d 95 to 719 1 to 625       625/649
(96 %)
9 diff
(98.7 %id)
AK292070 stomach .d 119 to 2484 1 to 2366 exact     2366/2366
(100 %)
1 diff
(100.0 %id)
DC392547 stomach .d 119 to 663 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
DA456537 tongue, tumor tissue .d 120 to 703 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
AB061713   .d 121 to 5035 1 to 4917 A403G tiling clone,   4917/4920
(99 %)
10 diff
(99.8 %id)
DA051638   .d 122 to 674 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BG717121 testis .d 132 to 720 1 to 589       589/659
(89 %)
10 diff
(98.5 %id)
DA434151 tongue, tumor tissue .d 133 to 659 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
BX474006   .d 136 to 621 1 to 486       486/486
(100 %)
2 diff
(99.6 %id)
DA478882   .d 140 to 705 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA315868 hippocampus .d 141 to 681 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB230112 trachea .d 141 to 736 2 to 597   capped   596/604
(98 %)
0 diff
(100 %id)
DB278362 uterus .d 142 to 607 2 to 467   capped   466/466
(100 %)
0 diff
(100 %id)
DA851835 placenta .d 146 to 699 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
AL691592   .d 148 to 818 1 to 671       671/671
(100 %)
2 diff
(99.8 %id)
AL708850 human skeletal muscle .d 148 to 666 1 to 519       519/519
(100 %)
1 diff
(99.9 %id)
CB995125 placenta, pre-eclamptic placenta .d 150 to 765 29 to 645       617/657
(93 %)
12 diff
(98.2 %id)
CB995218 placenta, pre-eclamptic placenta .d 150 to 667 29 to 560       532/913
(58 %)
22 diff
(97.6 %id)
CN310701 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 159 to 819 1 to 661       661/661
(100 %)
4 diff
(99.4 %id)
BX472431   .d 159 to 820 11 to 672       662/672
(98 %)
8 diff
(98.9 %id)
AB061714   .d 161 to 2364 1 to 2204 A403G     2204/2204
(100 %)
2 diff
(100.0 %id)
BQ050038 lymph, lymphoma, cell line .d 163 to 843 1 to 683       683/1094
(62 %)
3 diff
(99.8 %id)
DA651891   .d 168 to 749 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA455436 tongue, tumor tissue .d 169 to 740 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA675707   .d 169 to 748 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA240954 brain .d 171 to 758 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA461074 tongue, tumor tissue .d 171 to 720 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA655139   .d 171 to 736 2 to 567   capped   566/567
(99 %)
0 diff
(100 %id)
DA655192   .d 171 to 732 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA720961   .d 171 to 732 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA855827 placenta .d 171 to 731 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB216426 trachea .d 171 to 626 2 to 458   capped   457/457
(100 %)
1 diff
(99.8 %id)
DB289467 uterus .d 171 to 724 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
Y12777 placenta .d 173 to 2343 23 to 2193 Y140C tiling clone,   2171/2193
(98 %)
7 diff
(99.7 %id)
CN310702 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 186 to 898 1 to 713       713/713
(100 %)
0 diff
(100 %id)
DB076210 testis .d 188 to 591 2 to 405   capped   404/404
(100 %)
1 diff
(99.8 %id)
CN310699 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 192 to 525 1 to 334       334/334
(100 %)
1 diff
(99.8 %id)
DA851422 placenta .d 197 to 766 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DB225345 trachea .d 199 to 644 2 to 448   capped   447/447
(100 %)
1 diff
(99.8 %id)
DA492096 brain .d 200 to 769 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DC424572 placenta .d 200 to 908 1 to 716       712/716
(99 %)
8 diff
(98.9 %id)
DA960956 Spleen .d 200 to 746 2 to 549   capped   548/548
(100 %)
8 diff
(98.6 %id)
DA406489 thalamus .d 201 to 736 2 to 536   capped   535/540
(99 %)
2 diff
(99.7 %id)
DB066443 testis .d 201 to 732 2 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
DB084347 testis .d 201 to 777 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
AL529378 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .d 204 to 1238 19 to 1040       1024/1065
(96 %)
24 diff
(97.8 %id)
DA650406   .d 206 to 746 12 to 552   capped   541/541
(100 %)
0 diff
(100 %id)
DB229696 trachea .d 211 to 789 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA747021   .d 218 to 781 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DC427352 placenta .d 1948 to 2460 514 to 1       514/514
(100 %)
4 diff
(99.3 %id)
R28548 placenta .d 3101 to 3361 1 to 261   tiling clone,   261/261
(100 %)
1 diff
(99.7 %id)
DA828557 placenta .d 3193 to 3875 2 to 688   capped   687/687
(100 %)
10 diff
(98.6 %id)
AI950028 2 pooled tumors (clear cell type), Kidney .d 3204 to 3710 507 to 1       507/507
(100 %)
1 diff
(99.9 %id)
BF541711 hypernephroma, Kidney .d 3529 to 4224 1 to 705       705/753
(93 %)
45 diff
(94.1 %id)
AA169527   .d 3532 to 3944 1 to 418       418/418
(100 %)
6 diff
(98.6 %id)
BG498561 adenocarcinoma, Prostate .d 3555 to 4394 1 to 831       831/835
(99 %)
33 diff
(96.1 %id)
BY997223   .d 3584 to 4210 9 to 635       627/635
(98 %)
6 diff
(99.1 %id)
CB216321 normal endometrium, mid-secretory phase,cycle day 23, uterus .d 3599 to 4210 1 to 612       612/612
(100 %)
1 diff
(99.9 %id)
AV686736 hepatocellular carcinoma .d 3600 to 3970 1 to 363       363/366
(99 %)
5 diff
(98.7 %id)
AV698560 hepatocellular carcinoma .d 3600 to 3970 1 to 364       364/367
(99 %)
4 diff
(99.0 %id)
DB460143 testis .d 3617 to 4070 1 to 454       454/454
(100 %)
1 diff
(99.8 %id)
BG778535 adenocarcinoma, Prostate .d 3636 to 4428 1 to 789       789/790
(99 %)
19 diff
(97.6 %id)
BF130295 hypernephroma, Kidney .d 3742 to 4255 1 to 503       503/796
(63 %)
24 diff
(97.0 %id)
CD708091 normal nasopharynx .d 3768 to 4135 21 to 386       366/386
(94 %)
6 diff
(98.5 %id)
BF219248 brain, glioblastoma .d 3776 to 4427 1 to 661       661/780
(84 %)
27 diff
(96.6 %id)
CN310697 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 3794 to 4409 8 to 622       615/622
(98 %)
6 diff
(99.1 %id)
BF672240 muscle (skeletal) .d 3819 to 4536 1 to 713       713/714
(99 %)
14 diff
(98.1 %id)
BQ221330 large cell carcinoma, lung .d 3822 to 4457 9 to 655       647/780
(82 %)
18 diff
(97.7 %id)
AW936447 denis_drash .d 3839 to 4236 398 to 2     Submitted on the opposite strand 397/560
(70 %)
0 diff
(100 %id)
CN310691 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 3870 to 4533 7 to 670       664/670
(99 %)
0 diff
(100 %id)
BY997417   .d 3877 to 4564 21 to 710       690/710
(97 %)
6 diff
(99.2 %id)
BQ219104 melanotic melanoma, skin .d 3898 to 4776 1 to 888       888/894
(99 %)
15 diff
(98.4 %id)
AA449659   .d 3899 to 4366 1 to 468       468/468
(100 %)
1 diff
(99.8 %id)
CB161272 Liver .d 3906 to 4460 1 to 555       555/555
(100 %)
6 diff
(99.0 %id)
BQ438590 testis .d 3913 to 4737 1 to 829       829/829
(100 %)
26 diff
(96.9 %id)
AA251884 germinal center B cell .d 3917 to 4111 15 to 209       195/209
(93 %)
6 diff
(97.2 %id)
AA258995 germinal center B cell .d 3917 to 4447 1 to 529       529/529
(100 %)
2 diff
(99.7 %id)
AL574234 placenta, Placenta Cot 25-normalized .d 3920 to 5006 1082 to 1       1082/1089
(99 %)
30 diff
(97.3 %id)
BG623340 placenta .d 3920 to 4689 1 to 766       766/767
(99 %)
12 diff
(98.5 %id)
CD523387 pooled .d 3927 to 4440 1 to 522       522/693
(75 %)
8 diff
(98.9 %id)
Z43734 brain, total brain .d 3935 to 4263 1 to 329       329/329
(100 %)
0 diff
(100 %id)
BE177625 head_neck .d 3973 to 4651 1 to 668       668/673
(99 %)
22 diff
(96.8 %id)
AW578274 colon_normal .d 3975 to 4261 1 to 286       286/299
(95 %)
3 diff
(99.0 %id)
EB385969 eye, optic nerve .d 3986 to 4800 1 to 815   tiling clone,   815/815
(100 %)
0 diff
(100 %id)
BU928881 brain, glioblastoma .d 4012 to 4875 1 to 881       881/898
(98 %)
28 diff
(96.9 %id)
BG621169 placenta .d 4017 to 4794 1 to 786       786/787
(99 %)
18 diff
(97.8 %id)
AA094592   .d 4024 to 4300 1 to 275       275/278
(98 %)
4 diff
(98.6 %id)
BE620455 large cell carcinoma, undifferentiated, lung .d 4034 to 4799 1 to 752       752/782
(96 %)
17 diff
(97.9 %id)
CB117467 Liver .d 4068 to 4597 1 to 530       530/530
(100 %)
2 diff
(99.7 %id)
BX092925 placenta .d 4079 to 4875 1 to 797       797/797
(100 %)
4 diff
(99.5 %id)
R26216 placenta .d 4079 to 4517 1 to 440       440/440
(100 %)
12 diff
(97.3 %id)
BG527642 lung, mucoepidermoid carcinoma .d 4094 to 4827 1 to 732       732/737
(99 %)
5 diff
(99.4 %id)
BG674181 skin .d 4107 to 4949 1 to 842       842/859
(98 %)
8 diff
(99.1 %id)
BF217078 brain, glioblastoma .d 4108 to 4810 1 to 708       708/875
(80 %)
20 diff
(97.8 %id)
BG924677 cartilage .d 4116 to 4593 154 to 631       478/563
(84 %)
6 diff
(99.0 %id)
BF928208 nervous_tumor .d 4118 to 4512 1 to 394       394/394
(100 %)
16 diff
(96.0 %id)
AA484810 Liver .d 4133 to 4622 1 to 490       490/490
(100 %)
1 diff
(99.8 %id)
TI_149292018   .d 4138 to 5035 972 to 93   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 880/935
(94 %)
18 diff
(98.1 %id)
BQ022601 placenta .d 4146 to 4409 1 to 268     Submitted on the opposite strand 268/268
(100 %)
4 diff
(98.6 %id)
BU689618 Human Lung Epithelial cells, lung .d 4151 to 4871 11 to 730     Submitted on the opposite strand 720/753
(95 %)
3 diff
(99.7 %id)
AI632904 carcinoid, lung .d 4159 to 4684 1 to 526     Submitted on the opposite strand 526/526
(100 %)
2 diff
(99.7 %id)
BG413604 pooled .d 4160 to 4691 1 to 532     Submitted on the opposite strand 532/532
(100 %)
0 diff
(100 %id)
H82144 melanocyte .d 4183 to 4633 7 to 470       464/476
(97 %)
17 diff
(96.5 %id)
N33823 melanocyte .d 4183 to 4407 1 to 225       225/225
(100 %)
0 diff
(100 %id)
N42718 melanocyte .d 4184 to 4594 1 to 414   fully sequenced,   414/414
(100 %)
3 diff
(99.3 %id)
CN310696 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 4192 to 4760 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
AV706441 adrenal gland .d 4198 to 4868 10 to 679       670/752
(89 %)
12 diff
(98.5 %id)
BE972674 testis .d 4199 to 4859 1 to 653       653/797
(81 %)
22 diff
(97.3 %id)
CN310698 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 4200 to 4688 1 to 489       489/489
(100 %)
0 diff
(100 %id)
TI_154103867   .d 4225 to 5035 885 to 84   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 802/944
(84 %)
19 diff
(98.0 %id)
AW393101 stomach .d 4228 to 4805 578 to 2       577/578
(99 %)
0 diff
(100 %id)
AW393121 stomach .d 4228 to 4837 618 to 10       609/620
(98 %)
0 diff
(100 %id)
TI_149315912   .d 4234 to 5040 882 to 85   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 798/951
(83 %)
10 diff
(99.0 %id)
H13717 placenta .d 4236 to 4613 1 to 388       388/398
(97 %)
13 diff
(96.8 %id)
BI859933 breast, mammary adenocarcinoma, cell line .d 4237 to 5042 1 to 799       799/815
(98 %)
19 diff
(97.7 %id)
TI_57188842   .d 4237 to 5042 48 to 846       799/890
(89 %)
19 diff
(97.9 %id)
BF968348 adrenal cortex carcinoma, cell line, adrenal gland .d 4243 to 4952 1 to 700       700/916
(76 %)
17 diff
(98.2 %id)
BM930104 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 4251 to 4666 1 to 416   fully sequenced, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 416/416
(100 %)
0 diff
(100 %id)
BE620684 large cell carcinoma, undifferentiated, lung .d 4258 to 4990 732 to 1       732/735
(99 %)
5 diff
(99.4 %id)
H01277 placenta .d 4266 to 4649 1 to 391       391/392
(99 %)
12 diff
(97.0 %id)
DA830803 placenta .d 4272 to 4385 740 to 865   capped   795/871
(91 %)
33 diff
(96.3 %id)
R28456 placenta .d 4277 to 4638 1 to 371       371/371
(100 %)
14 diff
(96.3 %id)
BM974237 lung .d 4277 to 5035 771 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 753/753
(100 %)
6 diff
(99.3 %id)
H04580 placenta .d 4285 to 4811 1 to 517       517/572
(90 %)
17 diff
(97.1 %id)
CB243526 Human Lung Epithelial cells, lung .d 4290 to 5035 764 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 746/746
(100 %)
3 diff
(99.6 %id)
CB136326 Liver .d 4312 to 4903 1 to 593       593/593
(100 %)
1 diff
(99.9 %id)
BG435487 placenta .d 4326 to 5030 1 to 700       700/869
(80 %)
25 diff
(97.2 %id)
AA648617 Ewing's sarcoma .d 4331 to 4770 1 to 440       440/440
(100 %)
3 diff
(99.4 %id)
BU634080 cell lines, Chondrosarcoma .d 4338 to 5035 716 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 698/698
(100 %)
0 diff
(100 %id)
BU927865 mixed (pool of 40 RNAs) .d 4348 to 5035 1 to 688       688/693
(99 %)
3 diff
(99.6 %id)
H12572 placenta .d 4354 to 4724 1 to 380   fully sequenced,   380/380
(100 %)
15 diff
(96.1 %id)
BF247645 hypernephroma, Kidney .d 4357 to 4767 1 to 416       416/764
(54 %)
14 diff
(98.2 %id)
BQ016115 lung, Metastatic Chondrosarcoma .d 4364 to 5035 690 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 672/672
(100 %)
1 diff
(99.9 %id)
CB306581 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 4369 to 5040 690 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 672/672
(100 %)
1 diff
(99.9 %id)
CA446060 Chondrosarcoma, Left Pelvis .d 4380 to 5035 674 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 656/656
(100 %)
0 diff
(100 %id)
AW967690   .d 4393 to 5034 642 to 1     Submitted on the opposite strand 642/646
(99 %)
9 diff
(98.7 %id)
BE842717 stomach .d 4399 to 4510 1 to 112       112/112
(100 %)
2 diff
(98.3 %id)
TI_149289275   .d 4400 to 5035 728 to 94   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 635/635
(100 %)
4 diff
(99.4 %id)
BM970846 lung .d 4421 to 5035 632 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 614/614
(100 %)
3 diff
(99.6 %id)
AV721749 hypothalamus .d 4423 to 5035 26 to 634   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 609/634
(96 %)
6 diff
(99.1 %id)
TI_158435864   .d 4430 to 5035 704 to 97   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 608/1045
(58 %)
28 diff
(97.4 %id)
BQ447760 Knee, Osteoarthritic Cartilage .d 4441 to 5035 614 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 596/596
(100 %)
1 diff
(99.9 %id)
AI631863 Kidney .d 4454 to 5036 584 to 1       584/584
(100 %)
1 diff
(99.9 %id)
DB366009   .d 4456 to 5035 578 to 1       578/581
(99 %)
11 diff
(98.2 %id)
AW967694   .d 4458 to 5032 580 to 3     Submitted on the opposite strand 578/583
(99 %)
0 diff
(100 %id)
BU753153 placenta .d 4469 to 5035 583 to 18   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 566/566
(100 %)
1 diff
(99.9 %id)
EH317736   .d 4471 to 4549 1 to 79       79/79
(100 %)
4 diff
(95.0 %id)
EH344162   .d 4476 to 4549 1 to 74       74/75
(98 %)
1 diff
(98.7 %id)
R62511 placenta .d 4500 to 4789 1 to 295       295/296
(99 %)
10 diff
(96.7 %id)
AA173190   .d 4504 to 5036 535 to 1       535/547
(97 %)
6 diff
(99.0 %id)
BM684738 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 4522 to 4666 160 to 16   fully sequenced, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 145/145
(100 %)
0 diff
(100 %id)
BQ022679 placenta .d 4524 to 5040 534 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 516/516
(100 %)
1 diff
(99.9 %id)
BE466636 pooled germ cell tumors .d 4536 to 5037 503 to 2       502/503
(99 %)
0 diff
(100 %id)
AI572823 Kidney .d 4549 to 5035 487 to 1       487/487
(100 %)
5 diff
(99.0 %id)
N32505 melanocyte .d 4564 to 5035 480 to 1   fully sequenced,   480/480
(100 %)
9 diff
(98.2 %id)
N24946.
matches multiple genes
melanocyte .d 4565 to 5036 475 to 1     also hits gene FAM91A1 475/475
(100 %)
5 diff
(99.0 %id)
DB373108 placenta .d 4565 to 5040 475 to 1       475/475
(100 %)
7 diff
(98.6 %id)
AI359286 brain, glioblastoma (pooled) .d 4568 to 5035 468 to 1       468/468
(100 %)
0 diff
(100 %id)
DB541914 hippocampus .d 4569 to 5035 1 to 469     Submitted on the opposite strand 469/469
(100 %)
17 diff
(96.4 %id)
AI305180 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 4570 to 5035 466 to 1       466/466
(100 %)
0 diff
(100 %id)
AW440578 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 4572 to 5037 467 to 2       466/467
(99 %)
0 diff
(100 %id)
DB525586 testis .d 4594 to 5035 1 to 442     Submitted on the opposite strand 442/442
(100 %)
0 diff
(100 %id)
DB376135 placenta .d 4597 to 5035 436 to 1       436/436
(100 %)
10 diff
(97.8 %id)
DB537065 hippocampus .d 4598 to 5035 1 to 438     Submitted on the opposite strand 438/438
(100 %)
6 diff
(98.7 %id)
AI619785 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .d 4598 to 5035 437 to 1       437/437
(100 %)
1 diff
(99.8 %id)
DB516219 testis .d 4604 to 5033 1 to 430     Submitted on the opposite strand 430/432
(99 %)
4 diff
(99.1 %id)
AI540829 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d 4606 to 5035 430 to 1       430/430
(100 %)
0 diff
(100 %id)
AI263521 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 4616 to 5035 419 to 1       419/419
(100 %)
1 diff
(99.8 %id)
AI610538 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 4618 to 5036 419 to 1       419/419
(100 %)
0 diff
(100 %id)
AA633818   .d 4620 to 5033 414 to 1       414/414
(100 %)
0 diff
(100 %id)
AA258172 germinal center B cell .d 4625 to 4913 289 to 1       289/289
(100 %)
1 diff
(99.7 %id)
AI269401 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 4625 to 5037 413 to 1       413/413
(100 %)
0 diff
(100 %id)
DB547282 hippocampus .d 4628 to 5033 7 to 408     Submitted on the opposite strand 402/410
(98 %)
2 diff
(99.6 %id)
AA564168 normal prostate, Prostate .d 4641 to 4851 211 to 1       211/211
(100 %)
0 diff
(100 %id)
AI802974 pooled .d 4641 to 5039 398 to 1       398/398
(100 %)
5 diff
(98.8 %id)
AW131010 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d 4641 to 5040 401 to 1       401/401
(100 %)
1 diff
(99.8 %id)
BQ029083 lung, Metastatic Chondrosarcoma .d 4642 to 5035 412 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 394/394
(100 %)
2 diff
(99.5 %id)
BM151112 leukopheresis .d 4647 to 5035 405 to 17   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 389/389
(100 %)
2 diff
(99.5 %id)
BP397650 pancreatic islet .d 4648 to 5037 390 to 1       390/390
(100 %)
0 diff
(100 %id)
CD640410 pooled .d 4652 to 5035 1 to 384   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 384/384
(100 %)
2 diff
(99.5 %id)
AI691029 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d 4657 to 5023 411 to 45   AAA   367/376
(97 %)
0 diff
(100 %id)
H82050 melanocyte .d 4659 to 5014 361 to 1       361/361
(100 %)
7 diff
(98.1 %id)
TI_159723099   .d 4659 to 5035 461 to 85   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 377/992
(38 %)
1 diff
(99.9 %id)
CA944890 Human Lung Epithelial cells, lung .d 4659 to 5035 395 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 377/383
(98 %)
1 diff
(99.8 %id)
AW974390   .d 4663 to 5035 509 to 137   AAA Submitted on the opposite strand 373/374
(99 %)
7 diff
(98.2 %id)
AA831304 germinal center B cell .d 4673 to 5035 380 to 18   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 363/363
(100 %)
0 diff
(100 %id)
AW006907 Kidney .d 4682 to 5037 357 to 1       357/357
(100 %)
2 diff
(99.5 %id)
BQ008315 Chondrosarcoma, Left Pelvis .d 4683 to 5035 371 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 353/353
(100 %)
0 diff
(100 %id)
AA251792 germinal center B cell .d 4693 to 5035 343 to 1       343/343
(100 %)
0 diff
(100 %id)
H12573 placenta .d 4694 to 5039 356 to 1   fully sequenced,   356/356
(100 %)
12 diff
(96.7 %id)
AA169358   .d 4695 to 5034 343 to 1       343/346
(99 %)
4 diff
(98.9 %id)
AA921702 2 pooled tumors (clear cell type), Kidney .d 4701 to 5035 335 to 1       335/335
(100 %)
0 diff
(100 %id)
R26217 placenta .d 4704 to 5037 344 to 1       344/413
(83 %)
14 diff
(96.7 %id)
AW083407 colon, moderately differentiated adenocarcinoma .d 4705 to 5037 334 to 2       333/334
(99 %)
0 diff
(100 %id)
AI476545 colon, moderately-differentiated adenocarcinoma .d 4713 to 5035 323 to 1       323/323
(100 %)
0 diff
(100 %id)
R28686 placenta .d 4717 to 5036 325 to 1       325/327
(99 %)
11 diff
(96.7 %id)
AI282399 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 4722 to 5035 314 to 1       314/314
(100 %)
0 diff
(100 %id)
BE875402 large cell carcinoma, undifferentiated, lung .d 4732 to 5035 1 to 304   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 304/304
(100 %)
0 diff
(100 %id)
Z39796 brain, total brain .d 4738 to 5035 298 to 1       298/298
(100 %)
0 diff
(100 %id)
C01690   .d 4738 to 5037 1 to 300       300/303
(99 %)
5 diff
(98.4 %id)
AA761149 germinal center B cell .d 4738 to 5035 329 to 32   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 298/298
(100 %)
2 diff
(99.4 %id)
H01184 placenta .d 4776 to 5015 242 to 1       242/245
(98 %)
4 diff
(98.4 %id)
AW089807 ovary, tumor, 5 pooled (see description) .d 4784 to 5035 252 to 1       252/252
(100 %)
0 diff
(100 %id)
CN310694 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 4803 to 5035 1 to 233   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 233/233
(100 %)
0 diff
(100 %id)
AW131902 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d 4826 to 5037 213 to 2       212/213
(99 %)
0 diff
(100 %id)
AI367469 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d 4828 to 5035 208 to 1       208/208
(100 %)
0 diff
(100 %id)
BM144388 leukopheresis .d 4839 to 5042 216 to 12       205/216
(94 %)
0 diff
(100 %id)
H13670 placenta .d 4852 to 5019 169 to 1       169/169
(100 %)
5 diff
(97.1 %id)
H69470 liver and spleen .d 4855 to 5036 182 to 1     Submitted on the opposite strand 182/182
(100 %)
0 diff
(100 %id)
H69875 liver and spleen .d 4875 to 5035 1 to 161     Submitted on the opposite strand 161/161
(100 %)
1 diff
(99.4 %id)
AW381376 head_neck .d 4912 to 5015 104 to 1       104/105
(99 %)
2 diff
(98.1 %id)
AA736670 germinal center B cell .d 4953 to 5032 90 to 11   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 80/80
(100 %)
0 diff
(100 %id)
AF030555   .e 1 to 5022 1 to 5024 exact tiling clone, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 5024/5024
(100 %)
11 diff
(99.8 %id)
NM_004458.2   .e 2 to 5022 1 to 5021 exact RefSeq, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 5021/5021
(100 %)
0 diff
(100 %id)
AL036290 brain .e 107 to 308 1 to 202   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 202/224
(90 %)
1 diff
(99.6 %id)
DB238419 trachea .e 130 to 737 2 to 609   capped   608/608
(100 %)
0 diff
(100 %id)
DA328508 hippocampus .e 131 to 699 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA650076   .e 131 to 661 2 to 532   capped   531/532
(99 %)
1 diff
(99.9 %id)
BC034959 testis .e 139 to 5020 1 to 4882 exact available from MGC, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 4882/4884
(99 %)
5 diff
(99.9 %id)
DB450756 testis .e 139 to 631 1 to 494       494/494
(100 %)
3 diff
(99.4 %id)
BG720701 testis .e 139 to 706 6 to 572       567/620
(91 %)
12 diff
(98.1 %id)
AV693478 hepatocellular carcinoma .e 156 to 507 1 to 355       355/367
(96 %)
2 diff
(99.5 %id)
AV694590 hepatocellular carcinoma .e 156 to 507 1 to 355       355/367
(96 %)
2 diff
(99.5 %id)
DB074090 testis .e 161 to 699 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
AL701685 human skeletal muscle .e 162 to 800 1 to 640       640/640
(100 %)
4 diff
(99.4 %id)
DB449298 testis .e 163 to 573 1 to 413       413/417
(99 %)
8 diff
(98.1 %id)
DB235727 trachea .e 186 to 756 2 to 573   capped   572/572
(100 %)
5 diff
(99.2 %id)
DA942934 Spleen .e 189 to 774 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
DB290250 uterus .e 199 to 769 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA805541 brain .e 203 to 767 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
CN310695 embryonic stem cells, DMSO-treated H9 cellline .e 215 to 910 1 to 697       697/697
(100 %)
1 diff
(99.9 %id)
BM905932 leiomyosarcoma, uterus .e 255 to 1245 17 to 1010       996/1033
(96 %)
21 diff
(98.0 %id)
BG210726   .e 306 to 541 1 to 236       236/236
(100 %)
5 diff
(97.9 %id)
CV024218 mixed .e 318 to 828 1 to 511       511/511
(100 %)
0 diff
(100 %id)
BF958568 nervous_normal .e 383 to 740 1 to 355       355/355
(100 %)
3 diff
(99.2 %id)
BF960660 nervous_normal .e 432 to 912 490 to 9       482/490
(98 %)
1 diff
(99.8 %id)
BF962831 nervous_normal .e 485 to 912 438 to 9       430/438
(98 %)
13 diff
(97.1 %id)
DB155819 thymus .e 513 to 1104 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
BX495566 Liver .e 557 to 1044 1 to 488       488/489
(99 %)
3 diff
(99.4 %id)
DC400676 testis .e 562 to 1123 1 to 564       564/570
(98 %)
6 diff
(99.0 %id)
H92505 eye, retina .e 625 to 1001 399 to 12     Submitted on the opposite strand 388/430
(90 %)
11 diff
(97.5 %id)
BG332453 large cell carcinoma, lung .e 693 to 1403 1 to 702       702/956
(73 %)
28 diff
(97.1 %id)
BG331565 large cell carcinoma, lung .e 693 to 1240 1 to 549       547/1018
(53 %)
21 diff
(98.0 %id)
DB214071 trachea .e 735 to 1292 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA318907 hippocampus .e 736 to 1392 2 to 659   capped   658/658
(100 %)
1 diff
(99.9 %id)
BM452675 lymph, lymphoma, cell line .e 749 to 1636 1 to 895       895/1031
(86 %)
18 diff
(98.3 %id)
CB159241 Liver .e 777 to 1313 1 to 537       537/537
(100 %)
0 diff
(100 %id)
BM800997 melanotic melanoma, skin .e 823 to 1803 1 to 1001       1001/1026
(97 %)
21 diff
(98.0 %id)
DA218266 brain .e 856 to 1394 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
CN310693 embryonic stem cells, DMSO-treated H9 cellline .e 869 to 1443 1 to 575       575/575
(100 %)
0 diff
(100 %id)
BU430344 lymph .e 894 to 1325 1 to 432       432/432
(100 %)
4 diff
(99.1 %id)
BY997292   .e 895 to 1537 10 to 652       643/652
(98 %)
6 diff
(99.1 %id)
TI_154151730   .e 900 to 1345 79 to 524       446/446
(100 %)
0 diff
(100 %id)
DB469491 hippocampus .e 904 to 1345 1 to 442       442/442
(100 %)
2 diff
(99.6 %id)
CN310692 embryonic stem cells, cell lines H1, H7, andH9 .e 927 to 1307 1 to 381       381/381
(100 %)
1 diff
(99.8 %id)
DB145798 thymus .e 973 to 1509 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
CX787812 human embryonic stem cells .e 1044 to 1855 1 to 812       765/814
(93 %)
82 diff
(90.0 %id)
BE719367 head_neck .e 1048 to 1495 16 to 462       447/462
(96 %)
7 diff
(98.5 %id)
CB154092 Liver .e 1053 to 1649 1 to 597       597/597
(100 %)
0 diff
(100 %id)
BG536108 lung .e 1121 to 1707 1 to 608       568/797
(71 %)
29 diff
(96.4 %id)
BE086194 breast .e 1167 to 1404 34 to 270       237/275
(86 %)
9 diff
(96.8 %id)
DA399500 thalamus .e 1195 to 1728 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DB083521 testis .e 1215 to 1766 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DB227048 trachea .e 1242 to 1822 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB239049 trachea .e 1255 to 1711 2 to 458   capped   457/457
(100 %)
0 diff
(100 %id)
DB212569 trachea .e 1259 to 1818 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
AU185815 skin .e 1298 to 1786 489 to 1       489/489
(100 %)
0 diff
(100 %id)
CX163250 human embryonic stem cells differentiated toan early endodermal cell type .e 1326 to 2147 1 to 823       823/823
(100 %)
11 diff
(98.7 %id)
DA228090 brain .e 1339 to 1905 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
AA243094 brain, neuroepithelial cells .e 1355 to 1733 1 to 379       379/379
(100 %)
1 diff
(99.8 %id)
AA243113 brain, neuroepithelial cells .e 1355 to 1671 1 to 316       316/316
(100 %)
1 diff
(99.7 %id)
DA317588 hippocampus .e 1374 to 1921 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
BU428636 lymph .e 1396 to 1750 8 to 362       355/362
(98 %)
8 diff
(97.8 %id)
BU428998 lymph .e 1396 to 1740 8 to 352       345/352
(98 %)
8 diff
(97.8 %id)
TI_154149469   .e 1396 to 1896 69 to 573       505/670
(75 %)
19 diff
(97.2 %id)
TI_154149899   .e 1396 to 1899 79 to 582       504/506
(99 %)
17 diff
(96.7 %id)
CB135029 Liver .e 1418 to 2033 1 to 616       616/616
(100 %)
0 diff
(100 %id)
DA831334 placenta .e 1474 to 2115 2 to 643   capped   642/642
(100 %)
2 diff
(99.7 %id)
AW402273 lymph .e 1475 to 1942 1 to 468       468/468
(100 %)
5 diff
(99.0 %id)
TI_154138608   .e 1481 to 1990 80 to 589       510/510
(100 %)
1 diff
(99.9 %id)
BX371469 Neuroblastoma Cot 50-normalized .e 1519 to 2468 946 to 1       946/964
(98 %)
19 diff
(98.1 %id)
DA803080 brain .e 1562 to 2122 2 to 564   capped   561/563
(99 %)
2 diff
(99.7 %id)
BG392638 embryonal carcinoma, cell line, testis .e 1618 to 2233 1 to 616       616/616
(100 %)
0 diff
(100 %id)
DA203633 brain .e 1637 to 2218 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA245528 brain .e 1685 to 2266 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DB141673 thymus .e 1696 to 2229 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA406274 thalamus .e 1722 to 2285 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
AL705114 human skeletal muscle .e 1749 to 2359 1 to 611       611/611
(100 %)
0 diff
(100 %id)
AW084968 esophagus, squamous cell carcinoma .e 1771 to 2447 674 to 1       674/839
(80 %)
12 diff
(98.6 %id)
BE968796 heart .e 1778 to 2327 1 to 546       546/845
(64 %)
9 diff
(99.0 %id)
AA373784 lung .e 1780 to 2081 1 to 303       303/313
(96 %)
2 diff
(99.4 %id)
DB143290 thymus .e 1811 to 2341 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
TI_149311105   .e 1812 to 2471 744 to 85   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 660/981
(67 %)
0 diff
(100 %id)
BM977314 lung, Primary Lung Epithelial Cells .e 1812 to 2471 678 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 660/674
(97 %)
0 diff
(100 %id)
CA314168 Human Lung Epithelial cells, lung .e 1812 to 2471 678 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 660/669
(98 %)
0 diff
(100 %id)
CA450610 Human Lung Epithelial cells, lung .e 1812 to 2471 678 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 660/669
(98 %)
0 diff
(100 %id)
CF128765 Chondrosarcoma Lung Metastasis cell lines, lung .e 1876 to 2380 1 to 505       505/505
(100 %)
6 diff
(98.9 %id)
TI_154194932   .e 1876 to 2519 41 to 684       644/985
(65 %)
24 diff
(97.6 %id)
AV755379 bone marrow .e 1926 to 2395 70 to 531       462/533
(86 %)
12 diff
(97.8 %id)
TI_149280831   .e 2009 to 2741 796 to 68   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 729/786
(92 %)
15 diff
(98.1 %id)
DA119555 cerebellum .e 2027 to 2556 2 to 533   capped   532/532
(100 %)
2 diff
(99.7 %id)
AI431845 Kidney .e 2044 to 2447 404 to 1       404/404
(100 %)
1 diff
(99.8 %id)
BM969907 lung, Primary Lung Epithelial Cells .e 2099 to 2741 659 to 17   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 643/643
(100 %)
2 diff
(99.7 %id)
BG897106 cartilage .e 2101 to 2618 85 to 603       519/538
(96 %)
12 diff
(97.8 %id)
BG286613 bladder, transitional cell papilloma, cell line .e 2103 to 2883 1 to 773       773/992
(77 %)
29 diff
(97.1 %id)
AL598614   .e 2133 to 2823 1 to 692       692/693
(99 %)
4 diff
(99.5 %id)
AV645406 corresponding non cancerous liver tissue .e 2137 to 2534 1 to 398     Submitted on the opposite strand 398/398
(100 %)
0 diff
(100 %id)
AV645940 corresponding non cancerous liver tissue .e 2137 to 2476 1 to 340     Submitted on the opposite strand 340/340
(100 %)
0 diff
(100 %id)
BF540955 hypernephroma, Kidney .e 2137 to 2773 1 to 635       635/636
(99 %)
10 diff
(98.5 %id)
N41995 placenta .e 2167 to 2514 1 to 348       348/350
(99 %)
7 diff
(98.0 %id)
AW385520 leiomios .e 2290 to 2672 388 to 10       379/397
(95 %)
0 diff
(100 %id)
BX473190   .e 2317 to 2915 1 to 600       600/600
(100 %)
3 diff
(99.5 %id)
BM153080 leukopheresis .e 2325 to 2790 1 to 466       466/466
(100 %)
3 diff
(99.4 %id)
BM153832 leukopheresis .e 2325 to 2758 1 to 433       433/433
(100 %)
17 diff
(96.1 %id)
AU120628 whole embryo, mainly body .e 2327 to 3224 2 to 913   capped   912/914
(99 %)
25 diff
(97.3 %id)
N87302   .e 2372 to 2709 1 to 331       331/331
(100 %)
15 diff
(95.5 %id)
DA395607 thalamus .e 2397 to 2986 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
AI767234 2 pooled tumors (clear cell type), Kidney .e 2414 to 2677 279 to 17   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 263/263
(100 %)
5 diff
(98.1 %id)
BG505456 embryonal carcinoma, testis .e 2419 to 3191 1 to 771       771/775
(99 %)
11 diff
(98.6 %id)
BQ719470 sympathetic trunk .e 2454 to 3325 1 to 877       877/882
(99 %)
14 diff
(98.5 %id)
DA026754   .e 2470 to 3052 2 to 588   capped   587/593
(98 %)
10 diff
(98.4 %id)
BU963622 mixed (pool of 40 RNAs) .e 2496 to 2969 1 to 474   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 474/474
(100 %)
2 diff
(99.6 %id)
DA884470   .e 2534 to 3076 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
AW838022 leiomios .e 2544 to 3040 1 to 495       495/495
(100 %)
9 diff
(98.2 %id)
BX643793   .e 2567 to 3394 10 to 834       825/840
(98 %)
5 diff
(99.5 %id)
DA180445 amygdala .e 2583 to 3140 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA471801   .e 2611 to 3179 2 to 572   capped   571/571
(100 %)
4 diff
(99.3 %id)
CR603171 Placenta Cot 25-normalized .e 2622 to 4993 1 to 2372   tiling clone,   2372/2372
(100 %)
0 diff
(100 %id)
AL550201 placenta, Placenta Cot 25-normalized .e 2622 to 3693 1 to 1068       1068/1068
(100 %)
7 diff
(99.4 %id)
BG898501 cartilage .e 2660 to 3177 87 to 604       518/545
(95 %)
2 diff
(99.7 %id)
DA883332   .e 2673 to 3248 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
Z28855 leg muscle, skeletal muscle .e 2707 to 2929 1 to 223       223/223
(100 %)
1 diff
(99.6 %id)
BI086669 cervix .e 2709 to 3356 1 to 656       656/656
(100 %)
9 diff
(98.7 %id)
CB270039 adipose .e 2748 to 3322 1 to 573       573/574
(99 %)
3 diff
(99.5 %id)
DA159344 amygdala .e 2762 to 3330 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
T30794 adipose .e 2768 to 3035 1 to 268       268/268
(100 %)
0 diff
(100 %id)
AW952170   .e 2769 to 3224 1 to 456       456/456
(100 %)
1 diff
(99.8 %id)
DA833317 placenta .e 2774 to 3498 2 to 728   capped   727/727
(100 %)
4 diff
(99.5 %id)
FN061480 breast carcinoma .e 2776 to 2870 1 to 93       93/93
(100 %)
4 diff
(95.7 %id)
AI124853 brain, pooled frontal lobe .e 2779 to 3219 1 to 441     Submitted on the opposite strand 441/441
(100 %)
0 diff
(100 %id)
DB478621 hippocampus .e 2785 to 3244 1 to 460       460/460
(100 %)
1 diff
(99.8 %id)
BE788885 large cell carcinoma, lung .e 2808 to 3472 1 to 662       662/906
(73 %)
8 diff
(99.2 %id)
DA180481 amygdala .e 2876 to 3439 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA536972 heart .e 2883 to 3471 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA351819 substantia nigra .e 2897 to 3430 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
FN140228 breast carcinoma .e 2928 to 3049 117 to 1     Submitted on the opposite strand 117/117
(100 %)
5 diff
(95.8 %id)
DA465124   .e 2930 to 3502 2 to 577   capped   576/576
(100 %)
3 diff
(99.5 %id)
BU183681 melanotic melanoma, skin .e 2941 to 3753 1 to 830       830/837
(99 %)
20 diff
(97.7 %id)
BU177377 melanotic melanoma, skin .e 2945 to 3808 1 to 868       868/868
(100 %)
5 diff
(99.5 %id)
BU567031 mixed (pool of 40 RNAs) .e 2950 to 3320 1 to 370       370/370
(100 %)
2 diff
(99.5 %id)
N30273 placenta .e 2958 to 3320 364 to 1       364/364
(100 %)
3 diff
(99.2 %id)
AL529377 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .e 2964 to 3160 382 to 169       961/1162
(82 %)
27 diff
(97.7 %id)
DA831177 placenta .e 2993 to 3732 2 to 740   capped   739/763
(96 %)
9 diff
(98.9 %id)
BQ721849 sympathetic trunk .e 3024 to 3881 12 to 879       868/881
(98 %)
16 diff
(98.2 %id)
DB178360 kidney, tumor tissue .e 3024 to 3576 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
C01890   .e 3028 to 3170 1 to 143       143/145
(98 %)
3 diff
(98.0 %id)
CN310700 embryonic stem cells, cell lines H1, H7, andH9 .e 3037 to 3624 1 to 589       589/589
(100 %)
3 diff
(99.5 %id)
DB259053 uterus .e 3047 to 3629 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
BU161298 melanotic melanoma, skin .e 3059 to 3600 1 to 548       548/1007
(54 %)
9 diff
(99.2 %id)
CB265393 adipose .e 3065 to 3322 1 to 256       256/256
(100 %)
4 diff
(98.5 %id)
CB267266 adipose .e 3067 to 3685 1 to 617       617/619
(99 %)
3 diff
(99.6 %id)
CB266270 adipose .e 3068 to 3612 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
DA672826   .e 3075 to 3681 2 to 609   capped   608/608
(100 %)
1 diff
(99.9 %id)
DA043156 bladder .e 3079 to 3648 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
AA069611   .e 3119 to 3664 565 to 15   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 551/557
(98 %)
7 diff
(98.8 %id)
Z25225 leg muscle, skeletal muscle .e 3157 to 3491 336 to 2       335/336
(99 %)
0 diff
(100 %id)
DA693154   .e 3221 to 3787 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
C03284 heart .e 3289 to 3694 1 to 411       411/415
(99 %)
20 diff
(95.2 %id)
C04775 heart .e 3289 to 3506 1 to 218       218/218
(100 %)
1 diff
(99.6 %id)
BE891475 melanotic melanoma, skin .e 3301 to 3995 1 to 681       681/684
(99 %)
22 diff
(96.8 %id)
BE004640 breast_normal .e 3316 to 3559 244 to 1     Submitted on the opposite strand 244/246
(99 %)
2 diff
(99.2 %id)
BQ215331 large cell carcinoma, lung .e 3326 to 3741 1 to 416       416/894
(46 %)
7 diff
(99.3 %id)
BG434798 placenta .e 3347 to 4022 1 to 676       676/677
(99 %)
9 diff
(98.7 %id)
AW390449 stomach .e 3352 to 3751 28 to 428       401/428
(93 %)
6 diff
(98.6 %id)
AW390452 stomach .e 3353 to 3759 20 to 427       408/427
(95 %)
6 diff
(98.6 %id)
BE928770 lung_normal .e 3421 to 3860 1 to 439       439/447
(98 %)
4 diff
(99.2 %id)
BF844965 head_neck .e 3424 to 3892 30 to 494       465/494
(94 %)
6 diff
(98.8 %id)
DA728016   .e 3439 to 3916 2 to 479   capped   478/478
(100 %)
0 diff
(100 %id)
AA313009 Bone .e 3461 to 3697 1 to 237       237/237
(100 %)
2 diff
(99.2 %id)
BX369967 Placenta Cot 25-normalized .e 3490 to 4243 1 to 754       754/859
(87 %)
13 diff
(98.5 %id)
DB379983 placenta .e 4447 to 5022 575 to 1       575/575
(100 %)
14 diff
(97.6 %id)
DB376706 placenta .e 4506 to 5022 517 to 1       517/580
(89 %)
9 diff
(98.5 %id)
AU146644 whole embryo, mainly body .e 4529 to 5022 496 to 1       496/555
(89 %)
5 diff
(99.1 %id)
DB376963 placenta .e 4578 to 5022 445 to 1       445/445
(100 %)
16 diff
(96.5 %id)
AA232192 brain, neuroepithelial cells .e 4637 to 5022 386 to 1       386/386
(100 %)
0 diff
(100 %id)
DB233549 trachea .f 1 to 586 2 to 587 exact tiling clone, capped   586/586
(100 %)
0 diff
(100 %id)
CB988515 Human Placenta, placenta .g 1 to 701 29 to 733 E146R V149I L152A A157G S158F ... tiling clone,   706/795
(88 %)
15 diff
(98.2 %id)
DB258833 uterus .h 1 to 564 5 to 568 exact tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
DB091758 testis .i 1 to 556 2 to 557 exact tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
DA686815   .j 1 to 463 2 to 467   tiling clone, capped   466/466
(100 %)
3 diff
(99.4 %id)
DB227971 trachea .j 32 to 591 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA113537 cerebellum .j 42 to 587 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DR005821 Prostate .j 51 to 802 8 to 759 F115X tiling clone,   752/759
(99 %)
6 diff
(99.3 %id)
BP230705 brain .j 67 to 632 8 to 575       568/575
(98 %)
5 diff
(99.2 %id)
DA019876   .j 90 to 576 2 to 488   capped   487/487
(100 %)
0 diff
(100 %id)
DA214383 brain .j 123 to 665 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA649764   .j 133 to 690 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
AK223306 thymus .k-u 1 to 1459 2 to 1460 P94S tiling clone, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 1460/1460
(100 %)
2 diff
(99.9 %id)
AK314923 subthalamic nucleus .k-u 1 to 576 2 to 577 exact tiling clone,   577/577
(100 %)
0 diff
(100 %id)
DQ192294   .k-u 1 to 453 2 to 454       454/454
(100 %)
0 diff
(100 %id)
BP367195 thymus .k-u 1 to 580 2 to 581 P94S     581/581
(100 %)
1 diff
(99.9 %id)
DA365588 subthalamic nucleus .k-u 1 to 380 2 to 381   capped   380/380
(100 %)
0 diff
(100 %id)
AJ012743   .k-u 4 to 1466 1 to 1461 exact     1461/1461
(100 %)
7 diff
(99.6 %id)
BI752621 brain .k-u 4 to 489 1 to 485       485/485
(100 %)
1 diff
(99.8 %id)
TI_57219664   .k-u 4 to 652 45 to 691 exact     647/691
(93 %)
6 diff
(99.2 %id)
NM_012282.2   .k-u 4 to 1468 1 to 1465 exact RefSeq,   1465/1465
(100 %)
0 diff
(100 %id)
BC035330 Brain, adult, 6 pooled whole brains .k-u 25 to 1459 1 to 1435 exact available from MGC, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 1435/1435
(100 %)
1 diff
(100.0 %id)
BI754381 brain .k-u 25 to 489 1 to 464       464/464
(100 %)
1 diff
(99.8 %id)
TI_57218493   .k-u 25 to 780 31 to 785 E122*     755/785
(96 %)
6 diff
(99.3 %id)
CX788275 human embryonic stem cells .k-u 40 to 716 25 to 701 exact     677/701
(96 %)
6 diff
(99.2 %id)
EF535525 heart .k-u 93 to 686 1 to 594 exact     594/594
(100 %)
0 diff
(100 %id)
EL733644 mixed .k-u 148 to 575 1 to 428       428/597
(71 %)
1 diff
(99.9 %id)
BX282740 brain, glioblastoma (pooled) .k-u 292 to 778 1 to 487       487/487
(100 %)
0 diff
(100 %id)
TI_1948239044   .k-u 348 to 575 837 to 607     Submitted on the opposite strand 231/1234
(18 %)
0 diff
(100 %id)
TI_1948239327   .k-u 348 to 575 834 to 604     Submitted on the opposite strand 231/1186
(19 %)
0 diff
(100 %id)
BI054456 placenta_normal .k-u 691 to 846 156 to 1       156/156
(100 %)
1 diff
(99.4 %id)
AA195817 muscle, skeletal muscle .k-u 736 to 1223 1 to 485       485/485
(100 %)
4 diff
(99.2 %id)
AL546854 placenta, Placenta Cot 25-normalized .k-u 794 to 1622 818 to 1   tiling clone,   818/885
(92 %)
22 diff
(97.6 %id)
AI094604 brain, glioblastoma (pooled) .k-u 958 to 1468 511 to 2       510/511
(99 %)
0 diff
(100 %id)
BF112017 pooled .k-u 999 to 1463 481 to 17   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 465/465
(100 %)
1 diff
(99.8 %id)
AI380172 brain, glioblastoma (pooled) .k-u 1009 to 1459 451 to 1       451/451
(100 %)
0 diff
(100 %id)
BE856206 brain, glioblastoma (pooled) .k-u 1018 to 1461 448 to 3       446/448
(99 %)
0 diff
(100 %id)
AA047636 heart .k-u 1064 to 1460 1 to 397   fully sequenced,   397/397
(100 %)
2 diff
(99.5 %id)
AI349409 lung .k-u 1067 to 1466 400 to 1       400/400
(100 %)
1 diff
(99.8 %id)
AA977440 Kidney, kidney tumor .k-u 1084 to 1466 383 to 1       383/383
(100 %)
1 diff
(99.8 %id)
AI051276 brain, glioblastoma (pooled) .k-u 1137 to 1468 333 to 2       332/333
(99 %)
0 diff
(100 %id)
W93957 heart .k-u 1151 to 1466 1 to 318       318/318
(100 %)
4 diff
(98.8 %id)
AF086499   .k-u 1152 to 1466 1 to 315   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 315/315
(100 %)
1 diff
(99.7 %id)
W94014 heart .k-u 1158 to 1467 311 to 1       311/311
(100 %)
2 diff
(99.4 %id)
AI086317 liver and spleen .k-u 1186 to 1459 273 to 1       273/273
(100 %)
3 diff
(99.0 %id)
D20824   .k-u 1204 to 1468 1 to 265     Submitted on the opposite strand 265/266
(99 %)
1 diff
(99.7 %id)
AA047536 heart .k-u 1282 to 1466 186 to 1   fully sequenced,   186/186
(100 %)
0 diff
(100 %id)
AA195994 muscle, skeletal muscle .k-u 1345 to 1465 121 to 1       121/121
(100 %)
0 diff
(100 %id)
DA757651   .l 1 to 564 2 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DA567600   .l 60 to 610 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB282182 uterus .l 92 to 636 2 to 546 exact tiling clone, capped   545/545
(100 %)
1 diff
(99.9 %id)
CB960391 Human Placenta, placenta .m-u 1 to 696 28 to 724   tiling clone,   697/742
(93 %)
4 diff
(99.5 %id)
DA378616 thalamus .m-u 35 to 612 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA249521 brain .n 1 to 578 7 to 584 exact tiling clone, capped   583/583
(100 %)
0 diff
(100 %id)
DA694769   .n 49 to 620 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
BX954100   .o 1 to 679 6 to 684 exact tiling clone,   684/684
(100 %)
2 diff
(99.8 %id)
CN268779 embryonic stem cells, cell lines H1, H7, andH9 .p-u 1 to 713 1 to 712   tiling clone,   712/712
(100 %)
2 diff
(99.8 %id)
H63852 liver and spleen .p-u 466 to 821 1 to 360   tiling clone,   360/432
(83 %)
6 diff
(98.7 %id)
H63853 liver and spleen .p-u 843 to 1041 210 to 8   tiling clone,   203/210
(96 %)
0 diff
(100 %id)
AK054631   .p-u 919 to 3151 1 to 2233 exact tiling clone, available from FLJ,   2233/2233
(100 %)
1 diff
(100.0 %id)
DA018800   .p-u 920 to 1519 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
DA673826   .p-u 1000 to 1483 2 to 485   capped   484/484
(100 %)
2 diff
(99.6 %id)
AW381452 head_neck .p-u 2537 to 2963 7 to 429   tiling clone,   423/451
(93 %)
9 diff
(98.1 %id)
AA702118 liver and spleen .p-u 2572 to 2984 413 to 1       413/413
(100 %)
1 diff
(99.8 %id)
W95006 liver and spleen .p-u 2597 to 3148 1 to 563   fully sequenced,   563/563
(100 %)
13 diff
(97.7 %id)
DB295478   .p-u 2632 to 3151 521 to 1       521/521
(100 %)
1 diff
(99.9 %id)
W95007 liver and spleen .p-u 2999 to 3151 153 to 1   fully sequenced,   153/153
(100 %)
0 diff
(100 %id)
W90270 liver and spleen .q 1 to 462 1 to 460 A5X S6P S7V L8* tiling clone,   460/462
(99 %)
3 diff
(99.4 %id)
W90595 liver and spleen .q 551 to 1006 461 to 1   tiling clone,   461/471
(97 %)
7 diff
(98.6 %id)
BE048380 Kidney .r-u 1 to 447 454 to 8 exact tiling clone,   447/454
(98 %)
0 diff
(100 %id)
BE048423 Kidney .r-u 121 to 447 337 to 11   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 327/327
(100 %)
2 diff
(99.4 %id)
AA381287   .r-u 123 to 301 1 to 179       179/179
(100 %)
6 diff
(96.7 %id)
BX374924 Neuroblastoma Cot 25-normalized Gene ACSL4andKCNE1L, variant not shown         This clone was ignored    
AV687368 hepatocellular carcinoma Gene ACSL4andKCNE1L, variant not shown       AAA      
AV699595 hepatocellular carcinoma Gene ACSL4andKCNE1L, variant not shown              
AV704470 adrenal gland Gene ACSL4andKCNE1L, variant not shown         Suspected internal deletion, this clone was ignored    
BP228786 brain Gene ACSL4andKCNE1L, variant not shown              
BP229324 brain Gene ACSL4andKCNE1L, variant not shown              
BP201997 amygdala Gene ACSL4andKCNE1L, variant not shown              
BP202616 amygdala Gene ACSL4andKCNE1L, variant not shown              
BP290879 lung Gene ACSL4andKCNE1L, variant not shown         Suspected internal deletion, this clone was ignored    
BP251099 hippocampus Gene ACSL4andKCNE1L, variant not shown              
BM677846 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene ACSL4andKCNE1L, variant not shown       fully sequenced, AAA Suspected internal deletion, this clone was ignored    
BM725420 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene ACSL4andKCNE1L, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
AV755937 bone marrow Gene ACSL4andKCNE1L, variant not shown         Suspected internal deletion, this clone was ignored    
DA523106 brain Gene ACSL4andKCNE1L, variant not shown       capped      
DA405910 thalamus Gene ACSL4andKCNE1L, variant not shown       capped      
AV721899 hypothalamus Gene ACSL4andKCNE1L, variant not shown         Suspected internal deletion, this clone was ignored    
CB267401 adipose Gene ACSL4andKCNE1L, variant not shown              
FN053527 breast carcinoma Gene ACSL4andKCNE1L, variant not shown              
CN310703 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells Gene ACSL4andKCNE1L, variant not shown         This clone was ignored    
BP219819 caudate nucleus Gene ACSL4andKCNE1L, variant not shown              
DA188155 amygdala Gene ACSL4andKCNE1L, variant not shown       capped      
DA188176 amygdala Gene ACSL4andKCNE1L, variant not shown       capped      
DA352233 substantia nigra Gene ACSL4andKCNE1L, variant not shown       capped      
AK294915 brain Gene ACSL4andKCNE1L, variant not shown         Suspected internal deletion, this clone was ignored    
DA092504 cerebellum Gene ACSL4andKCNE1L, variant not shown       capped      
DB298612 cerebellum Gene ACSL4andKCNE1L, variant not shown              
DA094975 cerebellum Gene ACSL4andKCNE1L, variant not shown       capped      
DA173766 amygdala Gene ACSL4andKCNE1L, variant not shown       capped      
DA176148 amygdala Gene ACSL4andKCNE1L, variant not shown       capped      
DA228246 brain Gene ACSL4andKCNE1L, variant not shown       capped      
DC322774 brain Gene ACSL4andKCNE1L, variant not shown              
DA240902 brain Gene ACSL4andKCNE1L, variant not shown       capped      
DA318139 hippocampus Gene ACSL4andKCNE1L, variant not shown       capped      
DA324908 hippocampus Gene ACSL4andKCNE1L, variant not shown       capped      
DA337945 hippocampus Gene ACSL4andKCNE1L, variant not shown       capped      
DA488185 brain Gene ACSL4andKCNE1L, variant not shown       capped      
H67886 liver and spleen Gene ACSL4andKCNE1L, variant not shown         This clone was ignored    
H67930 liver and spleen Gene ACSL4andKCNE1L, variant not shown         This clone was ignored    
AI285492 lymph node, mantle cell lymphoma Gene ACSL4andKCNE1L, variant not shown              
BI545768 brain, hippocampus Gene ACSL4andKCNE1L, variant not shown              
TI_44165776   Gene ACSL4andKCNE1L, variant not shown              
DA799741 brain Gene ACSL4andKCNE1L, variant not shown       capped      
DA804151 brain Gene ACSL4andKCNE1L, variant not shown       capped      
DB212858 trachea Gene ACSL4andKCNE1L, variant not shown       capped This clone was ignored    
DB348858 trachea Gene ACSL4andKCNE1L, variant not shown         This clone was ignored    
DB236019 trachea Gene ACSL4andKCNE1L, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l, .m-u, .n, .o, .p-u, .q, .r-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC