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Gene ABI3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
88 supporting clones for gene ABI3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AB037886 placenta .a 1 to 2108 1 to 2108 F311S tiling clone, AAA   2108/2108
(100 %)
1 diff
(100.0 %id)
NM_016428.2   .a 1 to 2109 1 to 2109 F311S RefSeq, AAA   2109/2109
(100 %)
1 diff
(100.0 %id)
TI_57152182   .a 184 to 940 26 to 778       753/783
(96 %)
15 diff
(98.1 %id)
BI763536 pooled colon, kidney, stomach .a 191 to 940 1 to 745       745/750
(99 %)
12 diff
(98.4 %id)
AL136709 Kidney .a 204 to 1898 5 to 1699   available from DKFZ, AAA   1695/1695
(100 %)
4 diff
(99.8 %id)
CB989941 Human Placenta, placenta .a 297 to 939 23 to 665       643/745
(86 %)
7 diff
(99.1 %id)
BI824822 pooled brain, lung, testis .a 324 to 1094 1 to 769       769/769
(100 %)
10 diff
(98.7 %id)
TI_57196918   .a 324 to 1094 67 to 835       769/835
(92 %)
18 diff
(97.9 %id)
TI_57234940   .a 333 to 1019 13 to 698       686/698
(98 %)
8 diff
(98.9 %id)
BI908631 leukocyte .a 350 to 1019 1 to 670       670/670
(100 %)
1 diff
(99.9 %id)
BI833256 pooled pancreas and spleen .a 356 to 1093 1 to 740       740/740
(100 %)
3 diff
(99.6 %id)
BQ109414 pooled pancreas and spleen .a 356 to 1047 1 to 693       693/693
(100 %)
3 diff
(99.6 %id)
TI_57165789   .a 356 to 1093 30 to 769       740/769
(96 %)
8 diff
(99.0 %id)
TI_57232162   .a 445 to 1227 28 to 807       780/807
(96 %)
11 diff
(98.7 %id)
BI906278 leukocyte .a 450 to 1227 1 to 775       775/775
(100 %)
5 diff
(99.4 %id)
BX361839   .a 463 to 1143 1 to 684       684/764
(89 %)
12 diff
(98.5 %id)
DR006525 Spleen .a 472 to 1096 1 to 624       624/624
(100 %)
7 diff
(98.9 %id)
BM545138 ovary (pool of 3) .a 488 to 1142 21 to 675       655/1251
(52 %)
8 diff
(99.4 %id)
BM918896 pooled pancreas and spleen .a 492 to 1142 15 to 666       652/1105
(59 %)
13 diff
(98.9 %id)
TI_57182168   .a 492 to 1272 34 to 819       786/819
(95 %)
22 diff
(97.4 %id)
TI_57234063   .a 492 to 1182 26 to 711       686/711
(96 %)
9 diff
(98.8 %id)
BG397698 B-cells, primary B-cells from tonsils (cell line) .a 493 to 1168 1 to 678       678/678
(100 %)
5 diff
(99.3 %id)
CR608488 B cells (Ramos cell line) Cot 25-normalized .a 494 to 2058 1 to 1565   tiling clone,   1565/1565
(100 %)
0 diff
(100 %id)
AL561249 B cells from Burkitt lymphoma .a 494 to 1236 1 to 740   fully sequenced,   740/740
(100 %)
5 diff
(99.4 %id)
BF664148 B-cells, primary B-cells from tonsils (cell line) .a 494 to 1216 1 to 714       713/746
(95 %)
21 diff
(97.2 %id)
BG398401 B-cells, primary B-cells from tonsils (cell line) .a 494 to 1131 1 to 636       636/636
(100 %)
6 diff
(99.1 %id)
BG756024 B-cells, primary B-cells from tonsils (cell line) .a 494 to 1268 1 to 772       772/774
(99 %)
11 diff
(98.6 %id)
BQ052461 blood, natural killer cells, cell line .a 494 to 1137 24 to 759       736/1142
(64 %)
25 diff
(97.9 %id)
BC007780 Primary B-Cells from Tonsils .a 495 to 2109 1 to 1615   available from MGC, AAA   1615/1615
(100 %)
1 diff
(100.0 %id)
TI_57237629   .a 495 to 1170 27 to 703       677/703
(96 %)
10 diff
(98.6 %id)
BI771802 pooled lung and spleen .a 496 to 1272 1 to 782       782/782
(100 %)
16 diff
(98.0 %id)
BI907503 leukocyte .a 496 to 1182 1 to 682       682/682
(100 %)
3 diff
(99.6 %id)
BI839121 pooled pancreas and spleen .a 498 to 1240 25 to 764       740/764
(96 %)
19 diff
(97.6 %id)
TI_57233244   .a 498 to 1169 29 to 701       673/701
(96 %)
8 diff
(98.9 %id)
TI_57167962   .a 498 to 1240 25 to 764       740/764
(96 %)
19 diff
(97.6 %id)
CV026894 mixed .a 499 to 1117 1 to 619       619/619
(100 %)
2 diff
(99.7 %id)
TI_1948123333   .a 499 to 1077 131 to 708   fully sequenced,   578/708
(81 %)
7 diff
(99.1 %id)
TI_1948123509   .a 499 to 1018 132 to 651   fully sequenced,   520/651
(79 %)
6 diff
(99.1 %id)
TI_1948123683   .a 499 to 991 126 to 617   fully sequenced,   492/617
(79 %)
12 diff
(98.1 %id)
TI_1948123845   .a 499 to 1018 128 to 647   fully sequenced,   520/647
(80 %)
6 diff
(99.1 %id)
BI910715 leukocyte .a 500 to 1170 1 to 672       672/672
(100 %)
4 diff
(99.5 %id)
BG389612 embryonal carcinoma, cell line, testis .a 501 to 1158 1 to 658       658/658
(100 %)
3 diff
(99.6 %id)
BI906791 leukocyte .a 501 to 1169 1 to 670       670/670
(100 %)
2 diff
(99.8 %id)
BI521141 pooled pancreas and spleen .a 501 to 1236 1 to 741       741/810
(91 %)
12 diff
(98.6 %id)
BQ052891 blood, natural killer cells, cell line .a 501 to 1050 33 to 679       647/1244
(52 %)
38 diff
(97.0 %id)
BM561661 blood, natural killer cells, cell line .a 504 to 1142 1 to 731       731/994
(73 %)
20 diff
(98.0 %id)
BP424004 small intestine .a 520 to 816 1 to 297     Submitted on the opposite strand 297/297
(100 %)
3 diff
(99.0 %id)
BM563994 blood, natural killer cells, cell line .a 604 to 1277 1 to 688       688/1252
(54 %)
17 diff
(98.7 %id)
BG341365 B-cells, primary B-cells from tonsils (cell line) .a 607 to 1317 2 to 706       705/1095
(64 %)
35 diff
(96.9 %id)
BQ052876 blood, natural killer cells, cell line .a 613 to 1119 129 to 737       609/1211
(50 %)
51 diff
(95.8 %id)
TI_1948123684   .a 955 to 1598 767 to 124   fully sequenced,   644/767
(83 %)
6 diff
(99.3 %id)
TI_1948123510   .a 988 to 1598 737 to 127   fully sequenced,   611/737
(82 %)
1 diff
(99.9 %id)
TI_1948123846   .a 988 to 1598 737 to 127   fully sequenced,   611/737
(82 %)
2 diff
(99.8 %id)
TI_1948123334   .a 1016 to 1598 710 to 128   fully sequenced,   583/710
(82 %)
1 diff
(99.9 %id)
AL582530 B cells from Burkitt lymphoma .a 1206 to 2050 854 to 9   fully sequenced,   846/854
(99 %)
6 diff
(99.3 %id)
NM_001135186.1   .b 1 to 2091 1 to 2091 F305S RefSeq, AAA   2091/2091
(100 %)
1 diff
(100.0 %id)
BX385956 Placenta Cot 25-normalized .b 184 to 1083 1 to 896   fully sequenced,   896/896
(100 %)
11 diff
(98.8 %id)
CR621565 Placenta Cot 25-normalized .b 185 to 1902 1 to 1718 exact tiling clone,   1718/1718
(100 %)
0 diff
(100 %id)
DB470855.
matches multiple genes
hippocampus .b 238 to 694 1 to 454     also hits gene norwee 454/454
(100 %)
19 diff
(95.9 %id)
TI_57162491   .b 491 to 1359 28 to 899       872/902
(96 %)
32 diff
(96.5 %id)
TI_57182190   .b 492 to 1250 27 to 785       759/786
(96 %)
11 diff
(98.7 %id)
BI768790 pooled lung and spleen .b 494 to 1195 1 to 702       702/702
(100 %)
1 diff
(99.9 %id)
BI835429 pooled pancreas and spleen .b 494 to 1276 1 to 782       782/833
(93 %)
10 diff
(98.8 %id)
TI_57181932   .b 494 to 1195 35 to 736       702/736
(95 %)
7 diff
(99.1 %id)
TI_57166089   .b 494 to 1276 36 to 817       782/868
(90 %)
16 diff
(98.2 %id)
BI832824 pooled pancreas and spleen .b 496 to 1359 1 to 867       867/870
(99 %)
24 diff
(97.3 %id)
BI772446 pooled lung and spleen .b 497 to 1250 1 to 754       754/755
(99 %)
5 diff
(99.4 %id)
BX385955 Placenta Cot 25-normalized .b 1053 to 1897 848 to 5   fully sequenced,   844/848
(99 %)
6 diff
(99.3 %id)
BX090863 carcinoid, lung .b 1357 to 1825 10 to 478       469/478
(98 %)
6 diff
(98.8 %id)
AI301619 carcinoid, lung .b 1378 to 1879 502 to 1       502/502
(100 %)
0 diff
(100 %id)
BI521451 pooled pancreas and spleen .c 1 to 676 1 to 674   tiling clone,   674/675
(99 %)
4 diff
(99.5 %id)
BG744250 blood, natural killer cells, cell line .c 9 to 680 1 to 672   tiling clone, fully sequenced,   672/672
(100 %)
1 diff
(99.9 %id)
BG744982 blood, natural killer cells, cell line .c 619 to 1419 800 to 3   tiling clone, fully sequenced,   798/800
(99 %)
4 diff
(99.5 %id)
BI522264 pooled pancreas and spleen .c 856 to 1561 731 to 5   tiling clone,   727/900
(80 %)
12 diff
(98.7 %id)
AA622957 lung, lung tumor .c 966 to 1431 466 to 1       466/466
(100 %)
1 diff
(99.8 %id)
TI_154130603   .c 1060 to 1637 687 to 111       577/980
(58 %)
0 diff
(100 %id)
F22175 pectoral muscle (after mastectomy) .c 1075 to 1293 1 to 220       220/220
(100 %)
1 diff
(99.6 %id)
AV706235 adrenal gland .c 1076 to 1637 126 to 682       557/693
(80 %)
26 diff
(96.3 %id)
AW581245 leiomios .c 1111 to 1502 9 to 403       395/426
(92 %)
18 diff
(95.8 %id)
BI008233 kidney_tumor .c 1149 to 1553 1 to 404       404/404
(100 %)
9 diff
(97.8 %id)
BG003698 placenta_normal .c 1156 to 1481 1 to 326       326/340
(95 %)
9 diff
(97.4 %id)
BG005838 placenta_normal .c 1157 to 1475 1 to 322       322/322
(100 %)
6 diff
(98.2 %id)
AW136767   .c 1237 to 1637 418 to 18   tiling clone, AAA   401/401
(100 %)
0 diff
(100 %id)
AA808681 germinal center B cell .c 1249 to 1637 413 to 24   AAA   390/390
(100 %)
1 diff
(99.8 %id)
AI969162 brain, four pooled pituitary adenomas .c 1257 to 1638 382 to 1   tiling clone,   382/382
(100 %)
1 diff
(99.8 %id)
BI834012 pooled pancreas and spleen .c 1259 to 1637 1 to 379   AAA   379/379
(100 %)
1 diff
(99.8 %id)
TI_57164336   .c 1259 to 1637 35 to 413   AAA   379/413
(91 %)
6 diff
(98.6 %id)
AW204075   .c 1282 to 1636 372 to 18   AAA   355/355
(100 %)
0 diff
(100 %id)
AW001631 Kidney .c 1287 to 1637 352 to 1       352/352
(100 %)
4 diff
(98.9 %id)
AA909959 pooled .c 1299 to 1636 342 to 5       338/342
(98 %)
0 diff
(100 %id)
AW139398   .c 1322 to 1637 332 to 18   AAA   315/316
(99 %)
8 diff
(97.5 %id)
AA906400 pooled .c 1358 to 1636 283 to 5       279/283
(98 %)
0 diff
(100 %id)
BF437660 Prostate .c 1363 to 1464 102 to 1       102/102
(100 %)
0 diff
(100 %id)
AA721188 germinal center B cell .c 1450 to 1582 133 to 1       133/133
(100 %)
0 diff
(100 %id)
BM549913 leukocyte .d 1 to 754 23 to 779 R9I A10H S11Q R12G L14C ... tiling clone,   757/1119
(67 %)
20 diff
(98.3 %id)
BQ053220 blood, natural killer cells, cell line Gene ABI3, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI