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Gene ABCC2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
96 supporting clones for gene ABCC2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CB120555 Liver .a 1 to 395 1 to 395   tiling clone,   395/395
(100 %)
7 diff
(98.3 %id)
NM_000392.3   .a 1 to 5051 1 to 5051 Y39F RefSeq,   5051/5051
(100 %)
1 diff
(100.0 %id)
AA004986 liver and spleen .a 27 to 410 8 to 393       386/393
(98 %)
20 diff
(95.0 %id)
U49248 liver and spleen .a 39 to 5338 1 to 5300 Y39F V1188E C1515Y tiling clone,   5300/5300
(100 %)
7 diff
(99.9 %id)
R02250 liver and spleen .a 42 to 287 1 to 246       246/246
(100 %)
7 diff
(97.2 %id)
T68342 Liver .a 58 to 329 1 to 279   fully sequenced,   279/279
(100 %)
10 diff
(96.5 %id)
X96395   .a 103 to 4954 1 to 4852 Y39F AAA   4852/4852
(100 %)
1 diff
(100.0 %id)
BC136419 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 105 to 4804 1 to 4700 Y39F     4700/4700
(100 %)
7 diff
(99.9 %id)
U63970   .a 111 to 4970 9 to 4868 Y39F tiling clone,   4860/4868
(99 %)
7 diff
(99.9 %id)
CD608375   .a 189 to 685 1 to 498       498/498
(100 %)
3 diff
(99.4 %id)
T68279 Liver .a 299 to 710 418 to 1   fully sequenced,   418/418
(100 %)
10 diff
(97.7 %id)
T95460 liver and spleen .a 401 to 838 1 to 445       445/445
(100 %)
16 diff
(96.5 %id)
T61818 Liver .a 456 to 707 253 to 5       249/253
(98 %)
3 diff
(98.9 %id)
AI566147 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 491 to 1007 524 to 9       516/524
(98 %)
1 diff
(99.9 %id)
AI249051 liver and spleen .a 601 to 1022 422 to 1       422/436
(96 %)
4 diff
(99.1 %id)
AA004813 liver and spleen .a 606 to 1007 411 to 10       402/413
(97 %)
3 diff
(99.3 %id)
R02136 liver and spleen .a 650 to 1003 355 to 1       355/358
(99 %)
3 diff
(99.2 %id)
T95677 liver and spleen .a 689 to 1004 321 to 1       321/366
(87 %)
8 diff
(97.9 %id)
CD608372   .a 1045 to 1441 29 to 432       404/432
(93 %)
17 diff
(96.1 %id)
CD608363   .a 1067 to 1637 28 to 599       572/603
(94 %)
15 diff
(97.6 %id)
CD608365   .a 1067 to 1476 29 to 440       412/440
(93 %)
8 diff
(98.2 %id)
CD608367   .a 1067 to 1636 28 to 596       569/596
(95 %)
9 diff
(98.5 %id)
CD608369   .a 1067 to 1584 27 to 544       518/544
(95 %)
13 diff
(97.7 %id)
CD608371   .a 1492 to 2100 605 to 1       605/605
(100 %)
8 diff
(98.7 %id)
CD608374   .a 1492 to 2093 611 to 8       604/611
(98 %)
12 diff
(98.1 %id)
CD608368   .a 1534 to 2100 568 to 1       568/568
(100 %)
8 diff
(98.6 %id)
CD608366   .a 1546 to 2100 557 to 1       557/557
(100 %)
3 diff
(99.5 %id)
CD608370   .a 1593 to 2100 508 to 1       508/508
(100 %)
2 diff
(99.7 %id)
CD608364   .a 1672 to 2100 432 to 1       432/437
(98 %)
6 diff
(98.7 %id)
CD608376   .a 1773 to 2100 335 to 8       328/335
(97 %)
0 diff
(100 %id)
BX496010 Liver .a 2765 to 3348 1 to 590       590/590
(100 %)
8 diff
(98.7 %id)
BF094599 uterus_tumor .a 3286 to 3808 17 to 538       522/538
(97 %)
7 diff
(98.7 %id)
BJ997102 hepatoblastoma .a 3352 to 3802 1 to 451       451/451
(100 %)
0 diff
(100 %id)
BQ220800 large cell carcinoma, lung .a 3582 to 4342 1 to 768       768/887
(86 %)
14 diff
(98.5 %id)
BJ993734 hepatoblastoma .a 3722 to 4282 1 to 561       561/561
(100 %)
0 diff
(100 %id)
BG205053   .a 3877 to 4677 1 to 800       800/800
(100 %)
16 diff
(98.0 %id)
DA374583 thalamus .a 3884 to 4430 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
BM804774 ovary (pool of 3) .a 3928 to 4906 23 to 1006       984/1006
(97 %)
32 diff
(96.9 %id)
R91502 liver and spleen .a 4001 to 4368 1 to 377       377/417
(90 %)
14 diff
(96.7 %id)
AV652973 corresponding non cancerous liver tissue .a 4085 to 4492 1 to 408     Submitted on the opposite strand 408/408
(100 %)
1 diff
(99.8 %id)
R96617 liver and spleen .a 4121 to 4441 1 to 321       321/330
(97 %)
4 diff
(98.8 %id)
H47977 liver and spleen .a 4124 to 4457 1 to 335       335/396
(84 %)
7 diff
(98.3 %id)
CV372584 lung_tumor .a 4155 to 4617 495 to 33     Submitted on the opposite strand 463/495
(93 %)
1 diff
(99.8 %id)
CV372585 lung_tumor .a 4155 to 4606 491 to 40     Submitted on the opposite strand 452/491
(92 %)
0 diff
(100 %id)
W89004 liver and spleen .a 4185 to 4718 1 to 533       533/533
(100 %)
9 diff
(98.4 %id)
BF541214 hypernephroma, Kidney .a 4270 to 4971 1 to 697       697/701
(99 %)
20 diff
(97.2 %id)
DB522794 testis .a 4275 to 4952 9 to 686     Submitted on the opposite strand 676/688
(98 %)
12 diff
(98.3 %id)
BU634041 cell lines, Chondrosarcoma .a 4313 to 4956 662 to 19   AAA   644/644
(100 %)
3 diff
(99.6 %id)
BM741963 stomach .a 4330 to 4958 1 to 628       628/628
(100 %)
1 diff
(99.9 %id)
BM745734 stomach .a 4330 to 4657 1 to 328       328/328
(100 %)
5 diff
(98.5 %id)
BM745785 stomach .a 4330 to 4727 1 to 402       402/402
(100 %)
6 diff
(98.6 %id)
BM765259 stomach .a 4330 to 5051 1 to 722       722/722
(100 %)
0 diff
(100 %id)
AA188601   .a 4428 to 4911 1 to 483       483/483
(100 %)
7 diff
(98.6 %id)
AA677204 liver and spleen .a 4440 to 4857 419 to 1       419/419
(100 %)
6 diff
(98.6 %id)
AA345776 gall bladder .a 4451 to 4881 9 to 439       431/439
(98 %)
10 diff
(97.8 %id)
AV685221 hepatocellular carcinoma .a 4458 to 4849 1 to 390       390/392
(99 %)
13 diff
(96.7 %id)
AA994962 Kidney .a 4466 to 4962 501 to 5       497/501
(99 %)
3 diff
(99.5 %id)
DB528170 testis .a 4472 to 4952 1 to 481     Submitted on the opposite strand 481/483
(99 %)
2 diff
(99.6 %id)
AA700073 liver and spleen .a 4499 to 4954 458 to 1       458/458
(100 %)
12 diff
(97.4 %id)
AI272739 adenocarcinoma, colon .a 4505 to 4962 462 to 6       457/462
(98 %)
2 diff
(99.6 %id)
DB517293 testis .a 4513 to 4952 1 to 440     Submitted on the opposite strand 440/442
(99 %)
2 diff
(99.6 %id)
DB525377 testis .a 4519 to 4952 1 to 434     Submitted on the opposite strand 434/436
(99 %)
2 diff
(99.6 %id)
AA706096 liver and spleen .a 4541 to 4954 414 to 1       414/414
(100 %)
2 diff
(99.6 %id)
AA676255 liver and spleen .a 4547 to 4954 408 to 1       408/408
(100 %)
9 diff
(97.8 %id)
R05389.
matches multiple genes
liver and spleen .a 4548 to 4808 1 to 262     also hits gene ATG4D 262/266
(98 %)
11 diff
(95.9 %id)
R05391 liver and spleen .a 4548 to 4850 1 to 316       316/339
(93 %)
26 diff
(92.4 %id)
R91503 liver and spleen .a 4578 to 4941 375 to 1       375/386
(97 %)
9 diff
(97.7 %id)
AW965207   .a 4964 to 5717 754 to 1     Submitted on the opposite strand 754/754
(100 %)
5 diff
(99.4 %id)
W89005 liver and spleen .a 5060 to 5340 293 to 6       288/293
(98 %)
0 diff
(100 %id)
CA429833 Cell Line, Chondrosarcoma .a 5076 to 5718 661 to 19   tiling clone, AAA   643/643
(100 %)
2 diff
(99.7 %id)
AI823554 Kidney .a 5111 to 5719 609 to 1       609/609
(100 %)
5 diff
(99.2 %id)
BX643341   .a 5189 to 5696 1 to 508       508/508
(100 %)
0 diff
(100 %id)
BJ993735 hepatoblastoma .a 5192 to 5580 392 to 1       392/392
(100 %)
3 diff
(99.3 %id)
AI795946 Kidney .a 5223 to 5718 523 to 28   AAA   496/496
(100 %)
4 diff
(99.2 %id)
R96618 liver and spleen .a 5240 to 5612 386 to 7       380/387
(98 %)
0 diff
(100 %id)
AI522182 Kidney .a 5273 to 5616 345 to 2       344/345
(99 %)
0 diff
(100 %id)
AA931070 Kidney .a 5322 to 5722 401 to 1   tiling clone,   401/401
(100 %)
1 diff
(99.8 %id)
AA187829   .a 5348 to 5702 357 to 1       357/357
(100 %)
2 diff
(99.5 %id)
AA989403 2 pooled tumors (clear cell type), Kidney .a 5386 to 5718 349 to 17   AAA   333/333
(100 %)
1 diff
(99.7 %id)
H47978 liver and spleen .a 5395 to 5613 219 to 1       219/229
(95 %)
0 diff
(100 %id)
AA699522 liver and spleen .a 5405 to 5718 314 to 1       314/314
(100 %)
0 diff
(100 %id)
BF589901 Kidney .a 5482 to 5720 239 to 1       239/239
(100 %)
0 diff
(100 %id)
U66683   .b 1 to 1714 1 to 1737 D17G S18Q P19S E20G Y39F ... tiling clone,   1737/1737
(100 %)
30 diff
(98.3 %id)
T87741 lung .b 783 to 1249 1 to 473   tiling clone, Submitted on the opposite strand 473/473
(100 %)
19 diff
(96.0 %id)
T87740 lung .b 1546 to 1714 168 to 1   tiling clone, Submitted on the opposite strand 168/168
(100 %)
1 diff
(99.5 %id)
CD518414 White Matter .c 1 to 837 1 to 842 Q219S T221N Q223P A227R H228P ... tiling clone,   842/854
(98 %)
16 diff
(98.2 %id)
CB155960 Liver .d 1 to 722 1 to 722 Y39F tiling clone,   722/722
(100 %)
2 diff
(99.8 %id)
BX495933 Liver .d 6 to 721 1 to 716 Y39F F181X tiling clone,   716/716
(100 %)
3 diff
(99.6 %id)
DB451795 testis .e 1 to 492 1 to 492       492/494
(99 %)
6 diff
(98.8 %id)
DB636388 testis .e 1 to 706 1 to 706 exact tiling clone,   706/706
(100 %)
3 diff
(99.6 %id)
DB459932 testis .e 1 to 450 1 to 450   tiling clone,   450/450
(100 %)
3 diff
(99.4 %id)
DB462711 testis .e 1 to 491 1 to 491       491/491
(100 %)
4 diff
(99.2 %id)
BG430877 Kidney .f 1 to 666 1 to 666 exact tiling clone,   666/670
(99 %)
21 diff
(96.9 %id)
BP359602 mammary gland .g 1 to 497 1 to 497 exact tiling clone,   497/497
(100 %)
3 diff
(99.4 %id)
BG562801 Liver .h 1 to 617 1 to 620 exact tiling clone,   620/620
(100 %)
10 diff
(98.4 %id)
DW421917 Liver .i-u 1 to 282 296 to 15 N11I tiling clone,   282/296
(95 %)
0 diff
(100 %id)
BX116034 liver and spleen Gene ABCC2, variant not shown         Suspected internal deletion, this clone was ignored    
AV647272 corresponding non cancerous liver tissue Gene ABCC2, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV653922 corresponding non cancerous liver tissue Gene ABCC2, variant not shown         Submitted on the opposite strand    
AV656541 corresponding non cancerous liver tissue Gene ABCC2, variant not shown         Submitted on the opposite strand    
AV656926 corresponding non cancerous liver tissue Gene ABCC2, variant not shown         Submitted on the opposite strand    
AV660925 corresponding non cancerous liver tissue Gene ABCC2, variant not shown         Submitted on the opposite strand    
AV660932 corresponding non cancerous liver tissue Gene ABCC2, variant not shown         Submitted on the opposite strand    
AV661100 corresponding non cancerous liver tissue Gene ABCC2, variant not shown         Submitted on the opposite strand    
BP276466 Kidney Gene ABCC2, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI