To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene ABCB4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
30 supporting clones for gene ABCB4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BG772586 testis .a 1 to 697 1 to 701       701/702
(99 %)
21 diff
(97.1 %id)
BC042531 testis .a 6 to 4024 1 to 4019   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 4019/4019
(100 %)
3 diff
(100.0 %id)
NM_018849.2   .a 42 to 4029 1 to 3988   RefSeq,   3988/3988
(100 %)
0 diff
(100 %id)
BF885506 testis_normal .a 1123 to 1400 15 to 288       273/288
(94 %)
7 diff
(97.6 %id)
BQ324988 colon_ins .a 1765 to 2327 10 to 574       565/574
(98 %)
6 diff
(99.0 %id)
AI141909 heart .a 2182 to 2244 63 to 1       63/63
(100 %)
0 diff
(100 %id)
X06181   .a 2683 to 4029 1 to 1348       1348/1348
(100 %)
1 diff
(100.0 %id)
BE090140 breast .a 2822 to 3238 434 to 18     Submitted on the opposite strand 417/434
(96 %)
8 diff
(98.2 %id)
BX392299 Neuroblastoma Cot 25-normalized .a 3200 to 4023 819 to 1       819/880
(93 %)
25 diff
(97.2 %id)
AI922477 adenocarcinoma, Pancreas .a 3476 to 3816 337 to 1       337/337
(100 %)
24 diff
(92.9 %id)
NM_000443.3   .b 1 to 3967 1 to 3967 exact RefSeq,   3967/3967
(100 %)
0 diff
(100 %id)
M23234   .b 45 to 3967 1 to 3924 exact tiling clone,   3924/3924
(100 %)
2 diff
(100.0 %id)
BX325245   .b 1756 to 2735 1 to 975       975/993
(98 %)
11 diff
(98.9 %id)
BX325244   .b 2908 to 3955 1040 to 1       1040/1065
(97 %)
9 diff
(99.2 %id)
NM_018850.2   .c 1 to 3826 1 to 3826 exact RefSeq,   3826/3826
(100 %)
0 diff
(100 %id)
BX282642 lymph, lymphoma, cell line .c 2887 to 3385 1 to 499   tiling clone,   499/499
(100 %)
0 diff
(100 %id)
BF796582 lymph, lymphoma, cell line .c 2888 to 3574 1 to 693   tiling clone,   693/944
(73 %)
16 diff
(98.4 %id)
BG618391 Liver .d 1 to 791 1 to 800 K157N tiling clone, available from MGC,   800/801
(99 %)
23 diff
(97.2 %id)
BC020618 Liver .d 21 to 1108 1 to 1088   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 1088/1088
(100 %)
1 diff
(100.0 %id)
BM918731 pooled pancreas and spleen .e 1 to 608 60 to 671   tiling clone,   612/1328
(46 %)
27 diff
(98.0 %id)
CD245608 White Matter .e 500 to 1299 1 to 804   tiling clone,   804/896
(89 %)
13 diff
(98.6 %id)
BF671299 muscle (skeletal) .e 1219 to 1953 2 to 750   tiling clone,   678/876
(77 %)
28 diff
(96.9 %id)
CN429004 embryonic stem cells, cell lines H1, H7, andH9 .f 1 to 746 1 to 746 P144S tiling clone,   746/748
(99 %)
4 diff
(99.5 %id)
AA677416 liver and spleen .g 1 to 523 523 to 1 exact tiling clone,   523/523
(100 %)
0 diff
(100 %id)
Z35284 Liver .h 1 to 2007 27 to 2032 exact tiling clone,   2006/2065
(97 %)
7 diff
(99.7 %id)
AI708606 colon .i-u 1 to 379 379 to 1 exact tiling clone,   379/379
(100 %)
0 diff
(100 %id)
AW936993 denis_drash Gene ABCB4, variant not shown              
H52078 liver and spleen Gene ABCB4, variant not shown              
H52079 liver and spleen Gene ABCB4, variant not shown              
AA864630 germinal center B cell Gene ABCB4, variant not shown       AAA      
AI817411 normal prostate, Prostate Gene ABCB4, variant not shown              
BE674839 B-cell, chronic lymphotic leukemia Gene ABCB4, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI