cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
DA000168 | .b | 827 to 1519 | 2 to 693 | capped | 692/697 (99 %) | 5 diff (99.3 %id) | |||
DA002728 | .k | 18 to 590 | 2 to 574 | capped | 573/573 (100 %) | 1 diff (99.9 %id) | |||
AF039235 | Hip | .b | 674 to 2541 | 1 to 1866 | F2V P22A A29S Q47L V103L ... | tiling clone, | 1866/1866 (100 %) | 17 diff (99.1 %id) | |
AA249437 | .o | 1083 to 1372 | 287 to 1 | Submitted on the opposite strand | 287/287 (100 %) | 5 diff (98.3 %id) | |||
AA315994 | colon | .b | 1342 to 1688 | 1 to 364 | 364/364 (100 %) | 6 diff (98.4 %id) | |||
AA358918 | lung | .b | 1416 to 1744 | 1 to 330 | 330/331 (99 %) | 4 diff (98.8 %id) | |||
AA359868 | lung | .b | 1892 to 2165 | 1 to 274 | 274/278 (98 %) | 4 diff (98.6 %id) | |||
AA362530 | .c | 1330 to 1668 | 1 to 341 | 341/341 (100 %) | 3 diff (99.2 %id) | ||||
AA373939 | lung | .b | 1542 to 1872 | 1 to 331 | 331/331 (100 %) | 1 diff (99.7 %id) | |||
BP193747 | brain | .e | 1 to 582 | 1 to 583 | 583/583 (100 %) | 6 diff (99.0 %id) | |||
AI902903 | breast | .b | 2036 to 2362 | 21 to 357 | 346/357 (96 %) | 58 diff (83.8 %id) | |||
AK056965 | skeletal muscle | .o | 456 to 1876 | 12 to 1432 | tiling clone, available from FLJ, | 1421/1421 (100 %) | 1 diff (100.0 %id) | ||
AK093402 | testis | .vd | 48 to 1725 | 1 to 1678 | tiling clone, available from FLJ, | 1678/1679 (99 %) | 3 diff (99.9 %id) | ||
AK094084 | .b | 826 to 2551 | 1 to 1726 | tiling clone, available from FLJ, | 1726/1726 (100 %) | 1 diff (100.0 %id) | |||
AK295447 | hippocampus | .b | 380 to 2529 | 1 to 2150 | exact | tiling clone, | 2150/2150 (100 %) | 1 diff (100.0 %id) | |
AK309477 | .j | 1 to 985 | 1 to 985 | S215G | tiling clone, | 985/985 (100 %) | 4 diff (99.6 %id) | ||
AW602697 | breast | .b | 1815 to 2197 | 383 to 1 | 383/383 (100 %) | 9 diff (97.7 %id) | |||
AW610510 | uterus | .q | 1 to 590 | 15 to 598 | E104G | tiling clone, | 590/632 (93 %) | 19 diff (97.0 %id) | |
AW803950 | uterus | .b | 1607 to 2098 | 19 to 511 | 493/511 (96 %) | 10 diff (98.1 %id) | |||
AW803959 | uterus | .b | 1607 to 2084 | 23 to 500 | 478/500 (95 %) | 10 diff (98.0 %id) | |||
AW851079 | colon | .vk | 1 to 418 | 420 to 1 | L19S F20L Q21S V22G W23V ... | tiling clone, | 420/608 (69 %) | 3 diff (99.6 %id) | |
AW862013 | colon | .vi | 106 to 260 | 22 to 177 | 156/177 (88 %) | 6 diff (96.7 %id) | |||
AW879613 | ovary | .c | 1414 to 1696 | 52 to 336 | 285/336 (84 %) | 12 diff (96.5 %id) | |||
AW957509 | .b | 1543 to 2085 | 1 to 543 | 543/544 (99 %) | 4 diff (99.3 %id) | ||||
AW959714 | .b | 1893 to 2514 | 1 to 624 | 624/625 (99 %) | 25 diff (96.0 %id) | ||||
AX748103 | .vd | 48 to 1725 | 1 to 1678 | 1678/1679 (99 %) | 3 diff (99.9 %id) | ||||
T19862 | .c | 1459 to 1617 | 160 to 3 | 158/160 (98 %) | 5 diff (96.9 %id) | ||||
BC004172 | Lung, small cell carcinoma | .c | 1 to 1788 | 1 to 1788 | exact | tiling clone, available from MGC, AAA | 1788/1788 (100 %) | 1 diff (100.0 %id) | |
BC019324 | Lung, small cell carcinoma | .c | 1 to 1788 | 1 to 1788 | available from MGC, AAA | 1788/1788 (100 %) | 1 diff (100.0 %id) | ||
BF081449 | amnion_normal | .b | 889 to 1140 | 38 to 288 | 251/293 (85 %) | 14 diff (95.3 %id) | |||
BF351481 | head_neck | .b | 1517 to 1795 | 15 to 293 | 279/293 (95 %) | 6 diff (98.0 %id) | |||
BF351485 | head_neck | .b | 1578 to 1795 | 1 to 223 | 227/223 (101 %) | 14 diff (93.8 %id) | |||
BF375486 | stomach | .b | 1426 to 1736 | 1 to 313 | 313/313 (100 %) | 3 diff (99.1 %id) | |||
BF839159 | head_neck | .b | 1415 to 1640 | 17 to 245 | 228/270 (84 %) | 10 diff (96.3 %id) | |||
BF842268 | head_neck | .ve | 30 to 586 | 80 to 636 | tiling clone, | 557/637 (87 %) | 20 diff (96.9 %id) | ||
BF855631 | prostate_normal | .b | 1759 to 2139 | 17 to 395 | 379/395 (95 %) | 17 diff (95.7 %id) | |||
BF894056 | marrow | .b | 1755 to 2003 | 264 to 10 | Submitted on the opposite strand | 255/266 (95 %) | 4 diff (98.5 %id) | ||
BF896987 | marrow | .vh | 51 to 394 | 6 to 350 | W9C V25A | 351/350 (100 %) | 13 diff (96.3 %id) | ||
BF901406 | marrow | .vh | 60 to 476 | 1 to 416 | 416/416 (100 %) | 2 diff (99.6 %id) | |||
BQ354869 | head_neck | .t-u | 1 to 363 | 363 to 1 | E56A I58L R59T E68D S70N ... | tiling clone, | 363/363 (100 %) | 18 diff (95.1 %id) | |
DA063701 | cerebellum | .s | 1 to 546 | 2 to 547 | exact | tiling clone, capped | 546/546 (100 %) | 1 diff (99.9 %id) | |
DA171639 | amygdala | .e | 12 to 571 | 2 to 562 | capped | 561/561 (100 %) | 2 diff (99.7 %id) | ||
DC320008 | brain | .b | 490 to 919 | 1 to 430 | 430/430 (100 %) | 1 diff (99.8 %id) | |||
DC329857 | hippocampus | .b | 380 to 948 | 1 to 569 | 569/569 (100 %) | 0 diff (100 %id) | |||
DA294061 | hippocampus | .k | 30 to 604 | 2 to 578 | capped | 577/577 (100 %) | 3 diff (99.5 %id) | ||
DA343911 | substantia nigra | .vd | 1 to 553 | 2 to 555 | tiling clone, capped | 554/554 (100 %) | 2 diff (99.7 %id) | ||
DA365421 | subthalamic nucleus | .vj | 1 to 477 | 2 to 479 | tiling clone, capped | 478/478 (100 %) | 6 diff (98.8 %id) | ||
BX097846 | .c | 1423 to 1788 | 381 to 15 | AAA | 367/367 (100 %) | 3 diff (99.2 %id) | |||
C01220 | .b | 2096 to 2325 | 1 to 233 | 233/268 (86 %) | 6 diff (97.8 %id) | ||||
CF124179 | CNCAP(3)T-225 cell line, Prostate | .o | 1215 to 1836 | 38 to 658 | 621/658 (94 %) | 6 diff (99.1 %id) | |||
CN258731 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .k | 295 to 1005 | 1 to 711 | tiling clone, | 711/711 (100 %) | 0 diff (100 %id) | ||
CN258733 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .e | 38 to 729 | 1 to 693 | 693/693 (100 %) | 5 diff (99.3 %id) | |||
DA427540 | colon | .b | 828 to 1362 | 2 to 536 | capped | 535/535 (100 %) | 1 diff (99.9 %id) | ||
CR608238 | neuroblastoma | .e | 34 to 1322 | 1 to 1289 | exact | tiling clone, | 1289/1289 (100 %) | 0 diff (100 %id) | |
CR613084 | neuroblastoma | .d | 1 to 1670 | 1 to 1670 | exact | tiling clone, | 1670/1670 (100 %) | 0 diff (100 %id) | |
CR617160 | fetal liver | .r | 1 to 1388 | 2 to 1389 | exact | tiling clone, | 1389/1389 (100 %) | 0 diff (100 %id) | |
CR619011 | fetal brain | .a | 1 to 2018 | 1 to 2018 | exact | tiling clone, | 2018/2018 (100 %) | 0 diff (100 %id) | |
CR621048 | Neuroblastoma Cot 25-normalized | .c | 35 to 1735 | 1 to 1701 | exact | tiling clone, | 1701/1701 (100 %) | 0 diff (100 %id) | |
AL515976 | brain, neuroblastoma, neuroblastoma cells | .e | 800 to 1322 | 526 to 1 | fully sequenced, | 526/526 (100 %) | 4 diff (99.3 %id) | ||
AL515977 | brain, neuroblastoma, neuroblastoma cells | .e | 34 to 861 | 1 to 828 | fully sequenced, | 828/828 (100 %) | 4 diff (99.6 %id) | ||
AL518643 | brain, neuroblastoma, neuroblastoma cells | .b | 1473 to 2533 | 1060 to 1 | 1060/1060 (100 %) | 11 diff (99.0 %id) | |||
AL518644 | brain, neuroblastoma, neuroblastoma cells | .d | 1 to 1021 | 1 to 1021 | 1021/1021 (100 %) | 12 diff (98.9 %id) | |||
BX424042 | neuroblastoma | .b | 1593 to 2489 | 931 to 37 | 781/931 (83 %) | 39 diff (95.9 %id) | |||
BX424043 | neuroblastoma | .d | 3 to 885 | 1 to 882 | 882/882 (100 %) | 13 diff (98.6 %id) | |||
AL520188 | brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized | .b | 862 to 1790 | 1 to 927 | fully sequenced, | 927/927 (100 %) | 4 diff (99.6 %id) | ||
AL561860 | brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized | .b | 1763 to 2507 | 745 to 1 | fully sequenced, | 745/745 (100 %) | 16 diff (97.9 %id) | ||
AL527833 | brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized | .c | 35 to 904 | 1 to 863 | fully sequenced, | 863/863 (100 %) | 2 diff (99.8 %id) | ||
AL562989 | brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized | .c | 843 to 1735 | 892 to 1 | fully sequenced, | 892/892 (100 %) | 5 diff (99.5 %id) | ||
AL539433 | brain, fetal brain | .b | 1474 to 2525 | 1044 to 1 | 1044/1044 (100 %) | 12 diff (98.9 %id) | |||
AL539434 | brain, fetal brain | .a | 1 to 1043 | 1 to 1036 | 1036/1042 (99 %) | 14 diff (98.7 %id) | |||
BX411331 | brain, fetal brain | .b | 860 to 1636 | 773 to 1 | 771/882 (87 %) | 34 diff (96.2 %id) | |||
BX406720 | fetal liver, Liver | .r | 753 to 1388 | 635 to 1 | fully sequenced, | 635/635 (100 %) | 14 diff (97.8 %id) | ||
BX406721 | fetal liver, Liver | .r | 1 to 783 | 2 to 784 | exact | fully sequenced, | 784/784 (100 %) | 0 diff (100 %id) | |
CV027183 | mixed | .b | 909 to 1602 | 1 to 694 | 694/694 (100 %) | 1 diff (99.9 %id) | |||
BX505832 | .vd | 128 to 648 | 1 to 523 | 523/526 (99 %) | 5 diff (99.1 %id) | ||||
DT215440 | brain | .k | 32 to 684 | 1 to 653 | 653/653 (100 %) | 1 diff (99.9 %id) | |||
EC480071 | Prostate | .b | 2204 to 2303 | 1 to 100 | 100/100 (100 %) | 0 diff (100 %id) | |||
BP232842 | muscle | .l | 1 to 584 | 1 to 583 | tiling clone, | 583/583 (100 %) | 3 diff (99.5 %id) | ||
D80898 | brain | .f | 1324 to 1713 | 391 to 1 | tiling clone, | 391/393 (99 %) | 2 diff (99.5 %id) | ||
D80899 | brain | .f | 904 to 1323 | 1 to 418 | tiling clone, | 416/430 (96 %) | 7 diff (98.4 %id) | ||
AV651124 | corresponding non cancerous liver tissue | .c | 1501 to 1788 | 1 to 288 | AAA | Submitted on the opposite strand | 288/288 (100 %) | 4 diff (98.7 %id) | |
DB460943 | testis | .e | 33 to 513 | 1 to 481 | 481/481 (100 %) | 1 diff (99.8 %id) | |||
DB526342 | testis | .c | 1337 to 1788 | 1 to 452 | Submitted on the opposite strand | 452/452 (100 %) | 0 diff (100 %id) | ||
DB463561 | hippocampus | .e | 11 to 437 | 1 to 428 | 428/428 (100 %) | 7 diff (98.4 %id) | |||
DB529473 | hippocampus | .c | 1348 to 1788 | 1 to 440 | Submitted on the opposite strand | 440/440 (100 %) | 4 diff (99.1 %id) | ||
BP395567 | pancreatic islet | .l | 567 to 1059 | 1 to 494 | tiling clone, | Submitted on the opposite strand | 494/499 (98 %) | 2 diff (99.6 %id) | |
DA556125 | .e | 33 to 591 | 2 to 560 | capped | 559/559 (100 %) | 2 diff (99.7 %id) | |||
BY797104 | eye | .e | 45 to 632 | 1 to 588 | 588/588 (100 %) | 3 diff (99.5 %id) | |||
BJ989548 | hepatoblastoma | .e | 11 to 595 | 1 to 585 | 585/585 (100 %) | 1 diff (99.9 %id) | |||
BJ989549 | hepatoblastoma | .e | 817 to 1296 | 480 to 1 | 480/480 (100 %) | 0 diff (100 %id) | |||
BP246845 | Kidney | .h | 1 to 579 | 1 to 581 | tiling clone, | 581/581 (100 %) | 5 diff (99.2 %id) | ||
W81431 | heart | .p | 1 to 357 | 1 to 358 | tiling clone, | 358/359 (99 %) | 6 diff (98.4 %id) | ||
W81432 | heart | .p | 658 to 975 | 318 to 1 | tiling clone, | 318/318 (100 %) | 0 diff (100 %id) | ||
AA040597 | heart | .h | 1502 to 1899 | 400 to 1 | tiling clone, fully sequenced, | 400/400 (100 %) | 6 diff (98.5 %id) | ||
AA040679 | heart | .h | 1150 to 1532 | 1 to 384 | tiling clone, fully sequenced, | 384/384 (100 %) | 6 diff (98.5 %id) | ||
AA180775 | muscle, skeletal muscle | .o | 1375 to 1861 | 495 to 1 | fully sequenced, | 495/495 (100 %) | 5 diff (99.0 %id) | ||
AA180872 | muscle, skeletal muscle | .o | 1000 to 1405 | 1 to 410 | fully sequenced, | 410/410 (100 %) | 4 diff (99.1 %id) | ||
AA634307 | .k | 938 to 1278 | 340 to 2 | 339/340 (99 %) | 0 diff (100 %id) | ||||
AA489585 | .b | 1876 to 2106 | 23 to 254 | 232/254 (91 %) | 9 diff (96.5 %id) | ||||
AA497000 | .b | 2157 to 2553 | 396 to 1 | tiling clone, | 396/396 (100 %) | 1 diff (99.8 %id) | |||
AA559846 | bone marrow, stem cells | .c | 1368 to 1788 | 432 to 12 | AAA | 421/422 (99 %) | 4 diff (99.1 %id) | ||
AA625161 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .c | 1332 to 1788 | 1 to 455 | 455/455 (100 %) | 7 diff (98.5 %id) | |||
AA738423 | pooled germ cell tumors | .c | 1506 to 1790 | 286 to 3 | 284/286 (99 %) | 1 diff (99.7 %id) | |||
AA918570 | pooled | .c | 1475 to 1790 | 318 to 5 | 314/318 (98 %) | 0 diff (100 %id) | |||
AA954586 | pooled | .c | 1536 to 1788 | 252 to 1 | 252/252 (100 %) | 4 diff (98.5 %id) | |||
AA928147 | pooled | .k | 1095 to 1278 | 189 to 7 | 183/189 (96 %) | 0 diff (100 %id) | |||
AA934553 | pooled germ cell tumors | .c | 1350 to 1788 | 437 to 1 | 437/437 (100 %) | 4 diff (99.1 %id) | |||
AI056650 | liver and spleen | .o | 847 to 1254 | 416 to 9 | 408/416 (98 %) | 0 diff (100 %id) | |||
AI140327 | heart | .k | 832 to 1277 | 446 to 1 | 446/446 (100 %) | 0 diff (100 %id) | |||
AI093187 | heart | .k | 779 to 1278 | 502 to 3 | tiling clone, | 500/502 (99 %) | 0 diff (100 %id) | ||
AI185996 | lung | .k | 895 to 1278 | 389 to 6 | 384/389 (98 %) | 0 diff (100 %id) | |||
AI201269 | .c | 1353 to 1790 | 440 to 3 | 438/440 (99 %) | 0 diff (100 %id) | ||||
AI243335 | pooled | .c | 1407 to 1790 | 386 to 3 | 384/386 (99 %) | 1 diff (99.8 %id) | |||
AI287612 | placenta | .o | 929 to 1254 | 341 to 16 | AAA | 326/326 (100 %) | 0 diff (100 %id) | ||
AI275613 | placenta | .o | 851 to 1254 | 419 to 16 | AAA | 404/404 (100 %) | 0 diff (100 %id) | ||
AI312767 | lung | .va | 1 to 397 | 409 to 13 | T6P | tiling clone, AAA | 397/397 (100 %) | 2 diff (99.5 %id) | |
AI340100 | .o | 775 to 1254 | 484 to 5 | 480/484 (99 %) | 0 diff (100 %id) | ||||
AI203368 | pooled germ cell tumors | .k | 857 to 1278 | 421 to 1 | 421/421 (100 %) | 1 diff (99.8 %id) | |||
AI354976 | esophagus, squamous cell carcinoma | .c | 1330 to 1788 | 459 to 1 | 459/459 (100 %) | 0 diff (100 %id) | |||
AI432152 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .k | 1084 to 1276 | 215 to 23 | AAA | 193/193 (100 %) | 3 diff (98.5 %id) | ||
AI887841 | carcinoid, lung | .c | 1405 to 1789 | 384 to 1 | 384/384 (100 %) | 1 diff (99.8 %id) | |||
AI571378 | anaplastic oligodendroglioma, brain | .c | 1305 to 1790 | 489 to 5 | 485/489 (99 %) | 1 diff (99.8 %id) | |||
AI810550 | Prostate | .c | 1505 to 1788 | 284 to 1 | 284/284 (100 %) | 0 diff (100 %id) | |||
AI680102 | Prostate | .c | 1340 to 1788 | 449 to 1 | 449/449 (100 %) | 0 diff (100 %id) | |||
AI700879 | Kidney | .c | 1445 to 1788 | 345 to 1 | 345/345 (100 %) | 6 diff (98.3 %id) | |||
AI698559 | pooled | .c | 1564 to 1789 | 226 to 1 | 226/226 (100 %) | 0 diff (100 %id) | |||
AI824923 | pooled germ cell tumors | .c | 1500 to 1788 | 304 to 16 | AAA | 289/289 (100 %) | 0 diff (100 %id) | ||
AI671153 | pooled germ cell tumors | .c | 1474 to 1790 | 317 to 1 | 317/317 (100 %) | 0 diff (100 %id) | |||
AI916936 | pooled germ cell tumors | .b | 1392 to 1696 | 415 to 111 | 305/415 (73 %) | 2 diff (99.6 %id) | |||
AI867799 | pooled germ cell tumors | .c | 1506 to 1788 | 295 to 12 | AAA | 284/288 (98 %) | 1 diff (99.7 %id) | ||
AI669256 | Prostate | .c | 1221 to 1788 | 568 to 1 | 568/568 (100 %) | 0 diff (100 %id) | |||
AI738973 | colon, colon tumor, RER+ | .vi | 127 to 532 | 411 to 6 | exact | 406/411 (98 %) | 4 diff (99.1 %id) | ||
AI763048 | 2 pooled tumors (clear cell type), Kidney | .c | 1253 to 1790 | 541 to 4 | 538/541 (99 %) | 0 diff (100 %id) | |||
AI927665 | Kidney | .vi | 1 to 539 | 539 to 1 | exact | tiling clone, | 539/539 (100 %) | 2 diff (99.7 %id) | |
AI991982 | anaplastic oligodendroglioma, brain | .c | 1374 to 1790 | 417 to 1 | 417/417 (100 %) | 0 diff (100 %id) | |||
AW087508 | pooled | .va | 90 to 395 | 319 to 14 | 306/319 (95 %) | 0 diff (100 %id) | |||
AW119180 | pooled | .c | 1344 to 1788 | 445 to 1 | 445/448 (99 %) | 1 diff (99.8 %id) | |||
AW152391 | serous papillary carcinoma, high grade, 2pooled tumors, uterus | .vb | 1 to 457 | 461 to 5 | exact | tiling clone, | 457/461 (99 %) | 0 diff (100 %id) | |
AW237088 | pooled germ cell tumors | .c | 1284 to 1788 | 523 to 19 | AAA | 505/505 (100 %) | 3 diff (99.5 %id) | ||
AW015872 | .o | 791 to 1253 | 480 to 18 | AAA | 463/463 (100 %) | 0 diff (100 %id) | |||
AW296090 | .c | 1328 to 1788 | 476 to 16 | AAA | 461/461 (100 %) | 0 diff (100 %id) | |||
AW268813 | pooled | .k | 883 to 1278 | 403 to 8 | 396/403 (98 %) | 0 diff (100 %id) | |||
AW245514 | lung, small cell carcinoma | .c | 1 to 568 | 10 to 577 | 568/577 (98 %) | 7 diff (98.8 %id) | |||
AW245958 | lung, small cell carcinoma | .c | 1249 to 1786 | 551 to 14 | 538/551 (97 %) | 3 diff (99.5 %id) | |||
AW471359 | adenocarcinoma, Pancreas | .c | 1260 to 1790 | 531 to 1 | 531/531 (100 %) | 0 diff (100 %id) | |||
AW594519 | pooled germ cell tumors | .c | 1479 to 1788 | 325 to 16 | AAA | 310/310 (100 %) | 5 diff (98.4 %id) | ||
AW627984 | pooled | .va | 59 to 397 | 352 to 13 | T6H K7Q I8D L9P Q10A ... | tiling clone, AAA | 340/340 (100 %) | 1 diff (99.8 %id) | |
BE048943 | Kidney | .c | 1280 to 1789 | 510 to 1 | 510/510 (100 %) | 0 diff (100 %id) | |||
BE218265 | carcinoid, lung | .vi | 53 to 537 | 496 to 12 | exact | AAA | 485/485 (100 %) | 2 diff (99.6 %id) | |
BE465035 | carcinoid, lung | .c | 1301 to 1788 | 498 to 11 | AAA | 488/488 (100 %) | 0 diff (100 %id) | ||
BE504977 | pooled germ cell tumors | .k | 875 to 1276 | 413 to 12 | AAA | 402/402 (100 %) | 0 diff (100 %id) | ||
BF588584 | colon, colon tumor, RER+ | .k | 1084 to 1276 | 193 to 1 | 193/193 (100 %) | 0 diff (100 %id) | |||
BE255473 | eye, retinoblastoma | .e | 54 to 679 | 1 to 626 | 626/626 (100 %) | 1 diff (99.9 %id) | |||
BF941683 | Prostate | .c | 1518 to 1788 | 285 to 15 | AAA | 271/271 (100 %) | 0 diff (100 %id) | ||
BF056945 | pooled germ cell tumors | .b | 1707 to 1938 | 232 to 1 | 232/232 (100 %) | 10 diff (95.7 %id) | |||
BE539215 | cervix | .c | 1414 to 1790 | 1 to 378 | 378/580 (65 %) | 5 diff (99.2 %id) | |||
BE541583 | cervix | .k | 27 to 777 | 1 to 756 | 754/796 (94 %) | 26 diff (96.8 %id) | |||
BF109428 | pooled | .k | 864 to 1278 | 421 to 7 | 415/421 (98 %) | 0 diff (100 %id) | |||
BE295742 | muscle, rhabdomyosarcoma | .b | 1629 to 2248 | 1 to 627 | 625/627 (99 %) | 11 diff (98.3 %id) | |||
BE265637 | lung, small cell carcinoma | .b | 1641 to 2171 | 1 to 530 | 530/530 (100 %) | 1 diff (99.9 %id) | |||
BF221729 | Prostate | .c | 1518 to 1790 | 273 to 1 | 273/273 (100 %) | 0 diff (100 %id) | |||
BE389927 | endometrium, adenocarcinoma cell line, uterus | .i | 575 to 1221 | 1 to 645 | tiling clone, | 645/688 (93 %) | 8 diff (98.9 %id) | ||
BF434050 | fibrotheoma, ovary | .ve | 64 to 579 | 516 to 1 | tiling clone, | 516/516 (100 %) | 1 diff (99.9 %id) | ||
BF436895 | Prostate | .c | 1249 to 1788 | 540 to 1 | 540/540 (100 %) | 1 diff (99.9 %id) | |||
BE873364 | adenocarcinoma, colon | .e | 56 to 790 | 1 to 743 | 743/965 (76 %) | 37 diff (96.2 %id) | |||
BE779363 | eye, retinoblastoma | .b | 1281 to 2002 | 1 to 736 | 734/872 (84 %) | 45 diff (94.9 %id) | |||
BF185811 | brain, glioblastoma | .e | 30 to 733 | 1 to 696 | 698/721 (96 %) | 14 diff (98.1 %id) | |||
BF214501 | bone marrow, from acute myelogenous leukemia | .e | 22 to 581 | 1 to 565 | 565/862 (65 %) | 20 diff (97.7 %id) | |||
BF974152 | B-cells, primary B-cells from tonsils (cell line) | .e | 38 to 657 | 1 to 619 | 619/619 (100 %) | 3 diff (99.6 %id) | |||
BG107205 | lymph, lymphoma, cell line | .e | 35 to 787 | 1 to 751 | 751/953 (78 %) | 15 diff (98.5 %id) | |||
BG104425 | melanotic melanoma, skin | .b | 1603 to 2324 | 1 to 716 | 716/895 (80 %) | 15 diff (98.4 %id) | |||
BG120461 | adenocarcinoma, cell line, Liver | .h | 1269 to 1894 | 1 to 623 | tiling clone, | 623/623 (100 %) | 3 diff (99.6 %id) | ||
BG435439 | placenta | .k | 717 to 1274 | 1 to 560 | AAA | 560/560 (100 %) | 6 diff (99.0 %id) | ||
BG496181 | lung, mucoepidermoid carcinoma | .k | 40 to 826 | 1 to 788 | 786/860 (91 %) | 31 diff (96.4 %id) | |||
BG574018 | breast, mammary adenocarcinoma, cell line | .e | 25 to 774 | 1 to 750 | 750/750 (100 %) | 1 diff (99.9 %id) | |||
BG567969 | Liver | .e | 22 to 835 | 1 to 815 | 815/962 (84 %) | 26 diff (97.3 %id) | |||
BG677083 | skin, squamous cell carcinoma | .b | 1419 to 2184 | 1 to 763 | 763/763 (100 %) | 5 diff (99.4 %id) | |||
BG742256 | skin | .e | 39 to 675 | 1 to 637 | 637/637 (100 %) | 1 diff (99.9 %id) | |||
BG776211 | lung, mucoepidermoid carcinoma | .n | 1 to 758 | 1 to 762 | L58C Y59T N60M E61R I62* | tiling clone, | 762/859 (88 %) | 19 diff (97.8 %id) | |
BG766045 | melanotic melanoma, high MDR (cell line), skin | .k | 31 to 762 | 1 to 735 | 735/735 (100 %) | 9 diff (98.8 %id) | |||
BG760175 | B-cells, primary B-cells from tonsils (cell line) | .e | 38 to 714 | 1 to 681 | 679/681 (99 %) | 11 diff (98.4 %id) | |||
BG829368 | muscle, rhabdomyosarcoma | .c | 1406 to 1786 | 1 to 382 | 382/659 (57 %) | 7 diff (99.0 %id) | |||
BI160277 | epithelioid carcinoma cell line, Pancreas | .c | 1227 to 1788 | 1 to 559 | AAA | 559/559 (100 %) | 3 diff (99.5 %id) | ||
BI113730 | muscle, rhabdomyosarcoma | .e | 39 to 693 | 1 to 658 | 658/659 (99 %) | 8 diff (98.8 %id) | |||
BI827773 | brain, medulla | .e | 42 to 792 | 1 to 754 | 752/755 (99 %) | 17 diff (97.8 %id) | |||
BI826930 | brain, medulla | .e | 39 to 785 | 1 to 749 | 749/749 (100 %) | 3 diff (99.6 %id) | |||
BI826513 | brain, medulla | .e | 39 to 673 | 1 to 635 | 635/635 (100 %) | 1 diff (99.9 %id) | |||
BI756531 | brain | .e | 39 to 835 | 1 to 804 | 804/1031 (77 %) | 13 diff (98.8 %id) | |||
BI917583 | brain | .vc | 1 to 748 | 1 to 749 | exact | tiling clone, | 749/749 (100 %) | 9 diff (98.8 %id) | |
BI459311 | testis | .b | 31 to 613 | 1 to 585 | 585/589 (99 %) | 15 diff (97.5 %id) | |||
BI461289 | testis | .b | 24 to 774 | 1 to 754 | 754/754 (100 %) | 12 diff (98.5 %id) | |||
BI667159 | brain, hypothalamus | .e | 18 to 872 | 1 to 857 | 857/863 (99 %) | 23 diff (97.4 %id) | |||
BM551483 | astrocytoma grade IV, cell line, brain | .e | 37 to 831 | 1 to 799 | 799/1081 (73 %) | 9 diff (99.2 %id) | |||
BM461520 | eye, retinoblastoma | .o | 794 to 1727 | 24 to 967 | tiling clone, | 944/1041 (90 %) | 33 diff (96.9 %id) | ||
BM803564 | leiomyosarcoma, uterus | .b | 1590 to 2348 | 1 to 767 | 767/1110 (69 %) | 12 diff (99.0 %id) | |||
BM564836 | eye, retinoblastoma | .e | 40 to 626 | 1 to 588 | 588/1156 (50 %) | 27 diff (97.7 %id) | |||
BM545814 | ovary (pool of 3) | .e | 34 to 889 | 1 to 867 | 865/974 (88 %) | 22 diff (97.8 %id) | |||
BM811317 | ovary (pool of 3) | .k | 48 to 950 | 26 to 931 | 906/1109 (81 %) | 17 diff (98.5 %id) | |||
BQ278878 | adenocarcinoma, cell line, breast | .f | 402 to 1425 | 1 to 1033 | tiling clone, | 1033/1041 (99 %) | 30 diff (97.2 %id) | ||
BQ021729 | lung, Metastatic Chondrosarcoma | .c | 1344 to 1788 | 461 to 17 | AAA | 445/453 (98 %) | 0 diff (100 %id) | ||
BQ004557 | Chondrosarcoma, Left Pelvis | .c | 1167 to 1788 | 639 to 17 | AAA | 623/623 (100 %) | 2 diff (99.7 %id) | ||
BM990027 | lung, Lung Focal Fibrosis | .h | 414 to 1175 | 762 to 1 | tiling clone, | 762/762 (100 %) | 2 diff (99.8 %id) | ||
BQ016218 | lung, Metastatic Chondrosarcoma | .b | 1866 to 2551 | 703 to 17 | AAA | 687/687 (100 %) | 1 diff (99.9 %id) | ||
BQ070506 | brain, neuroblastoma, cell line | .b | 1052 to 1994 | 1 to 948 | 946/952 (99 %) | 20 diff (97.9 %id) | |||
BQ051447 | blood, natural killer cells, cell line | .b | 1349 to 2207 | 1 to 861 | 861/942 (91 %) | 15 diff (98.5 %id) | |||
BQ222363 | epithelioid carcinoma, Pancreas | .e | 56 to 818 | 1 to 768 | 768/895 (85 %) | 14 diff (98.5 %id) | |||
BU076520 | Pancreas, Purified pancreatic islet | .e | 36 to 491 | 1 to 456 | 456/456 (100 %) | 3 diff (99.4 %id) | |||
BQ423866 | eye, retinoblastoma | .e | 25 to 835 | 1 to 820 | 820/882 (92 %) | 13 diff (98.6 %id) | |||
BQ894079 | dorsal root ganglia | .ve | 543 to 1469 | 16 to 947 | tiling clone, | 932/956 (97 %) | 28 diff (97.1 %id) | ||
BQ649113 | hepatocellular carcinoma, cell line, Liver | .e | 40 to 596 | 1 to 559 | 559/998 (56 %) | 12 diff (98.8 %id) | |||
BQ644808 | hepatocellular carcinoma, cell line, Liver | .e | 40 to 669 | 1 to 630 | 630/948 (66 %) | 6 diff (99.4 %id) | |||
BQ894484 | Spleen | .e | 20 to 565 | 73 to 626 | 554/1171 (47 %) | 45 diff (96.2 %id) | |||
BU597861 | mixed (pool of 40 RNAs) | .e | 20 to 587 | 1 to 571 | 571/964 (59 %) | 21 diff (97.9 %id) | |||
BU599557 | mixed (pool of 40 RNAs) | .e | 20 to 792 | 1 to 777 | 777/787 (98 %) | 20 diff (97.5 %id) | |||
BU601530 | mixed (pool of 40 RNAs) | .e | 19 to 750 | 1 to 734 | 734/738 (99 %) | 8 diff (99.0 %id) | |||
BU508075 | leiomyosarcoma, uterus | .e | 41 to 884 | 1 to 846 | 846/993 (85 %) | 6 diff (99.4 %id) | |||
CA950887 | Pancreas, Purified pancreatic islet | .c | 1224 to 1787 | 564 to 1 | 564/564 (100 %) | 0 diff (100 %id) | |||
CA951145 | Pancreas, Purified pancreatic islet | .k | 1 to 579 | 1 to 579 | tiling clone, | 579/579 (100 %) | 7 diff (98.8 %id) | ||
CK903151 | Pancreas, Purified pancreatic islet | .k | 53 to 594 | 1 to 542 | Submitted on the opposite strand | 542/542 (100 %) | 2 diff (99.7 %id) | ||
CV813300 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .b | 1482 to 2182 | 1 to 701 | 701/702 (99 %) | 3 diff (99.6 %id) | |||
CX759270 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .vf | 1 to 726 | 1 to 725 | exact | tiling clone, | Submitted on the opposite strand | 725/725 (100 %) | 3 diff (99.6 %id) |
DR157982 | human embryonic stem cells differentiated toan early endodermal cell type | .e | 41 to 571 | 1 to 531 | 531/531 (100 %) | 1 diff (99.9 %id) | |||
CF272471 | Brain glioblastoma | .e | 20 to 832 | 1 to 821 | 821/881 (93 %) | 11 diff (98.8 %id) | |||
CF127852 | Chondrosarcoma Lung Metastasis cell lines, lung | .e | 19 to 789 | 1 to 772 | 770/772 (99 %) | 5 diff (99.4 %id) | |||
TI_57216895 | .e | 36 to 835 | 22 to 835 | AAA | 821/1052 (78 %) | 22 diff (98.0 %id) | |||
TI_57173006 | .e | 42 to 792 | 68 to 821 | 752/822 (91 %) | 20 diff (97.6 %id) | ||||
TI_57173227 | .b | 1287 to 1996 | 66 to 777 | 772/777 (99 %) | 57 diff (92.7 %id) | ||||
TI_57174120 | .b | 1287 to 1884 | 67 to 664 | 658/664 (99 %) | 55 diff (91.8 %id) | ||||
TI_57244806 | .vc | 1 to 748 | 40 to 788 | exact | 749/788 (95 %) | 9 diff (98.9 %id) | |||
TI_44342842 | .e | 23 to 872 | 87 to 938 | 852/944 (90 %) | 25 diff (97.4 %id) | ||||
CB114358 | Liver | .b | 1725 to 2198 | 1 to 474 | 474/474 (100 %) | 5 diff (99.0 %id) | |||
T27188 | .o | 650 to 825 | 1 to 176 | 176/176 (100 %) | 1 diff (99.5 %id) | ||||
T27189 | .b | 1579 to 1636 | 1 to 58 | 58/58 (100 %) | 1 diff (98.3 %id) | ||||
NM_025267.3 | .c | 1 to 1788 | 1 to 1788 | exact | RefSeq, AAA | 1788/1788 (100 %) | 0 diff (100 %id) | ||
NM_001136042.2 | .b | 380 to 2551 | 1 to 2172 | exact | RefSeq, AAA | 2172/2172 (100 %) | 0 diff (100 %id) | ||
NM_001142653.1 | .m | 1 to 1905 | 1 to 1905 | exact | RefSeq, AAA | 1905/1905 (100 %) | 0 diff (100 %id) | ||
NM_001142654.1 | .o | 1 to 1890 | 1 to 1890 | exact | RefSeq, AAA | 1890/1890 (100 %) | 0 diff (100 %id) | ||
DA781598 | brain | .e | 22 to 572 | 2 to 555 | capped | 554/554 (100 %) | 4 diff (99.3 %id) | ||
DA808187 | brain | .vg-u | 1 to 578 | 2 to 573 | L10S S12L G13I I15S L16F ... | tiling clone, capped | 572/572 (100 %) | 4 diff (99.4 %id) | |
DA808334 | brain | .vg-u | 1 to 571 | 2 to 566 | L10S S12L G13I I15S L16F ... | capped | 565/565 (100 %) | 4 diff (99.3 %id) | |
D20015 | .vi | 5 to 539 | 1 to 542 | A37G V38R R40S A41G R42Q ... | tiling clone, | Submitted on the opposite strand | 542/543 (99 %) | 14 diff (97.5 %id) | |
BM767505 | Ascites, stomach | .s | 421 to 981 | 1 to 561 | tiling clone, | 561/561 (100 %) | 0 diff (100 %id) | ||
BM834957 | stomach | .h | 684 to 1104 | 1 to 421 | tiling clone, | 421/421 (100 %) | 3 diff (99.3 %id) | ||
BQ083455 | stomach | .e | 23 to 263 | 1 to 241 | 241/241 (100 %) | 3 diff (98.8 %id) | |||
BM795647 | stomach | .b | 1840 to 2175 | 17 to 355 | 339/339 (100 %) | 4 diff (98.9 %id) | |||
BM817594 | stomach | .b | 1840 to 2351 | 17 to 531 | 515/515 (100 %) | 4 diff (99.3 %id) | |||
BM827274 | Ascites, stomach | .b | 1642 to 2241 | 1 to 600 | 600/600 (100 %) | 0 diff (100 %id) | |||
F31194 | pectoral muscle (after mastectomy) | .c | 1432 to 1649 | 1 to 217 | 216/217 (99 %) | 5 diff (97.7 %id) | |||
TI_1948085771 | .b | 903 to 1722 | 126 to 942 | fully sequenced, | 817/942 (86 %) | 24 diff (97.5 %id) | |||
TI_1948085772 | .b | 1692 to 2486 | 920 to 121 | fully sequenced, | 800/920 (86 %) | 9 diff (99.1 %id) | |||
TI_1948085916 | .b | 903 to 1648 | 126 to 869 | 744/1406 (52 %) | 15 diff (99.0 %id) | ||||
TI_1948085917 | .b | 1668 to 2485 | 940 to 122 | 819/1313 (62 %) | 7 diff (99.5 %id) | ||||
TI_1948086080 | .b | 903 to 1579 | 123 to 801 | 679/1485 (45 %) | 13 diff (99.2 %id) | ||||
TI_1948086081 | .b | 1575 to 2485 | 1036 to 125 | 912/1296 (70 %) | 14 diff (99.0 %id) | ||||
TI_1948086235 | .b | 903 to 1579 | 126 to 804 | 679/1487 (45 %) | 12 diff (99.2 %id) | ||||
DA893270 | skeletal muscle | .o | 452 to 901 | 8 to 457 | tiling clone, capped | 450/450 (100 %) | 1 diff (99.8 %id) | ||
DB330888 | skeletal muscle | .o | 1342 to 1876 | 535 to 1 | 535/535 (100 %) | 0 diff (100 %id) | |||
DA896440 | skeletal muscle | .e | 24 to 571 | 2 to 549 | capped | 548/548 (100 %) | 3 diff (99.5 %id) | ||
DA896931 | skeletal muscle | .e | 34 to 572 | 2 to 541 | capped | 540/540 (100 %) | 5 diff (99.1 %id) | ||
DA900012 | skeletal muscle | .e | 22 to 572 | 2 to 552 | capped | 551/551 (100 %) | 1 diff (99.9 %id) | ||
DA900052 | skeletal muscle | .m | 449 to 1005 | 2 to 558 | tiling clone, capped | 557/557 (100 %) | 1 diff (99.9 %id) | ||
DA915885 | small intestine | .e | 24 to 540 | 2 to 518 | capped | 517/517 (100 %) | 1 diff (99.9 %id) | ||
BP337291 | coronary artery | .e | 25 to 618 | 1 to 594 | 594/594 (100 %) | 2 diff (99.7 %id) | |||
BP339525 | Spleen | .e | 3 to 581 | 1 to 579 | 579/579 (100 %) | 2 diff (99.7 %id) | |||
BP339935 | Spleen | .e | 33 to 614 | 1 to 582 | 582/582 (100 %) | 6 diff (99.0 %id) | |||
DA965671 | stomach | .vh | 1 to 565 | 2 to 566 | tiling clone, capped | 565/565 (100 %) | 1 diff (99.9 %id) | ||
BP349647 | brain | .g | 1 to 583 | 1 to 583 | tiling clone, | 583/583 (100 %) | 1 diff (99.9 %id) | ||
BP354579 | .e | 23 to 587 | 1 to 566 | 566/582 (97 %) | 4 diff (99.4 %id) | ||||
BP354616 | .e | 23 to 587 | 1 to 565 | 565/577 (97 %) | 19 diff (96.8 %id) | ||||
DB034824 | testis | .vd | 49 to 598 | 2 to 551 | capped | 550/550 (100 %) | 1 diff (99.9 %id) | ||
DB337339 | testis | .vd | 1187 to 1725 | 539 to 1 | 539/539 (100 %) | 0 diff (100 %id) | |||
DB058534 | testis | .b | 1 to 398 | 2 to 399 | tiling clone, capped | 398/398 (100 %) | 1 diff (99.8 %id) | ||
BP360163 | thalamus | .f | 1 to 582 | 1 to 582 | tiling clone, | 582/582 (100 %) | 2 diff (99.7 %id) | ||
BP360196 | thalamus | .f | 1 to 580 | 1 to 580 | 580/580 (100 %) | 4 diff (99.4 %id) | |||
DB100847 | thymus | .g | 2 to 680 | 2 to 680 | tiling clone, to resequence, capped | 679/679 (100 %) | 3 diff (99.6 %id) | ||
DB342046 | thymus | .g | 1305 to 1799 | 496 to 1 | tiling clone, to resequence, | 496/511 (97 %) | 21 diff (95.9 %id) | ||
DB109856 | thymus | .e | 34 to 608 | 2 to 578 | capped | 577/577 (100 %) | 3 diff (99.5 %id) | ||
TI_149313527 | .b | 1807 to 2551 | 832 to 93 | AAA | 740/904 (81 %) | 8 diff (99.2 %id) | |||
TI_154184408 | .o | 1215 to 1877 | 106 to 768 | 663/702 (94 %) | 10 diff (98.6 %id) | ||||
TI_154193538 | .e | 19 to 906 | 51 to 933 | 881/1023 (86 %) | 18 diff (98.3 %id) | ||||
BP368900 | testis | .e | 1 to 558 | 1 to 558 | tiling clone, | 558/558 (100 %) | 1 diff (99.9 %id) | ||
BP370815 | testis | .e | 9 to 559 | 1 to 551 | 551/551 (100 %) | 2 diff (99.7 %id) | |||
CB305423 | lung, Primary Lung Cystic Fibrosis EpithelialCells | .b | 1828 to 2551 | 736 to 17 | AAA | 720/721 (99 %) | 4 diff (99.5 %id) | ||
CB240971 | Human Lung Epithelial cells, lung | .b | 1815 to 2551 | 753 to 17 | AAA | 737/737 (100 %) | 0 diff (100 %id) | ||
BM670306 | eye, lens | .b | 2225 to 2551 | 346 to 19 | fully sequenced, AAA | 328/328 (100 %) | 2 diff (99.4 %id) | ||
BM712032 | eye, lens | .b | 1831 to 2286 | 1 to 456 | fully sequenced, | 456/456 (100 %) | 2 diff (99.6 %id) | ||
BM675431 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 2011 to 2551 | 559 to 19 | fully sequenced, AAA | 541/541 (100 %) | 2 diff (99.7 %id) | ||
BM714928 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 1637 to 2072 | 1 to 437 | fully sequenced, | 437/437 (100 %) | 1 diff (99.8 %id) | ||
BU631064 | cell lines, Chondrosarcoma | .o | 1312 to 1890 | 598 to 19 | tiling clone, AAA | 580/580 (100 %) | 2 diff (99.7 %id) | ||
CA426522 | cell lines, Chondrosarcoma | .b | 1859 to 2551 | 725 to 33 | AAA | 693/695 (99 %) | 0 diff (100 %id) | ||
BU625249 | cell lines, Enchondroma | .c | 1512 to 1788 | 295 to 19 | AAA | 277/286 (96 %) | 0 diff (100 %id) | ||
CA430566 | Cell Line, Chondrosarcoma | .b | 1881 to 2551 | 685 to 17 | AAA | 669/669 (100 %) | 2 diff (99.8 %id) | ||
BU622178 | Cell Line, Chondrosarcoma | .b | 1859 to 2551 | 708 to 17 | AAA | 692/692 (100 %) | 1 diff (99.9 %id) | ||
BU633849 | cell lines, Chondrosarcoma | .u | 1 to 649 | 667 to 19 | exact | tiling clone, AAA | 649/650 (99 %) | 0 diff (100 %id) | |
CD368831 | Alveolar Macrophage, lung | .b | 1878 to 2551 | 690 to 17 | AAA | 674/674 (100 %) | 0 diff (100 %id) | ||
DB263753 | uterus | .i | 1 to 593 | 2 to 594 | tiling clone, capped | 593/593 (100 %) | 0 diff (100 %id) | ||
BP378375 | uterus | .e | 23 to 592 | 1 to 571 | 571/580 (98 %) | 8 diff (98.7 %id) | |||
U25751 | normal breast, pooled | .e | 41 to 884 | 1 to 846 | This clone was ignored | 846/993 (85 %) | 6 diff (99.4 %id) | ||
BF842289 | head_neck | .e | 41 to 884 | 1 to 846 | 846/993 (85 %) | 6 diff (99.4 %id) | |||
CN258732 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .c | 1224 to 1787 | 564 to 1 | This clone was ignored | 564/564 (100 %) | 0 diff (100 %id) | ||
AW196382 | pooled germ cell tumors | .c | 1224 to 1787 | 564 to 1 | Suspected internal deletion, this clone was ignored | 564/564 (100 %) | 0 diff (100 %id) | ||
BF510848 | .k | 1 to 579 | 1 to 579 | tiling clone, AAA | This clone was ignored | 579/579 (100 %) | 7 diff (98.8 %id) | ||
BF308215 | muscle, rhabdomyosarcoma | .k | 1 to 579 | 1 to 579 | tiling clone, | Suspected internal deletion, this clone was ignored | 579/579 (100 %) | 7 diff (98.8 %id) | |
BG236409 | blood, lymphocyte | .k | 53 to 594 | 1 to 542 | This clone was ignored | 542/542 (100 %) | 2 diff (99.7 %id) | ||
BG027478 | Bone, osteosarcoma, cell line | .k | 53 to 594 | 1 to 542 | This clone was ignored | 542/542 (100 %) | 2 diff (99.7 %id) | ||
DA694412 | .b | 1482 to 2182 | 1 to 701 | This clone was ignored | 701/702 (99 %) | 3 diff (99.6 %id) | |||
DB323226 | .b | 1482 to 2182 | 1 to 701 | This clone was ignored | 701/702 (99 %) | 3 diff (99.6 %id) | |||
DB249068 | uterus | .vf | 1 to 726 | 1 to 725 | tiling clone, capped | This clone was ignored | 725/725 (100 %) | 3 diff (99.6 %id) | |
CX759270 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .vf | 1 to 726 | 1 to 725 | exact | tiling clone, | Submitted on the opposite strand | 725/725 (100 %) | 3 diff (99.6 %id) |
DR157982 | human embryonic stem cells differentiated toan early endodermal cell type | .e | 41 to 571 | 1 to 531 | 531/531 (100 %) | 1 diff (99.9 %id) | |||
CF272471 | Brain glioblastoma | .e | 20 to 832 | 1 to 821 | 821/881 (93 %) | 11 diff (98.8 %id) | |||
CF127852 | Chondrosarcoma Lung Metastasis cell lines, lung | .e | 19 to 789 | 1 to 772 | 770/772 (99 %) | 5 diff (99.4 %id) | |||
CF127852 | Chondrosarcoma Lung Metastasis cell lines, lung | .e | 19 to 789 | 1 to 772 | 770/772 (99 %) | 5 diff (99.4 %id) | |||
TI_57216895 | .e | 36 to 835 | 22 to 835 | AAA | 821/1052 (78 %) | 22 diff (98.0 %id) | |||
TI_57173006 | .e | 42 to 792 | 68 to 821 | 752/822 (91 %) | 20 diff (97.6 %id) | ||||
TI_57173227 | .b | 1287 to 1996 | 66 to 777 | 772/777 (99 %) | 57 diff (92.7 %id) | ||||
TI_57174120 | .b | 1287 to 1884 | 67 to 664 | 658/664 (99 %) | 55 diff (91.8 %id) | ||||
TI_57244806 | .vc | 1 to 748 | 40 to 788 | exact | 749/788 (95 %) | 9 diff (98.9 %id) | |||
TI_44342842 | .e | 23 to 872 | 87 to 938 | 852/944 (90 %) | 25 diff (97.4 %id) | ||||
CB114358 | Liver | .b | 1725 to 2198 | 1 to 474 | 474/474 (100 %) | 5 diff (99.0 %id) | |||
T27188 | .o | 650 to 825 | 1 to 176 | 176/176 (100 %) | 1 diff (99.5 %id) | ||||
T27189 | .b | 1579 to 1636 | 1 to 58 | 58/58 (100 %) | 1 diff (98.3 %id) | ||||
NM_025267.3 | .c | 1 to 1788 | 1 to 1788 | exact | RefSeq, AAA | 1788/1788 (100 %) | 0 diff (100 %id) | ||
NM_001136042.2 | .b | 380 to 2551 | 1 to 2172 | exact | RefSeq, AAA | 2172/2172 (100 %) | 0 diff (100 %id) | ||
NM_001142653.1 | .m | 1 to 1905 | 1 to 1905 | exact | RefSeq, AAA | 1905/1905 (100 %) | 0 diff (100 %id) | ||
NM_001142654.1 | .o | 1 to 1890 | 1 to 1890 | exact | RefSeq, AAA | 1890/1890 (100 %) | 0 diff (100 %id) | ||
DA781598 | brain | .e | 22 to 572 | 2 to 555 | capped | 554/554 (100 %) | 4 diff (99.3 %id) | ||
DA808187 | brain | .vg-u | 1 to 578 | 2 to 573 | L10S S12L G13I I15S L16F ... | tiling clone, capped | 572/572 (100 %) | 4 diff (99.4 %id) | |
DA808334 | brain | .vg-u | 1 to 571 | 2 to 566 | L10S S12L G13I I15S L16F ... | capped | 565/565 (100 %) | 4 diff (99.3 %id) | |
D20015 | .vi | 5 to 539 | 1 to 542 | A37G V38R R40S A41G R42Q ... | tiling clone, | Submitted on the opposite strand | 542/543 (99 %) | 14 diff (97.5 %id) | |
BM767505 | Ascites, stomach | .s | 421 to 981 | 1 to 561 | tiling clone, | 561/561 (100 %) | 0 diff (100 %id) | ||
BM767505 | Ascites, stomach | .s | 421 to 981 | 1 to 561 | tiling clone, | 561/561 (100 %) | 0 diff (100 %id) | ||
BM834957 | stomach | .h | 684 to 1104 | 1 to 421 | tiling clone, | 421/421 (100 %) | 3 diff (99.3 %id) | ||
BQ083455 | stomach | .e | 23 to 263 | 1 to 241 | 241/241 (100 %) | 3 diff (98.8 %id) | |||
BM795647 | stomach | .b | 1840 to 2175 | 17 to 355 | 339/339 (100 %) | 4 diff (98.9 %id) | |||
BM817594 | stomach | .b | 1840 to 2351 | 17 to 531 | 515/515 (100 %) | 4 diff (99.3 %id) | |||
BM827274 | Ascites, stomach | .b | 1642 to 2241 | 1 to 600 | 600/600 (100 %) | 0 diff (100 %id) | |||
BM827274 | Ascites, stomach | .b | 1642 to 2241 | 1 to 600 | 600/600 (100 %) | 0 diff (100 %id) | |||
F31194 | pectoral muscle (after mastectomy) | .c | 1432 to 1649 | 1 to 217 | 216/217 (99 %) | 5 diff (97.7 %id) | |||
TI_1948085771 | .b | 903 to 1722 | 126 to 942 | fully sequenced, | 817/942 (86 %) | 24 diff (97.5 %id) | |||
TI_1948085772 | .b | 1692 to 2486 | 920 to 121 | fully sequenced, | 800/920 (86 %) | 9 diff (99.1 %id) | |||
TI_1948085916 | .b | 903 to 1648 | 126 to 869 | 744/1406 (52 %) | 15 diff (99.0 %id) | ||||
TI_1948085917 | .b | 1668 to 2485 | 940 to 122 | 819/1313 (62 %) | 7 diff (99.5 %id) | ||||
TI_1948086080 | .b | 903 to 1579 | 123 to 801 | 679/1485 (45 %) | 13 diff (99.2 %id) | ||||
TI_1948086081 | .b | 1575 to 2485 | 1036 to 125 | 912/1296 (70 %) | 14 diff (99.0 %id) | ||||
TI_1948086235 | .b | 903 to 1579 | 126 to 804 | 679/1487 (45 %) | 12 diff (99.2 %id) | ||||
DA893270 | skeletal muscle | .o | 452 to 901 | 8 to 457 | tiling clone, capped | 450/450 (100 %) | 1 diff (99.8 %id) | ||
DB330888 | skeletal muscle | .o | 1342 to 1876 | 535 to 1 | 535/535 (100 %) | 0 diff (100 %id) | |||
DA896440 | skeletal muscle | .e | 24 to 571 | 2 to 549 | capped | 548/548 (100 %) | 3 diff (99.5 %id) | ||
DA896931 | skeletal muscle | .e | 34 to 572 | 2 to 541 | capped | 540/540 (100 %) | 5 diff (99.1 %id) | ||
DA900012 | skeletal muscle | .e | 22 to 572 | 2 to 552 | capped | 551/551 (100 %) | 1 diff (99.9 %id) | ||
DA900052 | skeletal muscle | .m | 449 to 1005 | 2 to 558 | tiling clone, capped | 557/557 (100 %) | 1 diff (99.9 %id) | ||
DA915885 | small intestine | .e | 24 to 540 | 2 to 518 | capped | 517/517 (100 %) | 1 diff (99.9 %id) | ||
BP337291 | coronary artery | .e | 25 to 618 | 1 to 594 | 594/594 (100 %) | 2 diff (99.7 %id) | |||
BP339525 | Spleen | .e | 3 to 581 | 1 to 579 | 579/579 (100 %) | 2 diff (99.7 %id) | |||
BP339935 | Spleen | .e | 33 to 614 | 1 to 582 | 582/582 (100 %) | 6 diff (99.0 %id) | |||
DA965671 | stomach | .vh | 1 to 565 | 2 to 566 | tiling clone, capped | 565/565 (100 %) | 1 diff (99.9 %id) | ||
BP349647 | brain | .g | 1 to 583 | 1 to 583 | tiling clone, | 583/583 (100 %) | 1 diff (99.9 %id) | ||
BP354579 | .e | 23 to 587 | 1 to 566 | 566/582 (97 %) | 4 diff (99.4 %id) | ||||
BP354616 | .e | 23 to 587 | 1 to 565 | 565/577 (97 %) | 19 diff (96.8 %id) | ||||
DB034824 | testis | .vd | 49 to 598 | 2 to 551 | capped | 550/550 (100 %) | 1 diff (99.9 %id) | ||
DB337339 | testis | .vd | 1187 to 1725 | 539 to 1 | 539/539 (100 %) | 0 diff (100 %id) | |||
DB058534 | testis | .b | 1 to 398 | 2 to 399 | tiling clone, capped | 398/398 (100 %) | 1 diff (99.8 %id) | ||
BP360163 | thalamus | .f | 1 to 582 | 1 to 582 | tiling clone, | 582/582 (100 %) | 2 diff (99.7 %id) | ||
BP360196 | thalamus | .f | 1 to 580 | 1 to 580 | 580/580 (100 %) | 4 diff (99.4 %id) | |||
DB100847 | thymus | .g | 2 to 680 | 2 to 680 | tiling clone, to resequence, capped | 679/679 (100 %) | 3 diff (99.6 %id) | ||
DB342046 | thymus | .g | 1305 to 1799 | 496 to 1 | tiling clone, to resequence, | 496/511 (97 %) | 21 diff (95.9 %id) | ||
DB109856 | thymus | .e | 34 to 608 | 2 to 578 | capped | 577/577 (100 %) | 3 diff (99.5 %id) | ||
TI_149313527 | .b | 1807 to 2551 | 832 to 93 | AAA | 740/904 (81 %) | 8 diff (99.2 %id) | |||
TI_154184408 | .o | 1215 to 1877 | 106 to 768 | 663/702 (94 %) | 10 diff (98.6 %id) | ||||
TI_154193538 | .e | 19 to 906 | 51 to 933 | 881/1023 (86 %) | 18 diff (98.3 %id) | ||||
BP368900 | testis | .e | 1 to 558 | 1 to 558 | tiling clone, | 558/558 (100 %) | 1 diff (99.9 %id) | ||
BP370815 | testis | .e | 9 to 559 | 1 to 551 | 551/551 (100 %) | 2 diff (99.7 %id) | |||
CB305423 | lung, Primary Lung Cystic Fibrosis EpithelialCells | .b | 1828 to 2551 | 736 to 17 | AAA | 720/721 (99 %) | 4 diff (99.5 %id) | ||
CB305423 | lung, Primary Lung Cystic Fibrosis EpithelialCells | .b | 1828 to 2551 | 736 to 17 | AAA | 720/721 (99 %) | 4 diff (99.5 %id) | ||
CB240971 | Human Lung Epithelial cells, lung | .b | 1815 to 2551 | 753 to 17 | AAA | 737/737 (100 %) | 0 diff (100 %id) | ||
CB240971 | Human Lung Epithelial cells, lung | .b | 1815 to 2551 | 753 to 17 | AAA | 737/737 (100 %) | 0 diff (100 %id) | ||
BM670306 | eye, lens | .b | 2225 to 2551 | 346 to 19 | fully sequenced, AAA | 328/328 (100 %) | 2 diff (99.4 %id) | ||
BM670306 | eye, lens | .b | 2225 to 2551 | 346 to 19 | fully sequenced, AAA | 328/328 (100 %) | 2 diff (99.4 %id) | ||
BM712032 | eye, lens | .b | 1831 to 2286 | 1 to 456 | fully sequenced, | 456/456 (100 %) | 2 diff (99.6 %id) | ||
BM712032 | eye, lens | .b | 1831 to 2286 | 1 to 456 | fully sequenced, | 456/456 (100 %) | 2 diff (99.6 %id) | ||
BM675431 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 2011 to 2551 | 559 to 19 | fully sequenced, AAA | 541/541 (100 %) | 2 diff (99.7 %id) | ||
BM675431 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 2011 to 2551 | 559 to 19 | fully sequenced, AAA | 541/541 (100 %) | 2 diff (99.7 %id) | ||
BM714928 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 1637 to 2072 | 1 to 437 | fully sequenced, | 437/437 (100 %) | 1 diff (99.8 %id) | ||
BM714928 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 1637 to 2072 | 1 to 437 | fully sequenced, | 437/437 (100 %) | 1 diff (99.8 %id) | ||
BU631064 | cell lines, Chondrosarcoma | .o | 1312 to 1890 | 598 to 19 | tiling clone, AAA | 580/580 (100 %) | 2 diff (99.7 %id) | ||
BU631064 | cell lines, Chondrosarcoma | .o | 1312 to 1890 | 598 to 19 | tiling clone, AAA | 580/580 (100 %) | 2 diff (99.7 %id) | ||
CA426522 | cell lines, Chondrosarcoma | .b | 1859 to 2551 | 725 to 33 | AAA | 693/695 (99 %) | 0 diff (100 %id) | ||
CA426522 | cell lines, Chondrosarcoma | .b | 1859 to 2551 | 725 to 33 | AAA | 693/695 (99 %) | 0 diff (100 %id) | ||
BU625249 | cell lines, Enchondroma | .c | 1512 to 1788 | 295 to 19 | AAA | 277/286 (96 %) | 0 diff (100 %id) | ||
BU625249 | cell lines, Enchondroma | .c | 1512 to 1788 | 295 to 19 | AAA | 277/286 (96 %) | 0 diff (100 %id) | ||
CA430566 | Cell Line, Chondrosarcoma | .b | 1881 to 2551 | 685 to 17 | AAA | 669/669 (100 %) | 2 diff (99.8 %id) | ||
CA430566 | Cell Line, Chondrosarcoma | .b | 1881 to 2551 | 685 to 17 | AAA | 669/669 (100 %) | 2 diff (99.8 %id) | ||
BU622178 | Cell Line, Chondrosarcoma | .b | 1859 to 2551 | 708 to 17 | AAA | 692/692 (100 %) | 1 diff (99.9 %id) | ||
BU622178 | Cell Line, Chondrosarcoma | .b | 1859 to 2551 | 708 to 17 | AAA | 692/692 (100 %) | 1 diff (99.9 %id) | ||
BU633849 | cell lines, Chondrosarcoma | .u | 1 to 649 | 667 to 19 | exact | tiling clone, AAA | 649/650 (99 %) | 0 diff (100 %id) | |
BU633849 | cell lines, Chondrosarcoma | .u | 1 to 649 | 667 to 19 | exact | tiling clone, AAA | 649/650 (99 %) | 0 diff (100 %id) | |
CD368831 | Alveolar Macrophage, lung | .b | 1878 to 2551 | 690 to 17 | AAA | 674/674 (100 %) | 0 diff (100 %id) | ||
CD368831 | Alveolar Macrophage, lung | .b | 1878 to 2551 | 690 to 17 | AAA | 674/674 (100 %) | 0 diff (100 %id) | ||
DB263753 | uterus | .i | 1 to 593 | 2 to 594 | tiling clone, capped | 593/593 (100 %) | 0 diff (100 %id) | ||
BP378375 | uterus | .e | 23 to 592 | 1 to 571 | 571/580 (98 %) | 8 diff (98.7 %id) |
? | Gene Summary | Gene on genome | mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg-u, .vh, .vi, .vj, .vk | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes C |