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Gene AANATTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
42 supporting clones for gene AANAT back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BU845764 ovary, teratocarcinoma, cell line .a 1 to 900 1 to 907   tiling clone,   907/912
(99 %)
17 diff
(98.2 %id)
BU931661 ovary, teratocarcinoma, cell line .a 1 to 827 1 to 839   tiling clone,   839/909
(92 %)
31 diff
(96.6 %id)
AA084486 pineal gland .a 855 to 1287 1 to 430   tiling clone,   430/430
(100 %)
5 diff
(98.9 %id)
NM_001088.2   .a 855 to 1879 1 to 1025   RefSeq, AAA   1025/1025
(100 %)
0 diff
(100 %id)
U40347   .a 876 to 1879 1 to 1004   tiling clone, AAA   1004/1004
(100 %)
1 diff
(100.0 %id)
BC069434 PCR rescued clones .a 912 to 1837 1 to 926   tiling clone, available from MGC,   926/926
(100 %)
0 diff
(100 %id)
BQ637944 eye, retina .a 918 to 1528 1 to 611       611/611
(100 %)
0 diff
(100 %id)
BG395984 eye, retinoblastoma .a 963 to 1796 1 to 887       781/921
(84 %)
90 diff
(90.3 %id)
TI_1520874741   .a 1022 to 1760 63 to 801     Submitted on the opposite strand 739/1267
(58 %)
7 diff
(99.5 %id)
TI_1520875305   .a 1022 to 1760 63 to 801     Submitted on the opposite strand 739/1184
(62 %)
7 diff
(99.5 %id)
TI_1520875831   .a 1022 to 1760 127 to 866     Submitted on the opposite strand 740/1163
(63 %)
9 diff
(99.3 %id)
TI_1520874743   .a 1022 to 1765 60 to 804     Submitted on the opposite strand 745/1121
(66 %)
8 diff
(99.3 %id)
TI_1520875299   .a 1022 to 1772 804 to 54     Submitted on the opposite strand 751/1342
(55 %)
1 diff
(100.0 %id)
BC126332 Brain, cerebellum, PCR rescued clones .a 1025 to 1751 1 to 727       727/727
(100 %)
0 diff
(100 %id)
BC126334 Brain, cerebellum, PCR rescued clones .a 1025 to 1764 1 to 740       740/740
(100 %)
0 diff
(100 %id)
BX281912 2 pooled tumors (clear cell type), Kidney .b 1 to 478 1 to 478   tiling clone,   478/478
(100 %)
0 diff
(100 %id)
TI_151744004   .b 14 to 903 906 to 26   tiling clone, AAA   881/1023
(86 %)
22 diff
(97.9 %id)
TI_1948227529   .b 136 to 760 758 to 126       633/1250
(50 %)
26 diff
(98.0 %id)
EL736249 mixed .b 138 to 757 1 to 620       620/620
(100 %)
0 diff
(100 %id)
TI_1948227527   .b 138 to 757 149 to 773       625/1420
(44 %)
37 diff
(97.4 %id)
TI_1948227824   .b 138 to 748 127 to 737       611/1327
(46 %)
28 diff
(97.9 %id)
TI_1948228115   .b 138 to 748 127 to 740       614/1427
(43 %)
34 diff
(97.7 %id)
AI819939 2 pooled tumors (clear cell type), Kidney .b 158 to 908 755 to 6   tiling clone,   750/761
(98 %)
18 diff
(97.7 %id)
AA365330 pineal body .b 246 to 539 1 to 295       295/305
(96 %)
5 diff
(98.4 %id)
AW951264   .b 247 to 757 1 to 512       512/512
(100 %)
33 diff
(93.6 %id)
AA722177 pineal gland .b 324 to 903 583 to 7       577/583
(98 %)
7 diff
(98.8 %id)
TI_1948228117   .b 411 to 760 478 to 129       350/379
(92 %)
0 diff
(100 %id)
TI_1948227826   .b 428 to 760 460 to 128       333/360
(92 %)
0 diff
(100 %id)
TI_1520876395   .b 462 to 788 10 to 335       326/800
(40 %)
4 diff
(99.5 %id)
TI_1520876337   .b 465 to 788 13 to 335       323/1199
(26 %)
2 diff
(99.9 %id)
AA757429 pineal gland .b 465 to 905 446 to 15   AAA   432/492
(87 %)
24 diff
(95.2 %id)
BM711585 eye, human retina .b 687 to 912 1 to 226   AAA   226/226
(100 %)
4 diff
(98.3 %id)
BC092430 testis .c 1 to 1912 1 to 1912 exact tiling clone, AAA   1912/1912
(100 %)
1 diff
(100.0 %id)
CD243881 testis .c 1 to 765 8 to 780       773/925
(83 %)
18 diff
(98.1 %id)
NM_001166579.1   .c 1 to 1912 1 to 1912 exact RefSeq, AAA   1912/1912
(100 %)
0 diff
(100 %id)
AA364412 pineal body .c 1170 to 1429 12 to 269       258/269
(95 %)
7 diff
(97.4 %id)
TI_2194628921   .d 1 to 799 47 to 845 exact tiling clone,   799/1285
(62 %)
8 diff
(99.4 %id)
TI_2194629300   .d 1 to 799 868 to 70 exact     799/1269
(62 %)
1 diff
(100.0 %id)
TI_2194631108   .d 1 to 799 52 to 850 exact     799/1339
(59 %)
7 diff
(99.5 %id)
BC143989 Brain, cerebellum, PCR rescued clones .d 4 to 799 1 to 796 exact     796/796
(100 %)
0 diff
(100 %id)
TI_2194631109   .d 11 to 799 865 to 78 exact     788/1035
(76 %)
2 diff
(99.9 %id)
AY055827   .e 1 to 235 1 to 235 exact tiling clone,   235/235
(100 %)
1 diff
(99.6 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI