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Gene AAASTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
582 supporting clones for gene AAAS back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_015665.5   .a 1 to 1836 1 to 1836 exact RefSeq, AAA   1836/1836
(100 %)
0 diff
(100 %id)
CB151883 cervix, Uterine .a 7 to 642 1 to 636   tiling clone,   636/636
(100 %)
1 diff
(99.9 %id)
DC340126 thalamus .a 11 to 639 1 to 629       629/629
(100 %)
0 diff
(100 %id)
CB123646 Liver .a 19 to 629 1 to 611       611/611
(100 %)
0 diff
(100 %id)
CB152033 brain .a 21 to 637 1 to 617       617/617
(100 %)
2 diff
(99.7 %id)
CD048156 embryonic stem cells, WA01, passage 38 .a 25 to 841 10 to 844       846/848
(99 %)
63 diff
(92.6 %id)
CD386780 embryonic trophoblasts, made from WA01 stemcells .a 25 to 786 16 to 794       791/921
(85 %)
62 diff
(93.3 %id)
TI_44169260   .a 28 to 833 119 to 923       805/1000
(80 %)
12 diff
(98.8 %id)
CX163766 human embryonic stem cells differentiated toan early endodermal cell type .a 31 to 887 21 to 877       858/877
(97 %)
7 diff
(99.3 %id)
TI_57165745   .a 31 to 690 27 to 698       670/897
(74 %)
37 diff
(95.9 %id)
CR619164 B cells (Ramos cell line) Cot 25-normalized .a 32 to 1802 1 to 1771       1771/1771
(100 %)
0 diff
(100 %id)
AL583327 B cells from Burkitt lymphoma .a 32 to 940 1 to 908       908/943
(96 %)
19 diff
(98.0 %id)
BE274089 Kidney, renal cell adenocarcinoma .a 33 to 708 27 to 699       673/725
(92 %)
12 diff
(98.4 %id)
BU507130 leiomyosarcoma, uterus .a 34 to 924 1 to 894       894/894
(100 %)
3 diff
(99.7 %id)
BM452248 melanotic melanoma, skin .a 36 to 708 10 to 683       674/1050
(64 %)
10 diff
(99.1 %id)
BX374566 Neuroblastoma Cot 10-normalized .a 37 to 759 1 to 723       723/723
(100 %)
1 diff
(99.9 %id)
BP224945   .a 37 to 618 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP366407 thymus .a 37 to 617 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP367747 thymus .a 37 to 615 1 to 579       579/579
(100 %)
0 diff
(100 %id)
BC000659 Kidney, renal cell adenocarcinoma .a 39 to 1836 1 to 1798 exact tiling clone, available from MGC, AAA   1798/1798
(100 %)
1 diff
(100.0 %id)
BC018836.
matches multiple genes
Kidney, Kidney, renal cell adenocarcinoma, renal cell adenocarcinoma .a 39 to 1836 1 to 1798   available from MGC, AAA also hits gene C16orf57 1798/1798
(100 %)
1 diff
(100.0 %id)
TI_154172114   .a 39 to 685 89 to 739       651/1373
(47 %)
19 diff
(98.7 %id)
CD705265 normal nasopharynx .a 40 to 640 16 to 616       601/616
(97 %)
6 diff
(99.1 %id)
BI093506 cervix .a 40 to 871 1 to 832       832/833
(99 %)
11 diff
(98.7 %id)
BI765880 pooled colon, kidney, stomach .a 40 to 884 1 to 843       843/844
(99 %)
12 diff
(98.6 %id)
BI837532 pooled pancreas and spleen .a 40 to 690 1 to 663       662/862
(76 %)
43 diff
(95.1 %id)
BI919188 brain .a 40 to 724 1 to 685       685/688
(99 %)
5 diff
(99.3 %id)
TI_57148942   .a 40 to 884 1 to 843       843/844
(99 %)
12 diff
(98.6 %id)
TI_57239521   .a 40 to 724 1 to 685       685/688
(99 %)
5 diff
(99.3 %id)
CB137689 Liver .a 43 to 634 1 to 592       592/592
(100 %)
0 diff
(100 %id)
BM743095 stomach .a 43 to 665 1 to 623       623/623
(100 %)
0 diff
(100 %id)
BM743124 stomach .a 43 to 673 1 to 631       631/631
(100 %)
1 diff
(99.9 %id)
BM743394 stomach .a 43 to 653 1 to 611       611/611
(100 %)
0 diff
(100 %id)
BM743438 stomach .a 44 to 670 1 to 626       626/626
(100 %)
4 diff
(99.4 %id)
DA003517   .a 48 to 618 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
CR590678 neuroblastoma .a 48 to 1818 1 to 1771 exact     1771/1771
(100 %)
0 diff
(100 %id)
AL515777 brain, neuroblastoma, neuroblastoma cells .a 48 to 1004 1 to 951   fully sequenced,   951/951
(100 %)
3 diff
(99.7 %id)
DB252097 uterus .a 48 to 634 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
BM458624 lymph, lymphoma, cell line .a 50 to 982 1 to 946       945/1030
(91 %)
28 diff
(97.3 %id)
CR595976 Neuroblastoma Cot 25-normalized .a 51 to 1804 1 to 1754 exact     1754/1754
(100 %)
0 diff
(100 %id)
AL525649 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 51 to 928 1 to 877   fully sequenced,   877/877
(100 %)
1 diff
(99.9 %id)
BI489869 pooled brain, lung, testis .a 51 to 673 1 to 623       623/623
(100 %)
4 diff
(99.4 %id)
BI918846 brain .a 51 to 836 34 to 832       799/835
(95 %)
29 diff
(96.6 %id)
BU153912 eye, retinoblastoma .a 51 to 925 1 to 877       877/878
(99 %)
7 diff
(99.3 %id)
TI_43960517   .a 51 to 673 65 to 687       623/687
(90 %)
9 diff
(98.7 %id)
TI_57240612   .a 51 to 836 34 to 832       799/835
(95 %)
29 diff
(96.6 %id)
BI766520 pooled lung and spleen .a 52 to 925 1 to 882       882/891
(98 %)
32 diff
(96.5 %id)
BU189192 melanotic melanoma, skin .a 52 to 797 1 to 752       752/878
(85 %)
13 diff
(98.6 %id)
BI196372 brain, neuroblastoma .a 53 to 826 1 to 773       773/773
(100 %)
11 diff
(98.6 %id)
BI911258 leukocyte .a 53 to 723 1 to 671       671/671
(100 %)
3 diff
(99.6 %id)
TI_57177476   .a 53 to 925 27 to 907       881/916
(96 %)
36 diff
(96.1 %id)
TI_57232052   .a 53 to 723 1 to 671       671/671
(100 %)
3 diff
(99.6 %id)
BX406608 fetal liver, Liver .a 55 to 910 1 to 856       856/856
(100 %)
7 diff
(99.2 %id)
BI917925 brain .a 55 to 873 1 to 823       823/823
(100 %)
17 diff
(98.0 %id)
TI_57242520   .a 55 to 873 70 to 892       823/892
(92 %)
23 diff
(97.5 %id)
CR593907 fetal brain .a 56 to 1811 1 to 1756 exact     1756/1756
(100 %)
0 diff
(100 %id)
CR601632 Neuroblastoma Cot 25-normalized .a 56 to 1802 1 to 1747       1747/1747
(100 %)
0 diff
(100 %id)
CR616332 neuroblastoma .a 56 to 1816 1 to 1761 exact     1761/1761
(100 %)
0 diff
(100 %id)
BG258381 embryonal carcinoma, cell line, testis .a 58 to 664 1 to 607       607/676
(89 %)
16 diff
(97.7 %id)
DR155967 human embryonic stem cells differentiated toan early endodermal cell type .a 60 to 801 1 to 742       742/742
(100 %)
0 diff
(100 %id)
BU172027 melanotic melanoma, skin .a 61 to 913 1 to 856       856/856
(100 %)
4 diff
(99.6 %id)
BI825159 brain, medulla .a 62 to 749 1 to 687       687/687
(100 %)
1 diff
(99.9 %id)
BM925751 brain .a 62 to 1015 1 to 959       956/1039
(92 %)
13 diff
(98.8 %id)
TI_57170206   .a 62 to 749 64 to 750       687/750
(91 %)
7 diff
(99.1 %id)
BQ421099 large cell carcinoma, lung .a 63 to 940 1 to 885       885/895
(98 %)
12 diff
(98.7 %id)
BQ878499 dorsal root ganglia .a 63 to 947 1 to 894       894/895
(99 %)
15 diff
(98.4 %id)
BQ929947 leiomyosarcoma, uterus .a 63 to 904 1 to 843       843/843
(100 %)
6 diff
(99.3 %id)
BP198338 adrenal gland .a 67 to 648 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA929043 small intestine .a 67 to 629 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA090449 cerebellum .a 68 to 641 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA139325 alzheimer cortex .a 68 to 683 2 to 617   capped   616/616
(100 %)
1 diff
(99.9 %id)
BG615193 embryonal carcinoma, testis .a 68 to 790 1 to 735       731/735
(99 %)
32 diff
(95.7 %id)
BQ054878 lymph, lymphoma, cell line .a 68 to 859 1 to 807       807/1149
(70 %)
23 diff
(98.0 %id)
DA906190   .a 68 to 626 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA906192   .a 68 to 626 2 to 562   capped   561/561
(100 %)
3 diff
(99.5 %id)
DA948272 Spleen .a 68 to 635 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DB044903 testis .a 68 to 629 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA007657   .a 69 to 620 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
CD247009 embryonic stem cells, WA01, passage 38 .a 69 to 773 24 to 733       710/952
(74 %)
15 diff
(98.5 %id)
BP234298 coronary artery .a 69 to 652 1 to 581       581/581
(100 %)
14 diff
(97.6 %id)
BM743033 stomach .a 69 to 704 1 to 636       636/636
(100 %)
0 diff
(100 %id)
BM784173 stomach .a 69 to 767 1 to 699       699/699
(100 %)
0 diff
(100 %id)
DB009910 colon, tumor tissue .a 69 to 635 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA090617 cerebellum .a 70 to 633 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA132233 alzheimer cortex .a 70 to 625 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA364022 subthalamic nucleus .a 70 to 632 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
BI761621 pooled colon, kidney, stomach .a 70 to 975 1 to 901       901/909
(99 %)
16 diff
(98.3 %id)
TI_57149036   .a 70 to 975 34 to 934       901/942
(95 %)
22 diff
(97.7 %id)
DA753047   .a 70 to 629 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA846604 placenta .a 70 to 643 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
DA850068 placenta .a 70 to 617 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA967073 stomach .a 70 to 641 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB045152 testis .a 70 to 635 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BE540568 cervix .a 71 to 708 1 to 636       636/700
(90 %)
14 diff
(98.0 %id)
BE797091 lung, small cell carcinoma .a 71 to 837 1 to 766       766/768
(99 %)
6 diff
(99.3 %id)
DB052837 testis .a 72 to 639 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BP381732 adipose tissue .a 74 to 698 1 to 625       625/625
(100 %)
2 diff
(99.7 %id)
AJ289857   .a 74 to 1837 1 to 1764 exact tiling clone,   1764/1764
(100 %)
0 diff
(100 %id)
AK000833 adipose tissue .a 74 to 1836 1 to 1763 S122P R135K I479V available from FLJ, AAA   1763/1763
(100 %)
4 diff
(99.8 %id)
AK222509 adipose tissue .a 74 to 1820 1 to 1747 S122P     1747/1747
(100 %)
2 diff
(99.9 %id)
BU190246 melanotic melanoma, cell line, skin .a 74 to 852 1 to 786       786/928
(84 %)
25 diff
(97.4 %id)
BU145319 melanotic melanoma, cell line, skin .a 74 to 680 1 to 607       607/840
(72 %)
7 diff
(99.2 %id)
BQ681094 melanotic melanoma, cell line, skin .a 74 to 937 1 to 874       874/890
(98 %)
23 diff
(97.5 %id)
DA819091   .a 74 to 629 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA891525 rectum .a 74 to 653 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA980946 synovial membrane tissue from rheumatioidarthritis .a 74 to 646 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
DA982927 synovial membrane tissue from rheumatioidarthritis .a 74 to 642 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB007725 cervix, tumor tissue .a 74 to 642 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB041548 testis .a 74 to 630 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA006240   .a 75 to 642 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BI918610 brain .a 76 to 845 1 to 762       762/765
(99 %)
23 diff
(97.0 %id)
TI_57238532   .a 76 to 845 1 to 762       762/765
(99 %)
23 diff
(97.0 %id)
DA965893 stomach .a 76 to 632 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB189317 lung, tumor tissue .a 76 to 628 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA005661   .a 78 to 652 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB022264 testis .a 80 to 645 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BY796896 eye .a 81 to 748 1 to 668       668/668
(100 %)
1 diff
(99.9 %id)
TI_57175831   .a 81 to 921 61 to 901       841/901
(93 %)
11 diff
(98.8 %id)
AF226048 liver non-tumor-tissue .a 82 to 1832 1 to 1751 exact AAA   1751/1751
(100 %)
3 diff
(99.9 %id)
BG519701 brain, neuroblastoma .a 82 to 924 1 to 842       842/844
(99 %)
9 diff
(99.0 %id)
BI199098 brain, neuroblastoma .a 82 to 708 1 to 644       644/936
(68 %)
29 diff
(97.0 %id)
BI909881 leukocyte .a 82 to 956 1 to 876       876/876
(100 %)
13 diff
(98.6 %id)
TI_57237642   .a 82 to 956 37 to 912       876/912
(96 %)
19 diff
(98.0 %id)
AL515815 brain, neuroblastoma, neuroblastoma cells .a 83 to 928 26 to 871   fully sequenced,   846/871
(97 %)
6 diff
(99.4 %id)
AL525747 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 83 to 1004 26 to 943   fully sequenced,   918/943
(97 %)
8 diff
(99.2 %id)
AL534166 brain, fetal brain .a 83 to 975 26 to 919       894/1030
(86 %)
12 diff
(98.9 %id)
BQ051486 blood, natural killer cells, cell line .a 85 to 983 1 to 903       903/1052
(85 %)
17 diff
(98.4 %id)
BQ052719 blood, natural killer cells, cell line .a 85 to 982 1 to 905       905/1028
(88 %)
16 diff
(98.5 %id)
TI_57165380   .a 85 to 924 13 to 849       837/851
(98 %)
19 diff
(97.8 %id)
TI_57165453   .a 85 to 743 16 to 685       629/824
(76 %)
37 diff
(95.6 %id)
BI831564 brain, medulla .a 86 to 850 1 to 773       773/849
(91 %)
27 diff
(96.9 %id)
TI_57172227   .a 86 to 850 63 to 835       773/911
(84 %)
29 diff
(96.9 %id)
AI880283 astrocytoma, brain .a 87 to 639 1 to 553     Submitted on the opposite strand 553/553
(100 %)
2 diff
(99.7 %id)
BI829100 brain, medulla .a 89 to 921 1 to 833       833/833
(100 %)
5 diff
(99.4 %id)
BE260879 brain, neuroblastoma .a 102 to 706 1 to 608       608/624
(97 %)
10 diff
(98.4 %id)
BI838064 pooled pancreas and spleen .a 102 to 743 1 to 652       648/791
(81 %)
33 diff
(95.9 %id)
BI837680 pooled pancreas and spleen .a 102 to 924 1 to 819       819/821
(99 %)
13 diff
(98.5 %id)
BM013837 breast, mammary adenocarcinoma, cell line .a 102 to 974 16 to 893       878/930
(94 %)
20 diff
(97.9 %id)
TI_59391774   .a 102 to 974 120 to 997       878/930
(94 %)
20 diff
(97.9 %id)
BG832057 epithelioid carcinoma cell line, Pancreas .a 103 to 974 1 to 871       871/934
(93 %)
34 diff
(96.4 %id)
BE737142 adenocarcinoma, Pancreas .a 105 to 852 1 to 745       745/766
(97 %)
8 diff
(99.0 %id)
BF036962 adenocarcinoma, ovary .a 109 to 849 1 to 735       735/757
(97 %)
18 diff
(97.7 %id)
BT006912   .a 164 to 1803 1 to 1640       1640/1641
(99 %)
2 diff
(99.9 %id)
CV025525 mixed .a 164 to 821 1 to 658       658/658
(100 %)
0 diff
(100 %id)
TI_1948086258   .a 164 to 982 138 to 962       825/1362
(60 %)
25 diff
(98.2 %id)
TI_1948086424   .a 164 to 852 153 to 841       689/1396
(49 %)
6 diff
(99.6 %id)
TI_1948086599   .a 164 to 973 138 to 949       812/1305
(62 %)
10 diff
(99.3 %id)
TI_1948086771   .a 165 to 982 139 to 963       825/1426
(57 %)
20 diff
(98.6 %id)
BX392029   .a 200 to 1098 900 to 1       900/900
(100 %)
14 diff
(98.5 %id)
BU167391 eye, retinoblastoma .a 226 to 1142 42 to 967       926/968
(95 %)
20 diff
(98.0 %id)
BM461749 leiomyosarcoma, uterus .a 243 to 1092 1 to 859       859/887
(96 %)
23 diff
(97.5 %id)
CD671554 eye, Iris .a 262 to 913 1 to 652       652/652
(100 %)
0 diff
(100 %id)
BI089795 cervix .a 266 to 924 1 to 660       660/661
(99 %)
5 diff
(99.3 %id)
BI762468 pooled colon, kidney, stomach .a 286 to 1094 1 to 813       813/980
(82 %)
22 diff
(97.8 %id)
TI_57151076   .a 286 to 1094 28 to 840       813/1007
(80 %)
26 diff
(97.5 %id)
BE898647 adenocarcinoma cell line, ovary .a 290 to 1030 1 to 728       728/964
(75 %)
29 diff
(97.0 %id)
BF313091 brain, neuroblastoma .a 320 to 1126 1 to 799       799/872
(91 %)
25 diff
(97.2 %id)
Z42682 brain, total brain .a 465 to 698 1 to 234       234/234
(100 %)
11 diff
(95.3 %id)
H08439 whole brain .a 469 to 843 1 to 385       385/398
(96 %)
11 diff
(97.3 %id)
CB121596 Liver .a 470 to 987 7 to 524       518/524
(98 %)
6 diff
(98.9 %id)
R54056 whole brain .a 471 to 852 1 to 390       390/474
(82 %)
11 diff
(97.7 %id)
H24109 whole brain .a 472 to 931 1 to 464       464/464
(100 %)
11 diff
(97.7 %id)
TI_154139219   .a 501 to 1089 80 to 667       588/588
(100 %)
4 diff
(99.4 %id)
CR591048 Placenta Cot 25-normalized .a 567 to 1817 1 to 1251       1251/1251
(100 %)
0 diff
(100 %id)
AL550148 placenta, Placenta Cot 25-normalized .a 567 to 1692 1 to 1115       1115/1134
(98 %)
14 diff
(98.8 %id)
BX403377 Placenta Cot 25-normalized .a 567 to 1318 1 to 746       746/819
(91 %)
10 diff
(98.8 %id)
BX100536 liver and spleen .a 581 to 1288 1 to 708       708/708
(100 %)
1 diff
(99.9 %id)
T83213 liver and spleen .a 581 to 883 1 to 304       304/304
(100 %)
5 diff
(98.4 %id)
BQ441319 melanotic melanoma, skin .a 590 to 1456 1 to 877       876/884
(99 %)
19 diff
(97.9 %id)
AA079003   .a 594 to 937 1 to 351       351/420
(83 %)
18 diff
(95.8 %id)
CF145563 CNCAP(3)T-225 cell line, Prostate .a 615 to 1259 8 to 652       645/652
(98 %)
9 diff
(98.7 %id)
TI_154177807   .a 615 to 1346 70 to 796       727/900
(80 %)
13 diff
(98.6 %id)
AL574105 placenta, Placenta Cot 25-normalized .a 617 to 1775 1194 to 42       1153/1197
(96 %)
6 diff
(99.5 %id)
CB132277 Liver .a 671 to 1238 1 to 568       568/568
(100 %)
2 diff
(99.7 %id)
CR597994 B cells (Ramos cell line) Cot 25-normalized .a 675 to 1798 1 to 1124       1124/1124
(100 %)
0 diff
(100 %id)
AL583108 B cells from Burkitt lymphoma .a 675 to 1281 1 to 605   fully sequenced,   605/605
(100 %)
5 diff
(99.2 %id)
BU190389 epithelioid carcinoma, Pancreas .a 701 to 1255 1 to 558       558/1032
(54 %)
14 diff
(98.7 %id)
CF454576 peripheral nervous system .a 701 to 1420 1 to 715       715/841
(85 %)
12 diff
(98.6 %id)
AL515814 brain, neuroblastoma, neuroblastoma cells .a 898 to 1816 918 to 1   fully sequenced,   918/918
(100 %)
6 diff
(99.4 %id)
AL562536 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 898 to 1804 906 to 1   fully sequenced,   906/906
(100 %)
3 diff
(99.7 %id)
AL515776 brain, neuroblastoma, neuroblastoma cells .a 943 to 1780 877 to 37   fully sequenced,   841/877
(95 %)
3 diff
(99.7 %id)
AL562560 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 973 to 1802 829 to 1   fully sequenced,   829/829
(100 %)
4 diff
(99.6 %id)
AL534165 brain, fetal brain .a 973 to 1811 836 to 1       836/944
(88 %)
10 diff
(99.0 %id)
TI_1948086772   .a 996 to 1803 934 to 123       812/1455
(55 %)
25 diff
(98.3 %id)
TI_1948086600   .a 1095 to 1803 832 to 124       709/1449
(48 %)
7 diff
(99.6 %id)
BF342613 brain, glioblastoma with EGFR amplification .a 1105 to 1836 1 to 718   AAA   718/718
(100 %)
21 diff
(97.1 %id)
BQ684807 ductal carcinoma, cell line, Pancreas .a 1109 to 1831 1 to 723       723/727
(99 %)
3 diff
(99.6 %id)
BQ687774 ductal carcinoma, cell line, Pancreas .a 1109 to 1831 1 to 724       724/724
(100 %)
1 diff
(99.9 %id)
BF344711 brain, glioblastoma with EGFR amplification .a 1112 to 1832 1 to 713   AAA   713/713
(100 %)
8 diff
(98.9 %id)
BI259076 cervical carcinoma cell line, cervix .a 1119 to 1834 1 to 716       716/739
(96 %)
13 diff
(98.3 %id)
BQ009419 Chondrosarcoma, Left Pubic Bone .a 1153 to 1836 702 to 19   AAA   684/684
(100 %)
0 diff
(100 %id)
TI_1948086425   .a 1157 to 1803 783 to 131       653/1335
(48 %)
29 diff
(97.9 %id)
AL583107 B cells from Burkitt lymphoma .a 1224 to 1798 570 to 1   fully sequenced,   570/570
(100 %)
9 diff
(98.5 %id)
TI_1948086259   .a 1250 to 1803 680 to 124       557/1419
(39 %)
20 diff
(98.6 %id)
AI659614 Prostate .a 1356 to 1832 495 to 19   AAA   477/477
(100 %)
3 diff
(99.4 %id)
AW193974 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1356 to 1837 486 to 1       486/486
(100 %)
3 diff
(99.4 %id)
BF034915 adenocarcinoma, ovary .a 1365 to 1832 1 to 467       467/467
(100 %)
1 diff
(99.8 %id)
T90764 liver and spleen .a 1367 to 1826 464 to 2       463/466
(99 %)
9 diff
(98.1 %id)
AI086027 B-cell, chronic lymphotic leukemia .a 1376 to 1831 457 to 2       456/457
(99 %)
0 diff
(100 %id)
DB524014 testis .a 1380 to 1834 1 to 455     Submitted on the opposite strand 455/457
(99 %)
2 diff
(99.6 %id)
AI937139 anaplastic oligodendroglioma, brain .a 1383 to 1831 449 to 1       449/449
(100 %)
3 diff
(99.4 %id)
AA829365 colon, colon tumor .a 1384 to 1833 448 to 1       448/448
(100 %)
5 diff
(98.9 %id)
AA918821 Kidney .a 1385 to 1833 450 to 3       448/450
(99 %)
0 diff
(100 %id)
AI218197 pooled .a 1391 to 1837 447 to 1       447/447
(100 %)
2 diff
(99.6 %id)
DB547751 hippocampus .a 1392 to 1831 1 to 439     Submitted on the opposite strand 439/439
(100 %)
5 diff
(98.9 %id)
DB515194 testis .a 1398 to 1832 1 to 434     Submitted on the opposite strand 434/434
(100 %)
1 diff
(99.8 %id)
AI336469 adenocarcinoma, colon .a 1410 to 1837 432 to 5       428/432
(99 %)
0 diff
(100 %id)
AW070946 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .a 1412 to 1833 422 to 1       422/423
(99 %)
9 diff
(97.9 %id)
H08723 whole brain .a 1414 to 1833 436 to 8       429/470
(91 %)
20 diff
(95.8 %id)
H22929 whole brain .a 1414 to 1833 436 to 8       429/482
(89 %)
14 diff
(97.1 %id)
AA079100   .a 1414 to 1832 434 to 6       429/464
(92 %)
12 diff
(97.5 %id)
AW473975 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1416 to 1836 421 to 1       421/421
(100 %)
0 diff
(100 %id)
BE350786 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 1418 to 1836 417 to 1       417/417
(100 %)
20 diff
(95.3 %id)
R54057 whole brain .a 1423 to 1833 422 to 8       415/429
(96 %)
6 diff
(98.7 %id)
AA577435 colon, colon tumor RER+ .a 1425 to 1833 412 to 4       409/412
(99 %)
0 diff
(100 %id)
BQ229778 embryonal carcinoma, cell line, testis .a 1428 to 1832 1 to 405   AAA   405/405
(100 %)
8 diff
(98.1 %id)
AA722774 heart .a 1435 to 1831 401 to 4       398/401
(99 %)
0 diff
(100 %id)
AI610462 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 1441 to 1836 396 to 1       396/396
(100 %)
0 diff
(100 %id)
AI623603 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1450 to 1836 387 to 1       387/387
(100 %)
1 diff
(99.8 %id)
AA912779 pooled .a 1452 to 1833 382 to 3       380/389
(97 %)
1 diff
(99.8 %id)
AW168607 bowel (skin primary), metastatic melanoma to bowel .a 1452 to 1836 384 to 1       384/387
(99 %)
1 diff
(99.8 %id)
AA609213   .a 1462 to 1837 379 to 3       377/379
(99 %)
0 diff
(100 %id)
AA923714 pooled .a 1473 to 1833 363 to 3       361/363
(99 %)
0 diff
(100 %id)
AI672973 thymus, pooled .a 1479 to 1832 359 to 1       357/360
(99 %)
3 diff
(99.2 %id)
AA293154 ovarian tumor, ovary .a 1486 to 1832 347 to 1       347/347
(100 %)
3 diff
(99.2 %id)
AI198020 anaplastic oligodendroglioma, brain .a 1498 to 1837 348 to 8       341/348
(97 %)
1 diff
(99.8 %id)
AA927962 adenocarcinoma, colon .a 1514 to 1837 328 to 4       325/328
(99 %)
1 diff
(99.7 %id)
BM145246 leukopheresis .a 1523 to 1832 324 to 16   AAA   309/309
(100 %)
21 diff
(93.3 %id)
FN144602 breast carcinoma .a 1527 to 1599 1 to 73       73/74
(98 %)
1 diff
(98.7 %id)
AI873660 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1529 to 1832 304 to 1       304/304
(100 %)
0 diff
(100 %id)
CN311118 embryonic stem cells, DMSO-treated H9 cellline .a 1536 to 1836 1 to 300   AAA   300/300
(100 %)
1 diff
(99.7 %id)
BE044401 pooled .a 1542 to 1833 294 to 3       292/299
(97 %)
0 diff
(100 %id)
Z39695 brain, total brain .a 1549 to 1832 284 to 1       284/284
(100 %)
2 diff
(99.3 %id)
AI383372 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1555 to 1833 281 to 3       279/281
(99 %)
0 diff
(100 %id)
AI204653 heart .a 1556 to 1833 285 to 8       278/285
(97 %)
0 diff
(100 %id)
AA774521 heart .a 1561 to 1832 301 to 31   AAA   271/271
(100 %)
1 diff
(99.7 %id)
EC552870 Prostate .a 1570 to 1676 1 to 106       106/106
(100 %)
1 diff
(99.1 %id)
AI867628 Prostate .a 1570 to 1836 267 to 1       267/267
(100 %)
1 diff
(99.7 %id)
F02166 brain, total brain .a 1602 to 1832 231 to 1       231/233
(99 %)
1 diff
(99.6 %id)
CN311120 embryonic stem cells, DMSO-treated H9 cellline .b 1 to 596 1 to 596   tiling clone,   596/596
(100 %)
0 diff
(100 %id)
BM800015 eye, retinoblastoma .b 530 to 1436 1 to 927   tiling clone,   927/1110
(83 %)
10 diff
(99.1 %id)
BX333554 Neuroblastoma Cot 25-normalized .b 542 to 1553 1009 to 1   tiling clone,   1009/1067
(94 %)
14 diff
(98.7 %id)
AI187740   .b 1303 to 1587 287 to 3   tiling clone,   285/287
(99 %)
0 diff
(100 %id)
AA479566 ovarian tumor, ovary .b 1328 to 1565 1 to 234   fully sequenced,   234/234
(100 %)
9 diff
(96.2 %id)
BF965605 Bone, osteosarcoma, cell line .b 1328 to 1586 1 to 257   AAA   257/257
(100 %)
3 diff
(98.9 %id)
AA430434 ovarian tumor, ovary .b 1329 to 1563 15 to 245   fully sequenced,   231/245
(94 %)
6 diff
(97.6 %id)
AI689520 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 1343 to 1587 248 to 4       245/248
(98 %)
0 diff
(100 %id)
BF115405 fibrotheoma, ovary .b 1369 to 1583 221 to 7       215/225
(95 %)
0 diff
(100 %id)
AA477404 ovarian tumor, ovary .b 1405 to 1582 178 to 1   fully sequenced,   178/178
(100 %)
2 diff
(98.9 %id)
AA453110 ovarian tumor, ovary .b 1482 to 1582 101 to 1   fully sequenced,   101/101
(100 %)
0 diff
(100 %id)
DC301525   .c 1 to 539 1 to 539   tiling clone,   539/539
(100 %)
1 diff
(99.9 %id)
NM_001173466.1   .c 5 to 1741 1 to 1737 exact RefSeq, AAA   1737/1737
(100 %)
0 diff
(100 %id)
DC393722 colon, tumor tissue .c 5 to 564 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC375895 brain .c 11 to 441 1 to 431       431/431
(100 %)
0 diff
(100 %id)
DC411239 kidney, tumor tissue .c 14 to 570 1 to 559       559/559
(100 %)
3 diff
(99.5 %id)
BQ218974 brain .c 15 to 614 1 to 607       607/1020
(59 %)
26 diff
(97.5 %id)
DC387324   .c 17 to 563 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DC397686 testis .c 18 to 588 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
DC383852 Prostate .c 19 to 586 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
DC371387   .c 20 to 538 1 to 519       519/519
(100 %)
0 diff
(100 %id)
DC297851   .c 23 to 570 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
DC297911   .c 23 to 594 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
DC299307   .c 23 to 597 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC300024   .c 23 to 596 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC303103 cerebellum .c 23 to 583 1 to 561       561/561
(100 %)
2 diff
(99.7 %id)
BP210330 cerebellum .c 23 to 596 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
DC344812 colon .c 23 to 448 1 to 427       427/427
(100 %)
2 diff
(99.6 %id)
DC427819   .c 23 to 576 1 to 554       554/554
(100 %)
1 diff
(99.9 %id)
DC357348 heart .c 23 to 570 1 to 548       548/548
(100 %)
0 diff
(100 %id)
BP239972 Liver .c 23 to 571 1 to 549       549/552
(99 %)
16 diff
(97.2 %id)
BJ992596 hepatoblastoma .c 23 to 469 1 to 447       447/447
(100 %)
0 diff
(100 %id)
DC385521 skeletal muscle .c 23 to 538 1 to 515       515/515
(100 %)
1 diff
(99.9 %id)
DC392067 Spleen .c 23 to 560 1 to 538       538/538
(100 %)
0 diff
(100 %id)
DC392068 Spleen .c 23 to 574 1 to 552       552/552
(100 %)
1 diff
(99.9 %id)
BP351112   .c 23 to 603 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC393295 breast, tumor tissue .c 23 to 554 1 to 532       532/532
(100 %)
1 diff
(99.9 %id)
DC397288 testis .c 23 to 595 1 to 573       573/573
(100 %)
3 diff
(99.5 %id)
DB479078 hippocampus .c 25 to 530 1 to 506       506/506
(100 %)
3 diff
(99.5 %id)
BF245003 brain, glioblastoma .c 29 to 611 1 to 580       586/823
(71 %)
25 diff
(97.0 %id)
BP196552 adrenal gland .c 32 to 613 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP340123 Spleen .c 32 to 422 1 to 392       392/581
(67 %)
11 diff
(98.2 %id)
BI549438 brain, hippocampus .c 34 to 494 1 to 461       461/461
(100 %)
6 diff
(98.7 %id)
AY237818   .c 37 to 1739 1 to 1703 exact     1703/1703
(100 %)
2 diff
(99.9 %id)
DC361764 Kidney .c 38 to 564 1 to 527       527/527
(100 %)
0 diff
(100 %id)
DC388313 small intestine .c 38 to 859 1 to 578       578/578
(100 %)
0 diff
(100 %id)
DA820364 pericardium .c 39 to 464 33 to 458   capped   426/428
(99 %)
3 diff
(99.3 %id)
DB115443 thymus .c 42 to 592 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
CD627191   .c 44 to 250 1 to 207       207/208
(99 %)
1 diff
(99.6 %id)
CD683807 normal nasopharynx .c 44 to 396 15 to 369       355/369
(96 %)
8 diff
(97.9 %id)
CB150666 cervix, Uterine .c 45 to 565 1 to 521       521/521
(100 %)
9 diff
(98.3 %id)
DR762304 embryonic stem .c 46 to 890 1 to 845       845/845
(100 %)
0 diff
(100 %id)
DA612011   .c 46 to 570 2 to 526   capped   525/525
(100 %)
3 diff
(99.5 %id)
DB246002 uterus, tumor tissue .c 46 to 534 2 to 490   capped   489/489
(100 %)
2 diff
(99.6 %id)
DA004135   .c 47 to 534 2 to 489   capped   488/488
(100 %)
1 diff
(99.8 %id)
DA613054   .c 47 to 570 2 to 524   capped   523/523
(100 %)
2 diff
(99.7 %id)
BP272837   .c 47 to 571 1 to 526       525/563
(93 %)
21 diff
(96.3 %id)
CB135213 Liver .c 47 to 593 1 to 547       547/547
(100 %)
1 diff
(99.9 %id)
CB137782 Liver .c 47 to 458 1 to 412       412/412
(100 %)
0 diff
(100 %id)
CB146939 Liver .c 47 to 442 1 to 396       396/396
(100 %)
6 diff
(98.5 %id)
DA753225   .c 47 to 570 2 to 525   capped   524/524
(100 %)
2 diff
(99.7 %id)
DA845053 placenta .c 47 to 534 2 to 489   capped   488/488
(100 %)
4 diff
(99.2 %id)
DB049378 testis .c 47 to 610 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB175218 kidney, tumor tissue .c 47 to 609 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB175232 kidney, tumor tissue .c 47 to 604 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA005128   .c 48 to 609 2 to 567   capped   566/566
(100 %)
4 diff
(99.3 %id)
AK293342   .c 48 to 1737 1 to 1690 E244G G363W     1690/1690
(100 %)
4 diff
(99.8 %id)
DC300599   .c 48 to 619 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
CF141404 CNCAP(3)T-225 cell line, Prostate .c 50 to 594 15 to 559       545/559
(97 %)
8 diff
(98.6 %id)
DA039849 bladder .c 52 to 538 2 to 488   capped   487/487
(100 %)
0 diff
(100 %id)
DA088292 cerebellum .c 52 to 525 2 to 475   capped   474/474
(100 %)
1 diff
(99.8 %id)
DA198070 brain .c 52 to 531 2 to 481   capped   480/480
(100 %)
1 diff
(99.8 %id)
CR597176 Placenta Cot 25-normalized .c 52 to 1712 1 to 1661 exact     1661/1661
(100 %)
0 diff
(100 %id)
AL552409 placenta, Placenta Cot 25-normalized .c 52 to 872 1 to 821   fully sequenced,   821/821
(100 %)
0 diff
(100 %id)
DA512156 brain .c 52 to 534 2 to 484   capped   483/483
(100 %)
0 diff
(100 %id)
DA656258   .c 52 to 549 2 to 499   capped   498/503
(99 %)
2 diff
(99.7 %id)
DA843980 placenta .c 52 to 859 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA467250 cord Blood .c 55 to 613 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BI197486 brain, neuroblastoma .c 57 to 621 1 to 567       567/987
(57 %)
15 diff
(98.5 %id)
BE798202 lung, small cell carcinoma .c 58 to 843 17 to 791       777/976
(79 %)
23 diff
(97.7 %id)
BM741695 stomach .c 63 to 615 1 to 555       555/555
(100 %)
8 diff
(98.6 %id)
BE535674 cervix .c 64 to 612 1 to 558       558/823
(67 %)
19 diff
(97.7 %id)
AL559497 T cells from T cell leukemia .c 66 to 403 1 to 338       338/338
(100 %)
0 diff
(100 %id)
BG329345 eye, retinoblastoma .c 66 to 557 1 to 494       494/1003
(49 %)
17 diff
(98.4 %id)
CR601072 HeLa cells Cot 25-normalized .c 68 to 1722 1 to 1655 exact tiling clone,   1655/1655
(100 %)
0 diff
(100 %id)
AL555059 placenta .c 68 to 909 1 to 840   fully sequenced,   840/840
(100 %)
0 diff
(100 %id)
BG283883 adenocarcinoma, cell line, Prostate .c 70 to 584 1 to 516       516/516
(100 %)
1 diff
(99.9 %id)
DB010137 colon, tumor tissue .c 70 to 614 2 to 547   capped   546/546
(100 %)
4 diff
(99.3 %id)
DB129677 thymus .c 72 to 614 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB458512 testis .c 73 to 544 1 to 472       472/472
(100 %)
1 diff
(99.8 %id)
BM784368 stomach .c 73 to 534 1 to 462       462/462
(100 %)
0 diff
(100 %id)
DA005932   .c 74 to 570 2 to 498   capped   497/497
(100 %)
0 diff
(100 %id)
DA700788   .c 74 to 575 2 to 505   capped   504/504
(100 %)
2 diff
(99.7 %id)
DB040531 testis .c 74 to 861 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
BI861758 breast, mammary adenocarcinoma, cell line .c 75 to 840 1 to 765       765/765
(100 %)
7 diff
(99.1 %id)
TI_57193145   .c 75 to 840 51 to 815       765/765
(100 %)
7 diff
(99.1 %id)
CB126949 Liver .c 75 to 593 1 to 519       519/519
(100 %)
2 diff
(99.7 %id)
DA342231 substantia nigra .c 77 to 605 15 to 543   capped   529/542
(97 %)
6 diff
(98.9 %id)
CD698374 normal nasopharynx .c 77 to 599 33 to 555       523/555
(94 %)
6 diff
(99.0 %id)
BE394920 endometrium, adenocarcinoma cell line, uterus .c 77 to 364 1 to 291       291/294
(98 %)
5 diff
(98.3 %id)
DA561105 heart .c 78 to 553 2 to 477   capped   476/476
(100 %)
0 diff
(100 %id)
BE795356 lung, small cell carcinoma .c 78 to 870 1 to 786       786/932
(84 %)
24 diff
(97.5 %id)
DA909396   .c 78 to 643 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB003309 breast, tumor tissue .c 78 to 614 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA608037   .c 79 to 570 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
DA997261   .c 79 to 570 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
Z19095   .c 86 to 418 1 to 334       334/334
(100 %)
3 diff
(99.2 %id)
BI912315 leukocyte .c 91 to 417 1 to 328       328/809
(40 %)
6 diff
(99.3 %id)
TI_57236514   .c 91 to 417 1 to 328       328/809
(40 %)
6 diff
(99.3 %id)
CD627195   .c 96 to 250 1 to 155       155/156
(99 %)
1 diff
(99.4 %id)
BI194695 epithelioid carcinoma cell line, Pancreas .c 105 to 463 1 to 361       361/1058
(34 %)
11 diff
(99.0 %id)
R87881 brain .c 108 to 558 1 to 463       463/526
(88 %)
24 diff
(95.5 %id)
DR001552 fetal brain .c 119 to 822 1 to 704       704/704
(100 %)
5 diff
(99.3 %id)
BM708749 eye, RPE and Choroid .c 123 to 460 1 to 338   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 338/345
(97 %)
5 diff
(98.6 %id)
CD627192   .c 130 to 249 8 to 127       120/128
(93 %)
2 diff
(98.5 %id)
BE904852 epithelioid carcinoma, Pancreas .c 138 to 871 1 to 723       723/745
(97 %)
16 diff
(97.9 %id)
BQ083775 stomach .c 319 to 693 1 to 375       375/375
(100 %)
1 diff
(99.8 %id)
BQ084010 stomach .c 319 to 695 1 to 377       377/377
(100 %)
0 diff
(100 %id)
BQ937337 epidermoid carcinoma, cell line, lung .c 334 to 1216 1 to 885       885/888
(99 %)
9 diff
(99.0 %id)
CB215621 normal endometrium, late proliferativephase, cycle day 13, uterus .c 337 to 651 1 to 316       316/316
(100 %)
2 diff
(99.4 %id)
CN481081 eye .c 631 to 1228 1 to 598       598/598
(100 %)
1 diff
(99.9 %id)
AA330197   .c 675 to 1044 1 to 373       373/374
(99 %)
10 diff
(97.4 %id)
AL110160 uterus .c 695 to 1737 1 to 1042   available from DKFZ, AAA   1042/1042
(100 %)
2 diff
(99.9 %id)
AV723824 hypothalamus .c 732 to 1158 1 to 421       421/428
(98 %)
11 diff
(97.5 %id)
BQ058330 lymph, lymphoma, cell line .c 748 to 1670 1 to 940   AAA   940/1029
(91 %)
25 diff
(97.6 %id)
BQ066293 lymph, lymphoma, cell line .c 748 to 1594 1 to 854       854/1124
(75 %)
21 diff
(98.2 %id)
BF847254 lung_normal .c 752 to 1043 1 to 298       299/303
(98 %)
21 diff
(93.1 %id)
BI011758 lung_normal .c 754 to 981 276 to 45       232/279
(83 %)
8 diff
(97.2 %id)
AL583271 B cells from Burkitt lymphoma .c 758 to 1707 941 to 1       941/941
(100 %)
27 diff
(97.2 %id)
BM827261 Ascites, stomach .c 786 to 1227 1 to 442       442/442
(100 %)
10 diff
(97.8 %id)
BE929854 placenta_normal .c 801 to 1307 1 to 506       506/506
(100 %)
8 diff
(98.5 %id)
BF804160 colon_ins .c 809 to 1043 11 to 245       235/250
(94 %)
13 diff
(94.8 %id)
BF804096 colon_ins .c 828 to 1043 1 to 217       217/222
(97 %)
14 diff
(93.7 %id)
AL575721 placenta, Placenta Cot 25-normalized .c 842 to 1690 868 to 24   fully sequenced,   845/868
(97 %)
9 diff
(99.0 %id)
AL577662 placenta .c 848 to 1718 866 to 4   fully sequenced,   863/866
(99 %)
1 diff
(99.9 %id)
ES315311 occipital scalp hair, skin .c 850 to 1051 1 to 202       202/202
(100 %)
1 diff
(99.6 %id)
BQ647219 hepatocellular carcinoma, cell line, Liver .c 852 to 1498 10 to 657       648/958
(67 %)
16 diff
(98.4 %id)
AA335484 epididymis .c 865 to 1071 1 to 207       207/207
(100 %)
2 diff
(99.1 %id)
BI011764 lung_normal .c 870 to 1247 8 to 384       385/396
(97 %)
21 diff
(94.7 %id)
BQ354346 head_neck .c 878 to 1213 80 to 411       331/411
(80 %)
6 diff
(98.6 %id)
CD698356 normal nasopharynx .c 878 to 1250 19 to 391       373/394
(94 %)
8 diff
(98.0 %id)
BF528629 anaplastic oligodendroglioma with 1p/19qloss, brain .c 881 to 1641 1 to 755       755/948
(79 %)
25 diff
(97.4 %id)
AA325220 brain, cerebellum .c 890 to 1250 1 to 362       362/365
(99 %)
4 diff
(99.0 %id)
BG910604 anaplastic oligodendroglioma with 1p/19qloss, brain .c 896 to 1608 1 to 708       708/709
(99 %)
10 diff
(98.6 %id)
BF880685 lung_tumor .c 899 to 1298 406 to 1     Submitted on the opposite strand 406/406
(100 %)
23 diff
(94.4 %id)
AA406191 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 924 to 1290 1 to 366   fully sequenced,   366/366
(100 %)
1 diff
(99.8 %id)
BQ327397 heart_neonatal .c 936 to 1304 569 to 201       369/569
(64 %)
0 diff
(100 %id)
BI063074 uterus_tumor .c 963 to 1281 320 to 2       319/320
(99 %)
0 diff
(100 %id)
AI064806 Liver .c 994 to 1600 1 to 606       606/606
(100 %)
1 diff
(99.9 %id)
BQ320691 colon .c 998 to 1386 14 to 413       412/413
(99 %)
58 diff
(86.0 %id)
BF767508 colon_normal .c 1005 to 1234 17 to 248       232/248
(93 %)
11 diff
(95.6 %id)
AW750290 breast .c 1062 to 1455 34 to 422       392/424
(92 %)
10 diff
(97.7 %id)
BQ009784 Chondrosarcoma, Left Pubic Bone .c 1062 to 1741 698 to 19   AAA   680/680
(100 %)
0 diff
(100 %id)
BM692621 eye, human retina .c 1063 to 1186 1 to 124   fully sequenced,   124/124
(100 %)
0 diff
(100 %id)
CK819312 Islets of Langerhans, Pancreas .c 1067 to 1648 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BF244655 brain, glioblastoma .c 1068 to 1676 1 to 606       606/1152
(52 %)
15 diff
(98.7 %id)
BQ775897 Bone, Human Chondrosarcoma Cell Line .c 1075 to 1741 685 to 19   AAA   667/667
(100 %)
1 diff
(99.9 %id)
BM128590 Islets of Langerhans, Pancreas .c 1083 to 1587 1 to 505       505/505
(100 %)
0 diff
(100 %id)
BQ773275 Chondrosarcoma Cell line .c 1090 to 1737 667 to 19   AAA   649/649
(100 %)
1 diff
(99.9 %id)
BF834201 head_neck .c 1096 to 1213 1 to 115       115/115
(100 %)
9 diff
(92.2 %id)
AA649195 germinal center B cell .c 1103 to 1421 319 to 1       319/319
(100 %)
0 diff
(100 %id)
BU631921 cell lines, Chondrosarcoma .c 1103 to 1741 657 to 19   AAA   639/639
(100 %)
0 diff
(100 %id)
W81639 heart .c 1114 to 1286 1 to 175       175/175
(100 %)
3 diff
(98.3 %id)
BM663842 eye, human retina .c 1125 to 1737 632 to 19   fully sequenced, AAA   614/614
(100 %)
2 diff
(99.7 %id)
BF092248 testis_normal .c 1155 to 1544 25 to 416       393/416
(94 %)
11 diff
(97.4 %id)
BG946290 bladder_tumor .c 1155 to 1558 413 to 10       404/423
(95 %)
6 diff
(98.6 %id)
BE856301 brain, glioblastoma (pooled) .c 1155 to 1734 580 to 1       580/687
(84 %)
14 diff
(98.0 %id)
TI_149313016   .c 1156 to 1733 673 to 95   AAA   579/910
(63 %)
16 diff
(98.3 %id)
BX340531   .c 1158 to 1683 527 to 1       527/574
(91 %)
7 diff
(98.8 %id)
AI763061 2 pooled tumors (clear cell type), Kidney .c 1159 to 1738 580 to 4       577/782
(73 %)
14 diff
(98.3 %id)
CK819311 Islets of Langerhans, Pancreas .c 1168 to 1742 580 to 1       580/580
(100 %)
0 diff
(100 %id)
BM128360 Islets of Langerhans, Pancreas .c 1175 to 1742 572 to 1   tiling clone,   572/573
(99 %)
0 diff
(100 %id)
BG002684 placenta_normal .c 1176 to 1515 7 to 345       342/352
(97 %)
7 diff
(98.1 %id)
AI140344 heart .c 1204 to 1738 535 to 1       535/535
(100 %)
0 diff
(100 %id)
BF063934 colon, colon tumor, RER+ .c 1205 to 1737 536 to 4       533/537
(99 %)
2 diff
(99.7 %id)
AW340290 pooled .c 1214 to 1738 525 to 1       525/525
(100 %)
0 diff
(100 %id)
AA404313 ovarian tumor, ovary .c 1224 to 1715 1 to 490       490/491
(99 %)
20 diff
(96.0 %id)
CF541081 lung .c 1229 to 1733 525 to 19   AAA   507/507
(100 %)
2 diff
(99.7 %id)
BQ962114 epithelioid carcinoma cell line, Pancreas .c 1236 to 1737 1 to 502   AAA   502/502
(100 %)
0 diff
(100 %id)
AA410368 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1285 to 1741 457 to 1   fully sequenced,   457/457
(100 %)
5 diff
(99.0 %id)
AW797192 uterus .c 1288 to 1490 250 to 49       202/251
(80 %)
1 diff
(99.7 %id)
AL581104 T cells from T cell leukemia .c 1332 to 1716 387 to 1       387/387
(100 %)
3 diff
(99.3 %id)
W81523 heart .c 1364 to 1737 377 to 1       377/377
(100 %)
6 diff
(98.5 %id)
AA971991 pooled .c 1377 to 1693 315 to 1       315/368
(85 %)
16 diff
(95.7 %id)
BM145433 leukopheresis .c 1397 to 1737 357 to 16   AAA   342/342
(100 %)
1 diff
(99.8 %id)
AI218895 pooled .c 1403 to 1738 339 to 4       336/339
(99 %)
0 diff
(100 %id)
AU310198 neuroblastoma .d 1 to 583 17 to 600   tiling clone,   584/600
(97 %)
7 diff
(98.9 %id)
AU310199 neuroblastoma .d 1022 to 1581 565 to 6   tiling clone,   560/565
(99 %)
0 diff
(100 %id)
Z45578 brain, total brain .e 1 to 301 1 to 300   tiling clone,   300/300
(100 %)
2 diff
(99.4 %id)
R16340 whole brain .e 2 to 387 1 to 396       396/439
(90 %)
15 diff
(96.6 %id)
CN311114 embryonic stem cells, DMSO-treated H9 cellline .e 23 to 770 9 to 756   tiling clone,   748/756
(98 %)
7 diff
(99.1 %id)
BM704436 eye, Retina Foveal and Macular .e 715 to 937 1 to 223   tiling clone, fully sequenced,   223/223
(100 %)
0 diff
(100 %id)
DB518639 testis .e 881 to 1361 3 to 488     Submitted on the opposite strand 490/488
(100 %)
8 diff
(98.4 %id)
BU736600 eye, Retina Foveal and Macular .e 907 to 1365 476 to 19   tiling clone, fully sequenced, AAA   458/458
(100 %)
1 diff
(99.8 %id)
R41416 whole brain .e 1136 to 1362 239 to 8   tiling clone,   232/239
(97 %)
0 diff
(100 %id)
F04433 brain, total brain .e 1143 to 1361 219 to 1       219/219
(100 %)
1 diff
(99.6 %id)
BP274663 Kidney .f 1 to 550 1 to 551   tiling clone,   551/582
(94 %)
22 diff
(96.3 %id)
BI910717 leukocyte .f 441 to 1285 1 to 849   tiling clone,   851/849
(100 %)
12 diff
(98.6 %id)
TI_57237467   .f 441 to 1285 30 to 878       851/878
(96 %)
16 diff
(98.2 %id)
BQ959422 leiomyosarcoma, uterus .f 1083 to 1872 1 to 794   tiling clone,   794/913
(86 %)
12 diff
(98.7 %id)
BU615894 Bone, Subchondral Bone .f 1404 to 2132 745 to 19   tiling clone, AAA   727/727
(100 %)
2 diff
(99.8 %id)
DB145492 thymus .g 1 to 480 2 to 481   tiling clone, capped   480/480
(100 %)
1 diff
(99.8 %id)
BI756486 brain .g 13 to 859 1 to 862       862/876
(98 %)
33 diff
(96.3 %id)
TI_57216849   .g 13 to 859 35 to 896       862/910
(94 %)
33 diff
(96.4 %id)
DB112547 thymus .g 21 to 593 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
AL553456 placenta, Placenta Cot 25-normalized .g 255 to 1212 1 to 956       956/956
(100 %)
10 diff
(99.0 %id)
BI830232 brain, medulla .g 257 to 814 1 to 557       557/557
(100 %)
2 diff
(99.7 %id)
TI_57170978   .g 257 to 814 33 to 589       557/589
(94 %)
6 diff
(99.0 %id)
TI_57216455   .g 262 to 1068 21 to 823       803/824
(97 %)
13 diff
(98.5 %id)
DA917162 small intestine .g 267 to 839 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
BI756654 brain .g 269 to 1068 1 to 796       796/797
(99 %)
8 diff
(99.0 %id)
DA867099 Prostate .g 273 to 800 2 to 529   capped   528/528
(100 %)
2 diff
(99.7 %id)
DA963885 stomach .g 273 to 847 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
DB263726 uterus .g 279 to 859 2 to 584   capped   583/583
(100 %)
5 diff
(99.2 %id)
DB203812 trachea .g 290 to 854 2 to 567   tiling clone, capped   566/568
(99 %)
3 diff
(99.5 %id)
DA874677 Prostate .g 300 to 863 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA877890 Prostate .g 300 to 888 2 to 592   capped   591/591
(100 %)
5 diff
(99.2 %id)
CX166188 human embryonic stem cells differentiated toan early endodermal cell type .g 308 to 1133 1 to 826       826/826
(100 %)
4 diff
(99.6 %id)
DA150628 amygdala .g 310 to 899 2 to 592   capped   591/591
(100 %)
5 diff
(99.2 %id)
DA255331 caudate nucleus .g 310 to 883 2 to 575   capped   574/574
(100 %)
5 diff
(99.2 %id)
DB175612 kidney, tumor tissue .g 310 to 870 2 to 563   capped   562/566
(99 %)
5 diff
(99.2 %id)
DA550352   .g 313 to 806 2 to 495   capped   494/494
(100 %)
1 diff
(99.8 %id)
DA270123 caudate nucleus .g 322 to 895 2 to 575   capped   574/574
(100 %)
3 diff
(99.5 %id)
DA283700 corpus callosum .g 322 to 896 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
DA374431 thalamus .g 322 to 867 2 to 547   tiling clone, capped   546/546
(100 %)
3 diff
(99.5 %id)
AU310481 neuroblastoma .g 322 to 900 1 to 579       579/579
(100 %)
6 diff
(99.0 %id)
DA815994   .g 322 to 882 2 to 562   capped   561/561
(100 %)
3 diff
(99.5 %id)
DA014078 adrenal gland .g 323 to 884 2 to 563   capped   562/562
(100 %)
4 diff
(99.3 %id)
AK094302 cerebellum .g 323 to 2338 1 to 2016   tiling clone, available from FLJ,   2016/2016
(100 %)
5 diff
(99.8 %id)
DA058718 cerebellum .g 324 to 882 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
DA311171 hippocampus .g 324 to 892 2 to 570   capped   569/569
(100 %)
5 diff
(99.2 %id)
DA348275 substantia nigra .g 324 to 863 2 to 542   capped   541/541
(100 %)
4 diff
(99.3 %id)
DA176730 amygdala .g 327 to 801 2 to 476   capped   475/475
(100 %)
1 diff
(99.8 %id)
DA373057 thalamus .g 327 to 961 2 to 636   capped   635/635
(100 %)
3 diff
(99.6 %id)
BX487676   .g 328 to 985 1 to 658       658/658
(100 %)
6 diff
(99.1 %id)
DA962958 stomach .g 328 to 889 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DA269932 caudate nucleus .g 330 to 886 2 to 558   capped   557/557
(100 %)
6 diff
(99.0 %id)
CN291343 embryonic stem cells, DMSO-treated H9 cellline .g 330 to 713 1 to 384       384/384
(100 %)
4 diff
(99.0 %id)
DA839623 placenta .g 330 to 876 2 to 549   capped   548/548
(100 %)
4 diff
(99.3 %id)
DB172818 kidney, tumor tissue .g 330 to 922 2 to 595   capped   594/594
(100 %)
5 diff
(99.2 %id)
DB206893 trachea .g 330 to 806 2 to 478   capped   477/477
(100 %)
1 diff
(99.8 %id)
BJ996791 hepatoblastoma .g 331 to 760 1 to 430       430/430
(100 %)
1 diff
(99.8 %id)
DA940802 Spleen .g 332 to 899 2 to 569   capped   568/568
(100 %)
5 diff
(99.2 %id)
DA880149 Prostate .g 338 to 900 2 to 565   capped   564/564
(100 %)
4 diff
(99.3 %id)
TI_57244297   .g 346 to 1033 27 to 715       689/719
(95 %)
7 diff
(99.1 %id)
BI916000 brain .g 351 to 1033 1 to 684       684/688
(99 %)
12 diff
(98.3 %id)
AI903545 breast .g 355 to 775 422 to 1       422/442
(95 %)
14 diff
(96.9 %id)
BM805469 brain, hippocampus .g 378 to 1292 10 to 1028       931/1060
(87 %)
32 diff
(97.0 %id)
DA366880 subthalamic nucleus .g 412 to 961 2 to 551   capped   550/550
(100 %)
3 diff
(99.5 %id)
AA463652 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g 669 to 926 1 to 258       258/258
(100 %)
3 diff
(98.9 %id)
BI059967 uterus_tumor .g 711 to 953 1 to 243       243/243
(100 %)
2 diff
(99.2 %id)
BE766985 nervous_tumor .g 727 to 954 1 to 226       226/233
(96 %)
9 diff
(96.2 %id)
CX865706 embryonic stem .g 731 to 1136 1 to 406       406/406
(100 %)
3 diff
(99.3 %id)
AI903581 breast .g 766 to 1325 564 to 3       562/565
(99 %)
12 diff
(97.9 %id)
BM746544 stomach .g 850 to 1198 1 to 349       349/349
(100 %)
9 diff
(97.5 %id)
AL576455 placenta, Placenta Cot 25-normalized .g 1752 to 2304 554 to 1       554/610
(90 %)
6 diff
(99.1 %id)
DB296812 cerebellum .g 1816 to 2338 523 to 1       523/523
(100 %)
2 diff
(99.7 %id)
CX865626 embryonic stem .g 1818 to 2338 559 to 39   AAA   521/521
(100 %)
20 diff
(96.2 %id)
BJ996792 hepatoblastoma .g 1868 to 2298 431 to 1       431/431
(100 %)
0 diff
(100 %id)
DA154859 amygdala .h 1 to 582 2 to 583   tiling clone, capped   582/582
(100 %)
1 diff
(99.9 %id)
BM819018 stomach .h 1 to 587 1 to 587       587/587
(100 %)
5 diff
(99.2 %id)
CB150070 Liver .h 2 to 494 19 to 511       493/493
(100 %)
3 diff
(99.4 %id)
CB123673 Liver .h 6 to 652 1 to 647       647/647
(100 %)
0 diff
(100 %id)
BM762954 myeloma .h 6 to 543 1 to 538       538/538
(100 %)
0 diff
(100 %id)
DA005870   .h 7 to 567 2 to 562   capped   561/562
(99 %)
0 diff
(100 %id)
DA372988 thalamus .h 7 to 633 2 to 628   capped   627/627
(100 %)
2 diff
(99.7 %id)
DA612758   .h 7 to 581 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BP432459   .h 17 to 319 1 to 303       303/303
(100 %)
5 diff
(98.4 %id)
DA843658 placenta .h 17 to 581 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BF685049 leiomyosarcoma cell line, uterus .h 21 to 758 1 to 738       738/894
(82 %)
28 diff
(96.9 %id)
BP364511 lung .h 21 to 603 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BF314999 brain, neuroblastoma .h 26 to 799 1 to 750       714/792
(90 %)
24 diff
(97.0 %id)
BI197699 brain, neuroblastoma .h 26 to 666 1 to 639       639/639
(100 %)
7 diff
(99.0 %id)
BI199879 brain, neuroblastoma .h 26 to 376 1 to 354       354/686
(51 %)
11 diff
(98.4 %id)
DA642285 Liver .h 29 to 641 2 to 614   capped   613/613
(100 %)
2 diff
(99.7 %id)
DA008094   .h 35 to 544 2 to 511   capped   510/510
(100 %)
0 diff
(100 %id)
DA054796 cerebellum .h 35 to 544 2 to 511   capped   510/510
(100 %)
0 diff
(100 %id)
DA138848 alzheimer cortex .h 35 to 571 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA430989 colon .h 35 to 524 2 to 491   capped   490/490
(100 %)
0 diff
(100 %id)
BM018628 astrocytoma grade IV, cell line, brain .h 35 to 859 1 to 823       825/824
(100 %)
19 diff
(97.7 %id)
DA964584 stomach .h 35 to 587 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
TI_59389293   .h 36 to 859 101 to 922       824/823
(100 %)
18 diff
(97.9 %id)
BM552143 leiomyosarcoma, uterus .h 37 to 972 1 to 944   tiling clone,   944/1004
(94 %)
23 diff
(97.8 %id)
BQ058621 lymph, lymphoma, cell line .h 42 to 876 1 to 838   tiling clone,   838/982
(85 %)
6 diff
(99.4 %id)
TI_57219231   .h 43 to 711 27 to 702       674/702
(96 %)
27 diff
(96.2 %id)
BE312226 brain, neuroblastoma .h 45 to 709 1 to 674       674/769
(87 %)
32 diff
(95.9 %id)
BE263819 lung, small cell carcinoma .h 46 to 685 1 to 637       637/641
(99 %)
8 diff
(98.8 %id)
DB103644 thymus .h 47 to 614 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
T09449   .h 48 to 400 1 to 352       352/352
(100 %)
4 diff
(98.9 %id)
BI753809 brain .h 49 to 711 1 to 671       669/671
(99 %)
25 diff
(96.3 %id)
BM808949 brain, hippocampus .h 51 to 841 12 to 806       795/956
(83 %)
16 diff
(98.4 %id)
CB961264 Human Placenta, placenta .h 52 to 567 24 to 540       517/752
(68 %)
27 diff
(96.5 %id)
AL558995 T cells from T cell leukemia .h 70 to 863 1 to 791   tiling clone, fully sequenced,   791/791
(100 %)
1 diff
(99.9 %id)
BI910698 leukocyte .h 70 to 816 1 to 746       746/746
(100 %)
3 diff
(99.6 %id)
TI_57237611   .h 70 to 816 30 to 775       746/775
(96 %)
8 diff
(99.0 %id)
CN311115 embryonic stem cells, cell lines H1, H7, andH9 .h 78 to 734 1 to 657       657/657
(100 %)
1 diff
(99.9 %id)
AL580697 T cells from T cell leukemia .h 802 to 1632 858 to 25 W7L T9Y L10P S11X G12T ... tiling clone, fully sequenced,   831/855
(97 %)
26 diff
(97.0 %id)
BI829162 brain, medulla .i 1 to 830 1 to 828 W25X C89L P107T G119W H120A ... tiling clone,   828/860
(96 %)
34 diff
(96.1 %id)
TI_57175894   .i 1 to 830 69 to 896 W25X C89L P107T G119W H120A ...     828/928
(89 %)
40 diff
(95.7 %id)
BQ015564 Chondrosarcoma, Left Pelvis .j-u 1 to 677 697 to 18 E44G P45A G46R A47S Q48P ... tiling clone, AAA   679/682
(99 %)
6 diff
(99.2 %id)
BU729690 eye, optic nerve .j-u 64 to 677 632 to 19 exact tiling clone, AAA   614/614
(100 %)
0 diff
(100 %id)
AI361791 B-cell, chronic lymphotic leukemia .j-u 308 to 673 380 to 15   AAA   366/366
(100 %)
0 diff
(100 %id)
DA913856   .k 1 to 561 2 to 562 A10T tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
DA779703 brain .l 1 to 574 2 to 576   tiling clone, capped   575/575
(100 %)
2 diff
(99.7 %id)
DA081956 cerebellum .l 41 to 600 2 to 561   tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
DA063698 cerebellum .l 60 to 608 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA070120 cerebellum .l 60 to 643 2 to 584   tiling clone, capped   583/583
(100 %)
1 diff
(99.9 %id)
CR744538 anaplastic oligodendroglioma, brain .l 635 to 1041 1 to 408   tiling clone,   408/466
(87 %)
7 diff
(98.5 %id)
BM906783 ovary (pool of 3) .m 1 to 535 103 to 645 D107H V125A H129T H131P T132H ... tiling clone,   550/1387
(39 %)
30 diff
(97.9 %id)
BM927045 brain .n 1 to 827 1 to 856 exact tiling clone,   856/1109
(77 %)
36 diff
(96.8 %id)
DA079377 cerebellum .n 634 to 1151 2 to 519   tiling clone, capped   518/518
(100 %)
0 diff
(100 %id)
BI824360 pooled brain, lung, testis .o 1 to 647 1 to 644 F39L V41C L42* tiling clone,   644/644
(100 %)
5 diff
(99.3 %id)
TI_57202447   .o 1 to 647 68 to 711 F39L V41C L42*     644/711
(90 %)
7 diff
(99.1 %id)
BI768504 pooled lung and spleen .p 1 to 890 1 to 894 W25G L98W D99T P100L T101P ... tiling clone,   894/1052
(84 %)
25 diff
(97.7 %id)
TI_57178670   .p 1 to 890 63 to 956 W25G L98W D99T P100L T101P ...     894/1114
(80 %)
30 diff
(97.4 %id)
CN311119 embryonic stem cells, cell lines H1, H7, andH9 .q 1 to 693 1 to 693   tiling clone,   693/693
(100 %)
4 diff
(99.5 %id)
CN311116 embryonic stem cells, cell lines H1, H7, andH9 .q 39 to 721 1 to 683   tiling clone,   683/683
(100 %)
4 diff
(99.5 %id)
DB263193 uterus .q 87 to 671 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
DA061187 cerebellum .q 276 to 837 2 to 564 H111P T112H N113Q K114Q F115V ... tiling clone, capped   563/563
(100 %)
3 diff
(99.5 %id)
DB138259 thymus .r 1 to 472 2 to 473   capped   472/472
(100 %)
0 diff
(100 %id)
DB139711 thymus .r 1 to 543 2 to 544 exact tiling clone, capped   543/543
(100 %)
0 diff
(100 %id)
DA947760 Spleen .r 6 to 576 2 to 572 exact tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DB079168 testis .r 11 to 452 2 to 443   capped   442/442
(100 %)
0 diff
(100 %id)
BI063809 uterus_tumor .s 1 to 407 1 to 408   tiling clone,   408/408
(100 %)
6 diff
(98.6 %id)
DB176131 kidney, tumor tissue .s 124 to 704 2 to 583 C26X L27S T28H L29P I31H ... tiling clone, capped   582/582
(100 %)
2 diff
(99.7 %id)
DA004191   .t 1 to 364 2 to 365 exact tiling clone, capped   364/364
(100 %)
0 diff
(100 %id)
DA274256 corpus callosum .u 1 to 552 2 to 553   tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
TI_57148988   .u 151 to 939 32 to 821       790/821
(96 %)
12 diff
(98.6 %id)
BI764368 pooled colon, kidney, stomach .u 152 to 939 1 to 789       789/789
(100 %)
6 diff
(99.3 %id)
BF310103 muscle, rhabdomyosarcoma .u 190 to 850 21 to 669       649/727
(89 %)
40 diff
(94.5 %id)
BE742923 adenocarcinoma cell line, ovary .u 198 to 811 1 to 612       612/613
(99 %)
3 diff
(99.6 %id)
BF316436 brain, neuroblastoma .u 205 to 862 1 to 644       649/664
(97 %)
32 diff
(95.2 %id)
CF141507 CNCAP(3)T-225 cell line, Prostate .u 212 to 661 8 to 452       445/452
(98 %)
9 diff
(98.1 %id)
TI_154172229   .u 212 to 824 80 to 686       607/607
(100 %)
10 diff
(98.4 %id)
BM790402 Ascites, stomach .u 249 to 794 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
CN311117 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .u 276 to 825 1 to 550       550/550
(100 %)
0 diff
(100 %id)
AI902445 breast .u 299 to 478 1 to 173       173/176
(98 %)
17 diff
(90.4 %id)
AI902460 breast .u 304 to 594 14 to 304       291/318
(91 %)
8 diff
(97.5 %id)
CB150460 cervix, Uterine .u 332 to 904 1 to 573   tiling clone,   573/577
(99 %)
1 diff
(99.9 %id)
H70703 liver and spleen .u 358 to 739 1 to 385       385/386
(99 %)
5 diff
(98.8 %id)
BF086702 placenta_normal .u 360 to 682 324 to 1       324/324
(100 %)
3 diff
(99.1 %id)
AW402756 lymph .u 386 to 798 1 to 417       417/417
(100 %)
3 diff
(99.3 %id)
BF733974 amnion_normal .u 389 to 615 226 to 1     Submitted on the opposite strand 226/241
(93 %)
6 diff
(97.6 %id)
ES314525 occipital scalp hair, skin .u 459 to 613 1 to 155       155/155
(100 %)
0 diff
(100 %id)
BU579983 insulinoma, Pancreas .u 467 to 1020 8 to 561   tiling clone,   554/561
(98 %)
8 diff
(98.6 %id)
BF767735 colon_normal .u 500 to 808 14 to 322       307/322
(95 %)
6 diff
(98.2 %id)
BF854730 prostate_normal .u 523 to 785 12 to 274       263/282
(93 %)
11 diff
(96.1 %id)
CB144410 Liver .u 558 to 904 1 to 348       348/349
(99 %)
4 diff
(98.9 %id)
BE547512 cervical carcinoma cell line, cervix .u 574 to 798 1 to 225       225/225
(100 %)
0 diff
(100 %id)
BG165048 hypernephroma, cell line, Kidney .u 755 to 818 1 to 64       64/64
(100 %)
0 diff
(100 %id)
BU579732 insulinoma, Pancreas .u 1110 to 1709 615 to 16 exact tiling clone, AAA   600/600
(100 %)
0 diff
(100 %id)
DA383450 thalamus .va 1 to 556 2 to 557 exact tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
DA491002 brain .va 3 to 546 2 to 545 exact capped   544/544
(100 %)
0 diff
(100 %id)
DA491008.
matches multiple genes
brain .va 3 to 592 2 to 591 exact capped also hits gene ZMIZ1 590/590
(100 %)
0 diff
(100 %id)
DB122364 thymus .va 51 to 626 2 to 577 exact capped   576/576
(100 %)
0 diff
(100 %id)
R07457 liver and spleen .va 329 to 662 1 to 344       344/410
(83 %)
16 diff
(96.1 %id)
AI568516 anaplastic oligodendroglioma, brain .va 533 to 1096 564 to 1   tiling clone,   564/564
(100 %)
0 diff
(100 %id)
AI568538 anaplastic oligodendroglioma, brain .va 547 to 1082 550 to 15   AAA   536/536
(100 %)
0 diff
(100 %id)
BX488884   .vb 1 to 582 1 to 582 exact tiling clone,   582/582
(100 %)
4 diff
(99.4 %id)
AI903535 breast Gene AAAS, variant not shown         This clone was ignored    
BF837510 head_neck Gene AAAS, variant not shown         Suspected internal deletion, this clone was ignored    
AL520605 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized Gene AAAS, variant not shown         This clone was ignored    
AL520606 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized Gene AAAS, variant not shown         This clone was ignored    
BX422097 T cells (Jurkat cell line) Gene AAAS, variant not shown         Suspected internal deletion, this clone was ignored    
BX335619 Placenta Cot 25-normalized Gene AAAS, variant not shown         This clone was ignored    
AV645326 corresponding non cancerous liver tissue Gene AAAS, variant not shown         Suspected internal deletion, this clone was ignored    
AI554886 pooled Gene AAAS, variant not shown         Suspected internal deletion, this clone was ignored    
AW207732   Gene AAAS, variant not shown       AAA This clone was ignored    
AW590611 pooled germ cell tumors Gene AAAS, variant not shown         Suspected internal deletion, this clone was ignored    
BE673415 Prostate Gene AAAS, variant not shown         This clone was ignored    
BF683133 leiomyosarcoma cell line, uterus Gene AAAS, variant not shown         Suspected internal deletion, this clone was ignored    
BI838508 pooled pancreas and spleen Gene AAAS, variant not shown         Suspected internal deletion, this clone was ignored    
BQ222542 melanotic melanoma, skin Gene AAAS, variant not shown         This clone was ignored    
DA613349   Gene AAAS, variant not shown       capped Suspected internal deletion, this clone was ignored    
TI_57163147   Gene AAAS, variant not shown         Suspected internal deletion, this clone was ignored    
CB144787 Liver Gene AAAS, variant not shown         Suspected internal deletion, this clone was ignored    
AV752738 Pituitary Gene AAAS, variant not shown         Suspected internal deletion, this clone was ignored    
TI_153992042   Gene AAAS, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC