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Gene SYDE1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
212 supporting clones for gene SYDE1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA318189 hippocampus .a 1 to 473 2 to 474   tiling clone, capped   473/473
(100 %)
0 diff
(100 %id)
DB099645 testis .a 32 to 498 103 to 569   capped   467/568
(82 %)
6 diff
(99.0 %id)
DA370437 thalamus .a 33 to 553 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
DA406986 thalamus .a 35 to 473 2 to 440   capped   439/439
(100 %)
0 diff
(100 %id)
DA855599 placenta .a 35 to 596 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
AK123686   .a 36 to 3289 1 to 3254 exact tiling clone, available from FLJ,   3254/3254
(100 %)
5 diff
(99.9 %id)
NM_033025.4   .a 36 to 3289 1 to 3254 exact RefSeq,   3254/3254
(100 %)
5 diff
(99.9 %id)
DA446016 tongue, tumor tissue .a 37 to 602 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA477772   .a 37 to 513 2 to 481   capped   477/480
(99 %)
3 diff
(99.4 %id)
DA550987   .a 37 to 553 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
DA650438   .a 37 to 479 2 to 444   capped   443/443
(100 %)
0 diff
(100 %id)
DA655061   .a 37 to 601 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA658138   .a 37 to 529 2 to 494   capped   493/493
(100 %)
2 diff
(99.6 %id)
DA658151   .a 37 to 529 2 to 494   capped   493/493
(100 %)
2 diff
(99.6 %id)
DA715686   .a 37 to 584 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA727211   .a 37 to 618 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA852342 placenta .a 37 to 589 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA855399 placenta .a 37 to 575 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA859389 placenta .a 37 to 563 2 to 528   capped   527/528
(99 %)
2 diff
(99.7 %id)
DA863346 placenta .a 37 to 686 2 to 652   capped   651/651
(100 %)
3 diff
(99.6 %id)
DA936445 Spleen .a 37 to 642 2 to 607   capped   606/606
(100 %)
0 diff
(100 %id)
DA389950 thalamus .a 39 to 623 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA659451   .a 39 to 529 2 to 493   capped   492/492
(100 %)
1 diff
(99.8 %id)
DA661145   .a 39 to 593 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB167169 kidney, tumor tissue .a 39 to 498 2 to 461   capped   460/468
(98 %)
1 diff
(99.8 %id)
CO246055 Chondrosarcoma Lung Metastasis cell lines, lung .a 48 to 728 1 to 674       674/810
(83 %)
14 diff
(98.3 %id)
DB130723 thymus .a 50 to 613 2 to 565   capped   564/565
(99 %)
1 diff
(99.9 %id)
TI_154196924   .a 51 to 848 10 to 804       795/1119
(71 %)
23 diff
(98.0 %id)
TI_154186811   .a 52 to 1046 49 to 1030       982/1063
(92 %)
35 diff
(96.8 %id)
CN370335 embryonic stem cells, cell lines H1, H7, andH9 .a 56 to 659 1 to 604       604/604
(100 %)
3 diff
(99.6 %id)
TI_154197308   .a 61 to 873 98 to 901       804/986
(81 %)
16 diff
(98.4 %id)
TI_154195676   .a 76 to 631 76 to 629       554/1104
(50 %)
44 diff
(96.1 %id)
AL120991 melanoma (MeWo cell line) .a 77 to 477 1 to 399       399/399
(100 %)
4 diff
(99.0 %id)
DA286782 corpus callosum .a 82 to 642 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
CN370336 embryonic stem cells, cell lines H1, H7, andH9 .a 87 to 713 1 to 629       629/629
(100 %)
2 diff
(99.7 %id)
BX417911 placenta .a 155 to 1137 1 to 974       972/978
(99 %)
24 diff
(97.6 %id)
CN370334 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 537 to 1213 1 to 678       678/678
(100 %)
5 diff
(99.3 %id)
AI751461 Bone, Hip .a 544 to 999 9 to 464       456/464
(98 %)
6 diff
(98.8 %id)
CO396492 Chondrosarcoma Lung Metastasis cell lines, lung .a 607 to 1143 1 to 538       538/653
(82 %)
17 diff
(97.4 %id)
BF305306 muscle, rhabdomyosarcoma .a 712 to 1484 1 to 781       781/810
(96 %)
20 diff
(97.6 %id)
BU186090 epidermoid carcinoma, cell line, salivary gland .a 796 to 1358 1 to 567       567/1092
(51 %)
7 diff
(99.4 %id)
BQ668484 epidermoid carcinoma, cell line, salivary gland .a 796 to 1246 1 to 459       459/911
(50 %)
14 diff
(98.5 %id)
BM462004 leiomyosarcoma, uterus .a 813 to 1484 1 to 675       675/885
(76 %)
8 diff
(99.1 %id)
CF272273 Brain glioblastoma .a 827 to 1333 1 to 517       517/901
(57 %)
28 diff
(96.9 %id)
BX431417 placenta .a 910 to 1828 1 to 919       919/919
(100 %)
10 diff
(99.0 %id)
BI045951 prostate_normal .a 993 to 1531 1 to 546       546/562
(97 %)
36 diff
(93.6 %id)
BI047040 prostate_normal .a 1010 to 1558 10 to 556       547/556
(98 %)
15 diff
(97.4 %id)
CO247612 Chondrosarcoma Lung Metastasis cell lines, lung .a 1044 to 1526 1 to 484       484/715
(67 %)
13 diff
(98.2 %id)
DA021369   .a 1129 to 1659 2 to 534   capped   533/533
(100 %)
3 diff
(99.5 %id)
BG026374 Bone, osteosarcoma, cell line .a 1140 to 1870 15 to 748       734/1056
(69 %)
33 diff
(96.9 %id)
DA836493 placenta .a 1236 to 1723 2 to 489   capped   488/488
(100 %)
0 diff
(100 %id)
TI_57150777   .a 1353 to 2095 27 to 762       736/762
(96 %)
22 diff
(97.2 %id)
BI762729 pooled colon, kidney, stomach .a 1361 to 2095 1 to 728       728/728
(100 %)
17 diff
(97.7 %id)
TI_154197713   .a 1379 to 2318 64 to 975   tiling clone,   912/1066
(85 %)
63 diff
(94.1 %id)
BG014829 placenta_normal .a 1397 to 1710 19 to 339       319/343
(93 %)
23 diff
(93.3 %id)
TI_154196081   .a 1398 to 2305 13 to 912       900/1037
(86 %)
37 diff
(96.5 %id)
BG005750 placenta_normal .a 1413 to 1710 302 to 4       299/302
(99 %)
1 diff
(99.7 %id)
BX332319 Neuroblastoma Cot 25-normalized .a 1433 to 2496 1 to 1054       1054/1102
(95 %)
23 diff
(98.0 %id)
CA397878 eye, RPE/choroid .a 1496 to 2071 1 to 576       576/576
(100 %)
0 diff
(100 %id)
BF310131 muscle, rhabdomyosarcoma .a 1514 to 2138 1 to 598   available from MGC,   598/694
(86 %)
51 diff
(92.7 %id)
TI_1948140455   .a 1526 to 2273 881 to 125       757/1433
(52 %)
32 diff
(97.8 %id)
AK023573 placenta .a 1561 to 3285 1 to 1724   tiling clone, available from FLJ,   1724/1724
(100 %)
4 diff
(99.8 %id)
AU136918 placenta .a 1562 to 2241 2 to 688   capped   687/831
(82 %)
15 diff
(98.2 %id)
TI_1948141128   .a 1572 to 2273 837 to 133       705/1346
(52 %)
17 diff
(98.8 %id)
TI_1948140786   .a 1574 to 2273 840 to 136       660/1317
(50 %)
21 diff
(98.5 %id)
AI076283 liver and spleen .a 1583 to 1946 408 to 45       364/408
(89 %)
0 diff
(100 %id)
BU508752 leiomyosarcoma, uterus .a 1592 to 2384 1 to 810       810/975
(83 %)
33 diff
(96.7 %id)
BF685864 leiomyosarcoma cell line, uterus .a 1617 to 2319 1 to 699       699/922
(75 %)
9 diff
(99.1 %id)
TI_1948141461   .a 1644 to 2273 762 to 130       633/1383
(45 %)
10 diff
(99.3 %id)
BU600914 mixed (pool of 40 RNAs) .a 1663 to 2495 1 to 841       841/841
(100 %)
19 diff
(97.8 %id)
TI_1948140456   .a 1689 to 2273 719 to 134       586/1328
(44 %)
8 diff
(99.4 %id)
TI_1948140785   .a 1689 to 2273 713 to 124       590/1471
(40 %)
22 diff
(98.6 %id)
BU147073 eye, normal pigmented retinal epithelium .a 1701 to 2566 1 to 874       874/897
(97 %)
25 diff
(97.3 %id)
BU166010 melanotic melanoma, skin .a 1794 to 2644 1 to 866       866/872
(99 %)
24 diff
(97.3 %id)
BF339476 brain, glioblastoma with EGFR amplification .a 1847 to 2593 1 to 738       738/829
(89 %)
19 diff
(97.8 %id)
BM809613 amelanotic melanoma, cell line, skin .a 1866 to 2853 1 to 996       996/1072
(92 %)
18 diff
(98.4 %id)
BE876589 large cell carcinoma, undifferentiated, lung .a 1872 to 2500 1 to 632       632/632
(100 %)
15 diff
(97.7 %id)
BE383218 brain, neuroblastoma .a 1887 to 2556 1 to 664       664/723
(91 %)
6 diff
(99.2 %id)
BI257718 cervical carcinoma cell line, cervix .a 1921 to 2635 1 to 714       714/716
(99 %)
8 diff
(98.9 %id)
BI061524 uterus_tumor .a 1957 to 2460 1 to 504       504/504
(100 %)
1 diff
(99.9 %id)
BF920762 nervous_tumor .a 2014 to 2333 11 to 329       319/394
(80 %)
4 diff
(99.0 %id)
CO249516 Chondrosarcoma Lung Metastasis cell lines, lung .a 2057 to 2555 38 to 530       493/732
(67 %)
17 diff
(97.7 %id)
AW802160 uterus .a 2094 to 2459 1 to 367       367/367
(100 %)
10 diff
(97.3 %id)
BM916657 amelanotic melanoma, cell line, skin .a 2095 to 2888 10 to 807       798/1064
(75 %)
8 diff
(99.3 %id)
BU169236 epidermoid carcinoma, cell line, salivary gland .a 2113 to 2917 1 to 803       803/833
(96 %)
11 diff
(98.7 %id)
BQ231373 melanotic melanoma, skin .a 2128 to 2934 1 to 817       817/873
(93 %)
25 diff
(97.2 %id)
BF999357 placenta_normal .a 2140 to 2436 309 to 13       297/318
(93 %)
0 diff
(100 %id)
BG000730 placenta_normal .a 2163 to 2643 486 to 9       478/486
(98 %)
0 diff
(100 %id)
BE763809 nervous_tumor .a 2206 to 2731 553 to 28       526/559
(94 %)
0 diff
(100 %id)
BF915399 uterus_tumor .a 2272 to 2664 16 to 408       393/408
(96 %)
8 diff
(98.1 %id)
BI055544 placenta_normal .a 2272 to 2754 2 to 484       483/485
(99 %)
7 diff
(98.6 %id)
BF915394 uterus_tumor .a 2276 to 2664 1 to 387       387/404
(95 %)
7 diff
(98.3 %id)
BF915398 uterus_tumor .a 2276 to 2656 393 to 14     Submitted on the opposite strand 380/393
(96 %)
0 diff
(100 %id)
BE763729 nervous_tumor .a 2278 to 2731 479 to 26       454/479
(94 %)
0 diff
(100 %id)
BG169427 hypernephroma, cell line, Kidney .a 2283 to 2927 1 to 646       646/941
(68 %)
19 diff
(98.0 %id)
BI056402 placenta_normal .a 2284 to 2713 454 to 21       434/470
(92 %)
0 diff
(100 %id)
BF935858 nervous_tumor .a 2296 to 2664 369 to 1     Submitted on the opposite strand 369/377
(97 %)
0 diff
(100 %id)
R06948 liver and spleen .a 2297 to 2620 1 to 336       336/373
(90 %)
24 diff
(93.6 %id)
AI905543 breast .a 2300 to 2671 11 to 378       368/381
(96 %)
6 diff
(98.5 %id)
BG896595 cartilage .a 2362 to 2777 95 to 511   tiling clone,   417/434
(96 %)
6 diff
(98.7 %id)
BX108359 placenta .a 2421 to 2553 22 to 154       133/154
(86 %)
6 diff
(96.2 %id)
R77097 placenta .a 2422 to 2882 1 to 474       474/514
(92 %)
28 diff
(94.6 %id)
BG012782 placenta_normal .a 2426 to 2912 485 to 9       477/485
(98 %)
0 diff
(100 %id)
R22090 placenta .a 2445 to 2819 1 to 384       384/394
(97 %)
18 diff
(95.5 %id)
R32983 placenta .a 2445 to 2854 1 to 423       423/424
(99 %)
24 diff
(94.4 %id)
BE936531 nervous_tumor .a 2488 to 2731 252 to 9       244/252
(96 %)
0 diff
(100 %id)
BG004410 placenta_normal .a 2504 to 2921 11 to 427       417/437
(95 %)
26 diff
(94.1 %id)
AA031742.
matches multiple genes
uterus .a 2511 to 2911 1 to 403     also hits gene LPIN2 403/408
(98 %)
14 diff
(96.6 %id)
BI054024 placenta_normal .a 2614 to 2754 1 to 141       141/151
(93 %)
3 diff
(98.1 %id)
AU156933 placenta .a 2748 to 3285 526 to 1       526/542
(97 %)
32 diff
(94.1 %id)
DB318292   .a 2751 to 3289 539 to 1       539/539
(100 %)
3 diff
(99.5 %id)
BQ319389 colon .a 2753 to 2914 162 to 3   tiling clone,   160/164
(97 %)
0 diff
(100 %id)
AK315453 lung .b 1 to 2036 1 to 2036 Q318L tiling clone,   2036/2036
(100 %)
1 diff
(100.0 %id)
DA585253 lung .b 2 to 551 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
BC029926 Cervix, carcinoma .b 18 to 3057 1 to 3039 exact tiling clone, available from MGC, AAA   3039/3039
(100 %)
2 diff
(100.0 %id)
TI_1948140454   .b 28 to 703 128 to 805       678/1281
(52 %)
46 diff
(96.5 %id)
TI_1948140783   .b 28 to 517 125 to 614       490/1478
(33 %)
17 diff
(98.9 %id)
TI_1948140784   .b 28 to 625 127 to 727       601/1350
(44 %)
29 diff
(97.9 %id)
TI_1948141125   .b 28 to 481 119 to 572       454/1381
(32 %)
12 diff
(99.2 %id)
TI_1948141126   .b 28 to 671 131 to 771       641/1353
(47 %)
27 diff
(98.1 %id)
TI_1948141458   .b 28 to 515 123 to 611       489/1358
(36 %)
13 diff
(99.1 %id)
TI_1948141459   .b 28 to 610 132 to 720       589/1443
(40 %)
22 diff
(98.5 %id)
CV030327 mixed .b 30 to 685 1 to 656       656/662
(99 %)
1 diff
(99.9 %id)
BC018942 Muscle, rhabdomyosarcoma .b 1195 to 3057 1 to 1862   available from MGC, AAA   1862/1862
(100 %)
3 diff
(99.9 %id)
BM471755 melanotic melanoma, skin .b 1878 to 2706 1 to 835       835/1042
(80 %)
10 diff
(99.1 %id)
R36514 placenta .b 2184 to 2585 1 to 409       409/462
(88 %)
26 diff
(94.4 %id)
R77863 placenta .b 2184 to 2679 1 to 499       499/500
(99 %)
23 diff
(95.4 %id)
TI_154128152   .b 2196 to 3047 944 to 102   AAA   843/982
(85 %)
22 diff
(97.8 %id)
TI_149311227   .b 2243 to 3047 910 to 119   AAA   792/896
(88 %)
20 diff
(97.8 %id)
TI_153956354   .b 2265 to 2735 79 to 556   fully sequenced,   478/478
(100 %)
11 diff
(97.7 %id)
R08378 liver and spleen .b 2283 to 2629 1 to 358   tiling clone,   358/369
(97 %)
19 diff
(94.9 %id)
W72811 heart .b 2296 to 2684 1 to 401   fully sequenced,   401/401
(100 %)
14 diff
(96.6 %id)
W42611 senescent fibroblast .b 2315 to 2683 1 to 368       368/368
(100 %)
11 diff
(97.1 %id)
TI_151725030   .b 2345 to 3047 840 to 146   AAA   695/869
(79 %)
70 diff
(92.0 %id)
TI_149287571   .b 2354 to 3047 769 to 75   AAA   695/1113
(62 %)
5 diff
(99.6 %id)
TI_149286507   .b 2358 to 3047 784 to 96   AAA   689/690
(99 %)
4 diff
(99.5 %id)
BM972868 lung .b 2364 to 3047 703 to 19   AAA   685/685
(100 %)
4 diff
(99.5 %id)
BU627644 Bone, Enchondroma cell line .b 2366 to 3047 703 to 19   AAA   685/687
(99 %)
5 diff
(99.3 %id)
BG012271 placenta_normal .b 2374 to 2696 1 to 321       321/321
(100 %)
11 diff
(96.6 %id)
CA417385 Chondrosarcoma Cell line .b 2374 to 3047 694 to 19   AAA   676/676
(100 %)
7 diff
(99.0 %id)
BG012273 placenta_normal .b 2376 to 2695 325 to 7       319/325
(98 %)
0 diff
(100 %id)
BM972074 lung .b 2378 to 3047 687 to 19   AAA   669/669
(100 %)
2 diff
(99.8 %id)
BF823569 kidney_tumor .b 2413 to 2696 284 to 1     Submitted on the opposite strand 284/284
(100 %)
5 diff
(98.3 %id)
BQ010378 Chondrosarcoma, Left Pubic Bone .b 2439 to 3060 641 to 19   AAA   623/623
(100 %)
4 diff
(99.4 %id)
BQ446650 Knee, Osteoarthritic Cartilage .b 2440 to 3057 640 to 19   AAA   622/622
(100 %)
6 diff
(99.1 %id)
AL133698 amygdala .b 2442 to 3046 625 to 20   AAA   606/606
(100 %)
6 diff
(99.1 %id)
BU689282 lung .b 2442 to 3047 624 to 19   AAA   606/606
(100 %)
6 diff
(99.1 %id)
BY795659 eye .b 2447 to 3018 1 to 571       571/571
(100 %)
3 diff
(99.5 %id)
BP317562 pericardium .b 2468 to 2983 1 to 513       513/582
(88 %)
12 diff
(98.0 %id)
BQ182591 Knee, Osteoarthritic Cartilage .b 2481 to 3051 590 to 19   AAA   572/572
(100 %)
6 diff
(99.0 %id)
BU632844 cell lines, Chondrosarcoma .b 2482 to 3047 586 to 19   AAA   568/568
(100 %)
5 diff
(99.2 %id)
BM727947 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2526 to 3060 1 to 537   tiling clone, AAA   537/537
(100 %)
5 diff
(99.1 %id)
BF194914 Kidney .b 2542 to 3059 518 to 1       518/518
(100 %)
3 diff
(99.5 %id)
AI189343 placenta .b 2559 to 3047 493 to 7       487/493
(98 %)
0 diff
(100 %id)
AI498248 anaplastic oligodendroglioma, brain .b 2564 to 3057 492 to 1       492/492
(100 %)
4 diff
(99.2 %id)
T51251 placenta .b 2577 to 3047 480 to 3       478/484
(98 %)
0 diff
(100 %id)
AI192799 lung .b 2587 to 3051 475 to 12   AAA   464/464
(100 %)
4 diff
(99.2 %id)
AW082676 pooled .b 2587 to 3051 476 to 12   AAA   465/465
(100 %)
5 diff
(99.0 %id)
AI654357 pooled germ cell tumors .b 2588 to 3047 460 to 2       459/460
(99 %)
0 diff
(100 %id)
AI691081 colon, colonic mucosa from 5 ulcerative colitispatients .b 2589 to 3047 484 to 24   AAA   461/461
(100 %)
0 diff
(100 %id)
AI521921 Kidney .b 2596 to 3052 459 to 4       456/459
(99 %)
0 diff
(100 %id)
AI248058 liver and spleen .b 2609 to 3052 437 to 3       435/438
(99 %)
0 diff
(100 %id)
AI471955 pooled .b 2615 to 3050 438 to 2       437/438
(99 %)
0 diff
(100 %id)
AI038901 senescent fibroblast .b 2621 to 3052 438 to 6       433/445
(97 %)
0 diff
(100 %id)
BM511595 insulinoma, Pancreas .b 2627 to 3053 442 to 17   AAA   426/432
(98 %)
2 diff
(99.6 %id)
CK823904 insulinoma, Pancreas .b 2627 to 3024 397 to 1       397/403
(98 %)
4 diff
(99.1 %id)
AI911408 pooled .b 2633 to 3047 431 to 18   AAA   414/414
(100 %)
1 diff
(99.8 %id)
W72812 heart .b 2654 to 3048 399 to 1   fully sequenced,   399/399
(100 %)
6 diff
(98.5 %id)
AA677040 liver and spleen .b 2657 to 3053 404 to 1       404/404
(100 %)
11 diff
(97.3 %id)
AI081398 senescent fibroblast .b 2657 to 3052 403 to 6       398/403
(98 %)
0 diff
(100 %id)
AI277869 placenta .b 2660 to 3053 424 to 32   AAA   393/393
(100 %)
21 diff
(94.7 %id)
AI570677 anaplastic oligodendroglioma, brain .b 2666 to 3047 398 to 18   AAA   381/381
(100 %)
1 diff
(99.8 %id)
BX434452 placenta .b 2674 to 3048 372 to 1       372/409
(90 %)
12 diff
(97.1 %id)
CA427611 Bone, Subchondral Bone .b 2676 to 3047 392 to 19   AAA   374/374
(100 %)
1 diff
(99.8 %id)
BU632848 cell lines, Chondrosarcoma .b 2676 to 3047 393 to 19   AAA   375/375
(100 %)
2 diff
(99.5 %id)
AA434382 ovarian tumor, ovary .b 2680 to 3045 367 to 1       367/367
(100 %)
2 diff
(99.5 %id)
BM687196 eye, optic nerve .b 2685 to 3054 9 to 380       372/385
(96 %)
2 diff
(99.5 %id)
AA723414 heart .b 2686 to 3047 361 to 1       361/361
(100 %)
1 diff
(99.8 %id)
AW304767 brain, three pooled meningiomas .b 2692 to 2824 133 to 1       133/133
(100 %)
0 diff
(100 %id)
AW134866   .b 2696 to 3060 383 to 18   tiling clone, AAA   366/376
(97 %)
1 diff
(99.8 %id)
TI_151739677   .b 2705 to 3055 475 to 121   fully sequenced, AAA   355/355
(100 %)
12 diff
(96.7 %id)
AI198117 anaplastic oligodendroglioma, brain .b 2706 to 3047 346 to 9       338/346
(97 %)
0 diff
(100 %id)
R08325 liver and spleen .b 2709 to 3041 341 to 1       341/341
(100 %)
11 diff
(96.8 %id)
W42422 senescent fibroblast .b 2710 to 3054 351 to 6       346/356
(97 %)
0 diff
(100 %id)
BP396913 pancreatic islet .b 2712 to 3047 1 to 337     Submitted on the opposite strand 337/344
(97 %)
2 diff
(99.5 %id)
AI004015 pooled .b 2712 to 3047 340 to 5       336/340
(98 %)
0 diff
(100 %id)
AI699239 Prostate .b 2713 to 3052 339 to 1       339/350
(96 %)
0 diff
(100 %id)
AA031652 uterus .b 2717 to 3051 345 to 11   AAA   335/335
(100 %)
0 diff
(100 %id)
AI751462 Bone, Hip .b 2721 to 3053 354 to 22   AAA   333/333
(100 %)
0 diff
(100 %id)
BQ772813 Chondrosarcoma Cell line .b 2721 to 3051 349 to 19   AAA   331/331
(100 %)
0 diff
(100 %id)
BI254595 cervical carcinoma cell line, cervix .b 2727 to 3057 1 to 332   AAA   332/332
(100 %)
1 diff
(99.7 %id)
BI254601 cervical carcinoma cell line, cervix .b 2728 to 3057 1 to 330   AAA   330/330
(100 %)
0 diff
(100 %id)
AI031701 brain, glioblastoma (pooled) .b 2747 to 3052 307 to 2       306/307
(99 %)
0 diff
(100 %id)
DW452710 Liver .b 2762 to 2936 17 to 191       175/191
(91 %)
6 diff
(96.9 %id)
R37510 placenta .b 2781 to 3046 273 to 7       267/273
(97 %)
0 diff
(100 %id)
AI468730 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2784 to 3047 264 to 1       264/264
(100 %)
0 diff
(100 %id)
R77769 placenta .b 2797 to 3041 246 to 1       246/246
(100 %)
1 diff
(99.6 %id)
AI248000 liver and spleen .b 2798 to 3052 257 to 3       255/257
(99 %)
0 diff
(100 %id)
AI559356 anaplastic oligodendroglioma, brain .b 2831 to 3047 217 to 1       217/217
(100 %)
1 diff
(99.6 %id)
AA336131 epididymis .b 2844 to 3057 1 to 214       214/214
(100 %)
0 diff
(100 %id)
AW952588   .b 2846 to 3057 1 to 212   AAA   212/212
(100 %)
0 diff
(100 %id)
BI050687 placenta_normal .b 2846 to 3029 196 to 10       187/213
(87 %)
0 diff
(100 %id)
BI050700 placenta_normal .b 2852 to 3022 182 to 12       171/182
(93 %)
0 diff
(100 %id)
AI282036   .b 2866 to 3047 185 to 4       182/185
(98 %)
0 diff
(100 %id)
BX324822 Placenta Cot 25-normalized .b 2874 to 3021 151 to 1       946/976
(96 %)
55 diff
(94.4 %id)
AW196103 adenocarcinoma, Pancreas .b 2891 to 3051 180 to 20   AAA   161/161
(100 %)
5 diff
(96.9 %id)
CN414153 embryonic stem cells, cell lines H1, H7, andH9 .c 1 to 474 1 to 474   tiling clone,   474/474
(100 %)
3 diff
(99.4 %id)
AK128870 uterus .c 366 to 4197 1 to 3832 V352A tiling clone, available from FLJ,   3832/3832
(100 %)
7 diff
(99.9 %id)
DB280143 uterus .c 367 to 821 2 to 456   capped   455/455
(100 %)
0 diff
(100 %id)
BG003865 placenta_normal .c 895 to 1091 1 to 197       197/200
(98 %)
10 diff
(95.0 %id)
DB352428 uterus .c 3636 to 4197 562 to 1   tiling clone,   562/562
(100 %)
5 diff
(99.2 %id)
BP266567 thyroid .d 1 to 571 1 to 569 A168P R169D S170P P171R P172L ... tiling clone,   569/569
(100 %)
4 diff
(99.3 %id)
BP266885 thyroid .d 2 to 387 1 to 386       386/407
(94 %)
1 diff
(99.8 %id)
DB282073 uterus .e 1 to 538 2 to 539 exact tiling clone, capped   538/538
(100 %)
0 diff
(100 %id)
DA859429 placenta .f 1 to 540 2 to 541 exact tiling clone, capped   540/540
(100 %)
0 diff
(100 %id)
AF209931   .g 1 to 1373 1 to 1371 exact tiling clone,   1371/1371
(100 %)
9 diff
(99.4 %id)
BF989010 placenta_normal Gene SYDE1, variant not shown         This clone was ignored    
BF989011 placenta_normal Gene SYDE1, variant not shown         This clone was ignored    
BF995507 placenta_normal Gene SYDE1, variant not shown         This clone was ignored    
DA578383   Gene SYDE1, variant not shown       capped Suspected internal deletion, this clone was ignored    
BP266041 thyroid Gene SYDE1, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C