Nature of Genome:
General Host Type:
Morphology:
|
positive-stranded ssRNA
Plants
not enveloped, rod-shaped |
Family |
00.071. Not unassigned |
|
| |
Taxonomic Structure of the Family |
| |
Family 00.071. Not unassigned
Genus 00.071.0.01. Tobamovirus |
List of Species Demarcation Criteria in the Genus
Tobamoviruses have historically been designated as strains of TMV,
but many of these are now defined as separate species based on nucleotide sequence data.
The criteria demarcating species in the genus are:
Sequence similarity; less than 10% overall nt sequence difference is considered to characterize strains of the same species, although most of the sequenced species have considerably less than 90% sequence identity,
Host range; however many of these viruses have wider and more overlapping host ranges in experimental rather than natural situations,
Antigenic relationships between the CPs.
List of Species in the Genus
The ICTVdB virus code and the viruses. Official virus species names are in italics, CMI/AAB description # ( ). Tentative virus species
names, alternative names ( ), isolates, strains, serotypes, subspecies, or rejected names are not italicized.
Virus codes, virus names, genome sequence accession numbers [ ] and assigned abbreviations ( ), are:
Species, their serotypes, strains and isolates
00.071.0.01.021. | Cucumber fruit mottle mosaic virus | (154) | |
00.071.0.01.021.00.001. | Cucumber fruit mottle mosaic virus | [NC_002633] | (CGMMV) |
00.071.0.01.002.00.001. | Cucumber green mottle mosaic virus-SH | [NC_001801] | (CGMMV-SH) |
00.071.0.01.002.00.002. | Cucumber green mottle mosaic virus-W | [AB015146] | (CGMMV-W) |
00.071.0.01.003. | Frangipani mosaic virus | (196) | |
00.071.0.01.003.00.001. | Frangipani mosaic virus | [AF165884] | (FrMV) |
00.071.0.01.022. | Hibiscus latent Fort Pierce virus |
| |
00.071.0.01.022.00.001. | Hibiscus latent Fort Pierce virus | [AY250831] | (HLFPV) |
00.071.0.01.023. | Hibiscus latent Singapore virus |
| |
00.071.0.01.023.00.001. | Hibiscus latent Singapore virus | [AF395898] | (HLSV) |
00.071.0.01.023.00.001. | Hibiscus latent Singapore virus | [AF395899] | (HLSV) |
00.071.0.01.004. | Kyuri green mottle mosaic virus |
| |
00.071.0.01.004.00.001. | Kyuri green mottle mosaic-C1 | [NC_003610] | (KGMMV-C1) |
00.071.0.01.004.00.002. | Kyuri green mottle mosaic-Yodo | [AB015145] | (KGMMV-Y) |
00.071.0.01.018. | Obuda pepper virus |
| |
00.071.0.01.018.00.001. | Obuda pepper virus | [NC_003852] | (ObPV) |
00.071.0.01.018.00.001. | Obuda pepper virus | [L11665] | (ObPV) |
00.071.0.01.005. | Odontoglossum ringspot virus | (155) | |
00.071.0.01.005.00.001. | Odontoglossum ringspot virus | [U89894] | (ORSV) |
00.071.0.01.005.00.001. | Odontoglossum ringspot virus | [S83257] | (ORSV) |
00.071.0.01.005.00.001. | Odontoglossum ringspot virus | [U34586] | (ORSV) |
00.071.0.01.006. | Paprika mild mottle virus |
| |
00.071.0.01.006.00.001. | Paprika mild mottle virus-J | [NC_004106] | (PMMMV-J) |
00.071.0.01.007. | Pepper mild mottle virus | (330) | |
00.071.0.01.007.00.001. | Pepper mild mottle virus-S | [NC_003630] | (PMMoV-S) |
00.071.0.01.007.00.002. | Pepper mild mottle virus-la | [AJ308228] | (PMMoV-1a) |
00.071.0.01.008. | Ribgrass mosaic virus | (152) | |
00.071.0.01.008.00.001. | Ribgrass mosaic virus | [U69271] | (RMV) |
00.071.0.01.009. | Sammons’s Opuntia virus | (153) | |
00.071.0.01.009.00.001. | Sammons's Opuntia virus |
| (SOV) |
00.071.0.01.010. | Sunn-hemp mosaic virus |
| |
00.071.0.01.010.00.001. | Sunn-hemp mosaic virus | [U47034] | (SHMV) |
00.071.0.01.010.00.001. | Sunn-hemp mosaic virus | [J02413] | (SHMV) |
00.071.0.01.024. | Tobacco latent virus |
| |
00.071.0.01.024.00.001. | Tobacco latent virus | [AY137775] | (TLV) |
00.071.0.01.011. | Tobacco mild green mosaic virus | (351)
| |
00.071.0.01.011.00.002. | Tobacco mild green mosaic virus-Japan | [AB078435] | (TMGMV-J) |
00.071.0.01.011.00.001. | Tobacco mild green mosaic virus-U2 | [NC_001556] | (TMGMV-U2) |
00.071.0.01.012. | Tobacco mosaic virus | (151) | |
00.071.0.01.012.00.001. | Tobacco mosaic virus | [NC_001367] | (TMV) |
00.071.0.01.012.00.001. | Tobacco mosaic virus | [AF395127] | (TMV) |
00.071.0.01.012.00.001. | Tobacco mosaic virus | [AF165190] | (TMV) |
00.071.0.01.012.00.001. | Tobacco mosaic virus | [AJ011933] | (TMV) |
00.071.0.01.012.00.001. | Tobacco mosaic virus | [X68110] | (TMV) |
00.071.0.01.012.00.002. | Tobacco mosaic virus-Rakkyo | [D63809] | (TMV-Rakkyo) |
00.071.0.01.013. | Tomato mosaic virus | (156) | |
00.071.0.01.013.00.001. | Tomato mosaic virus | [NC_002692] | (ToMV) |
00.071.0.01.013.00.001. | Tomato mosaic virus | [X02144] | (ToMV) |
00.071.0.01.013.00.001. | Tomato mosaic virus | [AJ132845] | (ToMV) |
00.071.0.01.013.00.001. | Tomato mosaic virus | [AJ243571] | (ToMV) |
00.071.0.01.013.00.001. | Tomato mosaic virus | [AJ417701] | (ToMV) |
00.071.0.01.013.00.001. | Tomato mosaic virus | [Z92909] | (ToMV) |
00.071.0.01.019. | Turnip vein-clearing virus |
| |
00.071.0.01.019.00.001. | Turnip vein clearing virus | [NC_001873] | (TVCV) |
00.071.0.01.019.00.002. | Turnip vein clearing virus-cr | [Z29370] | (TVCV-cr) |
00.071.0.01.014. | Ullucus mild mottle virus |
| |
00.071.0.01.014.00.001. | Ullucus mild mottle virus |
| (UMMV) |
00.071.0.01.025. | Wasabi mottle virus |
| |
00.071.0.01.025.00.001. | Wasabi mottle virus | [NC_003355] | (WMoV) |
00.071.0.01.015. | Youcai mosaic virus |
| |
00.071.0.01.015.00.001. | Youcai mosaic virus | [NC_004422] | (YoMV) |
00.071.0.01.015.00.002. | Youcai mosaic virus-Cg | [D38444] | (YoMV-Cg) |
00.071.0.01.015.00.003. | (Oilseed rape mosaic virus) |
| |
00.071.0.01.015.00.004. | (Chinese Rape Mosaic Virus) |
| |
00.071.0.01.020. | Zucchini green mottle mosaic virus |
| |
00.071.0.01.020.00.001. | Zucchini green mottle mosaic virus | [NC_003878] | (ZGMMV) |
Tentative Species in the Genus
Similarity with other Taxa
The 124-132 kDa and 181-189 kDa non-structural proteins contain conserved motifs common to the RdRp of many viruses,
and are most similar to the corresponding proteins of Tobacco rattle virus. The 28-31 kDa MP is the prototypical
plant virus MP and resembles MPs of a wide variety of plant viruses, including Tobacco rattle virus. The 17-18 kDa
structural protein share similarities with those of other plant viruses that form rodshaped virions.
Derivation of Names
Tobamo: sigla from tobacco mosaic virus.
References
Collated from VIIIth ICTV Report
Contributed by
Lewandowski, D.J.
Cite this publication as: Index of Viruses - Tobamovirus (2006). In: ICTVdB - The Universal Virus Database, version 4. Büchen-Osmond, C (Ed), Columbia University, New York, USA. http://www.ncbi.nlm.nih.gov/ICTVdb/Ictv/fs_index.htm
Version 4 is based on Virus Taxonomy, Classification and Nomenclature of Viruses, 8th ICTV Report of the International Committee on Taxonomy of Viruses. Fauquet, CM, Mayo, MA, Maniloff, J, Desselberger, U, and Ball, LA (EDS) (2005) Elsevier/Academic Press, pp. 1259.
Additional References
Reference List from the 8th ICTV Report
ICTVdB taxon description
ICTVdB Picture Gallery
References to sequence databases at GenBank and PubMed Central:
PubMed Central References;
nucleotide sequences;
complete genomes
Google Analytics: activity view