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Nature of Genome: |
positive-stranded ssRNA
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Family |
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Taxonomic Structure of the Family |
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Family 00.032. Not assigned |
00.032.0.01. Hordeivirus |
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00.032.0.01.001. Barley stripe mosaic virus |
(BSMV) |
The ICTVdB virus code and the viruses. Official virus species names are in italics. Tentative virus species
names, alternative names ( ), isolates, strains, serotypes, subspecies, or rejected names are not italicized.
Virus codes, virus names, genome sequence accession numbers [ ] and assigned abbreviations ( ), are:
(ALBV) | |||
(BSMV) | |||
(BSMV) | |||
(BSMV) | |||
(LRSV) | |||
(LRSV) | |||
(LRSV) | |||
(PSLV) | |||
(PSLV) | |||
(PSLV) |
None reported.
The hordeivirus replicase sequences are most similar to the pecluvirus, Peanut clump virus (PCV; 65-66 % identity in the RdRp domain), the furovirus Soil borne wheat mosaic virus (SBWMV; 63-67 %), and to the tobravirus, Tobacco rattle virus (TRV; 52-54 %). Besides the hordeiviruses, the TGB MPs are found in allexiviruses, benyviruses, carlaviruses, foveaviruses, furoviruses, pecluviruses, pomoviruses, and potexviruses. The hordeivirus TGB proteins are most similar to PCV proteins, and to those of Potato mop-top virus and Beet soil-borne virus. However, SBWMV and TRV lack the TGB, and encode single MPs unrelated to the TGB proteins. Moreover, in the other TGB-containing viruses, the replicase sequences are only distantly related to those of hordeiviruses. Apparently, reassortment events during evolution have resulted in different phylogenetic trees of hordeivirus TGB MPs and replication-associated proteins. The hordeivirus yb proteins show significant similarity to the respective proteins of SBWMV and PCV, and have a marginal similarity to the cysteine-rich proteins of tobraviruses. The hordeivirus CP sequences are most closely related to CP of PCV. Taking into account the high degree of sequence similarity of the encoded proteins and some common features of genome organization, the hordeiviruses are most closely related to PCV.
hordei from hordeus, latin name of Barley, the primary host of the type species virus of the genus.
Collated from VIIIth ICTV Report
Bragg, J.N., Solovyev, A.G., Morozov, S. Yu, Atabekov, J.G. Jackson, A.O.
Version 4 is based on Virus Taxonomy, Classification and Nomenclature of Viruses, 8th ICTV Report of the International Committee on Taxonomy of Viruses. Fauquet, CM, Mayo, MA, Maniloff, J, Desselberger, U, and Ball, LA (EDS) (2005) Elsevier/Academic Press, pp. 1259.
Comments to ICTVdB
Management
by Cornelia
Büchen-Osmond
Copyright © 2002 International Committee on Taxonomy of Viruses. All rights reserved.