Nature of Genome:
General Host Type:
Morphology:
|
positive-stranded ssRNA
Plants
not enveloped, filamentous
|
List of Species Demarcation Criteria in the Genus
The criteria demarcating species in the genus are:
Particle size,
Size of CP, as determined by deduced amino acid sequence data,
Serological specificity using discriminatory monoclonal or polyclonal antibodies,
Genome structure and organization (number and relative location of the ORFs),
Amino acid sequence of relevant gene products (CP, CPm, HSP70h) differing by more than 10%,
Vector species and specificity,
Magnitude and specificity of natural and experimental host range,
Cytopathological features (i.e., aspect of inclusion bodies and origin of cytoplasmic vesicles).
List of Species in the Genus
The ICTVdB virus code and the viruses. Official virus species names are in italics, CMI/AAB description # ( ). Tentative virus species
names, alternative names ( ), isolates, strains, serotypes, subspecies, or rejected names are not italicized.
Virus codes, virus names, genome sequence accession numbers [ ] and assigned abbreviations ( ), are:
Species, their serotypes, strains and isolates
Tentative Species in the Genus
00.017.0.81.014. | Clover yellows virus |
| |
00.017.0.81.014.00.001. | Clover yellows virus |
| (CYV) |
00.017.0.81.016. | Dendrobium vein necrosis virus |
| |
00.017.0.81.016.00.001. | Dendrobium vein necrosis virus |
| (DVNV) |
00.017.0.81.018. | Festuca necrosis virus |
| |
00.017.0.81.018.00.001. | Festuca necrosis virus |
| (FNV) |
00.017.0.81.019. | Heracleum virus 6 |
| |
00.017.0.81.019.00.001. | Heracleum virus 6 |
| (HV-6) |
List of Species Demarcation Criteria in the Genus
The criteria demarcating species in the genus are:
Particle size,
Size of CP, as determined by deduced as sequence data,
Serological specificity using discriminatory monoclonal or polyclonal antibodies,
Genome structure and organization (number and relative location of the ORFs),
Amino acid sequence of relevant gene products (CP, CPm, HSP70h) differing by more than 1070,
Vector species and specificity,
Magnitude and specificity of natural and experimental host range,
Cytopathological features (i.e., aspect of inclusion bodies and origin of cytoplasmic vesicles).
List of Species in the Genus
The ICTVdB virus code and the viruses. Official virus species names are in italics, CMI/AAB description # ( ). Tentative virus species
names, alternative names ( ), isolates, strains, serotypes, subspecies, or rejected names are not italicized.
Virus codes, virus names, genome sequence accession numbers [ ] and assigned abbreviations ( ), are:
Species, their serotypes, strains and isolates
00.017.0.03.002. | Grapevine leafroll-associated virus 1 |
| |
00.017.0.03.002.00.001. | Grapevine leafroll-associated virus 1 | [AF195822] | (GLRaV-1) |
00.017.0.03.003. | Grapevine leafroll-associated virus 3 |
| |
00.017.0.03.003.00.001. | Grapevine leafroll-associated virus 3 | [U82937] | (GLRaV-3) |
00.017.0.03.009. | Grapevine leafroll-associated virus 5 |
| |
00.017.0.03.009.00.001. | Grapevine leafroll-associated virus 5 | [AF039552] | (GLRaV-5) |
00.017.0.03.004. | Little cherry virus 2 |
| |
00.017.0.03.004.00.002. | Little cherry virus 2, USA6b | [AF 531505] | (LChV-2) |
00.017.0.03.004.00.001. | Little cherry virus 2 | [AF333237] | (LChV-2) |
00.017.0.03.004.00.003. | Little cherry virus 2, LC5 | [AF416335] | (LChV-2) |
00.017.0.03.005. | Pineapple mealybug wilt-associated virus 1 |
| |
00.017.0.03.005.00.001. | Pineapple mealybug wilt-associated virus 1 | [AF414119] | (PMWaV-1) |
00.017.0.03.006. | Pineapple mealybug wilt-associated virus 2 |
| |
00.017.0.03.006.00.001. | Pineapple mealybug wilt-associated virus 2 | [AF283103] | (PMWaV-2) |
Tentative Species in the Genus
1. Mealybug-transmitted | |
| |
00.017.0.83.011. | Sugarcane mild mosaic virus |
| |
00.017.0.83.011.00.001. | Sugarcane mild mosaic virus |
| (SMMV) |
2. Vector unkown | |
| |
00.017.0.83.008. | Grapevine leafroll-associated virus 4 |
| |
00.017.0.83.008.00.001. | Grapevine leafroll-associated virus 4 | [AF039553] | (GLRaV-4) |
00.017.0.83.012. | Grapevine leafroll-associated virus 6 |
| |
00.017.0.83.012.00.001. | Grapevine leafroll-associated virus 6 | [AJ496796] | (GLRaV-6) |
00.017.0.83.010. | Grapevine leafroll-associated virus 8 |
| |
00.017.0.83.010.00.001. | Grapevine leafroll-associated virus 8 |
| (GLRaV-8) |
00.017.0.03.007. | Plum bark necrosis and stem pitting-associated virus |
| |
00.017.0.03.007.00.001. | Plum bark necrosis and stem pitting-associated virus | [AF195501] | (PBNSTaV) |
List of Species Demarcation Criteria in the Genus
The criteria demarcating species in the genus are:
Particle size,
Size of CP, as determined by deduced amino acid sequence data,
Serological specificity using discriminatory monoclonal or polyclonal antibodies,
Genome structure and organization (number and relative location of the ORFs),
Amino acid sequence of relevant gene products (CP, CPm, HSP70h) differing by more than 10%,
Vector species and specificity,
Magnitude and specificity of natural and experimental host range,
Cytopathological features (i.e., aspect of inclusion bodies and origin of cytoplasmic vesicles).
List of Species in the Genus
The ICTVdB virus code and the viruses. Official virus species names are in italics, CMI/AAB description # ( ). Tentative virus species
names, alternative names ( ), isolates, strains, serotypes, subspecies, or rejected names are not italicized.
Virus codes, virus names, genome sequence accession numbers [ ] and assigned abbreviations ( ), are:
Species, their serotypes, strains and isolates
00.017.0.02.002. | Abutilon yellows virus |
| |
00.017.0.02.002.00.001. | Abutilon yellows virus |
| (AbYV) |
00.017.0.02.010. | Beet pseudoyellows virus |
| |
00.017.0.02.010.00.001. | Beet pseudoyellows virus | [Y15568] | (BPYV) |
00.017.0.02.010.00.001. | Beet pseudoyellows virus | [U67447] | (BPYV) |
00.017.0.02.010. | (Beet pseudo-yellows virus) |
| |
00.017.0.02.010. | (Cucumber yellows virus) |
| |
00.017.0.02.010. | (Cucumber chlorotic spot virus) |
| |
00.017.0.02.003. | Cucurbit yellow stunting disorder virus |
| |
00.017.0.02.003.00.001. | Cucurbit yellow stunting disorder virus | RNA2:[AJ439690] | (CYSDV) |
00.017.0.02.003.00.001. | Cucurbit yellow stunting disorder virus | RNA1:[AJ537493] | (CYSDV) |
00.017.0.02.004. | Lettuce chlorosis virus |
| |
00.017.0.02.004.00.001. | Lettuce chlorosis virus |
| (LCV) |
00.017.0.02.005. | Lettuce infectious yellows virus | (369) | |
00.017.0.02.005.00.001. | Lettuce infectious yellows virus | RNA1:[U15440] | (LIYV) |
00.017.0.02.005.00.001. | Lettuce infectious yellows virus | RNA2:[U15441] | (LIYV) |
00.017.0.02.009. | Sweet potato chlorotic stunt virus |
| |
00.017.0.02.009.00.001. | Sweet potato chlorotic stunt virus | RNA1:[AJ428554] | (SPCSV) |
00.017.0.02.009.00.001. | Sweet potato chlorotic stunt virus | RNA2:[AJ428555] | (SPCSV) |
00.017.0.02.009.00.002. | SPCSV, Kenyan isolate | [X80995] | |
00.017.0.02.007. | Tomato chlorosis virus |
| |
00.017.0.02.007.00.001. | Tomato chlorosis virus |
| (ToCV) |
00.017.0.02.008. | Tomato infectious chlorosis virus |
| |
00.017.0.02.008.00.001. | Tomato infectious chlorosis virus |
| (TICV) |
Tentative Species in the Genus
List of Unassigned Viruses in the Family
The species that follow could not be allocated to any of the genera either because the available information is scanty
(Megakepasma mosaic virus; MegMV and Alligatorweed stunting virus; AWSV), or because more molecular
(Olive leaf yellowing-associated virus; OLYaV and Grapevine leafroll-associated virus 7; GLRaV-7) or
biological data (Little cherry virus 1; LChV-1) are needed for unequivocal classification.
The ICTVdB virus code and the viruses. Unclassfied virus species
names, alternative names ( ), isolates, strains, serotypes, subspecies, or rejected names are not italicized.
Virus codes, virus names, genome sequence accession numbers [ ] and assigned abbreviations ( ), are:
Species, their serotypes, strains and isolates
00.017.0.00.013. | Alligatorweed stunting virus |
| |
00.017.0.00.013.00.001. | Alligatorweed stunting virus |
| (AWSV) |
00.017.0.00.011. | Little cherry virus 1 |
| |
00.017.0.00.011.00.001. | Little cherry virus 1 | [Y10237] | (LChV-1) |
00.017.0.00.011.00.001. | Little cherry virus 1 | [NC_001836] | (LChV-1) |
00.017.0.00.023. | Grapevine leafroll-associated virus 7 |
| |
00.017.0.00.023.00.001. | Grapevine leafroll-associated virus 7 | [Y15897] | (GLRaV-7) |
00.017.0.00.025. | Megakepasma mosaic virus |
| |
00.017.0.00.025.00.001. | Megakepasma mosaic virus |
| (MegMV) |
00.017.0.00.030. | Olive leaf yellowing-associated virus |
| |
00.017.0.00.030.00.001. | Olive leaf yellowing-associated virus | [AJ440010] | (OLYaV) |
| |
00.017.0.71.006. | Muskmelon yellows virus |
| |
00.017.0.71.029. | Grapevine corky bark-associated virus |
| |
Similarity with other Taxa
Virions of the genera Capillovirus, Trichovirus, and Vitivirus have the same particle morphology as those
of the family Closteroviridae. However, the sequence of the CP of members of this family has little homology with that of CPs
of viruses in the three above genera, and major differences exist in genome size and organization, and strategy of expression.
Replication-associated proteins (RdRp, Mtr and Hel) contain signature sequences homologous to those of other taxa of the "alpha-like"
supergroup of ssRNA viruses, the closest affinity being with the family Bromoviridae and the genera Tobravirus,
Tobamovirus, and Hordeivirus. The replication strategy, based on polyprotein processing, translational frameshifting,
and multiple sgRNA generation, closely resembles that of viruses in the families Coronaviridae and Arteriviridae.
However, unlike closteroviruses, the RdRp of coronaviruses and arteriviruses belong to the "picorna-like" supergroup of polymerases.
Hence, the transcriptional strategy of members of the family Closteroviridae follows the mechanism of other "alpha-like" viruses,
and is dissimilar from the discontinuous, leader-primed transcription of coronaviruses and arteriviruses.
Derivation of Names
ampelo: from ampelos, Greek for grapevine, the host of the type species of the genus;
clostero: from Greek kloster, 'spindle, thread';
crini: from crinis, Latin for hair, from the appearance of the very long thread-like particles.
References
Collated from VIIIth ICTV Report
Contributed by
Martelli, G.P., Agranovsky, A.A., Bar-Joseph, M., Boscia, D., Candresse, T., Coutts, R.H.A., Dolja, V.V., Falk, B.W., Gonsalves, D., Hu, J.S., Jelkmann, W., Karasev, A.V., Minafra, A., Namba, S., Vetten, H.J., Wisler, C.G. and Yoshikawa, N.
Cite this publication as: Index of Viruses - Closteroviridae (2006). In: ICTVdB - The Universal Virus Database, version 4. Büchen-Osmond, C (Ed), Columbia University, New York, USA. http://www.ncbi.nlm.nih.gov/ICTVdb/Ictv/fs_index.htm
Version 4 is based on Virus Taxonomy, Classification and Nomenclature of Viruses, 8th ICTV Report of the International Committee on Taxonomy of Viruses. Fauquet, CM, Mayo, MA, Maniloff, J, Desselberger, U, and Ball, LA (EDS) (2005) Elsevier/Academic Press, pp. 1259.
Additional References
Reference List from the 8th ICTV Report
ICTVdB taxon description
ICTVdB Picture Gallery
References to sequence databases at GenBank and PubMed Central:
PubMed Central References;
nucleotide sequences;
complete genomes
Google Analytics: activity view